bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0175366
HIT000555499 (
ENST00000457565
)
(Conserved hypothetical protein.)
genome : 14,371,997 - 14,389,013 (17,017)
query : 1 - 323 (323/323)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 12, cyto 11, extr 10, cyto_pero 8.16667,
nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175366)
HIX0175366
HIT000544222_03 (
ENST00000446288
)
(Hypothetical protein.)
genome : 14,372,001 - 14,410,703 (38,703)
query : 1 - 505 (505/507)
5 exons
identity = 0.978
3'(0.984;0.986;0.959;0.935;0.988)5'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, nucl 7, mito 7, cyto_pero 7, cyto_plas 7,
mito_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175366)
HIX0040881
HIT000094455
(
BC036510
)
Representative transcript
(Ankyrin repeat domain-containing protein 20B; Ankyrin repeat domain-containing protein 20A pseudogene;)
genome : 14,410,481 - 14,424,439 (13,959)
query : 5 - 3,259 (3,255/3,274)
5 exons
identity = 0.994
5'(0.996;1.000;0.994;1.000;0.997)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : BT026252
Canis
sp. (Dog) : XM_534548
Pan
sp. (Chimpanzee) : XR_022447
HIX0040881
HIT000545795 (
ENST00000447861
)
(Ankyrin repeat domain-containing protein 26;)
genome : 14,410,481 - 14,424,439 (13,959)
query : 1 - 3,260 (3,260/3,260)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000585657_04 (
ENST00000481691
)
(Ankyrin repeat domain-containing protein 30A.)
genome : 14,410,481 - 14,424,439 (13,959)
query : 1 - 3,253 (3,253/3,253)
5 exons
identity = 0.978
5'(0.985;0.957;0.978;0.985;0.985)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 19.5, E.R._mito 11, extr 4, nucl 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000563093 (
NR_026916
)
(Ankyrin repeat domain-containing protein 30A.)
genome : 14,410,487 - 14,490,570 (80,084)
query : 1 - 3,417 (3,417/3,438)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, nucl 3, cyto_mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000533678 (
ENST00000435744
)
(Ankyrin repeat domain-containing protein 30B.)
genome : 14,410,529 - 14,439,354 (28,826)
query : 1 - 1,610 (1,610/1,610)
11 exons
identity = 0.987
5'(1.000;1.000;1.000;1.000;0.979;0.923;0.962;
0.984;0.939;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000389519
(
BC127901
)
(Ankyrin repeat domain-containing protein 30B.)
genome : 14,410,651 - 14,418,742 (8,092)
query : 1 - 1,354 (1,354/1,354)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, nucl 5.5, cyto_nucl 4.5, cyto 2.5, mito 2,
lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000607905_04 (
ENST00000507941
)
(Ankyrin repeat domain-containing protein 30B.)
genome : 14,410,651 - 14,418,742 (8,092)
query : 1 - 1,354 (1,354/1,354)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, nucl 5.5, cyto_nucl 4.5, cyto 2.5, mito 2,
lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000575496_03 (
ENST00000471048
)
(Ankyrin repeat domain-containing protein 30A; Serologically defined breast cancer antigen NY-BR-1;)
genome : 14,410,651 - 14,418,741 (8,091)
query : 1 - 677 (677/677)
5 exons
identity = 0.978
5'(0.990;0.957;0.983;0.963;0.989)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000666569_04 (
ENST00000553170
)
(Ankyrin repeat domain-containing protein 30B.)
genome : 14,410,675 - 14,417,529 (6,855)
query : 1 - 291 (291/291)
3 exons
identity = 0.959
5'(0.972;0.948;0.978)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10, cyto_nucl 7.5, nucl 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000705941_02 (
ENST00000594133
)
(Ankyrin repeat domain-containing protein 30A.)
genome : 14,410,696 - 14,424,277 (13,582)
query : 1 - 819 (819/819)
7 exons
identity = 0.952
5'(0.960;0.965;0.948;0.929;0.944;0.938;0.975)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 12.5, cyto 12, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000483217_04 (
ENST00000400231
)
(Ankyrin repeat domain-containing protein 30A.)
genome : 14,414,785 - 14,418,697 (3,913)
query : 1 - 574 (574/591)
4 exons
identity = 0.951
5'(0.954;0.943;0.963;0.950)3'
coverage = 0.971
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 11.5, extr 8, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000623592_04 (
ENST00000524329
)
(Ankyrin repeat domain-containing protein 30A.)
