bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0015655
HIT000053501
(
BC050577
)
(Kinesin-like protein KIF16B; Sorting nexin-23;)
genome : 16,252,749 - 16,554,079 (301,331)
query : 1 - 5,109 (5,109/5,161)
25 exons
identity = 0.998
3'(1.000;0.946;0.995)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001752 : Kinesin motor domain
IPR008984 : SMAD/FHA domain
IPR019821 : Kinesin motor domain, conserved site
IPR027640 : Kinesin-like protein
GO :
0003777 : Molecular Function : microtubule motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0005871 : Cellular Component : kinesin complex
0007018 : Biological Process : microtubule-based movement
0008017 : Molecular Function : microtubule binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015655)
HIX0015655
HIT000056219
(
BX647572
)
(Kinesin-like protein KIF16B; Sorting nexin-23;)
genome : 16,252,749 - 16,553,998 (301,250)
query : 1 - 5,180 (5,180/5,215)
26 exons
identity = 0.998
3'(1.000;0.946;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001683 : Phox homologous domain
IPR001752 : Kinesin motor domain
IPR008984 : SMAD/FHA domain
IPR019821 : Kinesin motor domain, conserved site
IPR027640 : Kinesin-like protein
GO :
0003777 : Molecular Function : microtubule motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0005871 : Cellular Component : kinesin complex
0007018 : Biological Process : microtubule-based movement
0008017 : Molecular Function : microtubule binding
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 8, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015655)
HIX0015655
HIT000084892
(
AY166853
)
Representative transcript
(Kinesin-like protein KIF16B; Sorting nexin-23;)
genome : 16,252,749 - 16,554,078 (301,330)
query : 1 - 5,261 (5,261/5,282)
26 exons
identity = 0.998
3'(1.000;0.946;0.995)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001683 : Phox homologous domain
IPR001752 : Kinesin motor domain
IPR008984 : SMAD/FHA domain
IPR019821 : Kinesin motor domain, conserved site
IPR027640 : Kinesin-like protein
GO :
0003777 : Molecular Function : microtubule motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0005871 : Cellular Component : kinesin complex
0007018 : Biological Process : microtubule-based movement
0008017 : Molecular Function : microtubule binding
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 8, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015655)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173753
Mus
sp. (Mouse) : AK033018
Pongo
sp. (Orangutan) : ENSPPYT00000012458
Rattus
sp. (Rat) : ENSRNOT00000036273
Tetraodon
sp. (Tetraodon) : GSTENT00003843001
Takifugu
sp. (Fugu) : SINFRUT00000143504
Monodelphis
sp. (Opossum) : XM_001382077
Equus
sp. (Horse) : XM_001491846
Pan
sp. (Chimpanzee) : XM_514522
Canis
sp. (Dog) : XM_542882
HIX0015655
HIT000209404 (
NM_024704
)
(Kinesin-like protein KIF16B; Sorting nexin-23;)
genome : 16,252,749 - 16,554,079 (301,331)
query : 1 - 5,262 (5,262/5,268)
26 exons
identity = 0.999
3'(1.000;0.946;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 8, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015655)
HIX0015655
HIT000656699 (
NM_001199865
)
(Kinesin-like protein KIF16B isoform 3.)
genome : 16,252,749 - 16,554,079 (301,331)
query : 1 - 5,109 (5,109/5,115)
25 exons
identity = 0.999
3'(1.000;0.946;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 8, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015655)
HIX0015655
HIT000309194 (
ENST00000354981
)
(Kinesin-like protein KIF16B; Sorting nexin-23;)
genome : 16,252,749 - 16,554,078 (301,330)
query : 1 - 5,261 (5,261/5,261)
26 exons
identity = 0.999
3'(1.000;0.946;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 8, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015655)
HIX0015655
HIT000309854 (
ENST00000355755
)
(Kinesin-like protein KIF16B isoform 1.)
genome : 16,252,750 - 16,554,078 (301,329)
query : 1 - 5,170 (5,170/5,170)
25 exons
identity = 0.999
3'(1.000;0.946;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 8, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015655)
HIX0015655
HIT000359283 (
ENST00000378003
)
(Kinesin-like protein KIF16B; Sorting nexin-23;)
genome : 16,252,750 - 16,554,078 (301,329)
query : 1 - 5,137 (5,137/5,137)
25 exons
identity = 0.999
3'(1.000;0.946;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 8, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015655)
HIX0015655
HIT000656700 (
NM_001199866
)
(Kinesin-like protein KIF16B; Sorting nexin-23;)
genome : 16,347,488 - 16,554,079 (206,592)
query : 1 - 4,641 (4,641/4,691)
23 exons
identity = 0.999
3'(1.000;0.946;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 8, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015655)
HIX0015655
HIT000435757
(
BC150261
)
(Kinesin-like protein KIF16B isoform 1.)
genome : 16,347,488 - 16,553,996 (206,509)
query : 1 - 4,558 (4,558/4,608)
23 exons
identity = 0.998
3'(1.000;0.946;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001752 : Kinesin motor domain
IPR008984 : SMAD/FHA domain
IPR019821 : Kinesin motor domain, conserved site
IPR027640 : Kinesin-like protein
GO :
0003777 : Molecular Function : microtubule motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0005871 : Cellular Component : kinesin complex
0007018 : Biological Process : microtubule-based movement
0008017 : Molecular Function : microtubule binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 8, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015655)
HIX0015655
HIT000506202 (
ENST00000408042
)
(Kinesin-like protein KIF16B; Sorting nexin-23;)
genome : 16,347,488 - 16,554,078 (206,591)
query : 1 - 4,640 (4,640/4,640)
23 exons
identity = 0.999
3'(1.000;0.946;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 8, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015655)
HIX0015655
HIT000001305
(
AB046810
)
(Kinesin-like protein KIF16B isoform 1.)
genome : 16,347,488 - 16,553,996 (206,509)
query : 1 - 4,558 (4,558/4,558)
23 exons
identity = 0.998
3'(1.000;0.946;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 8, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015655)
HIX0015655
HIT000020177
(
AK095322
)
(Kinesin-like protein KIF16B; Sorting nexin-23;)
genome : 16,359,813 - 16,554,015 (194,203)
query : 2 - 2,930 (2,929/2,930)
19 exons
identity = 0.997
3'(1.000;0.932;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001752 : Kinesin motor domain
IPR008984 : SMAD/FHA domain
IPR019821 : Kinesin motor domain, conserved site
IPR027640 : Kinesin-like protein
GO :
0003777 : Molecular Function : microtubule motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0005871 : Cellular Component : kinesin complex
0007018 : Biological Process : microtubule-based movement
0008017 : Molecular Function : microtubule binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, cyto_mito 15.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015655)
HIX0015655
HIT000426265
(
AK307399
)
(Kinesin-like protein KIF16B; Sorting nexin-23;)
genome : 16,359,813 - 16,553,962 (194,150)
query : 1 - 2,909 (2,909/2,909)
20 exons
identity = 0.998
3'(1.000;0.946;1.000)5'
coverage = 1.000
InterPro :
IPR000253 : Forkhead-associated (FHA) domain
IPR001752 : Kinesin motor domain
IPR008984 : SMAD/FHA domain
IPR019821 : Kinesin motor domain, conserved site
IPR027640 : Kinesin-like protein
GO :
0003777 : Molecular Function : microtubule motor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0005871 : Cellular Component : kinesin complex
0007018 : Biological Process : microtubule-based movement
0008017 : Molecular Function : microtubule binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 7, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015655)
HIX0040641
HIT000075231
(
AF258585
)
Representative transcript
(PDZ and LIM domain protein 5 isoform i.)
genome : 16,531,793 - 16,533,657 (1,865)
query : 7 - 1,871 (1,865/1,891)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040641)
HIX0174698
HIT000554936 (
ENST00000457002
)
(Conserved hypothetical protein.)
genome : 16,566,978 - 16,567,338 (361)
query : 1 - 361 (361/361)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174698)
HIX0174963
HIT000541075 (
ENST00000443141
)
(50S ribosomal protein L30e-like domain containing protein.)
genome : 16,664,753 - 16,665,049 (297)
query : 1 - 297 (297/297)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 12.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174963)
HIX0174858
HIT000523873 (
ENST00000425939
)
(Conserved hypothetical protein.)
genome : 16,695,489 - 16,711,593 (16,105)
query : 1 - 1,101 (1,101/1,101)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, mito 9, cyto 3.5, cyto_nucl 3.5, nucl 2.5,
pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174858)
HIX0015656
HIT000359223 (
ENST00000377943
)
(U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B'' family protein.)
genome : 16,710,606 - 16,722,421 (11,816)
query : 1 - 1,588 (1,588/1,588)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015656)
HIX0015656
HIT000199956 (
NM_003092
)
(U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B'' family protein.)
genome : 16,710,609 - 16,722,417 (11,809)
query : 1 - 1,681 (1,681/1,692)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015656)
HIX0015656
HIT000319216 (
NM_198220
)
(U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B'' family protein.)
genome : 16,710,609 - 16,722,417 (11,809)
query : 1 - 1,581 (1,581/1,592)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015656)
HIX0015656
HIT000105628 (
ENST00000246071
)
(U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B'' family protein.)
genome : 16,710,629 - 16,722,421 (11,793)
query : 1 - 1,665 (1,665/1,665)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015656)
HIX0015656
HIT000051784
(
BC036737
)
(U2 small nuclear ribonucleoprotein B''; U2 snRNP B'';)
genome : 16,710,673 - 16,721,865 (11,193)
query : 24 - 988 (965/1,028)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.977
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024888 : U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B''
GO :
0000166 : Molecular Function : nucleotide binding
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0017069 : Molecular Function : snRNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015656)
HIX0015656
HIT000038222
(
BC018022
)
Representative transcript
(U2 small nuclear ribonucleoprotein B''; U2 snRNP B'';)
genome : 16,710,657 - 16,721,863 (11,207)
query : 1 - 1,079 (1,079/1,110)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024888 : U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B''
GO :
0000166 : Molecular Function : nucleotide binding
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0017069 : Molecular Function : snRNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015656)
HIX0015656
HIT000582624 (
ENST00000478522
)
(U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B'' family protein.)
