bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0016112
HIT000723577 (
NM_001256295
)
(Protein C-ets-2;)
genome : 40,177,231 - 40,196,877 (19,647)
query : 1 - 3,934 (3,934/3,954)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000313633 (
ENST00000360214
)
(Protein C-ets-2;)
genome : 40,177,231 - 40,196,879 (19,649)
query : 1 - 3,936 (3,936/3,936)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000021696
(
AK096841
)
(Protein C-ets-2;)
genome : 40,177,231 - 40,195,720 (18,490)
query : 1 - 2,777 (2,777/2,777)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000191236
(
J04102
)
(Protein C-ets-2;)
genome : 40,177,755 - 40,195,380 (17,626)
query : 2 - 2,269 (2,268/2,269)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000201945 (
NM_005239
)
(Protein C-ets-2;)
genome : 40,177,755 - 40,196,877 (19,123)
query : 1 - 3,764 (3,764/3,784)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000314236 (
ENST00000360938
)
(Protein C-ets-2;)
genome : 40,177,755 - 40,196,879 (19,125)
query : 1 - 3,766 (3,766/3,766)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000052766
(
BC042954
)
Representative transcript
(Protein C-ets-2;)
genome : 40,177,853 - 40,195,723 (17,871)
query : 1 - 2,512 (2,512/2,527)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK128933
Danio
sp. (Zebrafish) : BC095899
Bos
sp. (Cow) : BC126692
Pongo
sp. (Orangutan) : CR860643
Equus
sp. (Horse) : ENSECAT00000022937
Gallus
sp. (Chicken) : ENSGALT00000025873
Rattus
sp. (Rat) : XM_001053903
Macaca
sp. (Macaque) : XM_001109324
Pan
sp. (Chimpanzee) : XM_001170871
Monodelphis
sp. (Opossum) : XM_001363017
Canis
sp. (Dog) : XM_854540
HIX0016112
HIT000434429
(
AK315563
)
(Protein C-ets-2;)
genome : 40,177,854 - 40,194,813 (16,960)
query : 1 - 1,603 (1,603/1,603)
10 exons
identity = 0.999
5'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000530212 (
ENST00000432278
)
(Protein C-ets-2;)
genome : 40,177,875 - 40,186,905 (9,031)
query : 1 - 1,033 (1,033/1,033)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, nucl 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000037802
(
BC017040
)
(Protein C-ets-2;)
genome : 40,177,883 - 40,195,723 (17,841)
query : 1 - 2,482 (2,482/2,500)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000085312
(
AY216265
)
(Protein C-ets-2;)
genome : 40,180,034 - 40,183,110 (3,077)
query : 1 - 3,077 (3,077/3,099)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000554900 (
ENST00000456966
)
(Protein C-ets-2;)
genome : 40,181,560 - 40,190,570 (9,011)
query : 1 - 972 (972/972)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 8, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000099758
(
BT006838
)
(Protein C-ets-2;)
genome : 40,181,959 - 40,194,811 (12,853)
query : 1 - 1,408 (1,408/1,410)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000418 : Ets domain
IPR003118 : Pointed domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR013761 : Sterile alpha motif/pointed domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000194135
(
M11922
)
(Protein C-ets-2;)
genome : 40,191,585 - 40,194,813 (3,229)
query : 1 - 441 (441/450)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.980
InterPro :
IPR000418 : Ets domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
HIX0016112
HIT000003010
(
AK000535
)
(Hypothetical short protein.)
genome : 40,195,987 - 40,196,877 (891)
query : 1 - 891 (891/911)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, cysk 6, extr 5, nucl 2.5,
extr_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016112)
AP001040.1
40167055-40192798 F +
NCBI
AP001041.1
40192799-40207054 F +
NCBI