genome : 14,414,824 - 14,424,207 (9,384)
query : 1 - 714 (714/714)
6 exons
identity = 0.954
5'(0.956;0.943;0.963;0.939;0.969;0.978)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 11.5, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000575839_04 (
ENST00000471407
)
(Ankyrin repeat domain-containing protein 30A.)
genome : 14,415,105 - 14,424,439 (9,335)
query : 1 - 665 (665/665)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 14, cyto_nucl 8.83333,
cyto_plas 7.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000079495
(
AF427490
)
(Ankyrin repeat domain-containing protein 30A.)
genome : 14,415,105 - 14,424,332 (9,228)
query : 1 - 558 (558/579)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 14, cyto_nucl 8.83333,
cyto_plas 7.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000388770
(
BC126178
)
(Conserved hypothetical protein.)
genome : 14,417,482 - 14,424,277 (6,796)
query : 6 - 341 (336/341)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.985
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000388768
(
BC126176
)
(Conserved hypothetical protein.)
genome : 14,417,482 - 14,424,271 (6,790)
query : 6 - 335 (330/335)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.985
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000570549_05 (
ENST00000465868
)
(Ankyrin repeat domain-containing protein 30A.)
genome : 14,419,510 - 14,424,756 (5,247)
query : 1 - 1,253 (1,253/1,253)
3 exons
identity = 0.983
5'(0.975;0.985;0.989)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 13, nucl 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000391760
(
DQ179138
)
(Ankyrin repeat domain-containing protein 30B.)
genome : 14,424,180 - 14,433,149 (8,970)
query : 1 - 1,206 (1,206/1,206)
2 exons
identity = 0.992
5'(0.988;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 10.5, extr 9, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000391761
(
DQ179139
)
(Ankyrin repeat domain-containing protein 30B.)
genome : 14,433,091 - 14,439,354 (6,264)
query : 1 - 940 (940/940)
4 exons
identity = 0.994
5'(1.000;0.992;0.991;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9, nucl 4, mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000261265
(
BC063890
)
(Conserved hypothetical protein.)
genome : 14,435,262 - 14,440,186 (4,925)
query : 1 - 2,537 (2,537/2,610)
3 exons
identity = 0.988
5'(0.986;0.990;0.976)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000391763
(
DQ179141
)
(Conserved hypothetical protein.)
genome : 14,439,268 - 14,490,570 (51,303)
query : 1 - 632 (632/653)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, mito 8, cyto_nucl 8, extr 6, cyto_mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0040881
HIT000391762
(
DQ179140
)
(Hypothetical short protein.)
genome : 14,439,268 - 14,450,725 (11,458)
query : 1 - 394 (394/416)
2 exons
identity = 0.997
5'(0.990;1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 3, cyto_nucl 3, nucl 2.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040881)
HIX0041053
HIT000537649_04 (
ENST00000439715
)
(Hypothetical protein.)
genome : 14,467,620 - 14,469,245 (1,626)
query : 1 - 1,626 (1,626/1,626)
1 exon
identity = 0.983
3'(0.983)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041053)
HIX0041053
HIT000525235 (
ENST00000427301
)
(Conserved hypothetical protein.)
genome : 14,467,626 - 14,486,111 (18,486)
query : 1 - 3,216 (3,216/3,216)
3 exons
identity = 0.998
3'(1.000;0.907;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041053)
HIX0175204
HIT000689290_05 (
ENST00000577336
)
(Hypothetical protein.)
genome : 14,492,561 - 14,493,128 (568)
query : 1 - 569 (569/569)
1 exon
identity = 0.988
5'(0.988)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 6.5, mito 6, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175204)
HIX0175204
HIT000522189 (
ENST00000424255
)
(Conserved hypothetical protein.)
genome : 14,492,565 - 14,493,128 (564)
query : 1 - 564 (564/564)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10, nucl 9, cyto 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175204)
HIX0175204
HIT000663171_03 (
ENST00000549284
)
(Hypothetical protein.)
genome : 14,492,631 - 14,493,128 (498)
query : 1 - 499 (499/499)
1 exon
identity = 0.964
5'(0.964)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9.5, cyto_nucl 7.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175204)
HIX0227075
HIT000519630_02 (
ENST00000421696
)
(Hypothetical short protein.)