genome : 16,710,674 - 16,713,113 (2,440)
query : 1 - 540 (540/540)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015656)
HIX0015656
HIT000431870
(
AK313004
)
(U2 small nuclear ribonucleoprotein B''; U2 snRNP B'';)
genome : 16,710,675 - 16,721,650 (10,976)
query : 1 - 848 (848/848)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024888 : U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B''
GO :
0000166 : Molecular Function : nucleotide binding
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0017069 : Molecular Function : snRNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015656)
HIX0015656
HIT000090575
(
BC022311
)
(U2 small nuclear ribonucleoprotein B''; U2 snRNP B'';)
genome : 16,710,692 - 16,721,839 (11,148)
query : 1 - 1,021 (1,021/1,049)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024888 : U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B''
GO :
0000166 : Molecular Function : nucleotide binding
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0017069 : Molecular Function : snRNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015656)
HIX0015656
HIT000087028
(
BC008311
)
(U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B'' family protein.)
genome : 16,710,704 - 16,717,978 (7,275)
query : 1 - 451 (451/469)
4 exons
identity = 0.998
5'(0.991;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024888 : U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B''
GO :
0000166 : Molecular Function : nucleotide binding
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0017069 : Molecular Function : snRNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015656)
HIX0015656
HIT000194420
(
M15841
)
(U2 small nuclear ribonucleoprotein B''; U2 snRNP B'';)
genome : 16,710,720 - 16,721,862 (11,143)
query : 1 - 1,015 (1,015/1,015)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024888 : U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B''
GO :
0000166 : Molecular Function : nucleotide binding
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0017069 : Molecular Function : snRNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015656)
HIX0015656
HIT000487447
(
AB451234
)
(U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B'' family protein.)
genome : 16,712,348 - 16,721,650 (9,303)
query : 1 - 678 (678/678)
6 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024888 : U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B''
GO :
0000166 : Molecular Function : nucleotide binding
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0017069 : Molecular Function : snRNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015656)
HIX0015656
HIT000487572
(
AB451359
)
(U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B'' family protein.)
genome : 16,712,348 - 16,721,647 (9,300)
query : 1 - 675 (675/675)
6 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR024888 : U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B''
GO :
0000166 : Molecular Function : nucleotide binding
0000398 : Biological Process : mRNA splicing, via spliceosome
0003676 : Molecular Function : nucleic acid binding
0017069 : Molecular Function : snRNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015656)
HIX0015656
HIT000020171
(
AK095316
)
(U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B'' family protein.)
genome : 16,714,550 - 16,718,683 (4,134)
query : 1 - 4,135 (4,135/4,135)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
InterPro :
IPR024888 : U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B''
GO :
0000398 : Biological Process : mRNA splicing, via spliceosome
0017069 : Molecular Function : snRNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 5.5, cyto_nucl 4.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015656)
HIX0040515
HIT000337041
(
BC101688
)
(Otoraplin; Fibrocyte-derived protein; Melanoma inhibitory activity-like protein; Precursor;)
genome : 16,728,998 - 16,731,831 (2,834)
query : 1 - 504 (504/504)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR011511 : Variant SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040515)
HIX0040515
HIT000337043
(
BC101690
)
(Otoraplin; Fibrocyte-derived protein; Melanoma inhibitory activity-like protein; Precursor;)
genome : 16,728,998 - 16,731,831 (2,834)
query : 1 - 504 (504/504)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR011511 : Variant SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040515)
HIX0040515
HIT000105632 (
ENST00000246081
)
(Otoraplin; Fibrocyte-derived protein; Melanoma inhibitory activity-like protein; Precursor;)
genome : 16,729,003 - 16,732,809 (3,807)
query : 1 - 1,477 (1,477/1,477)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040515)
HIX0040515
HIT000207760 (
NM_020157
)
(Otoraplin; Fibrocyte-derived protein; Melanoma inhibitory activity-like protein; Precursor;)
genome : 16,729,003 - 16,732,809 (3,807)
query : 1 - 1,477 (1,477/1,477)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040515)
HIX0040515
HIT000074670
(
AF233261
)
Representative transcript
(Otoraplin; Fibrocyte-derived protein; Melanoma inhibitory activity-like protein; Precursor;)
genome : 16,729,003 - 16,732,231 (3,229)
query : 1 - 846 (846/846)
5 exons
identity = 0.992
5'(1.000;1.000;1.000;1.000;0.983)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR011511 : Variant SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040515)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AF233518
Mus
sp. (Mouse) : AJ243939
Canis
sp. (Dog) : ENSCAFT00000008881
Equus
sp. (Horse) : ENSECAT00000018362
Macaca
sp. (Macaque) : ENSMMUT00000020331
Oryzias
sp. (Medaka) : ENSORLT00000008134
Pongo
sp. (Orangutan) : ENSPPYT00000012460
Pan
sp. (Chimpanzee) : ENSPTRT00000059247
Rattus
sp. (Rat) : XM_001053452
Monodelphis
sp. (Opossum) : XM_001382076
HIX0040515
HIT000253126
(
AY359082
)
(Otoraplin; Fibrocyte-derived protein; Melanoma inhibitory activity-like protein; Precursor;)
genome : 16,729,009 - 16,731,860 (2,852)
query : 1 - 521 (521/521)
4 exons
identity = 0.998
5'(0.993;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR011511 : Variant SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040515)
HIX0040515
HIT000074869
(
AF243505
)
(Otoraplin; Fibrocyte-derived protein; Melanoma inhibitory activity-like protein; Precursor;)
genome : 16,729,040 - 16,732,233 (3,194)
query : 1 - 865 (865/865)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR011511 : Variant SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040515)
HIX0040515
HIT000245476
(
AJ242552
)
(Otoraplin; Fibrocyte-derived protein; Melanoma inhibitory activity-like protein; Precursor;)
genome : 16,729,047 - 16,732,798 (3,752)
query : 1 - 1,422 (1,422/1,422)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR011511 : Variant SH3 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040515)
HIX0040515
HIT000589901 (
ENST00000486129
)
(Otoraplin; Fibrocyte-derived protein; Melanoma inhibitory activity-like protein; Precursor;)
genome : 16,730,005 - 16,732,427 (2,423)
query : 1 - 1,047 (1,047/1,047)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040515)
HIX0040515
HIT000593719 (
ENST00000490148
)
(Hypothetical short protein.)
genome : 16,730,019 - 16,750,707 (20,689)
query : 1 - 571 (571/571)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13, extr 8, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040515)
HIX0174836
HIT000520508 (
ENST00000422574
)
(Hypothetical short protein.)
genome : 16,838,607 - 16,844,793 (6,187)
query : 1 - 833 (833/833)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 7.5, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174836)
HIX0174759
HIT000504322 (
ENST00000402970
)
(Krueppel-associated box domain containing protein.)
genome : 17,168,779 - 17,168,989 (211)
query : 1 - 211 (211/211)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8, mito 4, cyto_pero 4, cyto_plas 4,
cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174759)
HIX0015657
HIT000052425
(
BC040546
)
(Neuroendocrine convertase 2 isoform 3.)
genome : 17,206,752 - 17,465,221 (258,470)
query : 1 - 4,671 (4,671/4,686)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;0.990;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.4.21.94
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR009020 : Proteinase inhibitor, propeptide
IPR015500 : Peptidase S8, subtilisin-related
IPR022398 : Peptidase S8, subtilisin, His-active site
IPR023827 : Peptidase S8, subtilisin, Asp-active site
IPR023828 : Peptidase S8, subtilisin, Ser-active site
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 9.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015657)
HIX0015657
HIT000656810 (
NM_001201528
)
(Neuroendocrine convertase 2 isoform 3.)
genome : 17,206,752 - 17,465,221 (258,470)
query : 1 - 4,672 (4,672/4,687)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.94
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 9.5, cysk 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015657)
HIX0015657
HIT000359179 (
ENST00000377899
)
(Neuroendocrine convertase 2 isoform 3.)
genome : 17,206,752 - 17,465,223 (258,472)
query : 1 - 4,674 (4,674/4,674)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.94
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 9.5, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015657)
HIX0015657
HIT000199483 (
NM_002594
)
(Neuroendocrine convertase 2; NEC 2; EC=3.4.21.94; KEX2-like endoprotease 2; Prohormone convertase 2; Proprotein convertase 2; PC2; Precursor;)
genome : 17,207,597 - 17,465,221 (257,625)
query : 1 - 4,777 (4,777/4,787)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.94
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, lyso 4, nucl 3.5, cyto_nucl 2.5, plas 2,
E.R. 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015657)
HIX0015657
HIT000656811 (
NM_001201529
)
(Neuroendocrine convertase 2 isoform 2 preproprotein.)
genome : 17,207,597 - 17,465,221 (257,625)
query : 1 - 4,672 (4,672/4,682)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.94
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 4.5, lyso 4, cyto_nucl 3, plas 2,
E.R. 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015657)
HIX0015657
HIT000108455 (
ENST00000262545
)
(Neuroendocrine convertase 2; NEC 2; EC=3.4.21.94; KEX2-like endoprotease 2; Prohormone convertase 2; Proprotein convertase 2; PC2; Precursor;)
genome : 17,207,636 - 17,465,223 (257,588)
query : 1 - 4,740 (4,740/4,740)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.94
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, lyso 4, nucl 3.5, cyto_nucl 2.5, plas 2,
E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015657)
HIX0015657
HIT000086110
(
BC001905
)
(Neuroendocrine convertase 2 isoform 2 preproprotein.)
