bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0016114
HIT000427480
(
AK308614
)
(Proteasome assembly chaperone 1 isoform a.)
genome : 40,449,071 - 40,555,418 (106,348)
query : 1 - 1,478 (1,478/1,478)
6 exons
identity = 0.997
3'(1.000;1.000;1.000;0.993;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 10, cyto_nucl 9, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0175272
HIT000535196 (
ENST00000437262
)
(K Homology domain, type 1 containing protein.)
genome : 40,543,056 - 40,544,032 (977)
query : 1 - 977 (977/977)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11.5, cyto 9.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175272)
HIX0016114
HIT000127313 (
ENST00000331573
)
(Conserved hypothetical protein.)
genome : 40,546,695 - 40,555,777 (9,083)
query : 1 - 2,154 (2,154/2,154)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000031648
(
BC003619
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,385 - 40,555,357 (7,973)
query : 1 - 1,044 (1,044/1,100)
7 exons
identity = 0.997
3'(0.995;0.993;1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000035428
(
BC011755
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,385 - 40,555,357 (7,973)
query : 1 - 1,044 (1,044/1,100)
7 exons
identity = 0.997
3'(0.995;0.993;1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000035965
(
BC012809
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,385 - 40,555,357 (7,973)
query : 1 - 1,044 (1,044/1,100)
7 exons
identity = 0.997
3'(0.995;0.993;1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000034933
(
BC010424
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,385 - 40,555,349 (7,965)
query : 1 - 1,036 (1,036/1,071)
7 exons
identity = 0.998
3'(0.995;0.993;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000244102
(
AJ006291
)
Representative transcript
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,385 - 40,555,375 (7,991)
query : 1 - 1,061 (1,061/1,080)
7 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;0.993;1.000;0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000200521 (
NM_003720
)
(Conserved hypothetical protein.)
genome : 40,547,372 - 40,555,440 (8,069)
query : 1 - 1,140 (1,140/1,140)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000320049 (
NM_203433
)
(Conserved hypothetical protein.)
genome : 40,547,372 - 40,555,440 (8,069)
query : 1 - 1,077 (1,077/1,077)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, cyto 9, nucl 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000724429 (
NM_001261824
)
(Conserved hypothetical protein.)
genome : 40,547,372 - 40,555,440 (8,069)
query : 1 - 1,125 (1,125/1,125)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 11, cyto 10.5, cyto_nucl 10, nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000727140 (
NR_049728
)
(Conserved hypothetical protein.)
genome : 40,547,372 - 40,555,440 (8,069)
query : 1 - 1,033 (1,033/1,033)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, cyto_nucl 11, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000585876 (
ENST00000481921
)
(Conserved hypothetical protein.)
genome : 40,547,384 - 40,550,746 (3,363)
query : 1 - 716 (716/716)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, cyto 9, extr 6, E.R._mito 6, mito_pero 6,
cyto_golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000003929
(
AK001455
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,388 - 40,555,402 (8,015)
query : 1 - 1,086 (1,086/1,088)
7 exons
identity = 0.997
3'(1.000;0.993;1.000;0.984;1.000;1.000;0.996)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000509762 (
ENST00000411828
)
(Conserved hypothetical protein.)
genome : 40,547,514 - 40,555,213 (7,700)
query : 1 - 959 (959/959)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 9.5, cyto_nucl 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000362178 (
ENST00000380900
)
(Conserved hypothetical protein.)
genome : 40,547,516 - 40,555,414 (7,899)
query : 1 - 907 (907/907)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, cyto 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000434272
(
AK315406
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,516 - 40,555,342 (7,827)
query : 1 - 898 (898/898)
7 exons
identity = 0.999
3'(1.000;1.000;0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 11, cyto_nucl 10, nucl 9.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000079320
(
AF417108
)
(Proteasome assembly chaperone 1 isoform 3.)
genome : 40,547,516 - 40,555,311 (7,796)
query : 1 - 760 (760/760)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.993;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000254836
(
AY463963
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,516 - 40,555,311 (7,796)
query : 1 - 804 (804/804)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;0.993;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, cyto 9, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000268692
(
CR541821
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,516 - 40,555,311 (7,796)
query : 1 - 867 (867/867)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.993;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, cysk 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000529562 (
ENST00000431628
)
(Conserved hypothetical protein.)
genome : 40,547,516 - 40,555,311 (7,796)
query : 1 - 760 (760/760)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000268722
(
CR541852
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,519 - 40,555,311 (7,793)
query : 1 - 864 (864/864)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.993;1.000;0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, cyto_nucl 10.5, cyto 9.5, extr 4, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000487681
(
AB451468
)
(Proteasome assembly chaperone 1; PAC-1; Chromosome 21 leucine-rich protein; C21-LRP; Down syndrome critical region protein 2;)
genome : 40,547,519 - 40,555,311 (7,793)
query : 1 - 801 (801/801)
6 exons
identity = 0.999
3'(1.000;0.993;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, cyto 9, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016114
HIT000427537
(
AK308671
)
(Hypothetical short protein.)
genome : 40,555,118 - 40,556,276 (1,159)
query : 1 - 1,143 (1,143/1,143)
1 exon
identity = 0.985
3'(0.985)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, nucl 2, mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016114)
HIX0016115
HIT000245261
(
AJ238556
)
(Conserved hypothetical protein.)
genome : 40,557,819 - 40,559,624 (1,806)
query : 1 - 1,808 (1,808/1,808)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000245262
(
AJ238573
)
(Hypothetical short protein.)
genome : 40,557,819 - 40,558,612 (794)
query : 1 - 795 (795/795)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.8333, cyto_plas 8.83333,
nucl 6.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000045779
(
AK125906
)
Representative transcript
(Conserved hypothetical protein.)
genome : 40,559,172 - 40,636,867 (77,696)
query : 1 - 4,990 (4,990/4,990)
26 exons
identity = 0.999
3'(1.000;1.000;0.999;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 16, cyto 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000544858 (
ENST00000446924
)
(Conserved hypothetical protein.)
genome : 40,559,172 - 40,636,867 (77,696)
query : 1 - 4,990 (4,990/4,990)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 16, cyto 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0227028
HIT000245260
(
AJ238555
)
Representative transcript
(Hypothetical short protein.)
genome : 40,562,172 - 40,564,246 (2,075)
query : 1 - 2,071 (2,071/2,071)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227028)
HIX0227028
HIT000243963
(
AJ002574
)
(Hypothetical short protein.)
genome : 40,563,209 - 40,563,769 (561)
query : 1 - 576 (576/576)
1 exon
identity = 0.955
3'(0.955)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227028)
HIX0016115
HIT000004651
(
AK002177
)
(Conserved hypothetical protein.)
genome : 40,568,058 - 40,571,409 (3,352)
query : 1 - 2,005 (2,005/2,005)
2 exons
identity = 0.999
3'(0.999;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 8.5, cyto_nucl 6.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000244819
(
AJ222636
)
(Conserved hypothetical protein.)
genome : 40,571,002 - 40,572,212 (1,211)
query : 9 - 660 (652/660)
2 exons
identity = 0.994
3'(0.993;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 14, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000595084 (
ENST00000491564
)
(Conserved hypothetical protein.)
genome : 40,571,345 - 40,572,422 (1,078)
query : 1 - 522 (522/522)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, nucl 2, lyso 2, cyto_pero 2,
cyto_plas 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000242065
(
AB080590
)
(Bromodomain containing protein.)
genome : 40,574,292 - 40,601,318 (27,027)
query : 1 - 1,357 (1,357/1,357)
12 exons
identity = 0.997
3'(0.994;0.994;1.000;0.976;1.000;1.000;1.000;
1.000;1.000;1.000;0.988;1.000)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000522375 (
ENST00000424441
)
(Bromodomain containing protein.)
genome : 40,574,292 - 40,601,318 (27,027)
query : 1 - 1,356 (1,356/1,356)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000578129 (
ENST00000473813
)
(Bromodomain containing protein.)
genome : 40,581,712 - 40,590,586 (8,875)
query : 1 - 944 (944/944)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 6, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0175184
HIT000517258 (
ENST00000419324
)
(Tim10/DDP family zinc finger domain containing protein.)
genome : 40,588,550 - 40,589,432 (883)
query : 1 - 266 (266/266)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175184)
HIX0175260
HIT000533542 (
ENST00000435608
)
(Hypothetical short protein.)
genome : 40,589,032 - 40,591,731 (2,700)
query : 1 - 476 (476/489)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175260)
HIX0175276
HIT000536786 (
ENST00000438852
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 40,607,312 - 40,607,946 (635)
query : 1 - 635 (635/635)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, mito 5, extr 4, E.R._mito 4, plas 3, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175276)
HIX0016115
HIT000242063
(
AB080588
)
(WD40-repeat-containing domain containing protein.)
genome : 40,608,644 - 40,652,139 (43,496)
query : 1 - 1,593 (1,593/1,593)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11.5, nucl 6.5, cysk 5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000242064
(
AB080589
)
(WD40-repeat-containing domain containing protein.)
genome : 40,608,644 - 40,652,139 (43,496)
query : 1 - 1,757 (1,757/1,757)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, nucl 6.5, cysk 5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000242067
(
AB080592
)
(WD40-repeat-containing domain containing protein.)
genome : 40,608,644 - 40,652,139 (43,496)
query : 1 - 1,682 (1,682/1,682)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.990;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 14.5, nucl 6, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000242068
(
AB080593
)
(WD40-repeat-containing domain containing protein.)
genome : 40,608,644 - 40,652,139 (43,496)
query : 1 - 1,656 (1,656/1,656)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
IPR020472 : G-protein beta WD-40 repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, nucl 4.5, mito 3, lyso 2,
cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000528027 (
ENST00000430093
)
(WD40-repeat-containing domain containing protein.)
genome : 40,608,644 - 40,652,139 (43,496)
query : 1 - 1,656 (1,656/1,656)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, nucl 4.5, mito 3, lyso 2,
cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000543179 (
ENST00000445245
)
(WD40-repeat-containing domain containing protein.)
genome : 40,608,644 - 40,652,139 (43,496)
query : 1 - 1,682 (1,682/1,682)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14, nucl 6, extr 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000543602 (
ENST00000445668
)
(WD40-repeat-containing domain containing protein.)
genome : 40,608,644 - 40,652,139 (43,496)
query : 1 - 1,593 (1,593/1,593)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11.5, nucl 6.5, cysk 5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000242066
(
AB080591
)
(WD40-repeat-containing domain containing protein.)
genome : 40,608,645 - 40,652,139 (43,495)
query : 1 - 1,644 (1,644/1,644)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000510538 (
ENST00000412604
)
(WD40-repeat-containing domain containing protein.)