genome : 14,569,594 - 14,576,843 (7,250)
query : 1 - 575 (575/575)
2 exons
identity = 0.988
3'(0.990;0.967)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 11, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227075)
HIX0138630
HIT000460156
(
DQ593625
)
Representative transcript
(Non-protein coding transcript.)
genome : 14,697,470 - 14,697,499 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138630)
HIX0041064
HIT000539763_06 (
ENST00000441829
)
(Fibroblast growth factor family protein.)
genome : 14,721,586 - 14,723,158 (1,573)
query : 1 - 488 (488/488)
2 exons
identity = 0.975
5'(0.981;0.974)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041064)
HIX0041064
HIT000127808_01 (
ENST00000332473
)
(Fibroblast growth factor family protein.)
genome : 14,721,586 - 14,722,969 (1,384)
query : 1 - 296 (296/296)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 8, cyto_plas 8, cyto_golg 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041064)
HIX0041064
HIT000613638_04 (
ENST00000514120
)
(Fibroblast growth factor family protein.)
genome : 14,721,586 - 14,722,969 (1,384)
query : 1 - 227 (227/227)
2 exons
identity = 0.961
5'(0.981;0.944)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 11.5, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041064)
HIX0041064
HIT000694708_03 (
ENST00000582820
)
(Fibroblast growth factor family protein.)
genome : 14,721,591 - 14,722,964 (1,374)
query : 1 - 288 (288/288)
2 exons
identity = 0.979
5'(0.990;0.974)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.5, nucl 3.5, mito 2, pero 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041064)
HIX0227092
HIT000694845_02 (
ENST00000582962
)
(Hypothetical short protein.)
genome : 14,727,628 - 14,734,131 (6,504)
query : 1 - 497 (497/499)
4 exons
identity = 0.986
3'(0.986;1.000;0.960;1.000)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cysk 10, nucl 4, mito 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227092)
HIX0213235
HIT000639106_02 (
ENST00000540061
)
(B melanoma antigen family protein.)
genome : 14,741,931 - 14,743,917 (1,987)
query : 15 - 144 (130/144)
2 exons
identity = 0.985
3'(1.000;0.981)5'
coverage = 0.903
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 3, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213235)
HIX0175128
HIT000441714_08
(
DQ575183
)
Representative transcript
(Non-protein coding transcript.)
genome : 14,752,746 - 14,752,775 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175128)
HIX0041054
HIT000548986 (
ENST00000451052
)
(Conserved hypothetical protein.)
genome : 14,756,570 - 14,800,094 (43,525)
query : 1 - 2,186 (2,186/2,186)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041054)
HIX0041054
HIT000118238 (
ENST00000309142
)
(Conserved hypothetical protein.)
genome : 14,756,570 - 14,760,261 (3,692)
query : 1 - 1,272 (1,272/1,272)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041054)
HIX0213193
HIT000659427_03 (
NR_036164
)
(Non-protein coding transcript.)
genome : 14,778,705 - 14,778,781 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213193)
HIX0213193
HIT000691266_03 (
ENST00000579337
)
(Non-protein coding transcript.)
genome : 14,778,705 - 14,778,781 (77)
query : 1 - 79 (79/79)
1 exon
identity = 0.962
3'(0.962)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213193)
HIX0213193
HIT000692220_03 (
ENST00000580304
)
(Non-protein coding transcript.)
genome : 14,778,705 - 14,778,781 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213193)
HIX0213193
HIT000693009_03 (
ENST00000581101
)
(Non-protein coding transcript.)
genome : 14,778,705 - 14,778,781 (77)
query : 1 - 77 (77/77)
1 exon
identity = 0.987
3'(0.987)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213193)
HIX0213193
HIT000691318_03 (
ENST00000579389
)
(Non-protein coding transcript.)
genome : 14,778,706 - 14,778,780 (75)
query : 1 - 75 (75/75)
1 exon
identity = 0.973
3'(0.973)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213193)
HIX0227091
HIT000693025_02 (
ENST00000581117
)
(Hypothetical protein.)
genome : 14,783,709 - 14,792,481 (8,773)
query : 1 - 586 (586/586)
2 exons
identity = 0.973
5'(0.949;0.977)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 8, cyto_nucl 7.66667, cyto 5,
cyto_pero 4.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227091)
HIX0175205
HIT000695024_04 (
ENST00000583143
)
(Hypothetical protein.)