genome : 17,207,670 - 17,462,926 (255,257)
query : 1 - 2,411 (2,411/2,426)
12 exons
identity = 0.999
5'(1.000;1.000;0.983;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.94
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR009020 : Proteinase inhibitor, propeptide
IPR015500 : Peptidase S8, subtilisin-related
IPR022398 : Peptidase S8, subtilisin, His-active site
IPR023827 : Peptidase S8, subtilisin, Asp-active site
IPR023828 : Peptidase S8, subtilisin, Ser-active site
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, lyso 4, nucl 3.5, cyto_nucl 2.5, plas 2,
E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015657)
HIX0015657
HIT000032455
(
BC005815
)
Representative transcript
(Neuroendocrine convertase 2; NEC 2; EC=3.4.21.94; KEX2-like endoprotease 2; Prohormone convertase 2; Proprotein convertase 2; PC2; Precursor;)
genome : 17,207,696 - 17,462,926 (255,231)
query : 1 - 2,383 (2,383/2,402)
12 exons
identity = 1.000
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.94
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR009020 : Proteinase inhibitor, propeptide
IPR015500 : Peptidase S8, subtilisin-related
IPR022398 : Peptidase S8, subtilisin, His-active site
IPR023827 : Peptidase S8, subtilisin, Asp-active site
IPR023828 : Peptidase S8, subtilisin, Ser-active site
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, lyso 4, nucl 3.5, cyto_nucl 2.5, plas 2,
E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015657)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : AB092686
Gallus
sp. (Chicken) : AB121970
Bos
sp. (Cow) : AF186406
Mus
sp. (Mouse) : BC057348
Pongo
sp. (Orangutan) : CR857610
Macaca
sp. (Macaque) : ENSMMUT00000020512
Tetraodon
sp. (Tetraodon) : GSTENT00016397001
Rattus
sp. (Rat) : M76706
Takifugu
sp. (Fugu) : SINFRUT00000162889
Pan
sp. (Chimpanzee) : XM_001138346
Danio
sp. (Zebrafish) : XM_001343725
Monodelphis
sp. (Opossum) : XM_001382075
Equus
sp. (Horse) : XM_001491591
Canis
sp. (Dog) : XM_542880
HIX0015657
HIT000488824
(
AK294200
)
(Neuroendocrine convertase 2 isoform 2 preproprotein.)
genome : 17,207,701 - 17,462,928 (255,228)
query : 1 - 2,275 (2,275/2,275)
11 exons
identity = 1.000
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.94
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR015500 : Peptidase S8, subtilisin-related
IPR022398 : Peptidase S8, subtilisin, His-active site
IPR023827 : Peptidase S8, subtilisin, Asp-active site
IPR023828 : Peptidase S8, subtilisin, Ser-active site
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 4.5, lyso 4, cyto_nucl 3, plas 2,
E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015657)
HIX0015657
HIT000635654 (
ENST00000536609
)
(Neuroendocrine convertase 2 isoform 2 preproprotein.)
genome : 17,207,701 - 17,462,928 (255,228)
query : 1 - 2,275 (2,275/2,275)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.94
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 4.5, lyso 4, cyto_nucl 3, plas 2,
E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015657)
HIX0015657
HIT000431207
(
AK312341
)
(Neuroendocrine convertase 2; NEC 2; EC=3.4.21.94; KEX2-like endoprotease 2; Prohormone convertase 2; Proprotein convertase 2; PC2; Precursor;)
genome : 17,207,773 - 17,462,715 (254,943)
query : 1 - 2,095 (2,095/2,095)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.94
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR009020 : Proteinase inhibitor, propeptide
IPR015500 : Peptidase S8, subtilisin-related
IPR022398 : Peptidase S8, subtilisin, His-active site
IPR023827 : Peptidase S8, subtilisin, Asp-active site
IPR023828 : Peptidase S8, subtilisin, Ser-active site
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, lyso 4, nucl 3.5, cyto_nucl 2.5, plas 2,
E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015657)
HIX0015657
HIT000191325
(
J05252
)
(Neuroendocrine convertase 2; NEC 2; EC=3.4.21.94; KEX2-like endoprotease 2; Prohormone convertase 2; Proprotein convertase 2; PC2; Precursor;)
genome : 17,207,865 - 17,462,925 (255,061)
query : 2 - 2,214 (2,213/2,223)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;1.000;1.000;1.000;1.000)3'
coverage = 0.996
EC number :
EC 3.4.21.94
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR009020 : Proteinase inhibitor, propeptide
IPR015500 : Peptidase S8, subtilisin-related
IPR022398 : Peptidase S8, subtilisin, His-active site
IPR023827 : Peptidase S8, subtilisin, Asp-active site
IPR023828 : Peptidase S8, subtilisin, Ser-active site
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, lyso 4, nucl 3.5, cyto_nucl 2.5, plas 2,
E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015657)
HIX0015657
HIT000574501 (
ENST00000470007
)
(Neuroendocrine convertase 2; NEC 2; EC=3.4.21.94; KEX2-like endoprotease 2; Prohormone convertase 2; Proprotein convertase 2; PC2; Precursor;)
genome : 17,208,776 - 17,389,955 (181,180)
query : 1 - 586 (586/586)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.94
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 13, cyto 6.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015657)
HIX0040737
HIT000260383
(
BC062420
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,337,055 - 17,338,540 (1,486)
query : 1 - 1,486 (1,486/1,501)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 12, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040737)
HIX0015658
HIT000007146
(
AK023872
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,438,273 - 17,440,908 (2,636)
query : 1 - 2,636 (2,636/2,638)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015658)
HIX0015657
HIT000016372
(
AK091505
)
(Neuroendocrine convertase 2; NEC 2; EC=3.4.21.94; KEX2-like endoprotease 2; Prohormone convertase 2; Proprotein convertase 2; PC2; Precursor;)
genome : 17,444,078 - 17,462,932 (18,855)
query : 1 - 2,829 (2,829/2,829)
2 exons
identity = 0.995
5'(0.994;0.999)3'
coverage = 1.000
EC number :
EC 3.4.21.94
InterPro :
IPR000209 : Peptidase S8/S53 domain
IPR002884 : Proprotein convertase, P
IPR008979 : Galactose-binding domain-like
IPR015500 : Peptidase S8, subtilisin-related
GO :
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, mito 6.5, nucl 6, E.R._mito 5.5, cyto 3,
pero 3, lyso 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015657)
HIX0015657
HIT000564822 (
ENST00000459871
)
(Neuroendocrine convertase 2; NEC 2; EC=3.4.21.94; KEX2-like endoprotease 2; Prohormone convertase 2; Proprotein convertase 2; PC2; Precursor;)
genome : 17,444,078 - 17,462,932 (18,855)
query : 1 - 2,825 (2,825/2,825)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.94
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, mito 6.5, nucl 6, E.R._mito 5.5, cyto 3,
pero 3, lyso 3, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015657)
HIX0040722
HIT000096985
(
BC041946
)
Representative transcript
(Hypothetical protein.)
genome : 17,454,133 - 17,457,538 (3,406)
query : 16 - 1,924 (1,909/1,924)
2 exons
identity = 0.998
3'(0.998;0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040722)
HIX0174735
HIT000359854 (
ENST00000378574
)
(Tctex-1 family protein.)
genome : 17,459,730 - 17,460,076 (347)
query : 1 - 347 (347/347)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 5, nucl 4, cyto_mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174735)
HIX0027660
HIT000052559
(
BC041483
)
Representative transcript
(Filensin isoform 2.)
genome : 17,474,550 - 17,539,605 (65,056)
query : 1 - 2,063 (2,063/2,077)
8 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027660)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB003104
Macaca
sp. (Macaque) : AB179461
Mus
sp. (Mouse) : BC057580
Tetraodon
sp. (Tetraodon) : CR701879
Oryzias
sp. (Medaka) : ENSORLT00000008035
Pongo
sp. (Orangutan) : ENSPPYT00000012462
Takifugu
sp. (Fugu) : SINFRUT00000162887
Bos
sp. (Cow) : X72388
Gallus
sp. (Chicken) : X72873
Pan
sp. (Chimpanzee) : XM_001138680
Monodelphis
sp. (Opossum) : XM_001382074
Equus
sp. (Horse) : XM_001494065
Danio
sp. (Zebrafish) : XM_683410
Canis
sp. (Dog) : XM_852335
HIX0027660
HIT000562016 (
NM_001161705
)
(Filensin isoform 2.)
genome : 17,474,550 - 17,539,605 (65,056)
query : 1 - 2,063 (2,063/2,077)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16, cyto 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027660)
HIX0027660
HIT000063487
(
AF039655
)
(Filensin; Beaded filament structural protein 1; Lens fiber cell beaded-filament structural protein CP 115; CP115; Lens intermediate filament-like heavy; LIFL-H;)
genome : 17,474,550 - 17,511,974 (37,425)
query : 1 - 2,167 (2,167/2,180)
8 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
0.995)5'
coverage = 1.000
InterPro :
IPR001664 : Intermediate filament protein
GO :
0005198 : Molecular Function : structural molecule activity
0005882 : Cellular Component : intermediate filament
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027660)
HIX0027660
HIT000198193 (
NM_001195
)
(Filensin; Beaded filament structural protein 1; Lens fiber cell beaded-filament structural protein CP 115; CP115; Lens intermediate filament-like heavy; LIFL-H;)
genome : 17,474,550 - 17,512,013 (37,464)
query : 1 - 2,206 (2,206/2,215)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cysk_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027660)
HIX0027660
HIT000325965
(
Y16717
)
(Filensin; Beaded filament structural protein 1; Lens fiber cell beaded-filament structural protein CP 115; CP115; Lens intermediate filament-like heavy; LIFL-H;)
genome : 17,474,550 - 17,511,974 (37,425)
query : 1 - 2,167 (2,167/2,176)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)5'
coverage = 1.000
InterPro :
IPR001664 : Intermediate filament protein
GO :
0005198 : Molecular Function : structural molecule activity
0005882 : Cellular Component : intermediate filament
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027660)
HIX0027660
HIT000359148 (
ENST00000377868
)
(Filensin isoform 2.)