genome : 40,608,645 - 40,652,139 (43,495)
query : 1 - 1,756 (1,756/1,756)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, nucl 6.5, cysk 5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000553801 (
ENST00000455867
)
(WD40-repeat-containing domain containing protein.)
genome : 40,608,645 - 40,652,139 (43,495)
query : 1 - 1,644 (1,644/1,644)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0016115
HIT000600065 (
ENST00000496759
)
(Conserved hypothetical protein.)
genome : 40,650,423 - 40,652,133 (1,711)
query : 1 - 377 (377/377)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 7, mito 6, nucl 5.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016115)
HIX0227010
HIT000092401
(
BC031545
)
(Conserved hypothetical protein.)
genome : 40,668,363 - 40,669,438 (1,076)
query : 1 - 1,075 (1,075/1,127)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227010)
HIX0227010
HIT000098437
(
BC047058
)
(Hypothetical short protein.)
genome : 40,668,365 - 40,669,369 (1,005)
query : 1 - 1,004 (1,004/1,054)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto_nucl 11, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227010)
HIX0227010
HIT000435480
(
BC142986
)
(Bromodomain and WD repeat-containing protein 1 isoform C.)
genome : 40,668,363 - 40,685,558 (17,196)
query : 1 - 2,487 (2,487/2,502)
5 exons
identity = 0.996
3'(0.997;1.000;1.000;1.000;0.984)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11.5, cyto 7.5, nucl 6.5,
extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227010)
HIX0227010
HIT000316409 (
NM_001007246
)
(Bromodomain and WD repeat-containing protein 1; WD repeat-containing protein 9;)
genome : 40,668,363 - 40,685,712 (17,350)
query : 1 - 2,639 (2,639/2,653)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11.5, cyto 7.5, nucl 6.5,
extr_plas 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227010)
HIX0227010
HIT000261521
(
BC064602
)
Representative transcript
(Bromodomain and WD repeat-containing protein 1; WD repeat-containing protein 9;)
genome : 40,668,363 - 40,685,551 (17,189)
query : 1 - 2,474 (2,474/2,488)
5 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;0.984)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11.5, cyto 7.5, nucl 6.5,
extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227010)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179058
Mus
sp. (Mouse) : AJ292467
Bos
sp. (Cow) : BC142396
Gallus
sp. (Chicken) : CR406169
Monodelphis
sp. (Opossum) : ENSMODT00000026699
Oryzias
sp. (Medaka) : ENSORLT00000012982
Pongo
sp. (Orangutan) : ENSPPYT00000013263
Tetraodon
sp. (Tetraodon) : GSTENT00008731001
Takifugu
sp. (Fugu) : SINFRUT00000166671
Rattus
sp. (Rat) : XM_001053799
Pan
sp. (Chimpanzee) : XM_001171002
Danio
sp. (Zebrafish) : XM_001920406
Canis
sp. (Dog) : XM_544889
HIX0227010
HIT000026206
(
AL162036
)
(Conserved hypothetical protein.)
genome : 40,668,369 - 40,669,548 (1,180)
query : 1 - 1,179 (1,179/1,190)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227010)
HIX0227010
HIT000133952 (
ENST00000341322
)
(Bromodomain and WD repeat-containing protein 1; WD repeat-containing protein 9;)
genome : 40,668,363 - 40,685,568 (17,206)
query : 1 - 2,495 (2,495/2,495)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11.5, cyto 7.5, nucl 6.5,
extr_plas 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227010)
HIX0227010
HIT000250224
(
AL109786
)
(Conserved hypothetical protein.)
genome : 40,668,411 - 40,670,268 (1,858)
query : 1 - 1,857 (1,857/1,882)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto_nucl 11, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227010)
HIX0227010
HIT000250223
(
AL109785
)
(Conserved hypothetical protein.)
genome : 40,668,701 - 40,669,853 (1,153)
query : 1 - 1,153 (1,153/1,173)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227010)
HIX0227010
HIT000244818
(
AJ222635
)
(Hypothetical short protein.)
genome : 40,669,438 - 40,669,557 (120)
query : 1 - 119 (119/123)
1 exon
identity = 0.992
3'(0.992)5'
coverage = 0.967
SOSUI :
MEMBRANE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227010)
HIX0227010
HIT000574598 (
ENST00000470108
)
(Bromodomain and WD repeat-containing protein 1; WD repeat-containing protein 9;)
genome : 40,670,016 - 40,693,485 (23,470)
query : 1 - 1,176 (1,176/1,176)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14, cysk 7, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227010)
HIX0227010
HIT000587954 (
ENST00000484090
)
(Non-protein coding transcript.)
genome : 40,684,489 - 40,685,227 (739)
query : 1 - 429 (429/429)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227010)
HIX0203134
HIT000658964 (
NR_033800
)
(Putative uncharacterized protein encoded by BRWD1-IT2; BRWD1 intronic transcript 2;)
genome : 40,685,861 - 40,686,888 (1,028)
query : 1 - 1,028 (1,028/1,028)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 8.5, cyto 7.5, nucl 6.5, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203134)
HIX0203134
HIT000079477
(
AF426265
)
Representative transcript
(Putative uncharacterized protein encoded by BRWD1-IT2; BRWD1 intronic transcript 2;)
genome : 40,685,887 - 40,686,886 (1,000)
query : 1 - 1,000 (1,000/1,000)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 8.5, cyto 7.5, nucl 6.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203134)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000013265
Pan
sp. (Chimpanzee) : XM_001171191
HIX0203134
HIT000390091
(
BC130301
)
(Putative uncharacterized protein encoded by BRWD1-IT2; BRWD1 intronic transcript 2;)
genome : 40,685,888 - 40,686,369 (482)
query : 1 - 482 (482/482)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 8.5, cyto 7.5, nucl 6.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203134)
HIX0203134
HIT000390093
(
BC130303
)
(Putative uncharacterized protein encoded by BRWD1-IT2; BRWD1 intronic transcript 2;)
genome : 40,685,888 - 40,686,369 (482)
query : 1 - 482 (482/482)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 8.5, cyto 7.5, nucl 6.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203134)
HIX0203134
HIT000638856 (
ENST00000539811
)
(Putative uncharacterized protein encoded by BRWD1-IT2; BRWD1 intronic transcript 2;)
genome : 40,685,888 - 40,686,369 (482)
query : 1 - 482 (482/482)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 8.5, cyto 7.5, nucl 6.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203134)
HIX0175199
HIT000521208 (
ENST00000423274
)
(Hypothetical protein.)
genome : 40,687,633 - 40,695,144 (7,512)
query : 1 - 691 (691/691)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 10, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175199)
HIX0175199
HIT000726812 (
NR_046655
)
(Hypothetical protein.)
genome : 40,687,633 - 40,695,144 (7,512)
query : 1 - 691 (691/691)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 10, extr 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175199)
HIX0203119
HIT000264112
(
BC070154
)
(Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;)
genome : 40,714,241 - 40,720,965 (6,725)
query : 1 - 1,226 (1,226/1,348)
6 exons
identity = 0.995
3'(0.994;1.000;1.000;1.000;0.970;1.000)5'
coverage = 1.000
InterPro :
IPR000079 : High mobility group nucleosome-binding domain-containing family
GO :
0000785 : Cellular Component : chromatin
0005634 : Cellular Component : nucleus
0031492 : Molecular Function : nucleosomal DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000338871
(
BC107741
)
(Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;)
genome : 40,714,235 - 40,721,049 (6,815)
query : 5 - 1,320 (1,316/1,353)
6 exons
identity = 0.995
3'(0.994;1.000;0.979;1.000;0.970;1.000)5'
coverage = 0.994
InterPro :
IPR000079 : High mobility group nucleosome-binding domain-containing family
GO :
0000785 : Cellular Component : chromatin
0005634 : Cellular Component : nucleus
0031492 : Molecular Function : nucleosomal DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000264911
(
BC072672
)
(Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;)
genome : 40,714,246 - 40,720,956 (6,711)
query : 1 - 1,212 (1,212/1,236)
6 exons
identity = 0.994
3'(0.993;1.000;1.000;1.000;0.970;1.000)5'
coverage = 1.000
InterPro :
IPR000079 : High mobility group nucleosome-binding domain-containing family
GO :
0000785 : Cellular Component : chromatin
0005634 : Cellular Component : nucleus
0031492 : Molecular Function : nucleosomal DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000029324
(
BC000075
)
(Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;)
genome : 40,714,241 - 40,720,967 (6,727)
query : 1 - 1,228 (1,228/1,246)
6 exons
identity = 0.996
3'(0.994;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000079 : High mobility group nucleosome-binding domain-containing family
GO :
0000785 : Cellular Component : chromatin
0005634 : Cellular Component : nucleus
0031492 : Molecular Function : nucleosomal DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000039709
(
BC023984
)
(Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;)
genome : 40,714,241 - 40,720,956 (6,716)
query : 4 - 1,220 (1,217/1,238)
6 exons
identity = 0.996
3'(0.994;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR000079 : High mobility group nucleosome-binding domain-containing family
GO :
0000785 : Cellular Component : chromatin
0005634 : Cellular Component : nucleus
0031492 : Molecular Function : nucleosomal DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000201685 (
NM_004965
)
(High mobility group nucleosome-binding domain-containing family protein.)
genome : 40,714,241 - 40,721,047 (6,807)
query : 1 - 1,304 (1,304/1,313)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000338441
(
BC106080
)
(Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;)
genome : 40,714,246 - 40,720,980 (6,735)
query : 1 - 1,233 (1,233/1,247)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000079 : High mobility group nucleosome-binding domain-containing family
GO :
0000785 : Cellular Component : chromatin
0005634 : Cellular Component : nucleus
0031492 : Molecular Function : nucleosomal DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000264470
(
BC071643
)
(Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;)
genome : 40,714,246 - 40,720,945 (6,700)
query : 11 - 1,211 (1,201/1,225)
6 exons
identity = 0.995
3'(0.994;1.000;1.000;1.000;0.970;1.000)5'
coverage = 0.992
InterPro :
IPR000079 : High mobility group nucleosome-binding domain-containing family
GO :
0000785 : Cellular Component : chromatin
0005634 : Cellular Component : nucleus
0031492 : Molecular Function : nucleosomal DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000595771 (
ENST00000492280
)
(Conserved hypothetical protein.)
genome : 40,714,241 - 40,721,270 (7,030)
query : 1 - 2,707 (2,707/2,707)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, cyto 11, cyto_nucl 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000362027 (
ENST00000380749
)
(High mobility group nucleosome-binding domain-containing family protein.)
genome : 40,714,241 - 40,721,126 (6,886)
query : 1 - 1,383 (1,383/1,383)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000529324 (
ENST00000431390
)
(Conserved hypothetical protein.)
genome : 40,714,241 - 40,721,066 (6,826)
query : 1 - 1,552 (1,552/1,552)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, cyto 11, cyto_nucl 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000590479 (
ENST00000486741
)
(Conserved hypothetical protein.)
