bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0015925
HIT000306644
(
CR749643
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,553,316 - 52,612,492 (59,177)
query : 1 - 5,718 (5,718/5,738)
8 exons
identity = 0.995
3'(0.995;0.986;1.000;1.000;0.995;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR026115 : Novel Amplified in Breast Cancer-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000546418 (
ENST00000448484
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,553,316 - 52,645,239 (91,924)
query : 1 - 6,112 (6,112/6,112)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 16.8333, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0175001
HIT000548407 (
ENST00000450473
)
(Hypothetical short protein.)
genome : 52,556,699 - 52,559,047 (2,349)
query : 1 - 884 (884/884)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15, nucl 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175001)
HIX0015925
HIT000352720 (
ENST00000371440
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,557,997 - 52,687,304 (129,308)
query : 1 - 2,183 (2,183/2,183)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000200467 (
NM_003657
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,560,079 - 52,687,304 (127,226)
query : 1 - 3,475 (3,475/3,475)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.6667, cyto_golg 11.1667,
nucl 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000479321 (
ENST00000395961
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,560,080 - 52,687,133 (127,054)
query : 1 - 3,303 (3,303/3,303)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.6667, cyto_golg 11.1667,
nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000352715 (
ENST00000371435
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,560,080 - 52,687,084 (127,005)
query : 1 - 3,020 (3,020/3,020)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.1667, nucl 11,
cyto_golg 10.6667, golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000384786
(
AK225656
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,560,232 - 52,687,073 (126,842)
query : 1 - 2,708 (2,708/2,736)
12 exons
identity = 0.994
3'(0.991;0.955;1.000;1.000;1.000;1.000;1.000;
1.000;0.997;1.000;0.987;1.000)5'
coverage = 1.000
InterPro :
IPR026115 : Novel Amplified in Breast Cancer-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 12, cyto_golg 9.5, golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000090872
(
BC024044
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,560,516 - 52,687,084 (126,569)
query : 1 - 2,582 (2,582/2,610)
10 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000;0.998;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026115 : Novel Amplified in Breast Cancer-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.1667, nucl 11,
cyto_golg 10.6667, golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000063652
(
AF041260
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,560,517 - 52,687,083 (126,567)
query : 1 - 2,813 (2,813/2,813)
12 exons
identity = 0.998
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026115 : Novel Amplified in Breast Cancer-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.6667, cyto_golg 11.1667,
nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000388938
(
BC126346
)
Representative transcript
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,560,902 - 52,687,015 (126,114)
query : 1 - 2,363 (2,363/2,363)
12 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026115 : Novel Amplified in Breast Cancer-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.6667, cyto_golg 11.1667,
nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY219233
Rattus
sp. (Rat) : BC103480
Bos
sp. (Cow) : BC151271
Gallus
sp. (Chicken) : CR522908
Monodelphis
sp. (Opossum) : ENSMODT00000040247
Pongo
sp. (Orangutan) : ENSPPYT00000012938
Macaca
sp. (Macaque) : XM_001092179
Equus
sp. (Horse) : XM_001488644
Pan
sp. (Chimpanzee) : XM_514731
Canis
sp. (Dog) : XM_849357
HIX0015925
HIT000388940
(
BC126348
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,560,910 - 52,687,015 (126,106)
query : 1 - 2,355 (2,355/2,355)
12 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;0.998;1.000;0.974;1.000)5'
coverage = 1.000
InterPro :
IPR026115 : Novel Amplified in Breast Cancer-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.6667, cyto_golg 11.1667,
nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000488759
(
AK294135
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,561,060 - 52,611,579 (50,520)