genome : 17,474,550 - 17,539,605 (65,056)
query : 1 - 2,063 (2,063/2,063)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027660)
HIX0027660
HIT000359153 (
ENST00000377873
)
(Filensin; Beaded filament structural protein 1; Lens fiber cell beaded-filament structural protein CP 115; CP115; Lens intermediate filament-like heavy; LIFL-H;)
genome : 17,474,550 - 17,512,014 (37,465)
query : 1 - 2,207 (2,207/2,207)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cysk_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027660)
HIX0027660
HIT000499297
(
AK304673
)
(Filensin; Beaded filament structural protein 1; Lens fiber cell beaded-filament structural protein CP 115; CP115; Lens intermediate filament-like heavy; LIFL-H;)
genome : 17,474,551 - 17,549,865 (75,315)
query : 1 - 2,183 (2,183/2,183)
10 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 9, cyto_mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027660)
HIX0027660
HIT000635671 (
ENST00000536626
)
(Filensin; Beaded filament structural protein 1; Lens fiber cell beaded-filament structural protein CP 115; CP115; Lens intermediate filament-like heavy; LIFL-H;)
genome : 17,474,551 - 17,549,865 (75,315)
query : 1 - 2,183 (2,183/2,183)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 8, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027660)
HIX0027660
HIT000499860
(
AK316247
)
(Filensin isoform 2.)
genome : 17,474,551 - 17,539,481 (64,931)
query : 3 - 2,075 (2,073/2,075)
9 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 8, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027660)
HIX0027660
HIT000643919 (
ENST00000544874
)
(Filensin isoform 2.)
genome : 17,474,551 - 17,539,483 (64,933)
query : 1 - 2,075 (2,075/2,075)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 8, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027660)
HIX0027660
HIT000595912 (
ENST00000492424
)
(Filensin; Beaded filament structural protein 1; Lens fiber cell beaded-filament structural protein CP 115; CP115; Lens intermediate filament-like heavy; LIFL-H;)
genome : 17,487,473 - 17,492,715 (5,243)
query : 20 - 497 (478/497)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.962
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027660)
HIX0027660
HIT000218098
(
U12622
)
(Filensin; Beaded filament structural protein 1; Lens fiber cell beaded-filament structural protein CP 115; CP115; Lens intermediate filament-like heavy; LIFL-H;)
genome : 17,489,534 - 17,505,557 (16,024)
query : 17 - 378 (362/391)
4 exons
identity = 0.981
3'(0.963;1.000;0.979;0.985)5'
coverage = 0.926
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.5, nucl 11, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027660)
HIX0027660
HIT000577747 (
ENST00000473415
)
(Filensin; Beaded filament structural protein 1; Lens fiber cell beaded-filament structural protein CP 115; CP115; Lens intermediate filament-like heavy; LIFL-H;)
genome : 17,492,637 - 17,549,865 (57,229)
query : 1 - 705 (705/705)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, extr 11, cyto_nucl 11, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027660)
HIX0175040
HIT000555510 (
ENST00000457576
)
(Ubiquitin-like domain containing protein.)
genome : 17,497,488 - 17,497,952 (465)
query : 1 - 465 (465/465)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, nucl 4, cyto_mito 4, cyto_pero 4,
cyto_plas 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175040)
HIX0015659
HIT000105626 (
ENST00000246069
)
(Destrin; Actin-depolymerizing factor; ADF;)
genome : 17,550,508 - 17,588,887 (38,380)
query : 1 - 1,940 (1,940/1,940)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015659)
HIX0015659
HIT000203436 (
NM_006870
)
(Destrin; Actin-depolymerizing factor; ADF;)
genome : 17,550,599 - 17,588,652 (38,054)
query : 1 - 1,614 (1,614/1,614)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5, cyto_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015659)
HIX0015659
HIT000316806 (
NM_001011546
)
(Destrin; Actin-depolymerizing factor; ADF;)
genome : 17,550,599 - 17,588,652 (38,054)
query : 1 - 1,746 (1,746/1,746)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 10, cyto_nucl 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015659)
HIX0015659
HIT000642306 (
ENST00000543261
)
(Destrin; Actin-depolymerizing factor; ADF;)
genome : 17,550,599 - 17,588,652 (38,054)
query : 1 - 1,746 (1,746/1,746)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 10, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015659)
HIX0015659
HIT000499607
(
AK315994
)
(Destrin; Actin-depolymerizing factor; ADF;)
genome : 17,550,693 - 17,587,882 (37,190)
query : 1 - 882 (882/882)
5 exons
identity = 0.998
5'(1.000;0.992;0.997;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR017904 : ADF/Cofilin/Destrin
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
0015629 : Cellular Component : actin cytoskeleton
0030042 : Biological Process : actin filament depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 12, cyto_nucl 8, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015659)
HIX0015659
HIT000034392
(
BC009477
)
(Destrin; Actin-depolymerizing factor; ADF;)
genome : 17,550,697 - 17,587,972 (37,276)
query : 1 - 836 (836/859)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR017904 : ADF/Cofilin/Destrin
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
0015629 : Cellular Component : actin cytoskeleton
0030042 : Biological Process : actin filament depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015659)
HIX0015659
HIT000578329 (
ENST00000474024
)
(Destrin; Actin-depolymerizing factor; ADF;)
genome : 17,550,727 - 17,588,887 (38,161)
query : 1 - 1,853 (1,853/1,853)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 10, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015659)
HIX0015659
HIT000431511
(
AK312645
)
(Destrin; Actin-depolymerizing factor; ADF;)
genome : 17,550,728 - 17,587,791 (37,064)
query : 1 - 624 (624/624)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR017904 : ADF/Cofilin/Destrin
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
0015629 : Cellular Component : actin cytoskeleton
0030042 : Biological Process : actin filament depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015659)
HIX0015659
HIT000547075 (
ENST00000449141
)
(Destrin; Actin-depolymerizing factor; ADF;)
genome : 17,550,735 - 17,587,867 (37,133)
query : 1 - 795 (795/795)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto_nucl 6.5, cyto 6, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015659)
HIX0015659
HIT000055966
(
BX647319
)
Representative transcript
(Destrin isoform b.)
genome : 17,550,760 - 17,588,645 (37,886)
query : 1 - 1,579 (1,579/1,598)
5 exons
identity = 0.999
5'(1.000;1.000;0.997;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR017904 : ADF/Cofilin/Destrin
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
0015629 : Cellular Component : actin cytoskeleton
0030042 : Biological Process : actin filament depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015659)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB025406
Macaca
sp. (Macaque) : AB169824
Danio
sp. (Zebrafish) : AY398323
Bos
sp. (Cow) : BC103074
Tetraodon
sp. (Tetraodon) : CR725149
Equus
sp. (Horse) : ENSECAT00000021304
Pongo
sp. (Orangutan) : ENSPPYT00000012463
Gallus
sp. (Chicken) : J02912
Rattus
sp. (Rat) : NM_001033666
Takifugu
sp. (Fugu) : SINFRUT00000134387
Monodelphis
sp. (Opossum) : XM_001374156
Pan
sp. (Chimpanzee) : XM_514526
Canis
sp. (Dog) : XM_534337
HIX0015659
HIT000216100
(
S65738
)
(Destrin; Actin-depolymerizing factor; ADF;)
genome : 17,550,785 - 17,588,645 (37,861)
query : 4 - 1,425 (1,422/1,452)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 0.979
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR017904 : ADF/Cofilin/Destrin
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
0015629 : Cellular Component : actin cytoskeleton
0030042 : Biological Process : actin filament depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015659)
HIX0138074
HIT000346978 (
ENST00000365390
)
(Hypothetical protein.)
genome : 17,556,851 - 17,557,155 (305)
query : 1 - 305 (305/305)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 8.5, extr_plas 8.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138074)
HIX0015659
HIT000496962
(
AK302338
)
(Destrin; Actin-depolymerizing factor; ADF;)
genome : 17,572,576 - 17,588,120 (15,545)
query : 21 - 977 (957/977)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.980
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR017904 : ADF/Cofilin/Destrin
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
0015629 : Cellular Component : actin cytoskeleton
0030042 : Biological Process : actin filament depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 10, cyto_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015659)
HIX0015659
HIT000427428
(
AK308562
)
(Destrin; Actin-depolymerizing factor; ADF;)
genome : 17,577,343 - 17,588,048 (10,706)
query : 1 - 846 (846/846)
4 exons
identity = 0.998
5'(0.989;0.997;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR017904 : ADF/Cofilin/Destrin
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
0015629 : Cellular Component : actin cytoskeleton
0030042 : Biological Process : actin filament depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 12, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015659)
HIX0174911
HIT000532099 (
ENST00000434165
)
(Small GTPase superfamily protein.)