genome : 40,714,241 - 40,721,025 (6,785)
query : 1 - 4,299 (4,299/4,299)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, extr 13, cyto_nucl 8, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000112982 (
ENST00000288344
)
(Conserved hypothetical protein.)
genome : 40,714,241 - 40,720,917 (6,677)
query : 1 - 1,303 (1,303/1,303)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, cyto 11, cyto_nucl 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000329180
(
AB209245
)
(Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;)
genome : 40,714,242 - 40,720,980 (6,739)
query : 1 - 4,260 (4,260/4,260)
5 exons
identity = 0.996
3'(0.994;0.997;1.000;1.000;0.993)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, extr 13, cyto_nucl 8, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000012647
(
AK056033
)
(Conserved hypothetical protein.)
genome : 40,714,242 - 40,718,454 (4,213)
query : 1 - 1,677 (1,677/1,677)
3 exons
identity = 0.993
3'(0.991;1.000;0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, cyto 11, cyto_nucl 7.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000314530 (
ENST00000361263
)
(Conserved hypothetical protein.)
genome : 40,714,242 - 40,718,454 (4,213)
query : 1 - 1,672 (1,672/1,672)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, cyto 11, cyto_nucl 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000050046
(
AK130775
)
(Conserved hypothetical protein.)
genome : 40,714,242 - 40,717,111 (2,870)
query : 1 - 884 (884/884)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, extr 13, cyto_nucl 8, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000191073
(
J02621
)
Representative transcript
(Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;)
genome : 40,714,252 - 40,720,987 (6,736)
query : 7 - 1,241 (1,235/1,249)
6 exons
identity = 0.994
3'(0.992;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.989
InterPro :
IPR000079 : High mobility group nucleosome-binding domain-containing family
GO :
0000785 : Cellular Component : chromatin
0005634 : Cellular Component : nucleus
0031492 : Molecular Function : nucleosomal DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000622220_03 (
ENST00000522935
)
(High mobility group nucleosome-binding domain-containing family protein.)
genome : 40,714,275 - 40,720,905 (6,631)
query : 1 - 1,129 (1,129/1,129)
6 exons
identity = 0.965
3'(0.969;0.969;1.000;0.967;1.000;0.870)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000534258 (
ENST00000436324
)
(Conserved hypothetical protein.)
genome : 40,714,572 - 40,721,014 (6,443)
query : 1 - 1,045 (1,045/1,045)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, extr 13, cyto_nucl 8, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000362026 (
ENST00000380748
)
(High mobility group nucleosome-binding domain-containing family protein.)
genome : 40,714,618 - 40,720,979 (6,362)
query : 1 - 829 (829/829)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000264111
(
BC070153
)
(Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;)
genome : 40,714,707 - 40,720,985 (6,279)
query : 1 - 776 (776/808)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.996
InterPro :
IPR000079 : High mobility group nucleosome-binding domain-containing family
GO :
0000785 : Cellular Component : chromatin
0005634 : Cellular Component : nucleus
0031492 : Molecular Function : nucleosomal DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000517312 (
ENST00000419378
)
(Conserved hypothetical protein.)
genome : 40,714,714 - 40,720,966 (6,253)
query : 1 - 850 (850/850)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, extr 13, cyto_nucl 8, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000592689 (
ENST00000489072
)
(Conserved hypothetical protein.)
genome : 40,714,726 - 40,720,788 (6,063)
query : 1 - 1,014 (1,014/1,014)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, cyto 11, cyto_nucl 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000586139 (
ENST00000482192
)
(Conserved hypothetical protein.)
genome : 40,714,730 - 40,720,549 (5,820)
query : 1 - 793 (793/793)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, extr 13, cyto_nucl 8, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000362025 (
ENST00000380747
)
(High mobility group nucleosome-binding domain-containing family protein.)
genome : 40,714,805 - 40,721,573 (6,769)
query : 1 - 709 (709/709)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000589348 (
ENST00000485550
)
(Conserved hypothetical protein.)
genome : 40,714,835 - 40,720,523 (5,689)
query : 1 - 745 (745/745)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7, mito 5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000593610 (
ENST00000490032
)
(Conserved hypothetical protein.)
genome : 40,714,904 - 40,720,265 (5,362)
query : 1 - 405 (405/405)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000540980 (
ENST00000443046
)
(Conserved hypothetical protein.)
genome : 40,714,935 - 40,720,980 (6,046)
query : 1 - 823 (823/823)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7.5, mito 6, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000434276
(
AK315410
)
(Conserved hypothetical protein.)
genome : 40,715,038 - 40,720,989 (5,952)
query : 1 - 450 (450/450)
6 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.970;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 2, cyto 2, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000100257
(
BT007337
)
(Non-histone chromosomal protein HMG-14; High mobility group nucleosome-binding domain-containing protein 1;)
genome : 40,715,039 - 40,720,505 (5,467)
query : 14 - 302 (289/303)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.954
InterPro :
IPR000079 : High mobility group nucleosome-binding domain-containing family
GO :
0000785 : Cellular Component : chromatin
0005634 : Cellular Component : nucleus
0031492 : Molecular Function : nucleosomal DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000511739_04 (
ENST00000413805
)
(High mobility group nucleosome-binding domain-containing family protein.)
genome : 40,715,038 - 40,720,505 (5,468)
query : 14 - 303 (290/303)
5 exons
identity = 0.962
3'(1.000;0.953;0.958;1.000;0.914)5'
coverage = 0.957
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000529050_01 (
ENST00000431116
)
(High mobility group nucleosome-binding domain-containing family protein.)
genome : 40,715,038 - 40,720,505 (5,468)
query : 14 - 303 (290/303)
5 exons
identity = 0.983
3'(1.000;0.969;1.000;0.967;1.000)5'
coverage = 0.957
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000551262_01 (
ENST00000453328
)
(Hypothetical protein.)
genome : 40,715,038 - 40,720,505 (5,468)
query : 14 - 303 (290/303)
5 exons
identity = 0.969
3'(1.000;0.961;0.979;1.000;0.914)5'
coverage = 0.957
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000713187_03 (
ENST00000601448
)
(High mobility group nucleosome-binding domain-containing family protein.)
genome : 40,715,038 - 40,720,505 (5,468)
query : 14 - 303 (290/303)
5 exons
identity = 0.962
3'(1.000;0.953;0.958;1.000;0.914)5'
coverage = 0.957
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000544557_04 (
ENST00000446623
)
(Hypothetical protein.)
genome : 40,715,043 - 40,720,505 (5,463)
query : 14 - 298 (285/298)
5 exons
identity = 0.968
3'(1.000;0.961;0.979;1.000;0.914)5'
coverage = 0.956
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000701125_05 (
ENST00000589286
)
(High mobility group nucleosome-binding domain-containing family protein.)
genome : 40,715,043 - 40,720,379 (5,337)
query : 17 - 268 (252/268)
4 exons
identity = 0.964
3'(1.000;0.953;0.979;0.938)5'
coverage = 0.940
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000568843 (
ENST00000464078
)
(High mobility group nucleosome-binding domain-containing family protein.)
genome : 40,715,063 - 40,720,980 (5,918)
query : 1 - 508 (508/508)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000594717 (
ENST00000491183
)
(High mobility group nucleosome-binding domain-containing family protein.)
genome : 40,719,073 - 40,720,993 (1,921)
query : 1 - 527 (527/527)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000583642 (
ENST00000479586
)
(High mobility group nucleosome-binding domain-containing family protein.)
genome : 40,719,262 - 40,720,941 (1,680)
query : 1 - 841 (841/841)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000575700 (
ENST00000471260
)
(Conserved hypothetical protein.)
genome : 40,719,418 - 40,720,546 (1,129)
query : 1 - 615 (615/615)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000586653 (
ENST00000482733
)
(Hypothetical short protein.)
genome : 40,719,921 - 40,720,946 (1,026)
query : 1 - 701 (701/701)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0203119
HIT000568419 (
ENST00000463631
)
(Hypothetical short protein.)
genome : 40,719,991 - 40,720,980 (990)
query : 1 - 583 (583/583)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203119)
HIX0175300
HIT000542823 (
ENST00000444889
)
(Conserved hypothetical protein.)
genome : 40,745,689 - 40,748,992 (3,304)
query : 1 - 1,784 (1,784/1,784)
5 exons
identity = 0.988
3'(0.998;0.958;0.987;0.966;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175300)
HIX0016117
HIT000128552 (
ENST00000333781
)
(WRB/Get1 family protein.)
genome : 40,752,170 - 40,769,815 (17,646)
query : 1 - 1,616 (1,616/1,616)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, extr 11, extr_plas 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000201369 (
NM_004627
)
(WRB/Get1 family protein.)
genome : 40,752,213 - 40,769,815 (17,603)
query : 1 - 1,573 (1,573/1,580)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, extr 11, extr_plas 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000493869
(
AK299245
)
(Tail-anchored protein insertion receptor WRB; Congenital heart disease 5 protein; Tryptophan-rich basic protein; WRB;)
genome : 40,752,252 - 40,764,446 (12,195)
query : 1 - 1,080 (1,080/1,080)
3 exons
identity = 0.996
5'(1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR028945 : WRB/Get1 family
GO :
0071816 : Biological Process : tail-anchored membrane protein insertion into ER membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000491810
(
AK297186
)
(WRB/Get1 family protein.)
genome : 40,752,255 - 40,763,761 (11,507)
query : 3 - 1,006 (1,004/1,006)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR028945 : WRB/Get1 family
GO :
0071816 : Biological Process : tail-anchored membrane protein insertion into ER membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29.5, extr_plas 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000425910
(
AK293113
)
(Tail-anchored protein insertion receptor WRB; Congenital heart disease 5 protein; Tryptophan-rich basic protein; WRB;)
genome : 40,752,258 - 40,769,383 (17,126)
query : 1 - 1,098 (1,098/1,098)
5 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;0.992)3'
coverage = 1.000
InterPro :
IPR028945 : WRB/Get1 family
GO :
0071816 : Biological Process : tail-anchored membrane protein insertion into ER membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, extr 11, extr_plas 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000325707
(
Y12478
)
(Tail-anchored protein insertion receptor WRB; Congenital heart disease 5 protein; Tryptophan-rich basic protein; WRB;)
genome : 40,752,270 - 40,769,616 (17,347)
query : 2 - 1,315 (1,314/1,358)
5 exons
identity = 0.992
5'(0.993;1.000;1.000;1.000;0.988)3'
coverage = 0.989
InterPro :
IPR028945 : WRB/Get1 family
GO :
0071816 : Biological Process : tail-anchored membrane protein insertion into ER membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, extr 9, E.R. 7, cyto_plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000488490
(
AK293866
)
(Tail-anchored protein insertion receptor WRB; Congenital heart disease 5 protein; Tryptophan-rich basic protein; WRB;)
genome : 40,752,280 - 40,786,214 (33,935)
query : 1 - 1,392 (1,392/1,392)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR028945 : WRB/Get1 family
GO :
0071816 : Biological Process : tail-anchored membrane protein insertion into ER membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, E.R. 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000640935 (
ENST00000541890
)
(WRB/Get1 family protein.)