query : 1 - 1,327 (1,327/1,327)
7 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026115 : Novel Amplified in Breast Cancer-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000499651
(
AK316038
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,561,103 - 52,645,063 (83,961)
query : 1 - 1,382 (1,382/1,382)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.978;0.994;1.000)5'
coverage = 1.000
InterPro :
IPR026115 : Novel Amplified in Breast Cancer-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, nucl 14, cyto_golg 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000488774
(
AK294150
)
(Breast carcinoma-amplified sequence 1 homolog; Novel amplified in breast cancer 1 homolog;)
genome : 52,561,162 - 52,612,736 (51,575)
query : 1 - 1,337 (1,337/1,337)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026115 : Novel Amplified in Breast Cancer-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 6, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000532920 (
ENST00000434986
)
(Breast carcinoma-amplified sequence 1 homolog; Novel amplified in breast cancer 1 homolog;)
genome : 52,561,162 - 52,612,736 (51,575)
query : 1 - 1,337 (1,337/1,337)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 6, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000520739 (
ENST00000422805
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,561,322 - 52,612,468 (51,147)
query : 1 - 882 (882/882)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11, cyto 6.5, extr 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000489942
(
AK295318
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,561,374 - 52,645,170 (83,797)
query : 1 - 1,428 (1,428/1,428)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026115 : Novel Amplified in Breast Cancer-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.3333, cyto 8.5,
cyto_golg 5.66667, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000434086
(
AK315220
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,561,461 - 52,687,304 (125,844)
query : 1 - 2,093 (2,093/2,093)
12 exons
identity = 0.998
3'(0.987;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;0.998;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR026115 : Novel Amplified in Breast Cancer-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.6667, cyto_golg 11.1667,
nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000430081
(
AK311215
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,570,181 - 52,645,173 (74,993)
query : 1 - 848 (848/848)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;0.978;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026115 : Novel Amplified in Breast Cancer-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14, cyto 10, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0059983
HIT000008242
(
AK024968
)
Representative transcript
(Conserved hypothetical protein.)
genome : 52,598,095 - 52,600,084 (1,990)
query : 1 - 1,990 (1,990/2,010)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059983)
HIX0015925
HIT000427250
(
AK308384
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,601,964 - 52,687,073 (85,110)
query : 1 - 1,108 (1,108/1,108)
7 exons
identity = 0.997
3'(1.000;1.000;1.000;0.998;1.000;0.974;1.000)5'
coverage = 1.000
InterPro :
IPR026115 : Novel Amplified in Breast Cancer-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 6, extr 2, plas 1, mito 1, cysk 1,
golg 1, cysk_plas 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000498837
(
AK304213
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,644,411 - 52,687,030 (42,620)
query : 1 - 1,160 (1,160/1,160)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR026115 : Novel Amplified in Breast Cancer-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 6.5, cyto_nucl 5.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0015925
HIT000509497 (
ENST00000411563
)
(Breast carcinoma-amplified sequence 1; Amplified and overexpressed in breast cancer; Novel amplified in breast cancer 1;)
genome : 52,644,411 - 52,687,030 (42,620)
query : 1 - 1,160 (1,160/1,160)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 6.5, cyto_nucl 5.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015925)
HIX0226902
HIT000689824 (
ENST00000577874
)
(Non-protein coding transcript.)
genome : 52,684,947 - 52,685,024 (78)
query : 1 - 78 (78/78)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226902)
HIX0226902
HIT000725976 (
NR_039913
)
(Non-protein coding transcript.)