genome : 17,579,900 - 17,580,452 (553)
query : 1 - 553 (553/553)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6, cyto_nucl 5, nucl 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174911)
HIX0015659
HIT000267892
(
CR457042
)
(Destrin; Actin-depolymerizing factor; ADF;)
genome : 17,581,382 - 17,587,790 (6,409)
query : 3 - 497 (495/498)
3 exons
identity = 0.998
5'(1.000;1.000;0.991)3'
coverage = 0.994
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR017904 : ADF/Cofilin/Destrin
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
0015629 : Cellular Component : actin cytoskeleton
0030042 : Biological Process : actin filament depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015659)
HIX0015659
HIT000268826
(
CR541956
)
(Destrin; Actin-depolymerizing factor; ADF;)
genome : 17,581,382 - 17,587,788 (6,407)
query : 3 - 495 (493/495)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR002108 : Actin-depolymerising factor homology domain
IPR017904 : ADF/Cofilin/Destrin
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
0005622 : Cellular Component : intracellular
0015629 : Cellular Component : actin cytoskeleton
0030042 : Biological Process : actin filament depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015659)
HIX0015659
HIT000617159_02 (
ENST00000517767
)
(Destrin; Actin-depolymerizing factor; ADF;)
genome : 17,581,382 - 17,585,277 (3,896)
query : 3 - 389 (387/391)
2 exons
identity = 0.964
5'(0.974;0.923)3'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 4.5, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015659)
HIX0226843
HIT000572997 (
ENST00000468428
)
(Conserved hypothetical protein.)
genome : 17,594,323 - 17,600,462 (6,140)
query : 1 - 2,200 (2,200/2,200)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 10, nucl 8, cyto 8, extr 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226843)
HIX0226843
HIT000023149
(
AK098319
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,594,325 - 17,600,462 (6,138)
query : 1 - 2,196 (2,196/2,196)
6 exons
identity = 0.997
3'(0.998;1.000;0.990;1.000;1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 6, nucl 5, cyto 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226843)
HIX0226880
HIT000428063
(
AK309197
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,600,883 - 17,617,275 (16,393)
query : 1 - 1,303 (1,303/1,303)
8 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226880)
HIX0226880
HIT000598862 (
ENST00000495501
)
(Conserved hypothetical protein.)
genome : 17,608,149 - 17,639,577 (31,429)
query : 1 - 809 (809/809)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13, extr 7, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226880)
HIX0226865
HIT000339145
(
BC108741
)
(Ribosome-binding protein 1.)
genome : 17,639,985 - 17,660,702 (20,718)
query : 1 - 1,248 (1,248/1,262)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR007794 : Ribosome receptor lysine/proline rich
GO :
0015031 : Biological Process : protein transport
0030176 : Cellular Component : integral component of endoplasmic reticulum membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 25, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226865)
HIX0226865
HIT000087361
(
BC009700
)
Representative transcript
(Ribosome-binding protein 1.)
genome : 17,640,255 - 17,662,850 (22,596)
query : 15 - 1,111 (1,097/1,125)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.987
InterPro :
IPR007794 : Ribosome receptor lysine/proline rich
GO :
0015031 : Biological Process : protein transport
0030176 : Cellular Component : integral component of endoplasmic reticulum membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 21, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226865)
HIX0226865
HIT000481927 (
ENST00000398782
)
(Ribosome receptor lysine/proline rich domain containing protein.)
genome : 17,640,251 - 17,662,940 (22,690)
query : 1 - 1,191 (1,191/1,191)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 21, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226865)
HIX0027767
HIT000561758 (
NM_001159495
)
(Barrier-to-autointegration factor-like protein; BAF-L; Barrier-to-autointegration factor 2;)
genome : 17,674,320 - 17,716,517 (42,198)
query : 1 - 369 (369/390)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4.5, cyto_nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027767)
HIX0027767
HIT000644463 (
ENST00000545418
)
(Barrier-to-autointegration factor-like protein; BAF-L; Barrier-to-autointegration factor 2;)
genome : 17,674,320 - 17,716,515 (42,196)
query : 1 - 367 (367/367)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027767)
HIX0040720
HIT000096946
(
BC041905
)
Representative transcript
(Conserved hypothetical protein.)
genome : 17,678,263 - 17,680,503 (2,241)
query : 2 - 2,241 (2,240/2,256)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 9, nucl 6, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040720)
HIX0027767
HIT000525188 (
ENST00000427254
)
(Barrier-to-autointegration factor-like protein isoform 1.)
genome : 17,680,587 - 17,705,796 (25,210)
query : 1 - 623 (623/623)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12, extr 5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027767)
HIX0027767
HIT000054095
(
BC054871
)
(Barrier-to-autointegration factor-like protein; BAF-L; Barrier-to-autointegration factor 2;)
genome : 17,680,593 - 17,716,513 (35,921)
query : 5 - 445 (441/470)
3 exons
identity = 0.995
5'(0.991;0.992;1.000)3'
coverage = 0.989
InterPro :
IPR004122 : Barrier- to-autointegration factor, BAF
GO :
0003677 : Molecular Function : DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3.5, cyto_nucl 3, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027767)
HIX0027767
HIT000318108 (
NM_178477
)
(Barrier-to-autointegration factor-like protein; BAF-L; Barrier-to-autointegration factor 2;)
genome : 17,680,593 - 17,716,517 (35,925)
query : 1 - 608 (608/629)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7.5, cyto 6, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027767)
HIX0027767
HIT000365417 (
NM_001014977
)
(Barrier-to-autointegration factor-like protein; BAF-L; Barrier-to-autointegration factor 2;)
genome : 17,680,593 - 17,716,517 (35,925)
query : 1 - 445 (445/466)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7.5, cyto 6, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027767)
HIX0027767
HIT000359085 (
ENST00000377805
)
(Barrier-to-autointegration factor-like protein; BAF-L; Barrier-to-autointegration factor 2;)
genome : 17,680,593 - 17,716,516 (35,924)
query : 1 - 444 (444/444)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7.5, cyto 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027767)
HIX0027767
HIT000260626
(
BC062735
)
Representative transcript
(Barrier-to-autointegration factor-like protein; BAF-L; Barrier-to-autointegration factor 2;)
genome : 17,680,605 - 17,716,515 (35,911)
query : 4 - 597 (594/629)
4 exons
identity = 0.997
5'(0.990;1.000;0.992;1.000)3'
coverage = 0.990
InterPro :
IPR004122 : Barrier- to-autointegration factor, BAF
GO :
0003677 : Molecular Function : DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3.5, cyto_nucl 3, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027767)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK076863
Bos
sp. (Cow) : BC108144
Tetraodon
sp. (Tetraodon) : CR649514
Equus
sp. (Horse) : ENSECAT00000015046
Pongo
sp. (Orangutan) : ENSPPYT00000012465
Rattus
sp. (Rat) : ENSRNOT00000007946
Pan
sp. (Chimpanzee) : XM_001139094
Monodelphis
sp. (Opossum) : XM_001382072
Canis
sp. (Dog) : XM_542878
HIX0027767
HIT000105634 (
ENST00000246090
)
(Barrier-to-autointegration factor-like protein; BAF-L; Barrier-to-autointegration factor 2;)
genome : 17,680,605 - 17,716,516 (35,912)
query : 1 - 595 (595/595)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7.5, cyto 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027767)
HIX0027767
HIT000571946 (
ENST00000467330
)
(Barrier-to-autointegration factor-like protein isoform 1.)
genome : 17,711,824 - 17,716,443 (4,620)
query : 1 - 464 (464/464)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027767)
HIX0040698
HIT000093389
(
BC034305
)
Representative transcript
(Leptin receptor isoform 2 precursor.)
genome : 17,758,971 - 17,760,740 (1,770)
query : 33 - 1,838 (1,806/1,838)
2 exons
identity = 0.951
3'(0.925;0.987)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040698)
HIX0226956
HIT000686955 (
ENST00000574649
)
(Hypothetical short protein.)
genome : 17,795,253 - 17,795,683 (431)
query : 1 - 431 (431/431)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226956)
HIX0226901
HIT000687231 (
ENST00000574969
)
(Hypothetical short protein.)
genome : 17,853,260 - 17,853,886 (627)
query : 1 - 536 (536/536)
2 exons
identity = 0.996
5'(1.000;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226901)
HIX0226901
HIT000684857 (
ENST00000572209
)
(Non-protein coding transcript.)
genome : 17,853,307 - 17,859,025 (5,719)
query : 1 - 226 (226/226)
2 exons
identity = 0.996
5'(1.000;0.992)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226901)
HIX0174853
HIT000523339 (
ENST00000425405
)
(Conserved hypothetical protein.)
genome : 17,868,007 - 17,868,804 (798)
query : 1 - 632 (632/632)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 10.5, cyto_nucl 10, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174853)
HIX0174853
HIT000686451 (
ENST00000574066
)
(Hypothetical protein.)
genome : 17,868,007 - 17,868,804 (798)
query : 1 - 632 (632/632)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 10.5, cyto_nucl 10, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174853)
HIX0015661
HIT000085789
(
BC000100
)
(Sorting nexin-5;)
genome : 17,922,245 - 17,949,472 (27,228)
query : 1 - 2,134 (2,134/2,185)
14 exons
identity = 0.998
3'(1.000;1.000;1.000;0.989;1.000;1.000;1.000;
0.990;0.992;1.000;1.000;1.000;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR015404 : Vps5 C-terminal
IPR028654 : Sorting nexin-5
GO :
0006886 : Biological Process : intracellular protein transport
0006907 : Biological Process : pinocytosis
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000260546
(
BC062638
)
(Sorting nexin-5;)
genome : 17,922,245 - 17,949,417 (27,173)
query : 3 - 1,997 (1,995/2,044)
13 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001683 : Phox homologous domain
IPR015404 : Vps5 C-terminal
IPR028654 : Sorting nexin-5
GO :
0006886 : Biological Process : intracellular protein transport
0006907 : Biological Process : pinocytosis
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, mito_nucl 12.8333, nucl 6, extr 5,
cyto_nucl 3.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000009501
(
AK026227
)
(Sorting nexin-5;)
genome : 17,922,244 - 17,930,847 (8,604)
query : 1 - 1,253 (1,253/1,274)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR015404 : Vps5 C-terminal
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028654 : Sorting nexin-5
GO :
0006886 : Biological Process : intracellular protein transport
0006907 : Biological Process : pinocytosis
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000027879
(
AL832967
)
(Conserved hypothetical protein.)
