bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0204607
HIT000572934 (
ENST00000468361
)
(Conserved hypothetical protein.)
genome : 88,650,211 - 88,650,552 (342)
query : 1 - 342 (342/342)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 15.1667, cyto_plas 13.5,
nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204607)
HIX0204779
HIT000587695 (
ENST00000483823
)
(Conserved hypothetical protein.)
genome : 88,997,292 - 89,000,078 (2,787)
query : 1 - 2,787 (2,787/2,787)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 20, cyto 19, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204779)
HIX0204560
HIT000569170 (
ENST00000464421
)
(Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain containing protein.)
genome : 89,096,592 - 89,097,584 (993)
query : 1 - 993 (993/993)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 2, mito 1.5, cyto_nucl 1.5,
mito_pero 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204560)
HIX0030735
HIT000074098
(
AF213459
)
Representative transcript
(Ephrin type-A receptor 3; EC=2.7.10.1; EPH-like kinase 4; EK4; hEK4; HEK; Human embryo kinase; Tyrosine-protein kinase TYRO4; Tyrosine-protein kinase receptor ETK1; Eph-like tyrosine kinase 1; Precursor;)
genome : 89,156,674 - 89,531,283 (374,610)
query : 1 - 5,770 (5,770/5,799)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999;0.981)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001090 : Ephrin receptor ligand binding domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR001426 : Tyrosine-protein kinase, receptor class V, conserved site
IPR001660 : Sterile alpha motif domain
IPR003961 : Fibronectin type III
IPR008266 : Tyrosine-protein kinase, active site
IPR008979 : Galactose-binding domain-like
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR011510 : Sterile alpha motif, type 2
IPR011641 : Tyrosine-protein kinase ephrin type A/B receptor-like
IPR013761 : Sterile alpha motif/pointed domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
IPR027936 : Ephrin receptor, transmembrane domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005003 : Molecular Function : ephrin receptor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007169 : Biological Process : transmembrane receptor protein tyrosine kinase signaling pathway
0016021 : Cellular Component : integral component of membrane
0048013 : Biological Process : ephrin receptor signaling pathway
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24.5, extr_plas 13.5, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030735)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC093483
Equus
sp. (Horse) : ENSECAT00000025408
Oryzias
sp. (Medaka) : ENSORLT00000019849
Pongo
sp. (Orangutan) : ENSPPYT00000015863
Tetraodon
sp. (Tetraodon) : GSTENT00014176001
Tetraodon
sp. (Tetraodon) : GSTENT00028553001
Tetraodon
sp. (Tetraodon) : GSTENT00030431001
Gallus
sp. (Chicken) : M68514
Takifugu
sp. (Fugu) : SINFRUT00000128814
Takifugu
sp. (Fugu) : SINFRUT00000166501
Rattus
sp. (Rat) : U69278
Macaca
sp. (Macaque) : XM_001083136
Pan
sp. (Chimpanzee) : XM_001136396
Bos
sp. (Cow) : XM_001250249
Danio
sp. (Zebrafish) : XM_001336152
Monodelphis
sp. (Opossum) : XM_001380150
Canis
sp. (Dog) : XM_545052
HIX0030735
HIT000201940 (
NM_005233
)
(Ephrin type-A receptor 3; EC=2.7.10.1; EPH-like kinase 4; EK4; hEK4; HEK; Human embryo kinase; Tyrosine-protein kinase TYRO4; Tyrosine-protein kinase receptor ETK1; Eph-like tyrosine kinase 1; Precursor;)
genome : 89,156,674 - 89,531,283 (374,610)
query : 1 - 5,808 (5,808/5,837)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24.5, extr_plas 13.5, E.R. 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030735)
HIX0030735
HIT000130147 (
ENST00000336596
)
(Ephrin type-A receptor 3; EC=2.7.10.1; EPH-like kinase 4; EK4; hEK4; HEK; Human embryo kinase; Tyrosine-protein kinase TYRO4; Tyrosine-protein kinase receptor ETK1; Eph-like tyrosine kinase 1; Precursor;)
genome : 89,156,674 - 89,531,284 (374,611)
query : 1 - 5,809 (5,809/5,809)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24.5, extr_plas 13.5, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030735)
HIX0030735
HIT000318713 (
NM_182644
)
(Ephrin type-A receptor 3; EC=2.7.10.1; EPH-like kinase 4; EK4; hEK4; HEK; Human embryo kinase; Tyrosine-protein kinase TYRO4; Tyrosine-protein kinase receptor ETK1; Eph-like tyrosine kinase 1; Precursor;)
genome : 89,156,674 - 89,449,495 (292,822)
query : 1 - 2,684 (2,684/2,684)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26.5, extr_plas 14, lyso 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030735)
HIX0030735
HIT000260803
(
BC063282
)