genome : 52,684,947 - 52,685,024 (78)
query : 1 - 78 (78/78)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226902)
HIX0040564
HIT000197794 (
NM_000782
)
(1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; 24-OHase; Vitamin D(3) 24-hydroxylase; EC=1.14.13.126; Cytochrome P450 24A1; Cytochrome P450-CC24; Precursor;)
genome : 52,769,988 - 52,790,516 (20,529)
query : 1 - 3,266 (3,266/3,287)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.13.126
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29, cyto_mito 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040564)
HIX0040564
HIT000559516 (
NM_001128915
)
(1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; 24-OHase; Vitamin D(3) 24-hydroxylase; EC=1.14.13.126; Cytochrome P450 24A1; Cytochrome P450-CC24; Precursor;)
genome : 52,769,988 - 52,790,516 (20,529)
query : 1 - 3,068 (3,068/3,089)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.13.126
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29.5, cyto_mito 16
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040564)
HIX0040564
HIT000192192
(
L13286
)
(1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; 24-OHase; Vitamin D(3) 24-hydroxylase; EC=1.14.13.126; Cytochrome P450 24A1; Cytochrome P450-CC24; Precursor;)
genome : 52,769,988 - 52,790,512 (20,525)
query : 3 - 3,254 (3,252/3,254)
12 exons
identity = 0.991
3'(0.995;1.000;1.000;0.975;0.976;1.000;0.982;
1.000;0.990;1.000;0.984;0.983)5'
coverage = 0.999
EC number :
EC 1.14.13.126
InterPro :
IPR001128 : Cytochrome P450
IPR002401 : Cytochrome P450, E-class, group I
IPR017972 : Cytochrome P450, conserved site
GO :
0005506 : Molecular Function : iron ion binding
0016705 : Molecular Function : oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30, cyto_mito 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040564)
HIX0040564
HIT000103125 (
ENST00000216862
)
(1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; 24-OHase; Vitamin D(3) 24-hydroxylase; EC=1.14.13.126; Cytochrome P450 24A1; Cytochrome P450-CC24; Precursor;)
genome : 52,769,988 - 52,790,512 (20,525)
query : 1 - 3,262 (3,262/3,262)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.13.126
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29, cyto_mito 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040564)
HIX0040564
HIT000339252
(
BC109083
)
Representative transcript
(1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; 24-OHase; Vitamin D(3) 24-hydroxylase; EC=1.14.13.126; Cytochrome P450 24A1; Cytochrome P450-CC24; Precursor;)
genome : 52,770,501 - 52,790,203 (19,703)
query : 1 - 2,242 (2,242/2,242)
11 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.13.126
InterPro :
IPR001128 : Cytochrome P450
IPR002949 : Cytochrome P450, E-class, CYP24A, mitochondrial
GO :
0005506 : Molecular Function : iron ion binding
0016705 : Molecular Function : oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29.5, cyto_mito 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040564)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AF019142
Mus
sp. (Mouse) : AK143984
Rattus
sp. (Rat) : BC100059
Danio
sp. (Zebrafish) : BC133740
Tetraodon
sp. (Tetraodon) : CR649718
Equus
sp. (Horse) : ENSECAT00000017433
Macaca
sp. (Macaque) : ENSMMUT00000020850
Oryzias
sp. (Medaka) : ENSORLT00000008395
Pongo
sp. (Orangutan) : ENSPPYT00000012939
Takifugu
sp. (Fugu) : SINFRUT00000134969
Monodelphis
sp. (Opossum) : XM_001378239
Canis
sp. (Dog) : XM_543059
Bos
sp. (Cow) : XM_591370
HIX0040564
HIT000339253
(
BC109084
)
(1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; 24-OHase; Vitamin D(3) 24-hydroxylase; EC=1.14.13.126; Cytochrome P450 24A1; Cytochrome P450-CC24; Precursor;)
genome : 52,770,501 - 52,790,203 (19,703)
query : 1 - 2,242 (2,242/2,242)
11 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.13.126
InterPro :
IPR001128 : Cytochrome P450
IPR002949 : Cytochrome P450, E-class, CYP24A, mitochondrial
GO :
0005506 : Molecular Function : iron ion binding
0016705 : Molecular Function : oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29.5, cyto_mito 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040564)
HIX0040564
HIT000479315 (
ENST00000395955
)