genome : 17,922,247 - 17,926,174 (3,928)
query : 1 - 3,926 (3,926/3,948)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 11, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000359048 (
ENST00000377768
)
(Sorting nexin-5;)
genome : 17,922,241 - 17,949,623 (27,383)
query : 1 - 2,288 (2,288/2,288)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000593744 (
ENST00000490175
)
(Sorting nexin-5;)
genome : 17,922,241 - 17,949,443 (27,203)
query : 1 - 2,025 (2,025/2,025)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 6.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000359039 (
ENST00000377759
)
(Sorting nexin-5;)
genome : 17,922,241 - 17,949,241 (27,001)
query : 1 - 2,148 (2,148/2,148)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000587374 (
ENST00000483485
)
(Sorting nexin-5;)
genome : 17,922,241 - 17,942,638 (20,398)
query : 1 - 3,087 (3,087/3,087)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito 3.5, E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000213518 (
NM_152227
)
(Sorting nexin-5;)
genome : 17,922,244 - 17,949,490 (27,247)
query : 1 - 2,152 (2,152/2,154)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000204801 (
NM_014426
)
(Sorting nexin-5;)
genome : 17,922,244 - 17,949,154 (26,911)
query : 1 - 2,058 (2,058/2,058)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000588639 (
ENST00000484809
)
(Sorting nexin-5;)
genome : 17,922,244 - 17,924,266 (2,023)
query : 1 - 1,321 (1,321/1,321)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, mito 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000004267
(
AK001793
)
(Sorting nexin-5;)
genome : 17,922,246 - 17,949,154 (26,909)
query : 1 - 2,056 (2,056/2,056)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000048776
(
AK129505
)
(Sorting nexin-5;)
genome : 17,922,246 - 17,949,154 (26,909)
query : 1 - 2,056 (2,056/2,056)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR015404 : Vps5 C-terminal
IPR028654 : Sorting nexin-5
GO :
0006886 : Biological Process : intracellular protein transport
0006907 : Biological Process : pinocytosis
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000331088
(
AK223308
)
(Sorting nexin-5;)
genome : 17,922,255 - 17,949,122 (26,868)
query : 1 - 2,015 (2,015/2,015)
13 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.990)5'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR015404 : Vps5 C-terminal
IPR028654 : Sorting nexin-5
GO :
0006886 : Biological Process : intracellular protein transport
0006907 : Biological Process : pinocytosis
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000594627 (
ENST00000491090
)
(Sorting nexin-5;)
genome : 17,922,478 - 17,928,265 (5,788)
query : 1 - 819 (819/819)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000580833_02 (
ENST00000476648
)
(Sorting nexin-5;)
genome : 17,922,782 - 17,934,668 (11,887)
query : 1 - 950 (950/950)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 9, nucl 5.5, cyto_nucl 5.5, cyto 4.5,
extr_plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000070332
(
AF121855
)
Representative transcript
(Sorting nexin-5;)
genome : 17,922,850 - 17,949,490 (26,641)
query : 1 - 1,546 (1,546/1,547)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001683 : Phox homologous domain
IPR015404 : Vps5 C-terminal
IPR028654 : Sorting nexin-5
GO :
0006886 : Biological Process : intracellular protein transport
0006907 : Biological Process : pinocytosis
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172268
Gallus
sp. (Chicken) : AJ721052
Mus
sp. (Mouse) : AK169786
Danio
sp. (Zebrafish) : BC075758
Bos
sp. (Cow) : BC103213
Pongo
sp. (Orangutan) : CR858639
Oryzias
sp. (Medaka) : ENSORLT00000014942
Tetraodon
sp. (Tetraodon) : GSTENT00030807001
Takifugu
sp. (Fugu) : SINFRUT00000148506
Rattus
sp. (Rat) : XM_001053951
Monodelphis
sp. (Opossum) : XM_001382071
Equus
sp. (Horse) : XM_001493978
Pan
sp. (Chimpanzee) : XM_514528
Canis
sp. (Dog) : XM_542877
HIX0015661
HIT000011248
(
AK054634
)
(Sorting nexin-5;)
genome : 17,922,866 - 17,942,638 (19,773)
query : 1 - 2,462 (2,462/2,462)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR015404 : Vps5 C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito 3.5, E.R._mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000426883
(
AK308017
)
(Sorting nexin-5;)
genome : 17,922,926 - 17,949,436 (26,511)
query : 3 - 1,615 (1,613/1,615)
14 exons
identity = 0.995
3'(1.000;1.000;1.000;0.989;1.000;1.000;1.000;
0.990;1.000;0.992;1.000;1.000;1.000;0.982)5'
coverage = 0.999
InterPro :
IPR001683 : Phox homologous domain
IPR028654 : Sorting nexin-5
GO :
0006886 : Biological Process : intracellular protein transport
0006907 : Biological Process : pinocytosis
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15.5, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000334598
(
BC093623
)
(Sorting nexin-5;)
genome : 17,922,946 - 17,949,363 (26,418)
query : 1 - 1,565 (1,565/1,565)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR015404 : Vps5 C-terminal
IPR028654 : Sorting nexin-5
GO :
0006886 : Biological Process : intracellular protein transport
0006907 : Biological Process : pinocytosis
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000334955
(
BC093980
)
(Sorting nexin-5;)
genome : 17,922,946 - 17,949,363 (26,418)
query : 1 - 1,565 (1,565/1,565)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR015404 : Vps5 C-terminal
IPR028654 : Sorting nexin-5
GO :
0006886 : Biological Process : intracellular protein transport
0006907 : Biological Process : pinocytosis
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000501734
(
BC143274
)
(Sorting nexin-5;)
genome : 17,922,946 - 17,949,363 (26,418)
query : 1 - 1,565 (1,565/1,565)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR015404 : Vps5 C-terminal
IPR028654 : Sorting nexin-5
GO :
0006886 : Biological Process : intracellular protein transport
0006907 : Biological Process : pinocytosis
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000605865_02 (
ENST00000505757
)
(Sorting nexin-5;)
genome : 17,923,001 - 17,937,681 (14,681)
query : 1 - 1,041 (1,041/1,041)
11 exons
identity = 0.961
3'(0.980;0.965;0.962;0.943;0.925;0.948;0.972;
0.958;0.951;0.991;0.952)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 9, cyto_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000622303_02 (
ENST00000523019
)
(Sorting nexin-5;)
genome : 17,923,001 - 17,928,268 (5,268)
query : 1 - 276 (276/276)
3 exons
identity = 0.975
3'(1.000;0.988;0.957)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000491571
(
AK296947
)
(Sorting nexin-5;)
genome : 17,927,812 - 17,949,437 (21,626)
query : 1 - 1,589 (1,589/1,589)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001683 : Phox homologous domain
IPR015404 : Vps5 C-terminal
IPR028654 : Sorting nexin-5
GO :
0006886 : Biological Process : intracellular protein transport
0006907 : Biological Process : pinocytosis
0035091 : Molecular Function : phosphatidylinositol binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, mito_nucl 12.5, mito 11.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000567860 (
ENST00000463050
)
(Sorting nexin-5;)
genome : 17,927,851 - 17,932,181 (4,331)
query : 1 - 786 (786/786)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000529211 (
ENST00000431277
)
(Sorting nexin-5;)
genome : 17,929,534 - 17,949,101 (19,568)
query : 1 - 840 (840/840)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000516938 (
ENST00000419004
)
(Sorting nexin-5;)
genome : 17,930,776 - 17,949,154 (18,379)
query : 1 - 772 (772/772)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000597800 (
ENST00000494401
)
(Sorting nexin-5;)
genome : 17,930,966 - 17,936,121 (5,156)
query : 13 - 656 (644/656)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 14.5, extr 5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000579157 (
ENST00000474883
)
(Sorting nexin-5;)
genome : 17,932,170 - 17,949,399 (17,230)
query : 1 - 695 (695/695)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13, extr 8, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000579946 (
ENST00000475716
)
(Sorting nexin-5;)
genome : 17,934,640 - 17,942,835 (8,196)
query : 1 - 715 (715/715)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, nucl 15, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000574214 (
ENST00000469704
)
(Sorting nexin-5;)
genome : 17,934,774 - 17,949,403 (14,630)
query : 1 - 696 (696/696)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 14.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0060034
HIT000367318 (
NR_003045
)
(Hypothetical short protein.)
genome : 17,943,353 - 17,943,589 (237)
query : 1 - 237 (237/237)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 4, nucl 2, cyto 2, cyto_nucl 2,
E.R._mito 2, mito_pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0060034)
HIX0060034
HIT000474457 (
ENST00000390930
)
(Hypothetical short protein.)
genome : 17,943,353 - 17,943,589 (237)
query : 1 - 237 (237/237)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 4, nucl 2, cyto 2, cyto_nucl 2,
E.R._mito 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0060034)
HIX0060034
HIT000460069
(
DQ593538
)
Representative transcript
(Non-protein coding transcript.)
genome : 17,943,355 - 17,943,384 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0060034)
HIX0015661
HIT000043776
(
AK123903
)
(Conserved hypothetical protein.)
genome : 17,947,570 - 17,949,436 (1,867)
query : 2 - 1,869 (1,868/1,869)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 10.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000031130
(
BC002724
)
(Conserved hypothetical protein.)
genome : 17,948,333 - 17,949,417 (1,085)
query : 1 - 1,085 (1,085/1,106)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 10.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000264966
(
BC073171
)
(Hypothetical short protein.)