genome : 40,752,280 - 40,786,214 (33,935)
query : 1 - 1,392 (1,392/1,392)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, E.R. 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000035805
(
BC012415
)
Representative transcript
(Tail-anchored protein insertion receptor WRB; Congenital heart disease 5 protein; Tryptophan-rich basic protein; WRB;)
genome : 40,752,280 - 40,769,628 (17,349)
query : 1 - 1,324 (1,324/1,341)
5 exons
identity = 0.994
5'(1.000;1.000;1.000;0.991;0.992)3'
coverage = 1.000
InterPro :
IPR028945 : WRB/Get1 family
GO :
0071816 : Biological Process : tail-anchored membrane protein insertion into ER membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, extr 11, extr_plas 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000591554 (
ENST00000487869
)
(WRB/Get1 family protein.)
genome : 40,752,320 - 40,763,972 (11,653)
query : 1 - 537 (537/537)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, extr_plas 8, cyto 6.5, cyto_nucl 4.5, mito 4,
pero 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000575896 (
ENST00000471468
)
(WRB/Get1 family protein.)
genome : 40,752,340 - 40,763,131 (10,792)
query : 1 - 581 (581/581)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, nucl 6.5, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000481904 (
ENST00000398753
)
(WRB/Get1 family protein.)
genome : 40,752,384 - 40,769,042 (16,659)
query : 1 - 699 (699/699)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, cyto 2, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000540707 (
ENST00000442773
)
(Conserved hypothetical protein.)
genome : 40,752,413 - 40,762,729 (10,317)
query : 1 - 541 (541/541)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 7.5, E.R._mito 7.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000361991 (
ENST00000380713
)
(WRB/Get1 family protein.)
genome : 40,758,019 - 40,765,206 (7,188)
query : 1 - 768 (768/768)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17.5, extr_plas 9.5, cyto 4.5, mito 4,
cyto_nucl 3.5, E.R. 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000361986 (
ENST00000380708
)
(WRB/Get1 family protein.)
genome : 40,759,691 - 40,769,815 (10,125)
query : 1 - 1,464 (1,464/1,464)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, cyto 2, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000429134
(
AK310268
)
(Tail-anchored protein insertion receptor WRB; Congenital heart disease 5 protein; Tryptophan-rich basic protein; WRB;)
genome : 40,759,691 - 40,769,145 (9,455)
query : 1 - 1,407 (1,407/1,407)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR028945 : WRB/Get1 family
GO :
0071816 : Biological Process : tail-anchored membrane protein insertion into ER membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, cyto 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000561645 (
NM_001146218
)
(WRB/Get1 family protein.)
genome : 40,759,692 - 40,769,815 (10,124)
query : 1 - 1,463 (1,463/1,470)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.995
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, cyto 2, E.R. 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000386597
(
BC111393
)
(Tail-anchored protein insertion receptor WRB; Congenital heart disease 5 protein; Tryptophan-rich basic protein; WRB;)
genome : 40,759,697 - 40,769,824 (10,128)
query : 5 - 1,475 (1,471/1,503)
5 exons
identity = 0.993
5'(1.000;1.000;1.000;1.000;0.989)3'
coverage = 0.997
InterPro :
IPR028945 : WRB/Get1 family
GO :
0071816 : Biological Process : tail-anchored membrane protein insertion into ER membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, cyto 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000571417 (
ENST00000466787
)
(WRB/Get1 family protein.)
genome : 40,759,717 - 40,769,180 (9,464)
query : 1 - 1,416 (1,416/1,416)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, cyto 2, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000493768
(
AK299144
)
(Tail-anchored protein insertion receptor WRB; Congenital heart disease 5 protein; Tryptophan-rich basic protein; WRB;)
genome : 40,759,739 - 40,769,365 (9,627)
query : 1 - 966 (966/966)
5 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR028945 : WRB/Get1 family
GO :
0071816 : Biological Process : tail-anchored membrane protein insertion into ER membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, cyto 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000594401 (
ENST00000490860
)
(WRB/Get1 family protein.)
genome : 40,764,822 - 40,769,030 (4,209)
query : 1 - 624 (624/624)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000513781 (
ENST00000415847
)
(Conserved hypothetical protein.)
genome : 40,765,149 - 40,778,372 (13,224)
query : 1 - 591 (591/591)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.6667, nucl 11, cyto 10, cyto_plas 7,
mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016118
HIT000057391
(
BX648744
)
(Lebercilin-like protein.)
genome : 40,777,786 - 40,800,360 (22,575)
query : 1 - 1,976 (1,976/2,058)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026188 : Lebercilin-like
IPR028933 : Lebercilin domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 14, extr 3, cyto 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000041226
(
BC031059
)
Representative transcript
(Lebercilin-like protein.)
genome : 40,777,771 - 40,816,128 (38,358)
query : 1 - 2,364 (2,364/2,391)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000)5'
coverage = 1.000
InterPro :
IPR026188 : Lebercilin-like
IPR028933 : Lebercilin domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169356
Mus
sp. (Mouse) : AK029554
Rattus
sp. (Rat) : BC082082
Bos
sp. (Cow) : BC151815
Canis
sp. (Dog) : ENSCAFT00000015987
Pan
sp. (Chimpanzee) : XM_001171277
Monodelphis
sp. (Opossum) : XM_001370973
Equus
sp. (Horse) : XM_001491973
Gallus
sp. (Chicken) : XM_416731
HIX0016118
HIT000097474
(
BC043006
)
(Lebercilin-like protein.)
genome : 40,777,785 - 40,817,659 (39,875)
query : 2 - 2,566 (2,565/2,582)
10 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993)5'
coverage = 0.999
InterPro :
IPR026188 : Lebercilin-like
IPR028933 : Lebercilin domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000112983 (
ENST00000288350
)
(Lebercilin-like protein.)
genome : 40,777,770 - 40,817,703 (39,934)
query : 1 - 2,416 (2,416/2,416)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000213772 (
NM_152505
)
(Lebercilin-like protein.)
genome : 40,777,770 - 40,816,128 (38,359)
query : 1 - 2,364 (2,364/2,364)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000361949 (
ENST00000380671
)
(Lebercilin-like protein.)
genome : 40,777,770 - 40,816,128 (38,359)
query : 1 - 2,364 (2,364/2,364)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000311999 (
ENST00000358268
)
(Lebercilin-like protein.)
genome : 40,777,786 - 40,817,659 (39,874)
query : 1 - 2,564 (2,564/2,564)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000598609 (
ENST00000495240
)
(Lebercilin-like protein.)
genome : 40,777,904 - 40,783,073 (5,170)
query : 1 - 972 (972/972)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, mito_nucl 11.3333, extr 7, nucl 7,
cyto_nucl 5.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000044892
(
AK125019
)
(Lebercilin-like protein.)
genome : 40,778,283 - 40,781,266 (2,984)
query : 1 - 2,984 (2,984/2,984)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR026188 : Lebercilin-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, extr 4, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016117
HIT000582387 (
ENST00000478273
)
(Conserved hypothetical protein.)
genome : 40,782,795 - 40,800,454 (17,660)
query : 1 - 366 (366/366)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016118
HIT000588707 (
ENST00000484878
)
(Lebercilin-like protein.)
genome : 40,783,644 - 40,817,678 (34,035)
query : 1 - 675 (675/675)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, nucl 9.5, mito 3, plas 2,
extr 2, extr_plas 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000043683
(
AK123810
)
(Lebercilin-like protein.)
genome : 40,793,485 - 40,795,429 (1,945)
query : 5 - 1,947 (1,943/1,947)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.998
InterPro :
IPR026188 : Lebercilin-like
IPR028933 : Lebercilin domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, cyto_plas 13.8333, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000056440
(
BX647793
)
(Lebercilin-like protein.)
genome : 40,793,998 - 40,810,862 (16,865)
query : 2 - 3,263 (3,262/3,280)
4 exons
identity = 0.996
3'(0.999;0.992;1.000;0.988)5'
coverage = 1.000
InterPro :
IPR026188 : Lebercilin-like
IPR028933 : Lebercilin domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13.5, pero 3, nucl 2.5,
mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000050901
(
BC026122
)
(Lebercilin-like protein.)
genome : 40,794,338 - 40,807,501 (13,164)
query : 23 - 1,671 (1,649/1,686)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 0.987
InterPro :
IPR026188 : Lebercilin-like
IPR028933 : Lebercilin domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 15, nucl 7, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000595145 (
ENST00000491625
)
(Lebercilin-like protein.)
genome : 40,794,338 - 40,817,731 (23,394)
query : 1 - 1,308 (1,308/1,308)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, cyto_plas 13.8333, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000589678 (
ENST00000485895
)
(Lebercilin-like protein.)
genome : 40,794,338 - 40,817,703 (23,366)
query : 1 - 1,699 (1,699/1,699)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 15, nucl 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000564886 (
ENST00000459939
)
(Lebercilin-like protein.)
genome : 40,794,914 - 40,817,687 (22,774)
query : 1 - 775 (775/775)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.8333, cyto_plas 12.3333,
nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000593753 (
ENST00000490184
)
(Lebercilin-like protein.)
genome : 40,795,166 - 40,817,701 (22,536)
query : 1 - 853 (853/853)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 12.5, cyto_nucl 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000515952 (
ENST00000418018
)
(Lebercilin-like protein.)
genome : 40,795,171 - 40,817,686 (22,516)
query : 1 - 885 (885/885)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12.5, extr 10, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000571579 (
ENST00000466954
)
(Conserved hypothetical protein.)
genome : 40,795,346 - 40,817,659 (22,314)
query : 1 - 809 (809/809)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016117
HIT000581085 (
ENST00000476914
)
(Conserved hypothetical protein.)
genome : 40,797,797 - 40,800,454 (2,658)
query : 1 - 461 (461/461)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016117
HIT000584690 (
ENST00000480690
)
(Conserved hypothetical protein.)
genome : 40,797,845 - 40,800,454 (2,610)
query : 1 - 321 (321/321)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 13.5, cyto_nucl 10.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016117)
HIX0016118
HIT000546222 (
ENST00000448288
)
(Lebercilin-like protein.)
genome : 40,800,097 - 40,817,704 (17,608)
query : 1 - 805 (805/805)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 7.5, nucl 6.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000532215 (
ENST00000434281
)
(Lebercilin-like protein.)