(1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; 24-OHase; Vitamin D(3) 24-hydroxylase; EC=1.14.13.126; Cytochrome P450 24A1; Cytochrome P450-CC24; Precursor;)
genome : 52,770,501 - 52,790,188 (19,688)
query : 1 - 2,227 (2,227/2,227)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.13.126
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29.5, cyto_mito 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040564)
HIX0040564
HIT000565563 (
ENST00000460643
)
(1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; 24-OHase; Vitamin D(3) 24-hydroxylase; EC=1.14.13.126; Cytochrome P450 24A1; Cytochrome P450-CC24; Precursor;)
genome : 52,770,909 - 52,773,837 (2,929)
query : 1 - 694 (694/694)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.13.126
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 8.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040564)
HIX0040564
HIT000257908
(
AY858838
)
(1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; 24-OHase; Vitamin D(3) 24-hydroxylase; EC=1.14.13.126; Cytochrome P450 24A1; Cytochrome P450-CC24; Precursor;)
genome : 52,771,252 - 52,788,492 (17,241)
query : 1 - 1,438 (1,438/1,438)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.13.126
InterPro :
IPR001128 : Cytochrome P450
IPR002401 : Cytochrome P450, E-class, group I
IPR017972 : Cytochrome P450, conserved site
GO :
0005506 : Molecular Function : iron ion binding
0016705 : Molecular Function : oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, nucl 6, extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040564)
HIX0040564
HIT000479314 (
ENST00000395954
)
(1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; 24-OHase; Vitamin D(3) 24-hydroxylase; EC=1.14.13.126; Cytochrome P450 24A1; Cytochrome P450-CC24; Precursor;)
genome : 52,771,252 - 52,788,492 (17,241)
query : 1 - 1,438 (1,438/1,438)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.13.126
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, nucl 6, extr 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040564)
HIX0040564
HIT000216206
(
S67623
)
(1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; 24-OHase; Vitamin D(3) 24-hydroxylase; EC=1.14.13.126; Cytochrome P450 24A1; Cytochrome P450-CC24; Precursor;)
genome : 52,773,718 - 52,781,065 (7,348)
query : 1 - 776 (776/776)
6 exons
identity = 0.996
3'(0.991;0.995;1.000;0.994;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.13.126
InterPro :
IPR001128 : Cytochrome P450
IPR002401 : Cytochrome P450, E-class, group I
IPR017972 : Cytochrome P450, conserved site
GO :
0005506 : Molecular Function : iron ion binding
0016705 : Molecular Function : oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 7, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040564)
HIX0040564
HIT000591290 (
ENST00000487593
)
(1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; 24-OHase; Vitamin D(3) 24-hydroxylase; EC=1.14.13.126; Cytochrome P450 24A1; Cytochrome P450-CC24; Precursor;)
genome : 52,779,119 - 52,781,087 (1,969)
query : 1 - 380 (380/380)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.13.126
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13.6667, cyto_plas 12.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040564)
HIX0040564
HIT000577319 (
ENST00000472970
)
(1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; 24-OHase; Vitamin D(3) 24-hydroxylase; EC=1.14.13.126; Cytochrome P450 24A1; Cytochrome P450-CC24; Precursor;)
genome : 52,789,339 - 52,789,955 (617)
query : 1 - 395 (395/395)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.13.126
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040564)
HIX0015927
HIT000352699 (
ENST00000371419
)
(Prefoldin subunit 4; Protein C-1;)
genome : 52,824,386 - 52,836,492 (12,107)
query : 1 - 1,462 (1,462/1,462)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14.6667, cyto_plas 11.6667,
nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015927)
HIX0015927
HIT000199510 (
NM_002623
)
(Prefoldin subunit 4; Protein C-1;)
genome : 52,824,502 - 52,836,492 (11,991)
query : 1 - 1,346 (1,346/1,383)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14.6667, cyto_plas 11.6667,
nucl 4.5, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015927)
HIX0015927
HIT000035142
(
BC010953
)
Representative transcript
(Prefoldin subunit 4; Protein C-1;)