genome : 14,815,673 - 14,834,738 (19,066)
query : 1 - 541 (541/541)
5 exons
identity = 0.952
3'(0.975;0.955;0.940;0.938;0.974)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175205)
HIX0175205
HIT000522224 (
ENST00000424290
)
(Conserved hypothetical protein.)
genome : 14,815,694 - 14,861,497 (45,804)
query : 1 - 697 (697/697)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7, extr_plas 7, mito 5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175205)
HIX0175205
HIT000673926_02 (
ENST00000560687
)
(GTF2I-like repeat containing protein.)
genome : 14,823,673 - 14,830,252 (6,580)
query : 1 - 495 (495/495)
4 exons
identity = 0.952
3'(0.941;0.973;0.920;0.958)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 7.5, cyto 7, mito_pero 7, extr 6,
E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175205)
HIX0175205
HIT000667807_05 (
ENST00000554443
)
(GTF2I-like repeat containing protein.)
genome : 14,823,882 - 14,824,064 (183)
query : 1 - 182 (182/182)
1 exon
identity = 0.962
3'(0.962)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 15, cyto_plas 12.1667, nucl 5.5,
extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175205)
HIX0175147
HIT000506077 (
ENST00000407739
)
(Vomeronasal receptor, type 1 family protein.)
genome : 14,848,692 - 14,849,584 (893)
query : 1 - 893 (893/893)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, extr 6, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175147)
HIX0196805
HIT000542835 (
ENST00000444901
)
(Sorting nexin, C-terminal domain containing protein.)
genome : 14,897,920 - 14,900,900 (2,981)
query : 1 - 2,981 (2,981/2,981)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 8, cyto_nucl 8, cyto 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196805)
HIX0196805
HIT000692113_03 (
ENST00000580193
)
(Sorting nexin, C-terminal domain containing protein.)
genome : 14,897,920 - 14,900,900 (2,981)
query : 1 - 2,975 (2,975/2,975)
1 exon
identity = 0.985
5'(0.985)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 7, cyto 6, mito 4.5, E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196805)
HIX0196805
HIT000442965_06
(
DQ576434
)
Representative transcript
(Non-protein coding transcript.)
genome : 14,898,518 - 14,898,548 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196805)
HIX0059806
HIT000690780_03 (
ENST00000578842
)
(Hypothetical protein.)
genome : 14,916,531 - 14,917,579 (1,049)
query : 1 - 1,048 (1,048/1,048)
1 exon
identity = 0.990
3'(0.990)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059806)
HIX0059806
HIT000529763 (
ENST00000431829
)
(Conserved hypothetical protein.)
genome : 14,916,603 - 14,917,506 (904)
query : 1 - 904 (904/904)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059806)
HIX0175218
HIT000525380 (
ENST00000427446
)
(Conserved hypothetical protein.)
genome : 14,918,354 - 14,930,782 (12,429)
query : 1 - 504 (504/504)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175218)
HIX0175146
HIT000505634 (
ENST00000406538
)
(Olfactory receptor family protein.)
genome : 14,953,365 - 14,954,325 (961)
query : 1 - 961 (961/961)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175146)
HIX0175146
HIT000692152_03 (
ENST00000580232
)
(Olfactory receptor family protein.)
genome : 14,953,381 - 14,954,325 (945)
query : 1 - 945 (945/945)
1 exon
identity = 0.986
3'(0.986)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175146)
HIX0040905
HIT000683067_04 (
ENST00000570157
)
(POTE ankyrin domain family member B-like.)
genome : 14,982,095 - 14,987,829 (5,735)
query : 2 - 502 (501/502)
4 exons
identity = 0.974
5'(0.951;0.974;0.991;0.973)3'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12.5, cyto_mito 11.5, cyto 7.5, extr 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040905)
HIX0040905
HIT000262401_02
(
BC066981
)
(POTE ankyrin domain family member J.)