genome : 40,800,134 - 40,817,729 (17,596)
query : 1 - 523 (523/523)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7, cyto_nucl 6.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000536338 (
ENST00000438404
)
(Lebercilin-like protein.)
genome : 40,800,136 - 40,817,645 (17,510)
query : 1 - 849 (849/849)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto_nucl 7, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000509500 (
ENST00000411566
)
(Lebercilin-like protein.)
genome : 40,800,141 - 40,817,659 (17,519)
query : 1 - 808 (808/808)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto_nucl 7, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000572593 (
ENST00000468009
)
(Lebercilin-like protein.)
genome : 40,800,148 - 40,810,862 (10,715)
query : 1 - 616 (616/616)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 6, cyto 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000513797 (
ENST00000415863
)
(Lebercilin-like protein.)
genome : 40,800,211 - 40,817,695 (17,485)
query : 1 - 706 (706/706)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 9.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000524717 (
ENST00000426783
)
(Lebercilin-like protein.)
genome : 40,800,231 - 40,817,695 (17,465)
query : 1 - 690 (690/690)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 7.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000553951 (
ENST00000456017
)
(Lebercilin-like protein.)
genome : 40,800,328 - 40,817,706 (17,379)
query : 1 - 612 (612/612)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000549065 (
ENST00000451131
)
(Hypothetical short protein.)
genome : 40,800,388 - 40,817,678 (17,291)
query : 1 - 657 (657/657)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 5, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016118
HIT000584616 (
ENST00000480612
)
(Conserved hypothetical protein.)
genome : 40,815,385 - 40,817,679 (2,295)
query : 1 - 772 (772/772)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 8, cyto 2, cyto_nucl 1.83333,
cyto_pero 1.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016118)
HIX0016119
HIT000361915 (
ENST00000380637
)
(SH3 domain-binding glutamic acid-rich protein isoform b.)
genome : 40,817,781 - 40,887,433 (69,653)
query : 1 - 1,014 (1,014/1,014)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 14.5, nucl 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016119)
HIX0016119
HIT000361912 (
ENST00000380634
)
(SH3 domain-binding glutamic acid-rich protein isoform b.)
genome : 40,817,791 - 40,887,282 (69,492)
query : 1 - 816 (816/816)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 14.5, nucl 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016119)
HIX0016119
HIT000315499 (
NM_001001713
)
(SH3 domain-binding glutamic acid-rich protein isoform b.)
genome : 40,817,797 - 40,887,433 (69,637)
query : 1 - 998 (998/1,017)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 14.5, nucl 10.5, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016119)
HIX0016119
HIT000556229 (
ENST00000458295
)
(SH3 domain-binding glutamic acid-rich protein isoform b.)
genome : 40,817,801 - 40,887,197 (69,397)
query : 1 - 812 (812/812)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 13.5, extr 10, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016119)
HIX0016119
HIT000538222 (
ENST00000440288
)
(SH3 domain-binding glutamic acid-rich protein isoform b.)
genome : 40,817,857 - 40,883,633 (65,777)
query : 1 - 585 (585/585)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.5, nucl 10, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016119)
HIX0016119
HIT000361909 (
ENST00000380631
)
(SH3 domain-binding glutamic acid-rich protein isoform b.)
genome : 40,817,868 - 40,887,134 (69,267)
query : 1 - 780 (780/780)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 14.5, nucl 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016119)
HIX0016119
HIT000128464 (
ENST00000333634
)
(SH3 domain-binding glutamic acid-rich protein; SH3BGR protein; 21-glutamic acid-rich protein; 21-GARP;)
genome : 40,823,756 - 40,887,433 (63,678)
query : 1 - 1,251 (1,251/1,251)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016119)
HIX0016119
HIT000203837 (
NM_007341
)
(SH3 domain-binding glutamic acid-rich protein; SH3BGR protein; 21-glutamic acid-rich protein; 21-GARP;)
genome : 40,823,780 - 40,887,433 (63,654)
query : 1 - 1,227 (1,227/1,246)
7 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016119)
HIX0016119
HIT000324635
(
X93498
)
Representative transcript
(SH3 domain-binding glutamic acid-rich protein; SH3BGR protein; 21-glutamic acid-rich protein; 21-GARP;)
genome : 40,823,820 - 40,887,433 (63,614)
query : 4 - 1,161 (1,158/1,180)
7 exons
identity = 0.971
5'(0.996;1.000;1.000;1.000;1.000;1.000;0.922)3'
coverage = 0.997
InterPro :
IPR006993 : SH3-binding, glutamic acid-rich protein
IPR012336 : Thioredoxin-like fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016119)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AJ272170
Bos
sp. (Cow) : BC114779
Gallus
sp. (Chicken) : BX934008
Tetraodon
sp. (Tetraodon) : CR734108
Equus
sp. (Horse) : ENSECAT00000011051
Oryzias
sp. (Medaka) : ENSORLT00000016197
Macaca
sp. (Macaque) : XM_001118709
Monodelphis
sp. (Opossum) : XM_001370782
Pan
sp. (Chimpanzee) : XM_514900
Canis
sp. (Dog) : XM_544890
Rattus
sp. (Rat) : XM_573265
Danio
sp. (Zebrafish) : XM_688127
HIX0016119
HIT000032790
(
BC006371
)
(SH3 domain-binding glutamic acid-rich protein; SH3BGR protein; 21-glutamic acid-rich protein; 21-GARP;)
genome : 40,823,829 - 40,887,427 (63,599)
query : 1 - 1,171 (1,171/1,196)
7 exons
identity = 0.997
5'(0.992;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR006993 : SH3-binding, glutamic acid-rich protein
IPR012336 : Thioredoxin-like fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016119)
HIX0016119
HIT000099914
(
BT006994
)
(SH3 domain-binding glutamic acid-rich protein; SH3BGR protein; 21-glutamic acid-rich protein; 21-GARP;)
genome : 40,823,834 - 40,883,702 (59,869)
query : 1 - 720 (720/720)
6 exons
identity = 0.997
5'(0.991;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006993 : SH3-binding, glutamic acid-rich protein
IPR012336 : Thioredoxin-like fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016119)
HIX0016119
HIT000550484 (
ENST00000452550
)
(SH3 domain-binding glutamic acid-rich protein isoform b.)
genome : 40,834,300 - 40,887,433 (53,134)
query : 19 - 865 (847/865)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.979
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 13.5, extr 10, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016119)
HIX0016119
HIT000521530 (
ENST00000423596
)
(SH3 domain-binding glutamic acid-rich protein isoform b.)
genome : 40,834,460 - 40,883,702 (49,243)
query : 1 - 246 (246/246)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016119)
HIX0175329
HIT000548013 (
ENST00000450079
)
(EF-hand domain pair containing protein.)
genome : 40,860,253 - 40,860,686 (434)
query : 1 - 434 (434/434)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 12.1667, extr 6, cyto_nucl 5,
cyto 4, cyto_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175329)
HIX0175242
HIT000529677 (
ENST00000431743
)
(Conserved hypothetical protein.)
genome : 40,863,470 - 40,863,824 (355)
query : 1 - 355 (355/355)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175242)
HIX0016119
HIT000545873 (
ENST00000447939
)
(SH3 domain-binding glutamic acid-rich protein isoform b.)
genome : 40,871,749 - 40,887,433 (15,685)
query : 1 - 512 (512/512)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, mito 11, cyto_nucl 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016119)
HIX0175152
HIT000509801 (
ENST00000411867
)
(Junctional protein associated with coronary artery disease family protein.)
genome : 40,897,510 - 40,901,782 (4,273)
query : 1 - 3,980 (3,980/3,980)
2 exons
identity = 0.999
5'(0.992;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 8.16667, cyto 7, extr_plas 7,
cyto_pero 5.33333, mito_nucl 5.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175152)
HIX0040840
HIT000361898 (
ENST00000380620
)
(Beta-1,3-galactosyltransferase 5; Beta-1,3-GalTase 5; Beta3Gal-T5; Beta3GalT5; b3Gal-T5; EC=2.4.1.-; Beta-3-Gx-T5; UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5; UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5;)
genome : 40,928,369 - 41,034,816 (106,448)
query : 1 - 2,922 (2,922/2,922)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000253313
(
AY372061
)
Representative transcript
(Beta-1,3-galactosyltransferase 5; Beta-1,3-GalTase 5; Beta3Gal-T5; Beta3GalT5; b3Gal-T5; EC=2.4.1.-; Beta-3-Gx-T5; UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5; UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5;)
genome : 40,928,369 - 41,034,815 (106,447)
query : 1 - 2,921 (2,921/2,921)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.-
InterPro :
IPR002659 : Glycosyl transferase, family 31
GO :
0006486 : Biological Process : protein glycosylation
0008378 : Molecular Function : galactosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC047347
Macaca
sp. (Macaque) : ENSMMUT00000004850
Monodelphis
sp. (Opossum) : ENSMODT00000026692
Rattus
sp. (Rat) : XM_001053357
Pan
sp. (Chimpanzee) : XM_001171405
Equus
sp. (Horse) : XM_001493811
Gallus
sp. (Chicken) : XM_425555
Canis
sp. (Dog) : XM_544891
Bos
sp. (Cow) : XM_866515
HIX0040840
HIT000580061 (
ENST00000475838
)
(Hypothetical short protein.)
genome : 40,928,411 - 40,935,511 (7,101)
query : 1 - 658 (658/658)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, extr 12, cyto_mito 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0027787
HIT000562793 (
NR_026542
)
(Putative uncharacterized protein C21orf88;)
genome : 40,969,076 - 40,984,749 (15,674)
query : 1 - 1,450 (1,450/1,469)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 9.5, cyto_nucl 9.5, cyto_mito 7.5,
cyto_pero 6.66667, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027787)
HIX0027787
HIT000593412 (
ENST00000489821
)
(Putative uncharacterized protein C21orf88;)
genome : 40,969,074 - 40,971,583 (2,510)
query : 1 - 1,159 (1,159/1,159)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, cyto 7.5, cyto_nucl 5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027787)
HIX0027787
HIT000048861
(
AK129590
)
(Conserved hypothetical protein.)