genome : 52,824,623 - 52,835,736 (11,114)
query : 2 - 470 (469/500)
4 exons
identity = 0.998
5'(0.976;1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR002777 : Prefoldin beta-like
IPR009053 : Prefoldin
IPR016661 : Prefoldin, subunit 4
GO :
0006457 : Biological Process : protein folding
0016272 : Cellular Component : prefoldin complex
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14.6667, cyto_plas 11.6667,
nucl 4.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015927)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC065407
Gallus
sp. (Chicken) : BX950659
Tetraodon
sp. (Tetraodon) : CR718661
Bos
sp. (Cow) : ENSBTAT00000011605
Equus
sp. (Horse) : ENSECAT00000023664
Monodelphis
sp. (Opossum) : ENSMODT00000020852
Pongo
sp. (Orangutan) : ENSPPYT00000029319
Takifugu
sp. (Fugu) : SINFRUT00000134263
Macaca
sp. (Macaque) : XM_001091947
Pan
sp. (Chimpanzee) : XM_514732
Canis
sp. (Dog) : XM_534459
HIX0015927
HIT000430925
(
AK312059
)
(Prefoldin subunit 4; Protein C-1;)
genome : 52,824,626 - 52,835,689 (11,064)
query : 1 - 419 (419/419)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.992)3'
coverage = 1.000
InterPro :
IPR002777 : Prefoldin beta-like
IPR009053 : Prefoldin
IPR016661 : Prefoldin, subunit 4
GO :
0006457 : Biological Process : protein folding
0016272 : Cellular Component : prefoldin complex
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.1667, cyto_plas 11.5, extr 5,
nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015927)
HIX0015927
HIT000539014 (
ENST00000441080
)
(Prefoldin subunit 4; Protein C-1;)
genome : 52,824,634 - 52,844,591 (19,958)
query : 1 - 579 (579/579)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.1667, cyto_plas 11.1667,
nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015927)
HIX0015927
HIT000219791
(
U41816
)
(Prefoldin subunit 4; Protein C-1;)
genome : 52,824,641 - 52,836,492 (11,852)
query : 1 - 1,204 (1,204/1,241)
4 exons
identity = 0.997
5'(1.000;1.000;1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 8, extr 6, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015927)
HIX0015927
HIT000596795 (
ENST00000493356
)
(Prefoldin subunit 4; Protein C-1;)
genome : 52,824,839 - 52,835,824 (10,986)
query : 1 - 659 (659/659)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015927)
HIX0015927
HIT000590846 (
ENST00000487129
)
(Prefoldin subunit 4; Protein C-1;)
genome : 52,824,851 - 52,835,742 (10,892)
query : 1 - 762 (762/762)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015927)
HIX0015927
HIT000578620 (
ENST00000474326
)
(Hypothetical short protein.)
genome : 52,824,967 - 52,830,949 (5,983)
query : 1 - 191 (191/191)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015927)
HIX0015928
HIT000108476 (
ENST00000262593
)
(Insulin receptor substrate-1, PTB domain containing protein.)
genome : 53,092,136 - 53,267,710 (175,575)
query : 1 - 1,963 (1,963/1,963)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, nucl 9, mito 9, cyto 8, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015928)
HIX0015928
HIT000594993 (
ENST00000491469
)
(Hypothetical short protein.)
genome : 53,092,165 - 53,111,693 (19,529)
query : 1 - 742 (742/742)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 4, extr 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015928)
HIX0015928
HIT000034131
(
BC008992
)
(Docking protein 5; Downstream of tyrosine kinase 5; Insulin receptor substrate 6; IRS-6; IRS6;)
genome : 53,092,257 - 53,267,429 (175,173)
query : 1 - 1,453 (1,453/1,489)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR002404 : Insulin receptor substrate-1, PTB
GO :
0005158 : Molecular Function : insulin receptor binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 10, cyto_nucl 9, nucl 3, mito 2, pero 2,
golg 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015928)
HIX0015928
HIT000479299 (
ENST00000395939
)
(Insulin receptor substrate-1, PTB domain containing protein.)
genome : 53,092,257 - 53,267,429 (175,173)
query : 1 - 1,453 (1,453/1,453)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 10, cyto_nucl 9, nucl 3, mito 2, pero 2,
golg 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015928)
HIX0015928
HIT000207235 (
NM_018431
)
(Insulin receptor substrate-1, PTB domain containing protein.)