(Ephrin type-A receptor 3; EC=2.7.10.1; EPH-like kinase 4; EK4; hEK4; HEK; Human embryo kinase; Tyrosine-protein kinase TYRO4; Tyrosine-protein kinase receptor ETK1; Eph-like tyrosine kinase 1; Precursor;)
genome : 89,156,771 - 89,531,267 (374,497)
query : 2 - 5,696 (5,695/5,711)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001090 : Ephrin receptor ligand binding domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR001426 : Tyrosine-protein kinase, receptor class V, conserved site
IPR001660 : Sterile alpha motif domain
IPR003961 : Fibronectin type III
IPR008266 : Tyrosine-protein kinase, active site
IPR008979 : Galactose-binding domain-like
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR011510 : Sterile alpha motif, type 2
IPR011641 : Tyrosine-protein kinase ephrin type A/B receptor-like
IPR013761 : Sterile alpha motif/pointed domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
IPR027936 : Ephrin receptor, transmembrane domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005003 : Molecular Function : ephrin receptor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007169 : Biological Process : transmembrane receptor protein tyrosine kinase signaling pathway
0016021 : Cellular Component : integral component of membrane
0048013 : Biological Process : ephrin receptor signaling pathway
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24.5, extr_plas 13.5, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030735)
HIX0030735
HIT000196556
(
M83941
)
(Ephrin type-A receptor 3; EC=2.7.10.1; EPH-like kinase 4; EK4; hEK4; HEK; Human embryo kinase; Tyrosine-protein kinase TYRO4; Tyrosine-protein kinase receptor ETK1; Eph-like tyrosine kinase 1; Precursor;)
genome : 89,156,805 - 89,528,751 (371,947)
query : 7 - 3,149 (3,143/3,149)
17 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;0.981;0.971)3'
coverage = 0.998
EC number :
EC 2.7.10.1
InterPro :
IPR001090 : Ephrin receptor ligand binding domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR001426 : Tyrosine-protein kinase, receptor class V, conserved site
IPR001660 : Sterile alpha motif domain
IPR003961 : Fibronectin type III
IPR008266 : Tyrosine-protein kinase, active site
IPR008979 : Galactose-binding domain-like
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR011510 : Sterile alpha motif, type 2
IPR011641 : Tyrosine-protein kinase ephrin type A/B receptor-like
IPR013761 : Sterile alpha motif/pointed domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
IPR027936 : Ephrin receptor, transmembrane domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005003 : Molecular Function : ephrin receptor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007169 : Biological Process : transmembrane receptor protein tyrosine kinase signaling pathway
0016021 : Cellular Component : integral component of membrane
0048013 : Biological Process : ephrin receptor signaling pathway
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24.5, extr_plas 13.5, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030735)
HIX0030735
HIT000074099
(
AF213460
)
(Ephrin type-A receptor 3; EC=2.7.10.1; EPH-like kinase 4; EK4; hEK4; HEK; Human embryo kinase; Tyrosine-protein kinase TYRO4; Tyrosine-protein kinase receptor ETK1; Eph-like tyrosine kinase 1; Precursor;)
genome : 89,156,812 - 89,449,495 (292,684)
query : 1 - 2,546 (2,546/2,546)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001090 : Ephrin receptor ligand binding domain
IPR001426 : Tyrosine-protein kinase, receptor class V, conserved site
IPR003961 : Fibronectin type III
IPR008979 : Galactose-binding domain-like
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR011641 : Tyrosine-protein kinase ephrin type A/B receptor-like
GO :
0005003 : Molecular Function : ephrin receptor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007169 : Biological Process : transmembrane receptor protein tyrosine kinase signaling pathway
0016021 : Cellular Component : integral component of membrane
0048013 : Biological Process : ephrin receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26.5, extr_plas 14, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030735)
HIX0030735
HIT000550382 (
ENST00000452448
)
(Ephrin type-A receptor 3; EC=2.7.10.1; EPH-like kinase 4; EK4; hEK4; HEK; Human embryo kinase; Tyrosine-protein kinase TYRO4; Tyrosine-protein kinase receptor ETK1; Eph-like tyrosine kinase 1; Precursor;)
genome : 89,156,812 - 89,449,495 (292,684)
query : 1 - 2,546 (2,546/2,546)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26.5, extr_plas 14, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030735)
HIX0030735
HIT000091231
(
BC026247
)
(Ephrin type-A receptor 3 isoform b precursor.)