genome : 40,969,077 - 40,971,583 (2,507)
query : 1 - 1,156 (1,156/1,156)
2 exons
identity = 0.994
3'(0.995;0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027787)
HIX0027787
HIT000079479
(
AF426267
)
(Putative uncharacterized protein C21orf88;)
genome : 40,977,535 - 40,984,368 (6,834)
query : 1 - 623 (623/641)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 9, nucl 6.5, extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027787)
HIX0027787
HIT000562794 (
NR_026543
)
(Putative uncharacterized protein C21orf88;)
genome : 40,977,535 - 40,984,749 (7,215)
query : 1 - 1,349 (1,349/1,365)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10.5, cyto_nucl 8.33333, cyto 5,
cyto_pero 3.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027787)
HIX0027787
HIT000265801
(
BC080530
)
Representative transcript
(Putative uncharacterized protein C21orf88;)
genome : 40,977,535 - 40,984,748 (7,214)
query : 1 - 1,348 (1,348/1,364)
3 exons
identity = 0.997
3'(0.997;1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10.5, cyto_nucl 8.33333, cyto 5,
cyto_pero 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027787)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000022320
Pan
sp. (Chimpanzee) : XM_001171476
HIX0027787
HIT000126210 (
ENST00000329618
)
(Putative uncharacterized protein C21orf88;)
genome : 40,977,535 - 40,984,748 (7,214)
query : 1 - 1,348 (1,348/1,357)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10.5, cyto_nucl 8.33333, cyto 5,
cyto_pero 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027787)
HIX0027787
HIT000361882 (
ENST00000380604
)
(Putative uncharacterized protein C21orf88;)
genome : 40,977,535 - 40,984,368 (6,834)
query : 1 - 623 (623/632)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 9, nucl 6.5, extr_plas 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027787)
HIX0027787
HIT000260298
(
BC062296
)
(Putative uncharacterized protein C21orf88;)
genome : 40,977,723 - 40,984,751 (7,029)
query : 1 - 1,163 (1,163/1,180)
3 exons
identity = 0.999
3'(1.000;1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10.5, cyto_nucl 8.33333, cyto 5,
cyto_pero 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027787)
HIX0040840
HIT000425748
(
AK292951
)
(Beta-1,3-galactosyltransferase 5; Beta-1,3-GalTase 5; Beta3Gal-T5; Beta3GalT5; b3Gal-T5; EC=2.4.1.-; Beta-3-Gx-T5; UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5; UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5;)
genome : 40,984,867 - 41,033,488 (48,622)
query : 1 - 1,290 (1,290/1,290)
3 exons
identity = 0.998
5'(1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.4.1.-
InterPro :
IPR002659 : Glycosyl transferase, family 31
GO :
0006486 : Biological Process : protein glycosylation
0008378 : Molecular Function : galactosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000392993
(
DQ645732
)
(Hypothetical short protein.)
genome : 40,984,972 - 41,031,839 (46,868)
query : 1 - 414 (414/414)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000392994
(
DQ645733
)
(Non-protein coding transcript.)
genome : 40,984,972 - 41,031,839 (46,868)
query : 1 - 183 (183/183)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000392995
(
DQ645734
)
(Hypothetical short protein.)
genome : 40,984,972 - 41,031,839 (46,868)
query : 1 - 522 (522/522)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9, cyto_nucl 6.5, nucl 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000514489 (
ENST00000416555
)
(Hypothetical short protein.)
genome : 41,002,198 - 41,098,012 (95,815)
query : 1 - 544 (544/544)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000392996
(
DQ645735
)
(Hypothetical protein.)
genome : 41,002,218 - 41,031,839 (29,622)
query : 1 - 591 (591/591)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 4, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000392997
(
DQ645736
)
(Hypothetical short protein.)
genome : 41,002,218 - 41,031,839 (29,622)
query : 1 - 360 (360/360)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000392998
(
DQ645737
)
(Hypothetical short protein.)
genome : 41,014,312 - 41,031,839 (17,528)
query : 1 - 483 (483/483)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000392999
(
DQ645738
)
(Non-protein coding transcript.)
genome : 41,014,312 - 41,031,839 (17,528)
query : 1 - 252 (252/252)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000361896 (
ENST00000380618
)
(Beta-1,3-galactosyltransferase 5; Beta-1,3-GalTase 5; Beta3Gal-T5; Beta3GalT5; b3Gal-T5; EC=2.4.1.-; Beta-3-Gx-T5; UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5; UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5;)
genome : 41,029,254 - 41,034,816 (5,563)
query : 1 - 2,763 (2,763/2,763)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000058629
(
AB020337
)
(Beta-1,3-galactosyltransferase 5; Beta-1,3-GalTase 5; Beta3Gal-T5; Beta3GalT5; b3Gal-T5; EC=2.4.1.-; Beta-3-Gx-T5; UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5; UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5;)
genome : 41,029,254 - 41,034,815 (5,562)
query : 1 - 2,762 (2,762/2,762)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.-
InterPro :
IPR002659 : Glycosyl transferase, family 31
GO :
0006486 : Biological Process : protein glycosylation
0008378 : Molecular Function : galactosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000202685 (
NM_006057
)
(Beta-1,3-galactosyltransferase 5; Beta-1,3-GalTase 5; Beta3Gal-T5; Beta3GalT5; b3Gal-T5; EC=2.4.1.-; Beta-3-Gx-T5; UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5; UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5;)
genome : 41,029,254 - 41,034,815 (5,562)
query : 1 - 2,762 (2,762/2,762)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000211184 (
NM_033170
)
(Beta-1,3-galactosyltransferase 5; Beta-1,3-GalTase 5; Beta3Gal-T5; Beta3GalT5; b3Gal-T5; EC=2.4.1.-; Beta-3-Gx-T5; UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5; UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5;)
genome : 41,029,254 - 41,034,815 (5,562)
query : 1 - 2,629 (2,629/2,629)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000211185 (
NM_033171
)
(Beta-1,3-galactosyltransferase 5; Beta-1,3-GalTase 5; Beta3Gal-T5; Beta3GalT5; b3Gal-T5; EC=2.4.1.-; Beta-3-Gx-T5; UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5; UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5;)
genome : 41,029,254 - 41,034,815 (5,562)
query : 1 - 2,871 (2,871/2,871)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000211186 (
NM_033172
)
(Beta-1,3-galactosyltransferase 5; Beta-1,3-GalTase 5; Beta3Gal-T5; Beta3GalT5; b3Gal-T5; EC=2.4.1.-; Beta-3-Gx-T5; UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5; UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5;)
genome : 41,029,254 - 41,034,815 (5,562)
query : 1 - 2,711 (2,711/2,711)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000135748 (
ENST00000343118
)
(Beta-1,3-galactosyltransferase 5; Beta-1,3-GalTase 5; Beta3Gal-T5; Beta3GalT5; b3Gal-T5; EC=2.4.1.-; Beta-3-Gx-T5; UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5; UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5;)
genome : 41,029,704 - 41,034,815 (5,112)
query : 1 - 2,606 (2,606/2,606)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000481872 (
ENST00000398714
)
(Beta-1,3-galactosyltransferase 5; Beta-1,3-GalTase 5; Beta3Gal-T5; Beta3GalT5; b3Gal-T5; EC=2.4.1.-; Beta-3-Gx-T5; UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5; UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5;)
genome : 41,029,704 - 41,034,815 (5,112)
query : 1 - 2,446 (2,446/2,446)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000337952
(
BC104864
)
(Beta-1,3-galactosyltransferase 5; Beta-1,3-GalTase 5; Beta3Gal-T5; Beta3GalT5; b3Gal-T5; EC=2.4.1.-; Beta-3-Gx-T5; UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5; UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5;)
genome : 41,032,396 - 41,033,504 (1,109)
query : 1 - 1,109 (1,109/1,109)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
EC number :
EC 2.4.1.-
InterPro :
IPR002659 : Glycosyl transferase, family 31
GO :
0006486 : Biological Process : protein glycosylation
0008378 : Molecular Function : galactosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0040840
HIT000337950
(
BC104862
)
(Beta-1,3-galactosyltransferase 5; Beta-1,3-GalTase 5; Beta3Gal-T5; Beta3GalT5; b3Gal-T5; EC=2.4.1.-; Beta-3-Gx-T5; UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 5; UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 5;)
genome : 41,032,396 - 41,033,501 (1,106)
query : 1 - 1,106 (1,106/1,106)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
EC number :
EC 2.4.1.-
InterPro :
IPR002659 : Glycosyl transferase, family 31
GO :
0006486 : Biological Process : protein glycosylation
0008378 : Molecular Function : galactosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040840)
HIX0041045
HIT000555259 (
ENST00000457325
)
(Hypothetical protein.)
genome : 41,099,682 - 41,102,607 (2,926)
query : 1 - 1,542 (1,542/1,542)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 5, cyto 3.5, mito_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041045)
HIX0041045
HIT000517760 (
ENST00000419826
)
(Hypothetical short protein.)
genome : 41,099,773 - 41,101,611 (1,839)
query : 1 - 699 (699/699)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041045)
HIX0016120
HIT000361866 (
ENST00000380588
)
(Immunoglobulin superfamily member 5; IgSF5; Junctional adhesion molecule 4; JAM-4;)
genome : 41,117,334 - 41,174,023 (56,690)
query : 1 - 2,066 (2,066/2,066)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 17, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016120)
HIX0016120
HIT000398033 (
NM_001080444
)
(Immunoglobulin superfamily member 5; IgSF5; Junctional adhesion molecule 4; JAM-4;)
genome : 41,117,334 - 41,174,023 (56,690)
query : 1 - 2,066 (2,066/2,066)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 17, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016120)
HIX0016120
HIT000017383
(
AK092516
)
Representative transcript
(Conserved hypothetical protein.)
genome : 41,117,334 - 41,174,008 (56,675)
query : 1 - 2,051 (2,051/2,051)
9 exons
identity = 0.998
5'(0.992;1.000;0.994;1.000;1.000;1.000;1.000;
0.988;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 9.5, mito 9, nucl 4.5,
E.R._mito 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016120)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK164699
Rattus
sp. (Rat) : BC086342
Gallus
sp. (Chicken) : BX933172
Equus
sp. (Horse) : ENSECAT00000012469
Pongo
sp. (Orangutan) : ENSPPYT00000013271
Pan
sp. (Chimpanzee) : ENSPTRT00000025962
Macaca
sp. (Macaque) : XM_001118691
Canis
sp. (Dog) : XM_848257
Bos
sp. (Cow) : XM_864974
HIX0016120
HIT000583446 (
ENST00000479378
)
(Immunoglobulin superfamily member 5; IgSF5; Junctional adhesion molecule 4; JAM-4;)
genome : 41,123,099 - 41,151,254 (28,156)
query : 1 - 1,059 (1,059/1,062)
4 exons
identity = 0.992
5'(1.000;1.000;1.000;0.966)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016120)
HIX0016120
HIT000564869 (
ENST00000459922
)
(Hypothetical protein.)