genome : 53,092,266 - 53,267,710 (175,445)
query : 1 - 1,833 (1,833/1,833)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, nucl 9, mito 9, cyto 8, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015928)
HIX0015928
HIT000070909
(
AF132732
)
(Docking protein 5; Downstream of tyrosine kinase 5; Insulin receptor substrate 6; IRS-6; IRS6;)
genome : 53,092,289 - 53,267,710 (175,422)
query : 1 - 1,810 (1,810/1,840)
8 exons
identity = 0.991
5'(0.996;1.000;1.000;1.000;1.000;0.899;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
IPR002404 : Insulin receptor substrate-1, PTB
GO :
0005158 : Molecular Function : insulin receptor binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito_nucl 11.1667, nucl 11, mito 11, cyto_nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015928)
HIX0015928
HIT000432088
(
AK313222
)
Representative transcript
(Docking protein 5; Downstream of tyrosine kinase 5; Insulin receptor substrate 6; IRS-6; IRS6;)
genome : 53,092,299 - 53,267,018 (174,720)
query : 1 - 1,108 (1,108/1,108)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
IPR002404 : Insulin receptor substrate-1, PTB
GO :
0005158 : Molecular Function : insulin receptor binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, nucl 9, mito 9, cyto 8, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015928)
HIX0015928
HIT000080333
(
AF466368
)
(Docking protein 5; Downstream of tyrosine kinase 5; Insulin receptor substrate 6; IRS-6; IRS6;)
genome : 53,092,486 - 53,267,018 (174,533)
query : 1 - 921 (921/921)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
IPR002404 : Insulin receptor substrate-1, PTB
GO :
0005158 : Molecular Function : insulin receptor binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, nucl 9, mito 9, cyto 8, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015928)
HIX0015928
HIT000588689 (
ENST00000484860
)
(Conserved hypothetical protein.)
genome : 53,171,472 - 53,172,096 (625)
query : 1 - 394 (394/394)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, mito 3, cyto 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015928)
HIX0015928
HIT000023956
(
AL050069
)
(Insulin receptor substrate-1, PTB domain containing protein.)
genome : 53,171,528 - 53,267,708 (96,181)
query : 1 - 1,489 (1,489/1,510)
7 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 0.999
InterPro :
IPR002404 : Insulin receptor substrate-1, PTB
GO :
0005158 : Molecular Function : insulin receptor binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16, nucl 9, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015928)
HIX0213126
HIT000615683 (
ENST00000516280
)
(Non-protein coding transcript.)
genome : 53,476,227 - 53,476,351 (125)
query : 1 - 125 (125/125)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213126)
HIX0034161
HIT000197983_05 (
NM_000976
)
(Ribosomal protein L11/L12 family protein.)
genome : 53,691,095 - 53,691,717 (623)
query : 28 - 651 (624/674)
1 exon
identity = 0.979
5'(0.979)3'
coverage = 0.945
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29.5, cyto_nucl 16
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034161)
HIX0034161
HIT000314699_05 (
ENST00000361436
)
(Ribosomal protein L11/L12 family protein.)
genome : 53,691,095 - 53,691,717 (623)
query : 1 - 624 (624/633)
1 exon
identity = 0.979
5'(0.979)3'
coverage = 0.986
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034161)
HIX0034161
HIT000586032_04 (
ENST00000482081
)
(Ribosomal protein L11/L12 family protein.)
genome : 53,691,095 - 53,691,653 (559)
query : 1 - 560 (560/580)
1 exon
identity = 0.963
5'(0.962)3'
coverage = 0.966
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034161)
HIX0034161
HIT000635413_05 (
ENST00000536368
)
(Ribosomal protein L11/L12 family protein.)
genome : 53,691,127 - 53,691,717 (591)
query : 1 - 493 (493/499)
2 exons
identity = 0.980
5'(0.982;0.979)3'
coverage = 0.988
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034161)
HIX0034161
HIT000476612_06 (
ENST00000393148
)
(Ribosomal protein L11/L12 family protein.)