genome : 17,948,333 - 17,949,428 (1,096)
query : 1 - 882 (882/896)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13.5, extr 8, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000261474
(
BC064555
)
(Conserved hypothetical protein.)
genome : 17,948,345 - 17,949,418 (1,074)
query : 1 - 1,074 (1,074/1,088)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 10.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000585299 (
ENST00000481323
)
(Conserved hypothetical protein.)
genome : 17,948,562 - 17,949,454 (893)
query : 1 - 562 (562/562)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000100111
(
BT007191
)
(Conserved hypothetical protein.)
genome : 17,948,690 - 17,949,068 (379)
query : 1 - 379 (379/381)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 10.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015661
HIT000589813 (
ENST00000486039
)
(Hypothetical short protein.)
genome : 17,948,751 - 17,949,437 (687)
query : 1 - 602 (602/602)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 13, extr 10, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015661)
HIX0015662
HIT000358990 (
ENST00000377710
)
(Mitochondrial genome maintenance exonuclease 1; EC=3.1.-.-; Precursor;)
genome : 17,949,556 - 17,971,765 (22,210)
query : 1 - 2,336 (2,336/2,336)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, mito_nucl 13, nucl 5.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015662)
HIX0015662
HIT000076874
(
AF306686
)
(Mitochondrial genome maintenance exonuclease 1; EC=3.1.-.-; Precursor;)
genome : 17,949,689 - 17,950,755 (1,067)
query : 2 - 409 (408/409)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.998
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 8.5, mito_nucl 5.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015662)
HIX0015662
HIT000434398
(
AK315532
)
(Mitochondrial genome maintenance exonuclease 1; EC=3.1.-.-; Precursor;)
genome : 17,949,698 - 17,970,752 (21,055)
query : 1 - 1,181 (1,181/1,181)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR011335 : Restriction endonuclease type II-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, mito_nucl 13, nucl 5.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015662)
HIX0015662
HIT000358989 (
ENST00000377709
)
(Mitochondrial genome maintenance exonuclease 1; EC=3.1.-.-; Precursor;)
genome : 17,949,716 - 17,971,765 (22,050)
query : 1 - 1,936 (1,936/1,936)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, mito_nucl 12, extr 6, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015662)
HIX0015662
HIT000076873
(
AF306685
)
(Mitochondrial genome maintenance exonuclease 1; EC=3.1.-.-; Precursor;)
genome : 17,949,726 - 17,971,760 (22,035)
query : 1 - 2,165 (2,165/2,186)
5 exons
identity = 0.998
5'(1.000;0.998;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR011335 : Restriction endonuclease type II-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, mito_nucl 13, nucl 5.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015662)
HIX0015662
HIT000076872
(
AF306684
)
(Mitochondrial genome maintenance exonuclease 1; EC=3.1.-.-; Precursor;)
genome : 17,949,726 - 17,970,666 (20,941)
query : 1 - 1,068 (1,068/1,068)
5 exons
identity = 0.997
5'(1.000;0.996;1.000;0.992;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015662)
HIX0015662
HIT000010775
(
AK027503
)
(Mitochondrial genome maintenance exonuclease 1; EC=3.1.-.-; Precursor;)
genome : 17,949,730 - 17,971,763 (22,034)
query : 1 - 2,160 (2,160/2,160)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR011335 : Restriction endonuclease type II-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, mito_nucl 13, nucl 5.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015662)
HIX0015662
HIT000358984 (
ENST00000377704
)
(Mitochondrial genome maintenance exonuclease 1; EC=3.1.-.-; Precursor;)
genome : 17,949,758 - 17,971,765 (22,008)
query : 1 - 1,781 (1,781/1,781)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, mito_pero 9.5, extr 9, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015662)
HIX0015662
HIT000037734
(
BC016869
)
Representative transcript
(Mitochondrial genome maintenance exonuclease 1; EC=3.1.-.-; Precursor;)
genome : 17,949,762 - 17,971,760 (21,999)
query : 1 - 2,125 (2,125/2,142)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR011335 : Restriction endonuclease type II-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, mito_nucl 13, nucl 5.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015662)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172714
Mus
sp. (Mouse) : AK031535
Danio
sp. (Zebrafish) : BC086716
Rattus
sp. (Rat) : BC087676
Bos
sp. (Cow) : BC116086
Gallus
sp. (Chicken) : BX929403
Canis
sp. (Dog) : ENSCAFT00000008775
Equus
sp. (Horse) : ENSECAT00000013178
Monodelphis
sp. (Opossum) : ENSMODT00000006933
Pongo
sp. (Orangutan) : ENSPPYT00000012468
Tetraodon
sp. (Tetraodon) : GSTENT00030808001
Takifugu
sp. (Fugu) : SINFRUT00000148503
Pan
sp. (Chimpanzee) : XM_001139748
HIX0015662
HIT000211491 (
NM_052865
)
(Mitochondrial genome maintenance exonuclease 1; EC=3.1.-.-; Precursor;)
genome : 17,949,762 - 17,971,760 (21,999)
query : 1 - 2,125 (2,125/2,142)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, mito_nucl 13, nucl 5.5, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015662)
HIX0015662
HIT000056051
(
BX647404
)
(Mitochondrial genome maintenance exonuclease 1; EC=3.1.-.-; Precursor;)
genome : 17,950,501 - 17,956,196 (5,696)
query : 1 - 4,740 (4,740/4,768)
2 exons
identity = 0.997
5'(0.997;0.996)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 12, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015662)
HIX0015662
HIT000428429
(
AK309563
)
(Mitochondrial genome maintenance exonuclease 1; EC=3.1.-.-; Precursor;)
genome : 17,950,632 - 17,971,457 (20,826)
query : 3 - 1,396 (1,394/1,396)
3 exons
identity = 0.996
5'(0.997;0.992;0.995)3'
coverage = 0.999
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015662)
HIX0015662
HIT000429148
(
AK310282
)
(Mitochondrial genome maintenance exonuclease 1; EC=3.1.-.-; Precursor;)
genome : 17,950,637 - 17,971,058 (20,422)
query : 1 - 967 (967/967)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR011335 : Restriction endonuclease type II-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 6.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015662)
HIX0015662
HIT000568023 (
ENST00000463219
)
(Mitochondrial genome maintenance exonuclease 1; EC=3.1.-.-; Precursor;)
genome : 17,950,674 - 17,971,052 (20,379)
query : 1 - 571 (571/571)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015662)
HIX0015662
HIT000572003 (
ENST00000467391
)
(Mitochondrial genome maintenance exonuclease 1; EC=3.1.-.-; Precursor;)
genome : 17,950,700 - 17,970,874 (20,175)
query : 1 - 740 (740/740)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13.5, nucl 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015662)
HIX0015662
HIT000428861
(
AK309995
)
(Mitochondrial genome maintenance exonuclease 1; EC=3.1.-.-; Precursor;)
genome : 17,950,702 - 17,971,094 (20,393)
query : 1 - 958 (958/958)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.5, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015662)
HIX0037225
HIT000545408 (
ENST00000447474
)
(Prothymosin/parathymosin family protein.)
genome : 17,992,599 - 17,992,928 (330)
query : 1 - 330 (330/330)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037225)
HIX0019117
HIT000005558
(
AK022284
)
Representative transcript
(Transcription factor Ovo-like 2 family protein.)
genome : 17,998,078 - 18,038,521 (40,444)
query : 1 - 2,273 (2,273/2,273)
5 exons
identity = 0.994
3'(0.978;0.996;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR027755 : Transcription factor Ovo-like 2
IPR027775 : C2H2- zinc finger protein family
GO :
0000981 : Molecular Function : sequence-specific DNA binding RNA polymerase II transcription factor activity
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006351 : Biological Process : transcription, DNA-templated
0006366 : Biological Process : transcription from RNA polymerase II promoter
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019117)
HIX0019117
HIT000111754 (
ENST00000278780
)
(Transcription factor Ovo-like 2 family protein.)
genome : 18,004,796 - 18,038,521 (33,726)
query : 1 - 1,555 (1,555/1,555)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019117)
HIX0019117
HIT000208322 (
NM_021220
)
(Transcription factor Ovo-like 2 family protein.)
genome : 18,004,796 - 18,038,521 (33,726)
query : 1 - 1,555 (1,555/1,555)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019117)
HIX0019117
HIT000032636
(
BC006148
)
(Transcription factor Ovo-like 2 family protein.)
genome : 18,004,902 - 18,038,526 (33,625)
query : 1 - 1,453 (1,453/1,471)
4 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR027755 : Transcription factor Ovo-like 2
IPR027775 : C2H2- zinc finger protein family
GO :
0000981 : Molecular Function : sequence-specific DNA binding RNA polymerase II transcription factor activity
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006351 : Biological Process : transcription, DNA-templated
0006366 : Biological Process : transcription from RNA polymerase II promoter
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019117)
HIX0019117
HIT000250115
(
AL079276
)
(Transcription factor Ovo-like 2 family protein.)
genome : 18,004,908 - 18,037,449 (32,542)
query : 1 - 1,027 (1,027/1,047)
3 exons
identity = 0.998
3'(0.997;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR027755 : Transcription factor Ovo-like 2
IPR027775 : C2H2- zinc finger protein family
GO :
0000981 : Molecular Function : sequence-specific DNA binding RNA polymerase II transcription factor activity
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006351 : Biological Process : transcription, DNA-templated
0006366 : Biological Process : transcription from RNA polymerase II promoter
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019117)
HIX0019117
HIT000597440 (
ENST00000494030
)
(Conserved hypothetical protein.)
genome : 18,004,906 - 18,039,832 (34,927)
query : 1 - 990 (990/990)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019117)
HIX0019117
HIT000587540 (
ENST00000483661
)
(Conserved hypothetical protein.)