genome : 14,982,179 - 14,997,864 (15,686)
query : 1 - 1,989 (1,989/2,040)
8 exons
identity = 0.973
5'(0.975;0.983;0.977;0.981;1.000;1.000;0.938;
0.962)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, E.R._mito 6.66667, mito_pero 6.16667,
mito 5.5, pero 4, extr 3.5, extr_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040905)
HIX0040905
HIT000320361_02 (
NM_207355
)
(POTE ankyrin domain family member B; ANKRD26-like family B member 1; Prostate, ovary, testis-expressed protein on chromosome 15; POTE-15;)
genome : 14,982,183 - 15,013,906 (31,724)
query : 1 - 2,132 (2,132/2,132)
11 exons
identity = 0.978
5'(0.976;0.991;0.983;0.991;1.000;1.000;1.000;
1.000;0.994;0.960;0.938)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, E.R._mito 6.66667, cyto_pero 6.66667,
plas 5.5, mito 5.5, mito_pero 4.66667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040905)
HIX0040905
HIT000115369 (
ENST00000299443
)
(POTE ankyrin domain family member D; ANKRD26-like family B member 3; Ankyrin repeat domain-containing protein 21; Prostate, ovary, testis-expressed protein; Protein POTE;)
genome : 14,982,498 - 15,013,906 (31,409)
query : 1 - 1,826 (1,826/1,826)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11.5, nucl 6.5, E.R._mito 4,
mito 3.5, plas 2.5, extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040905)
HIX0040905
HIT000215225 (
NM_174981
)
(POTE ankyrin domain family member D; ANKRD26-like family B member 3; Ankyrin repeat domain-containing protein 21; Prostate, ovary, testis-expressed protein; Protein POTE;)
genome : 14,982,498 - 15,013,906 (31,409)
query : 1 - 1,826 (1,826/1,826)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11.5, nucl 6.5, E.R._mito 4,
mito 3.5, plas 2.5, extr_plas 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040905)
HIX0040905
HIT000724032_01 (
NM_001257362
)
(POTE ankyrin domain family member D; ANKRD26-like family B member 3; Ankyrin repeat domain-containing protein 21; Prostate, ovary, testis-expressed protein; Protein POTE;)
genome : 14,982,498 - 15,013,906 (31,409)
query : 1 - 1,826 (1,826/1,826)
11 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, nucl 6.5, E.R._mito 4,
mito 3.5, plas 2.5, extr_plas 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040905)
HIX0040905
HIT000254844_02
(
AY465173
)
Representative transcript
(POTE ankyrin domain family member B; ANKRD26-like family B member 1; Prostate, ovary, testis-expressed protein on chromosome 15; POTE-15;)
genome : 14,982,502 - 15,013,906 (31,405)
query : 1 - 1,813 (1,813/1,813)
11 exons
identity = 0.979
5'(0.979;0.991;0.977;0.991;1.000;1.000;1.000;
1.000;0.994;0.960;0.938)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, E.R._mito 6.66667, cyto_pero 6.66667,
plas 5.5, mito 5.5, mito_pero 4.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040905)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : BT026252
HIX0040905
HIT000389181_02
(
BC127123
)
(POTE ankyrin domain family member B; ANKRD26-like family B member 1; Prostate, ovary, testis-expressed protein on chromosome 15; POTE-15;)
genome : 14,982,517 - 15,013,913 (31,397)
query : 1 - 1,805 (1,805/1,806)
11 exons
identity = 0.976
5'(0.978;0.991;0.983;0.991;1.000;1.000;1.000;
1.000;0.994;0.960;0.919)3'
coverage = 0.999
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, E.R._mito 6.66667, cyto_pero 6.66667,
plas 5.5, mito 5.5, mito_pero 4.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040905)
HIX0040905
HIT000336418_02
(
BC101006
)
(POTE ankyrin domain family member B; ANKRD26-like family B member 1; Prostate, ovary, testis-expressed protein on chromosome 15; POTE-15;)
genome : 14,982,517 - 15,013,906 (31,390)
query : 1 - 1,798 (1,798/1,798)
11 exons
identity = 0.978
5'(0.978;0.991;0.983;0.991;1.000;1.000;0.986;
1.000;0.994;0.968;0.929)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, E.R._mito 6.66667, cyto_pero 6.66667,
plas 5.5, mito 5.5, mito_pero 4.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040905)
HIX0040905
HIT000533331_03 (
ENST00000435397
)
(POTE ankyrin domain family member B-like.)
genome : 14,982,517 - 15,013,906 (31,390)
query : 1 - 1,478 (1,478/1,478)
10 exons
identity = 0.972
5'(0.964;0.977;0.991;0.983;0.981;1.000;1.000;
0.994;0.968;0.929)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10, cyto_nucl 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040905)
HIX0040905
HIT000535997_03 (
ENST00000438063
)
(POTE ankyrin domain family member B-like.)