genome : 89,156,826 - 89,528,793 (371,968)
query : 1 - 3,069 (3,069/3,098)
17 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.983;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001090 : Ephrin receptor ligand binding domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR001426 : Tyrosine-protein kinase, receptor class V, conserved site
IPR003961 : Fibronectin type III
IPR008266 : Tyrosine-protein kinase, active site
IPR008979 : Galactose-binding domain-like
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR011641 : Tyrosine-protein kinase ephrin type A/B receptor-like
IPR020635 : Tyrosine-protein kinase, catalytic domain
IPR027936 : Ephrin receptor, transmembrane domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005003 : Molecular Function : ephrin receptor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007169 : Biological Process : transmembrane receptor protein tyrosine kinase signaling pathway
0016021 : Cellular Component : integral component of membrane
0048013 : Biological Process : ephrin receptor signaling pathway
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26.5, extr_plas 14, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030735)
HIX0030735
HIT000597425 (
ENST00000494014
)
(Ephrin type-A receptor 3 isoform b precursor.)
genome : 89,156,826 - 89,528,809 (371,984)
query : 1 - 3,085 (3,085/3,085)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26.5, extr_plas 14, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030735)
HIX0030735
HIT000424208
(
AK291411
)
(Ephrin type-A receptor 3; EC=2.7.10.1; EPH-like kinase 4; EK4; hEK4; HEK; Human embryo kinase; Tyrosine-protein kinase TYRO4; Tyrosine-protein kinase receptor ETK1; Eph-like tyrosine kinase 1; Precursor;)
genome : 89,156,841 - 89,528,849 (372,009)
query : 1 - 3,207 (3,207/3,207)
17 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.997;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001090 : Ephrin receptor ligand binding domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR001426 : Tyrosine-protein kinase, receptor class V, conserved site
IPR001660 : Sterile alpha motif domain
IPR003961 : Fibronectin type III
IPR008266 : Tyrosine-protein kinase, active site
IPR008979 : Galactose-binding domain-like
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR011510 : Sterile alpha motif, type 2
IPR011641 : Tyrosine-protein kinase ephrin type A/B receptor-like
IPR013761 : Sterile alpha motif/pointed domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
IPR027936 : Ephrin receptor, transmembrane domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005003 : Molecular Function : ephrin receptor activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007169 : Biological Process : transmembrane receptor protein tyrosine kinase signaling pathway
0016021 : Cellular Component : integral component of membrane
0048013 : Biological Process : ephrin receptor signaling pathway
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25.5, extr_plas 13.5, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030735)
HIX0030735
HIT000649724
(
HM437236
)
(Ephrin type-A receptor 3; EC=2.7.10.1; EPH-like kinase 4; EK4; hEK4; HEK; Human embryo kinase; Tyrosine-protein kinase TYRO4; Tyrosine-protein kinase receptor ETK1; Eph-like tyrosine kinase 1; Precursor;)
genome : 89,259,232 - 89,259,531 (300)
query : 1 - 300 (300/300)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001090 : Ephrin receptor ligand binding domain
IPR001426 : Tyrosine-protein kinase, receptor class V, conserved site
IPR008979 : Galactose-binding domain-like
GO :
0005003 : Molecular Function : ephrin receptor activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007169 : Biological Process : transmembrane receptor protein tyrosine kinase signaling pathway
0016021 : Cellular Component : integral component of membrane
0048013 : Biological Process : ephrin receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, extr 7, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030735)
HIX0030735
HIT000007626
(
AK024352
)
(Conserved hypothetical protein.)
genome : 89,528,668 - 89,531,282 (2,615)
query : 1 - 2,616 (2,616/2,616)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 4, nucl 2, golg 2, E.R._mito 2,
cyto_mito 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030735)
HIX0204345
HIT000567942 (
ENST00000463134
)
(Cytochrome c oxidase subunit II C-terminal domain containing protein.)
genome : 89,637,036 - 89,637,720 (685)
query : 1 - 685 (685/685)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204345)
HIX0204746
HIT000585172 (
ENST00000481192
)
(Cytochrome c oxidase subunit I family protein.)
genome : 89,637,864 - 89,639,247 (1,384)
query : 1 - 1,384 (1,384/1,384)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, mito_pero 11.5, extr 5, nucl 2.5,
cyto_nucl 2.5, pero 2.5, extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204746)
AC108750.3
88500001-88574458 F -
NCBI
AC117510.3
88574459-88659050 F +
NCBI
AC131153.2
88659051-88783664 F -
NCBI
AC128651.6
88783665-88848720 F -
NCBI
AC119724.8
88848721-88995444 F +
NCBI
AC106715.5
88995445-89143664 F -
NCBI
AC138973.2
89143665-89284090 F +
NCBI
AC109129.3
89284091-89463239 F -
NCBI
AC107028.5
89463240-89587957 F -
NCBI
AC026305.20
89587958-89689096 F +
NCBI
AC068757.20
89689097-89845523 F -
NCBI
AC133478.2
89845524-89981276 F -
NCBI
AC095349.10
89981277-90100000 F +
NCBI