genome : 41,163,557 - 41,173,362 (9,806)
query : 1 - 724 (724/724)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, mito 8, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016120)
HIX0016121
HIT000125655 (
ENST00000328619
)
(Purkinje cell protein 4; Brain-specific antigen PCP-4; Brain-specific polypeptide PEP-19;)
genome : 41,239,243 - 41,301,322 (62,080)
query : 1 - 660 (660/660)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016121)
HIX0016121
HIT000202808 (
NM_006198
)
(Purkinje cell protein 4; Brain-specific antigen PCP-4; Brain-specific polypeptide PEP-19;)
genome : 41,239,347 - 41,301,321 (61,975)
query : 1 - 555 (555/566)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016121)
HIX0016121
HIT000220289
(
U52969
)
Representative transcript
(Purkinje cell protein 4; Brain-specific antigen PCP-4; Brain-specific polypeptide PEP-19;)
genome : 41,239,347 - 41,301,317 (61,971)
query : 1 - 551 (551/554)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016121)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AJ493658
Mus
sp. (Mouse) : AK164699
Bos
sp. (Cow) : BC118489
Danio
sp. (Zebrafish) : BC122447
Tetraodon
sp. (Tetraodon) : CR665548
Equus
sp. (Horse) : ENSECAT00000012965
Oryzias
sp. (Medaka) : ENSORLT00000016157
Pongo
sp. (Orangutan) : ENSPPYT00000013272
Gallus
sp. (Chicken) : XM_001234512
Monodelphis
sp. (Opossum) : XM_001370638
Pan
sp. (Chimpanzee) : XM_531603
Canis
sp. (Dog) : XM_848266
HIX0016121
HIT000422761
(
AK289964
)
(Purkinje cell protein 4; Brain-specific antigen PCP-4; Brain-specific polypeptide PEP-19;)
genome : 41,239,364 - 41,301,320 (61,957)
query : 1 - 537 (537/537)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016121)
HIX0016121
HIT000567070 (
ENST00000462224
)
(Purkinje cell protein 4; Brain-specific antigen PCP-4; Brain-specific polypeptide PEP-19;)
genome : 41,239,365 - 41,301,322 (61,958)
query : 1 - 683 (683/683)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016121)
HIX0016121
HIT000324634
(
X93349
)
(Purkinje cell protein 4; Brain-specific antigen PCP-4; Brain-specific polypeptide PEP-19;)
genome : 41,239,378 - 41,301,313 (61,936)
query : 9 - 524 (516/540)
3 exons
identity = 0.990
5'(0.949;0.981;0.998)3'
coverage = 0.983
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016121)
HIX0016121
HIT000036368
(
BC013791
)
(Purkinje cell protein 4; Brain-specific antigen PCP-4; Brain-specific polypeptide PEP-19;)
genome : 41,239,371 - 41,301,312 (61,942)
query : 1 - 522 (522/536)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016121)
HIX0016121
HIT000573270 (
ENST00000468717
)
(Purkinje cell protein 4.)
genome : 41,239,377 - 41,301,322 (61,946)
query : 1 - 706 (706/706)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 10, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016121)
HIX0016121
HIT000079307
(
AF416716
)
(Purkinje cell protein 4; Brain-specific antigen PCP-4; Brain-specific polypeptide PEP-19;)
genome : 41,239,399 - 41,301,161 (61,763)
query : 1 - 343 (343/343)
3 exons
identity = 0.997
5'(1.000;1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016121)
HIX0016121
HIT000331551
(
AM183336
)
(Purkinje cell protein 4; Brain-specific antigen PCP-4; Brain-specific polypeptide PEP-19;)
genome : 41,239,409 - 41,301,317 (61,909)
query : 1 - 489 (489/491)
3 exons
identity = 0.998
5'(1.000;1.000;0.998)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016121)
HIX0213200
HIT000439151_11
(
DQ572620
)
Representative transcript
(Non-protein coding transcript.)
genome : 41,263,809 - 41,263,838 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213200)
HIX0016121
HIT000267228
(
CR450319
)
(Purkinje cell protein 4; Brain-specific antigen PCP-4; Brain-specific polypeptide PEP-19;)
genome : 41,270,399 - 41,301,033 (30,635)
query : 8 - 186 (179/186)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.962
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016121)
HIX0016121
HIT000572169 (
ENST00000467565
)
(Conserved hypothetical protein.)
genome : 41,270,401 - 41,301,322 (30,922)
query : 1 - 587 (587/587)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, nucl 4.5, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016121)
HIX0040859
HIT000483427 (
ENST00000400454
)
(Down syndrome cell adhesion molecule; CHD2; Precursor;)
genome : 41,382,926 - 42,219,065 (836,140)
query : 1 - 8,552 (8,552/8,552)
33 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, cyto 8, extr_plas 7.5, pero 5, extr 4.5,
cyto_golg 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040859)
HIX0040859
HIT000329071
(
AB209136
)
(Down syndrome cell adhesion molecule; CHD2; Precursor;)
genome : 41,384,341 - 42,218,622 (834,282)
query : 1 - 6,694 (6,694/6,694)
33 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, cyto 8, extr_plas 7.5, pero 5, extr 4.5,
cyto_golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040859)
HIX0040859
HIT000198372 (
NM_001389
)
(Down syndrome cell adhesion molecule; CHD2; Precursor;)
genome : 41,384,343 - 42,219,039 (834,697)
query : 1 - 7,109 (7,109/7,110)
33 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, cyto 8, extr_plas 7.5, pero 5, extr 4.5,
cyto_golg 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040859)
HIX0040859
HIT000724956 (
NM_001271534
)
(Down syndrome cell adhesion molecule; CHD2; Precursor;)
genome : 41,384,343 - 42,219,039 (834,697)
query : 1 - 7,055 (7,055/7,055)
33 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 13, plas 9, extr_plas 7, cyto 4, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040859)
HIX0040859
HIT000727529 (
NR_073202
)
(Down syndrome cell adhesion molecule; CHD2; Precursor;)
genome : 41,384,343 - 42,219,039 (834,697)
query : 1 - 6,918 (6,918/6,918)
32 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.945;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 7.5, extr_plas 7.5, cyto_nucl 6.5,
cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040859)
HIX0040859
HIT000076375
(
AF289030
)
(Down syndrome cell adhesion molecule; CHD2; Precursor;)
genome : 41,384,846 - 41,725,581 (340,736)
query : 1 - 5,356 (5,356/5,374)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, cyto_mito 7.16667, nucl 7, plas 6,
extr_plas 5, mito_pero 2.83333, mito 2.5, extr 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040859)
HIX0040859
HIT000504690 (
ENST00000404019
)
(Down syndrome cell adhesion molecule; CHD2; Precursor;)
genome : 41,384,828 - 41,725,581 (340,754)
query : 1 - 5,374 (5,374/5,374)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, cyto_mito 7.16667, nucl 7, plas 6,
extr_plas 5, mito_pero 2.83333, mito 2.5, extr 2, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040859)
HIX0040859
HIT000074177
(
AF217525
)
Representative transcript
(Down syndrome cell adhesion molecule; CHD2; Precursor;)
genome : 41,384,846 - 42,219,065 (834,220)
query : 1 - 6,632 (6,632/6,649)
33 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, cyto 8, extr_plas 7.5, pero 5, extr 4.5,
cyto_golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040859)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY005483
Danio
sp. (Zebrafish) : AY552547
Macaca
sp. (Macaque) : ENSMMUT00000007287
Oryzias
sp. (Medaka) : ENSORLT00000000832
Oryzias
sp. (Medaka) : ENSORLT00000016154
Pongo
sp. (Orangutan) : ENSPPYT00000013273
Rattus
sp. (Rat) : ENSRNOT00000002215
Tetraodon
sp. (Tetraodon) : GSTENT00008738001
Tetraodon
sp. (Tetraodon) : GSTENT00012958001
Takifugu
sp. (Fugu) : SINFRUT00000140360
Pan
sp. (Chimpanzee) : XM_001171538
Monodelphis
sp. (Opossum) : XM_001370616
Equus
sp. (Horse) : XM_001491625
Gallus
sp. (Chicken) : XM_416734
Canis
sp. (Dog) : XM_544893
Bos
sp. (Cow) : XM_592662
Danio
sp. (Zebrafish) : XM_688647
HIX0040859
HIT000066979
(
AF086100
)
(Down syndrome cell adhesion molecule; CHD2; Precursor;)
genome : 41,384,846 - 41,414,541 (29,696)
query : 1 - 712 (712/721)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 14.5, cyto 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040859)
HIX0040859
HIT000062708
(
AF023450
)
(Down syndrome cell adhesion molecule; CHD2; Precursor;)
genome : 41,384,847 - 42,219,039 (834,193)
query : 1 - 6,413 (6,413/6,413)
32 exons
identity = 0.997
3'(1.000;0.997;1.000;1.000;1.000;1.000;0.945;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 7.5, extr_plas 7.5, cyto_nucl 6.5,
cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040859)
HIX0040859
HIT000062707
(
AF023449
)
(Down syndrome cell adhesion molecule; CHD2; Precursor;)
genome : 41,384,847 - 42,080,698 (695,852)
query : 1 - 6,110 (6,110/6,110)
32 exons
identity = 1.000
3'(1.000;0.997;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 8.5, cyto 7, E.R. 7, extr_plas 5, nucl 4, pero 4,
E.R._golg 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040859)
HIX0097102
HIT000389554
(
BC127937
)
Representative transcript
(Conserved hypothetical protein.)
genome : 41,388,167 - 41,388,921 (755)
query : 11 - 765 (755/773)
1 exon
identity = 0.977
5'(0.977)3'
coverage = 0.977
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14.5, nucl 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0097102)
HIX0097101
HIT000388459
(
BC122566
)
Representative transcript
(Non-protein coding transcript.)
genome : 41,526,990 - 41,527,439 (450)
query : 11 - 460 (450/464)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.970
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0097101)
HIX0197155
pHIT000121898 ( pHIT000121898 )
Representative transcript
(Hypothetical protein.)
genome : 41,581,035 - 41,611,111 (30,077)
query : 1 - 414 (414/414)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197155)
CAGE tag :
T21R026B1697
HIX0227056
HIT000696900 (
ENST00000585040
)
(Non-protein coding transcript.)
genome : 41,584,279 - 41,584,358 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227056)
HIX0227056
HIT000725980 (
NR_039917
)
(Non-protein coding transcript.)
genome : 41,584,279 - 41,584,358 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227056)
HIX0027821
HIT000048630
(
AK128757
)
Representative transcript
(Conserved hypothetical protein.)
genome : 41,649,579 - 41,652,512 (2,934)
query : 1 - 2,935 (2,935/2,935)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 11, cyto_nucl 10.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027821)
HIX0040872
HIT000079079
(
AF401029
)
(Conserved hypothetical protein.)
genome : 41,755,010 - 41,757,285 (2,276)
query : 1 - 1,282 (1,282/1,282)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 13.6667, extr 3,
cyto_pero 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040872)
HIX0040872
HIT000079080
(
AF401030
)
(Conserved hypothetical protein.)
genome : 41,755,010 - 41,757,285 (2,276)
query : 1 - 1,153 (1,153/1,153)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 7, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040872)
HIX0040872
HIT000079083
(
AF401033
)
Representative transcript
(Conserved hypothetical protein.)