genome : 14,982,517 - 15,013,906 (31,390)
query : 1 - 1,478 (1,478/1,478)
10 exons
identity = 0.972
5'(0.964;0.977;0.991;0.983;0.981;1.000;1.000;
0.994;0.968;0.929)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10, cyto_nucl 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040905)
HIX0040905
HIT000725409_03 (
NM_001277303
)
(POTE ankyrin domain family member B-like.)
genome : 14,982,517 - 15,013,906 (31,390)
query : 1 - 1,687 (1,687/1,687)
12 exons
identity = 0.975
5'(0.964;0.977;0.991;0.983;0.981;0.993;1.000;
1.000;1.000;0.994;0.968;0.929)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, E.R._mito 6.66667, mito 5.5,
mito_pero 4.66667, plas 4.5, extr_plas 4, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040905)
HIX0040905
HIT000725410_03 (
NM_001277304
)
(POTE ankyrin domain family member B-like.)
genome : 14,982,517 - 15,013,906 (31,390)
query : 1 - 1,687 (1,687/1,687)
12 exons
identity = 0.975
5'(0.964;0.977;0.991;0.983;0.981;0.993;1.000;
1.000;1.000;0.994;0.968;0.929)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, E.R._mito 6.66667, mito 5.5,
mito_pero 4.66667, plas 4.5, extr_plas 4, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040905)
HIX0040905
HIT000727801_03 (
NR_102390
)
(POTE ankyrin domain family member B-like.)
genome : 14,982,517 - 15,013,906 (31,390)
query : 1 - 1,478 (1,478/1,478)
10 exons
identity = 0.972
5'(0.964;0.977;0.991;0.983;0.981;1.000;1.000;
0.994;0.968;0.929)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10, cyto_nucl 7, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040905)
HIX0040905
HIT000727802_03 (
NR_102391
)
(POTE ankyrin domain family member B-like.)
genome : 14,982,517 - 15,013,906 (31,390)
query : 1 - 1,478 (1,478/1,478)
10 exons
identity = 0.972
5'(0.964;0.977;0.991;0.983;0.981;1.000;1.000;
0.994;0.968;0.929)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10, cyto_nucl 7, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040905)
HIX0040905
HIT000667036_03 (
ENST00000553662
)
(POTE ankyrin domain family member B.)
genome : 14,982,718 - 14,997,864 (15,147)
query : 1 - 1,450 (1,450/1,450)
8 exons
identity = 0.970
5'(0.966;0.991;0.983;0.981;0.993;1.000;0.930;
0.970)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 8.5, cyto_nucl 7.5, cyto 5.5,
E.R._mito 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040905)
HIX0213238
HIT000659428_02 (
NR_036165
)
(Non-protein coding transcript.)
genome : 15,017,096 - 15,017,171 (76)
query : 1 - 76 (76/76)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213238)
HIX0213238
HIT000690912_01 (
ENST00000578976
)
(Non-protein coding transcript.)
genome : 15,017,096 - 15,017,171 (76)
query : 1 - 76 (76/76)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213238)
HIX0213238
HIT000693688_01 (
ENST00000581787
)
(Non-protein coding transcript.)
genome : 15,017,096 - 15,017,171 (76)
query : 1 - 76 (76/76)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213238)
HIX0175127
HIT000439287_04
(
DQ572756
)
Representative transcript
(Non-protein coding transcript.)
genome : 15,022,385 - 15,022,416 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175127)
HIX0175138
HIT000467282_04
(
DQ600751
)
Representative transcript
(Non-protein coding transcript.)
genome : 15,022,496 - 15,022,526 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175138)
HIX0175141
HIT000693361_03 (
ENST00000581457
)
(Hypothetical protein.)
genome : 15,026,352 - 15,049,650 (23,299)
query : 1 - 1,955 (1,955/1,955)
4 exons
identity = 0.988
5'(0.997;1.000;1.000;0.985)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175141)
HIX0175141
HIT000672739_04 (
ENST00000559474
)
(Non-protein coding transcript.)
genome : 15,026,492 - 15,026,675 (184)
query : 1 - 187 (187/187)
1 exon
identity = 0.968
5'(0.968)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175141)
HIX0227054
HIT000690128_03 (
ENST00000578182
)
(Hypothetical protein.)
genome : 15,038,181 - 15,039,876 (1,696)
query : 1 - 1,232 (1,232/1,232)
2 exons
identity = 0.977
3'(0.984;0.970)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 8, cyto 7, extr 5, cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227054)
HIX0203149
HIT000533115_01 (
ENST00000435181
)
(Hypothetical protein.)