genome : 53,691,155 - 53,691,685 (531)
query : 1 - 529 (529/529)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034161)
HIX0034161
HIT000530563 (
ENST00000432629
)
(Ribosomal protein L11/L12 family protein.)
genome : 53,691,183 - 53,691,679 (497)
query : 1 - 497 (497/497)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 14.5, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034161)
HIX0034161
HIT000581173_05 (
ENST00000477007
)
(Ribosomal protein L11/L12 family protein.)
genome : 53,691,183 - 53,691,679 (497)
query : 1 - 496 (496/496)
1 exon
identity = 0.964
5'(0.964)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034161)
HIX0034161
HIT000587877_02 (
ENST00000484010
)
(Ribosomal protein L11, N-terminal domain containing protein.)
genome : 53,691,183 - 53,691,676 (494)
query : 1 - 494 (494/494)
1 exon
identity = 0.952
5'(0.952)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034161)
HIX0034161
HIT000712565_04 (
ENST00000600823
)
(Ribosomal protein L11/L12 family protein.)
genome : 53,691,183 - 53,691,653 (471)
query : 1 - 472 (472/495)
1 exon
identity = 0.968
5'(0.968)3'
coverage = 0.954
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034161)
HIX0018610
HIT000012664
(
AK056050
)
Representative transcript
(Conserved hypothetical protein.)
genome : 54,036,874 - 54,043,735 (6,862)
query : 1 - 2,291 (2,291/2,291)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018610)
HIX0018610
HIT000531700 (
ENST00000433766
)
(Conserved hypothetical protein.)
genome : 54,036,874 - 54,043,735 (6,862)
query : 1 - 2,290 (2,290/2,290)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018610)
HIX0174670
HIT000710212 (
ENST00000598445
)
(Hypothetical short protein.)
genome : 54,039,558 - 54,043,230 (3,673)
query : 1 - 841 (841/841)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 9.33333, nucl 8.5, cyto 5,
cyto_pero 4.16667, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174670)
HIX0174670
HIT000514124 (
ENST00000416190
)
(Hypothetical protein.)
genome : 54,039,581 - 54,084,752 (45,172)
query : 1 - 1,340 (1,340/1,340)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 8.5, cyto_nucl 8, nucl 6.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174670)
HIX0174670
HIT000548557 (
ENST00000450623
)
(Hypothetical short protein.)
genome : 54,039,603 - 54,043,328 (3,726)
query : 1 - 613 (613/613)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 13, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174670)
HIX0174670
HIT000708612 (
ENST00000596828
)
(Conserved hypothetical protein.)
genome : 54,039,908 - 54,043,230 (3,323)
query : 1 - 1,005 (1,005/1,005)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, plas 7.5, extr_plas 5.5, mito 3.5,
E.R._mito 3, extr 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174670)
AC005220.1
52500001-52645290 F -
NCBI
AC004501.1
52645291-52683412 F +
NCBI
AL354801.5
52683413-52714475 F +
NCBI
AL138805.8
52714476-52793969 F +
NCBI
AL133335.29
52793970-52895830 F +
NCBI
AL389883.9
52895831-53010262 F +
NCBI
AL121922.16
53010263-53047636 F +
NCBI
AL442131.2
53047637-53050259 F +
NCBI
AL162292.20
53050260-53150541 F +
NCBI
AL118501.22
53150542-53267105 F +
NCBI
AL035667.12
53267106-53402395 F +
NCBI
AL133420.28
53402396-53487015 F +
NCBI
AL138809.18
53487016-53581625 F +
NCBI
AL162294.8
53581626-53642671 F +
NCBI
AL121593.10
53642672-53760721 F +
NCBI
AL158015.9
53760722-53866744 F +
NCBI
AL035663.18
53866745-53971080 F +
NCBI
AL161801.11
53971081-53978606 F +
NCBI
AL121826.11
53978607-54100000 F +
NCBI