genome : 18,004,906 - 18,039,694 (34,789)
query : 1 - 1,263 (1,263/1,263)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019117)
HIX0019117
HIT000100215
(
BT007295
)
(Transcription factor Ovo-like 2 family protein.)
genome : 18,005,282 - 18,038,278 (32,997)
query : 1 - 826 (826/828)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR027755 : Transcription factor Ovo-like 2
IPR027775 : C2H2- zinc finger protein family
GO :
0000981 : Molecular Function : sequence-specific DNA binding RNA polymerase II transcription factor activity
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006351 : Biological Process : transcription, DNA-templated
0006366 : Biological Process : transcription from RNA polymerase II promoter
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019117)
HIX0019117
HIT000567054 (
ENST00000462208
)
(Conserved hypothetical protein.)
genome : 18,022,249 - 18,031,383 (9,135)
query : 1 - 218 (218/218)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019117)
HIX0174876
HIT000527787 (
ENST00000429853
)
(Conserved hypothetical protein.)
genome : 18,040,137 - 18,051,652 (11,516)
query : 1 - 400 (400/400)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto_nucl 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174876)
HIX0015664
HIT000217903
(
U09366
)
(Zinc finger protein 133; Zinc finger protein 150;)
genome : 18,050,655 - 18,297,631 (246,977)
query : 1 - 2,580 (2,580/2,643)
5 exons
identity = 0.966
5'(0.832)3'
coverage = 0.976
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015664)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF332089
Rattus
sp. (Rat) : BC079070
Bos
sp. (Cow) : BC148931
Pongo
sp. (Orangutan) : CR858677
Equus
sp. (Horse) : ENSECAT00000015981
Pan
sp. (Chimpanzee) : ENSPTRT00000024688
Tetraodon
sp. (Tetraodon) : GSTENT00020605001
Macaca
sp. (Macaque) : XM_001088431
Monodelphis
sp. (Opossum) : XM_001368823
Canis
sp. (Dog) : XM_534335
HIX0174945
HIT000537915 (
ENST00000439981
)
(Ribosomal protein L15e family protein.)
genome : 18,070,760 - 18,071,359 (600)
query : 1 - 600 (600/600)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174945)
HIX0015660
HIT000314127 (
ENST00000360807
)
(Ribosome-binding protein 1.)
genome : 17,594,323 - 17,662,940 (68,618)
query : 1 - 3,727 (3,727/3,727)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 24, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015660)
HIX0015660
HIT000201331 (
NM_004587
)
(Ribosome-binding protein 1.)
genome : 17,594,323 - 17,662,928 (68,606)
query : 1 - 3,715 (3,715/3,715)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.989;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 24, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015660)
HIX0015660
HIT000359087 (
ENST00000377807
)
(Ribosome-binding protein 1.)
genome : 17,594,323 - 17,662,928 (68,606)
query : 1 - 3,792 (3,792/3,792)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 24, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015660)
HIX0015660
HIT000397598 (
NM_001042576
)
(Ribosome-binding protein 1.)
genome : 17,594,323 - 17,662,928 (68,606)
query : 1 - 3,792 (3,792/3,792)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.989;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 24, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015660)
HIX0015660
HIT000359093 (
ENST00000377813
)
(Ribosome-binding protein 1; 180 kDa ribosome receptor homolog; RRp; ES/130-related protein; Ribosome receptor protein;)
genome : 17,594,323 - 17,662,878 (68,556)
query : 1 - 5,041 (5,041/5,041)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 26, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015660)
HIX0015660
HIT000105619 (
ENST00000246043
)
(Ribosome-binding protein 1; 180 kDa ribosome receptor homolog; RRp; ES/130-related protein; Ribosome receptor protein;)
genome : 17,594,323 - 17,641,152 (46,830)
query : 1 - 4,737 (4,737/4,737)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 26, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015660)
HIX0015660
HIT000574895 (
ENST00000470422
)
(Ribosome-binding protein 1; 180 kDa ribosome receptor homolog; RRp; ES/130-related protein; Ribosome receptor protein;)
genome : 17,594,323 - 17,603,975 (9,653)
query : 1 - 2,070 (2,070/2,070)
13 exons
identity = 0.999
3'(1.000;0.986;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015660)
HIX0015660
HIT000061856
(
AF006751
)
Representative transcript
(Ribosome-binding protein 1.)
genome : 17,594,744 - 17,662,721 (67,978)
query : 1 - 3,087 (3,087/3,106)
25 exons
identity = 0.999
3'(1.000;1.000;1.000;0.988;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.989;1.000;
1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007794 : Ribosome receptor lysine/proline rich
GO :
0015031 : Biological Process : protein transport
0030176 : Cellular Component : integral component of endoplasmic reticulum membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 24, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015660)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK019964
Danio
sp. (Zebrafish) : BC054580
Canis
sp. (Dog) : ENSCAFT00000038540
Macaca
sp. (Macaque) : ENSMMUT00000019363
Oryzias
sp. (Medaka) : ENSORLT00000014883
Pongo
sp. (Orangutan) : ENSPPYT00000012464
Pan
sp. (Chimpanzee) : ENSPTRT00000050451
Rattus
sp. (Rat) : ENSRNOT00000007888
Tetraodon
sp. (Tetraodon) : GSTENT00030806001
Gallus
sp. (Chicken) : L13973
Monodelphis
sp. (Opossum) : XM_001382073
Equus
sp. (Horse) : XM_001914992
Bos
sp. (Cow) : XR_028249
HIX0015660
HIT000085788
(
BC000099
)
(Ribosome-binding protein 1; 180 kDa ribosome receptor homolog; RRp; ES/130-related protein; Ribosome receptor protein;)
genome : 17,594,744 - 17,617,294 (22,551)
query : 1 - 2,052 (2,052/2,069)
20 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.990;
1.000;1.000;1.000;1.000;1.000;0.989;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 14.6667, cyto 12,
cyto_golg 8.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015660)
HIX0015660
HIT000018332
(
AK093465
)
(Ribosome-binding protein 1; 180 kDa ribosome receptor homolog; RRp; ES/130-related protein; Ribosome receptor protein;)
genome : 17,594,745 - 17,603,975 (9,231)
query : 1 - 1,648 (1,648/1,648)
13 exons
identity = 0.997
3'(1.000;0.986;1.000;1.000;1.000;1.000;0.979;
1.000;1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015660)
HIX0015660
HIT000389931
(
BC128577
)
(Ribosome-binding protein 1.)
genome : 17,594,773 - 17,662,708 (67,936)
query : 1 - 3,451 (3,451/3,452)
25 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.990;
1.000;1.000;1.000;1.000;1.000;0.989;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999;1.000)5'
coverage = 1.000
InterPro :
IPR007794 : Ribosome receptor lysine/proline rich
GO :
0015031 : Biological Process : protein transport
0030176 : Cellular Component : integral component of endoplasmic reticulum membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 25, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015660)
HIX0015660
HIT000389932
(
BC128578
)
(Ribosome-binding protein 1; 180 kDa ribosome receptor homolog; RRp; ES/130-related protein; Ribosome receptor protein;)
genome : 17,594,773 - 17,662,705 (67,933)
query : 1 - 2,485 (2,485/2,486)
24 exons
identity = 0.999
3'(1.000;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.989;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15, nucl 7.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015660)
HIX0015660
HIT000552963 (
ENST00000455029
)
(Ribosome-binding protein 1; 180 kDa ribosome receptor homolog; RRp; ES/130-related protein; Ribosome receptor protein;)
genome : 17,594,773 - 17,662,705 (67,933)
query : 1 - 2,485 (2,485/2,485)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15, nucl 7.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015660)
HIX0015660
HIT000265797
(
BC080526
)
(Ribosome-binding protein 1; 180 kDa ribosome receptor homolog; RRp; ES/130-related protein; Ribosome receptor protein;)
genome : 17,596,075 - 17,622,487 (26,413)
query : 1 - 1,913 (1,913/1,951)
19 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.990;1.000;1.000;
1.000;1.000;0.989;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 18.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015660)
HIX0015660
HIT000050742
(
BC020482
)
(Ribosome-binding protein 1.)
genome : 17,600,318 - 17,623,687 (23,370)
query : 1 - 1,638 (1,638/1,638)
16 exons
identity = 0.999
3'(0.982;1.000;1.000;1.000;1.000;1.000;0.989;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 15, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015660)
HIX0015660
HIT000028696
(
AL833822
)
(Ribosome-binding protein 1.)
genome : 17,600,319 - 17,639,918 (39,600)
query : 1 - 2,400 (2,400/2,400)
17 exons
identity = 0.998
3'(0.982;1.000;1.000;1.000;1.000;0.978;0.989;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15, nucl 6.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015660)
HIX0213167
HIT000590513 (
ENST00000486776
)
(Conserved hypothetical protein.)
genome : 17,937,623 - 18,039,832 (102,210)
query : 1 - 550 (550/550)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213167)
AL049794.16
16500001-16585454 F +
NCBI
AL355579.12
16585455-16640789 F +
NCBI
AL135938.9
16640790-16687277 F +
NCBI
AL034428.4
16687278-16808320 F +
NCBI
AL121892.9
16808321-16885958 F +
NCBI
AL121592.14
16885959-16916854 F +
NCBI
AL031684.14
16916855-17060466 F +
NCBI
AL135940.11
17060467-17166330 F +
NCBI
AL359511.16
17166331-17229494 F +
NCBI
AL031675.4
17229495-17318915 F +
NCBI
AL121779.11
17318916-17379358 F +
NCBI
AL031664.1
17379359-17534391 F +
NCBI
AL132765.38
17534392-17700290 F +
NCBI
AL160071.16
17700291-17751746 F +
NCBI
AL035045.5
17751747-17874115 F +
NCBI
AL121585.22
17874116-18013860 F +
NCBI
AL160411.25
18013861-18100000 F +
NCBI