genome : 15,038,189 - 15,039,867 (1,679)
query : 1 - 1,110 (1,110/1,110)
2 exons
identity = 0.997
5'(0.998;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 10, nucl 7, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203149)
HIX0227054
HIT000670304_03 (
ENST00000556999
)
(Non-protein coding transcript.)
genome : 15,038,190 - 15,038,433 (244)
query : 1 - 244 (244/244)
1 exon
identity = 0.975
3'(0.975)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227054)
HIX0227054
HIT000670543_03 (
ENST00000557243
)
(Hypothetical protein.)
genome : 15,038,203 - 15,039,866 (1,664)
query : 1 - 761 (761/761)
3 exons
identity = 0.965
3'(0.974;0.984;0.957)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 8, cyto_nucl 5.66667, nucl 5.5,
cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227054)
HIX0227054
HIT000671012_03 (
ENST00000557717
)
(Hypothetical protein.)
genome : 15,039,416 - 15,039,875 (460)
query : 1 - 460 (460/460)
1 exon
identity = 0.963
3'(0.963)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 7.16667, extr 7, cyto 7,
cyto_pero 5.16667, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227054)
HIX0175141
HIT000481325_02 (
ENST00000398098
)
(Hypothetical protein.)
genome : 15,048,343 - 15,049,437 (1,095)
query : 1 - 1,095 (1,095/1,095)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 15.5, nucl 11.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175141)
HIX0175141
HIT000670212_03 (
ENST00000556905
)
(Hypothetical protein.)
genome : 15,048,350 - 15,049,436 (1,087)
query : 2 - 1,089 (1,088/1,089)
1 exon
identity = 0.963
5'(0.963)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175141)
HIX0196791
HIT000045550_02
(
AK125677
)
Representative transcript
(Spidroin-1; Dragline silk fibroin 1; Fragment;)
genome : 15,051,621 - 15,053,459 (1,839)
query : 1 - 1,839 (1,839/1,839)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 10.5, cyto 7.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196791)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001142949
HIX0196791
HIT000706017_01 (
ENST00000594210
)
(Spidroin-1; Dragline silk fibroin 1; Fragment;)
genome : 15,051,621 - 15,053,459 (1,839)
query : 1 - 1,839 (1,839/1,839)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 10.5, cyto 7.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196791)
HIX0196791
HIT000708296_01 (
ENST00000596508
)
(Spidroin-1; Dragline silk fibroin 1; Fragment;)
genome : 15,051,621 - 15,053,459 (1,839)
query : 1 - 1,839 (1,839/1,839)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 10.5, cyto 7.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196791)
HIX0196791
HIT000708728_01 (
ENST00000596945
)
(Spidroin-1; Dragline silk fibroin 1; Fragment;)
genome : 15,051,621 - 15,053,459 (1,839)
query : 1 - 1,839 (1,839/1,839)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 10.5, cyto 7.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196791)
HIX0196791
HIT000705976_03 (
ENST00000594169
)
(Hypothetical protein.)
genome : 15,053,373 - 15,054,055 (683)
query : 1 - 681 (681/681)
1 exon
identity = 0.953
3'(0.953)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196791)
HIX0196791
HIT000707294_03 (
ENST00000595502
)
(Hypothetical protein.)
genome : 15,053,373 - 15,054,055 (683)
query : 1 - 681 (681/681)
1 exon
identity = 0.956
3'(0.956)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196791)
HIX0227086
HIT000672881_03 (
ENST00000559621
)
(Hypothetical short protein.)
genome : 15,078,482 - 15,092,643 (14,162)
query : 1 - 748 (748/748)
2 exons
identity = 0.951
5'(0.916;0.960)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 5, mito 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227086)
3000000
13500001-14288129 N
50000
14288130-14338129 N
AP001464.1
14338130-14444688 F +
NCBI
AJ239321.3
14444689-14556496 F -
NCBI
AP001170.2
14556497-14592460 F +
NCBI
AP001135.3
14592461-14602602 F +
NCBI
AJ239318.3
14602603-14691402 F +
NCBI
AL049911.2
14691403-14736983 F -
NCBI
AL050302.2
14736984-14808278 F -
NCBI
AL078475.2
14808279-14914572 F +
NCBI
AP001465.1
14914573-15018357 F +
NCBI
AL050303.4
15018358-15100000 F +
NCBI