genome : 41,755,010 - 41,757,285 (2,276)
query : 1 - 1,634 (1,634/1,634)
3 exons
identity = 0.996
5'(1.000;1.000;0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, nucl 6, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040872)
HIX0040872
HIT000520683 (
ENST00000422749
)
(Conserved hypothetical protein.)
genome : 41,755,010 - 41,757,285 (2,276)
query : 1 - 1,185 (1,185/1,185)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 13.6667, extr 3,
cyto_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040872)
HIX0040872
HIT000525385 (
ENST00000427451
)
(Conserved hypothetical protein.)
genome : 41,755,010 - 41,757,285 (2,276)
query : 1 - 1,640 (1,640/1,640)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, nucl 6, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040872)
HIX0040872
HIT000541980 (
ENST00000444046
)
(Conserved hypothetical protein.)
genome : 41,755,010 - 41,757,285 (2,276)
query : 1 - 1,153 (1,153/1,153)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 7, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040872)
HIX0040872
HIT000553288 (
ENST00000455354
)
(Conserved hypothetical protein.)
genome : 41,755,010 - 41,757,285 (2,276)
query : 1 - 1,282 (1,282/1,282)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 13.6667, extr 3,
cyto_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040872)
HIX0040872
HIT000725565 (
NR_038896
)
(Conserved hypothetical protein.)
genome : 41,755,010 - 41,757,285 (2,276)
query : 1 - 1,640 (1,640/1,640)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, nucl 6, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040872)
HIX0040872
HIT000725567 (
NR_038898
)
(Conserved hypothetical protein.)
genome : 41,755,010 - 41,757,285 (2,276)
query : 1 - 1,282 (1,282/1,282)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 13.6667, extr 3,
cyto_pero 2.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040872)
HIX0040872
HIT000725569 (
NR_038900
)
(Conserved hypothetical protein.)
genome : 41,755,010 - 41,757,285 (2,276)
query : 1 - 1,153 (1,153/1,153)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 7, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040872)
HIX0040872
HIT000079081
(
AF401031
)
(Conserved hypothetical protein.)
genome : 41,755,010 - 41,756,912 (1,903)
query : 1 - 780 (780/780)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 7, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040872)
HIX0040872
HIT000079082
(
AF401032
)
(Conserved hypothetical protein.)
genome : 41,755,010 - 41,756,911 (1,902)
query : 1 - 1,266 (1,266/1,266)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, nucl 6, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040872)
HIX0040872
HIT000079084
(
AF401034
)
(Conserved hypothetical protein.)
genome : 41,755,010 - 41,756,911 (1,902)
query : 1 - 811 (811/811)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 13.6667, extr 3,
cyto_pero 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040872)
HIX0040872
HIT000725568 (
NR_038899
)
(Conserved hypothetical protein.)
genome : 41,755,011 - 41,757,285 (2,275)
query : 1 - 1,184 (1,184/1,184)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 13.6667, extr 3,
cyto_pero 2.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040872)
HIX0040872
HIT000079085
(
AF401035
)
(Conserved hypothetical protein.)
genome : 41,755,011 - 41,757,283 (2,273)
query : 1 - 1,182 (1,182/1,182)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 13.6667, extr 3,
cyto_pero 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040872)
HIX0040872
HIT000264634
(
BC071816
)
(Conserved hypothetical protein.)
genome : 41,755,253 - 41,756,908 (1,656)
query : 1 - 533 (533/562)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 7, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040872)
HIX0138676
HIT000470417 (
ENST00000384418
)
(Non-protein coding transcript.)
genome : 41,885,071 - 41,885,206 (136)
query : 1 - 136 (136/136)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138676)
HIX0175092
HIT000539844 (
ENST00000441910
)
(Hypothetical short protein.)
genome : 41,987,304 - 42,002,693 (15,390)
query : 1 - 464 (464/464)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11, nucl 6, extr 5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175092)
HIX0175092
HIT000538297 (
ENST00000440363
)
(Hypothetical short protein.)
genome : 41,990,433 - 42,002,693 (12,261)
query : 1 - 720 (720/720)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 11, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175092)
HIX0175092
HIT000726838 (
NR_046774
)
(Hypothetical short protein.)
genome : 41,990,433 - 42,002,693 (12,261)
query : 1 - 720 (720/720)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 11, cyto_nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175092)
HIX0197156
pHIT000121900 ( pHIT000121900 )
Representative transcript
(Hypothetical protein.)
genome : 41,990,683 - 42,067,571 (76,889)
query : 1 - 432 (432/432)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197156)
CAGE tag :
T21F026FFC70
HIX0060055
HIT000328533
(
AB074277
)
Representative transcript
(Conserved hypothetical protein.)
genome : 42,011,011 - 42,012,825 (1,815)
query : 1 - 1,844 (1,844/1,844)
1 exon
identity = 0.981
5'(0.981)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 5, cyto 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0060055)
HIX0227118
HIT000128229 (
ENST00000333229
)
(Bromodomain containing protein.)
genome : 40,556,102 - 40,685,745 (129,644)
query : 1 - 10,141 (10,141/10,141)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000207502 (
NM_018963
)
(Bromodomain containing protein.)
genome : 40,557,404 - 40,685,712 (128,309)
query : 1 - 8,806 (8,806/8,826)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000211430 (
NM_033656
)
(Bromodomain containing protein.)
genome : 40,557,404 - 40,685,712 (128,309)
query : 1 - 17,886 (17,886/17,906)
41 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000246587
(
AJ292465
)
Representative transcript
(Bromodomain and WD repeat-containing protein 1; WD repeat-containing protein 9;)
genome : 40,558,069 - 40,685,496 (127,428)
query : 1 - 7,925 (7,925/7,925)
42 exons
identity = 1.000
3'(1.000;1.000;0.999;1.000;0.995;1.000;1.000;
1.000;0.976;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR018359 : Bromodomain, conserved site
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000135079 (
ENST00000342449
)
(Bromodomain containing protein.)
genome : 40,562,145 - 40,685,496 (123,352)
query : 1 - 12,929 (12,929/12,929)
41 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000245233
(
AJ238214
)
(Bromodomain and WD repeat-containing protein 1; WD repeat-containing protein 9;)
genome : 40,562,172 - 40,685,516 (123,345)
query : 1 - 12,935 (12,935/12,935)
41 exons
identity = 0.996
3'(0.993;0.999;1.000;1.000;1.000;1.000;1.000;
0.976;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR018359 : Bromodomain, conserved site
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000242061
(
AB080586
)
(Bromodomain and WD repeat-containing protein 1 isoform B.)
genome : 40,565,743 - 40,685,516 (119,774)
query : 1 - 9,352 (9,352/9,380)
41 exons
identity = 0.999
3'(0.999;0.999;1.000;1.000;1.000;1.000;1.000;
0.976;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;0.993)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR018359 : Bromodomain, conserved site
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000242062
(
AB080587
)
(Bromodomain and WD repeat-containing protein 1; WD repeat-containing protein 9;)
genome : 40,565,743 - 40,685,516 (119,774)
query : 1 - 7,605 (7,605/7,633)
42 exons
identity = 0.999
3'(1.000;1.000;0.999;1.000;1.000;1.000;1.000;
1.000;0.976;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;0.993)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR018359 : Bromodomain, conserved site
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000362078 (
ENST00000380800
)
(Bromodomain containing protein.)
genome : 40,565,743 - 40,685,516 (119,774)
query : 1 - 7,605 (7,605/7,605)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227118
HIT000246588
(
AJ292466
)
(Bromodomain and WD repeat-containing protein 1 isoform B.)
genome : 40,567,130 - 40,685,496 (118,367)
query : 1 - 7,939 (7,939/7,939)
41 exons
identity = 0.997
3'(0.992;0.999;1.000;0.995;1.000;1.000;1.000;
0.976;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
IPR018359 : Bromodomain, conserved site
IPR019775 : WD40 repeat, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227118)
HIX0227113
HIT000079478
(
AF426266
)
Representative transcript
(Conserved hypothetical protein.)
genome : 40,969,076 - 40,984,368 (15,293)
query : 1 - 1,069 (1,069/1,088)
3 exons
identity = 0.997
3'(0.996;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 9.5, cyto_nucl 9.5, cyto_mito 8,
cyto_pero 6.66667, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227113)
HIX0227113
HIT000361890 (
ENST00000380612
)
(Conserved hypothetical protein.)
genome : 40,969,074 - 40,984,368 (15,295)
query : 1 - 1,071 (1,071/1,071)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 9.5, cyto_nucl 9.5, cyto_mito 7.5,
cyto_pero 6.66667, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227113)
HIX0227113
HIT000388056
(
BC119737
)
(Conserved hypothetical protein.)
genome : 40,969,528 - 40,984,342 (14,815)
query : 1 - 591 (591/591)
3 exons
identity = 0.997
3'(0.995;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 9.5, cyto_nucl 9.5, cyto_mito 8,
cyto_pero 6.66667, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227113)
HIX0227113
HIT000388057
(
BC119738
)
(Conserved hypothetical protein.)
genome : 40,969,528 - 40,984,342 (14,815)
query : 1 - 591 (591/591)
3 exons
identity = 0.998
3'(0.997;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 9.5, cyto_nucl 9.5, cyto_mito 8,
cyto_pero 6.66667, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227113)
HIX0197155
pHIT000121898 ( pHIT000121898 )
Representative transcript
(Hypothetical protein.)
genome : 41,581,035 - 41,611,111 (30,077)
query : 1 - 414 (414/414)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197155)
CAGE tag :
T21R026B1697
HIX0197156
pHIT000121900 ( pHIT000121900 )
Representative transcript
(Hypothetical protein.)
genome : 41,990,683 - 42,067,571 (76,889)
query : 1 - 432 (432/432)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197156)
CAGE tag :
T21F026FFC70
AF064859.1
40500001-40534651 F +
NCBI
AF129408.4
40534652-40645444 F +
NCBI
AF064861.5
40645445-40777089 F +
NCBI
AF121781.1
40777090-40864790 F +
NCBI
AF121897.4
40864791-40942439 F +
NCBI
AF064860.2
40942440-41112560 F +
NCBI
AF121782.1
41112561-41235929 F +
NCBI
AF064857.1
41235930-41342672 F +
NCBI
AF045449.1
41342673-41361847 F +
NCBI
AF064862.2
41361848-41443051 F +
NCBI
AF064865.1
41443052-41593138 F +
NCBI
AF042091.1
41593139-41708467 F +
NCBI
AF042090.1
41708468-41831887 F +
NCBI
AF064863.3
41831888-41967219 F +
NCBI
AF165176.1
41967220-42049426 F +
NCBI
AF064864.1
42049427-42072375 F +
NCBI
AF064866.2
42072376-42100000 F +
NCBI