bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0004465
HIT000206268 (
NM_016599
)
(Myozenin-2; Calsarcin-1; FATZ-related protein 2;)
genome : 120,056,939 - 120,108,944 (52,006)
query : 1 - 2,597 (2,597/2,604)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 7, cyto_plas 7, cyto_golg 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004465)
HIX0004465
HIT000117558 (
ENST00000307128
)
(Myozenin-2; Calsarcin-1; FATZ-related protein 2;)
genome : 120,056,939 - 120,108,944 (52,006)
query : 1 - 2,597 (2,597/2,597)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 7, cyto_plas 7, cyto_golg 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004465)
HIX0004465
HIT000246034
(
AJ252149
)
(Myozenin-2; Calsarcin-1; FATZ-related protein 2;)
genome : 120,057,001 - 120,107,549 (50,549)
query : 1 - 1,140 (1,140/1,140)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008438 : Myozenin
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 7, cyto_plas 7, cyto_golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004465)
HIX0004465
HIT000432722
(
AK313856
)
(Conserved hypothetical protein.)
genome : 120,057,004 - 120,107,355 (50,352)
query : 1 - 943 (943/943)
6 exons
identity = 0.998
5'(0.993;1.000;0.994;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8.5, cyto_nucl 7.5, extr_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004465)
HIX0004465
HIT000083182
(
AY013295
)
Representative transcript
(Myozenin-2; Calsarcin-1; FATZ-related protein 2;)
genome : 120,057,021 - 120,108,936 (51,916)
query : 1 - 2,505 (2,505/2,532)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.995;0.997)3'
coverage = 1.000
InterPro :
IPR008438 : Myozenin
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 7, cyto_plas 7, cyto_golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004465)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC024360
Danio
sp. (Zebrafish) : BC064307
Bos
sp. (Cow) : BC103121
Gallus
sp. (Chicken) : BX935788
Tetraodon
sp. (Tetraodon) : CR672441
Pongo
sp. (Orangutan) : CR860507
Canis
sp. (Dog) : ENSCAFT00000036594
Oryzias
sp. (Medaka) : ENSORLT00000013172
Oryzias
sp. (Medaka) : ENSORLT00000022018
Tetraodon
sp. (Tetraodon) : GSTENT00023242001
Takifugu
sp. (Fugu) : SINFRUT00000171002
Rattus
sp. (Rat) : XM_001075328
Macaca
sp. (Macaque) : XM_001098621
Pan
sp. (Chimpanzee) : XM_001148878
Monodelphis
sp. (Opossum) : XM_001371696
Equus
sp. (Horse) : XM_001503234
HIX0004465
HIT000037993
(
BC017402
)
(Myozenin-2; Calsarcin-1; FATZ-related protein 2;)
genome : 120,057,032 - 120,107,541 (50,510)
query : 4 - 1,104 (1,101/1,132)
6 exons
identity = 0.999
5'(1.000;1.000;0.994;1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR008438 : Myozenin
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 7, cyto_plas 7, cyto_golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004465)
HIX0004465
HIT000039030
(
BC020932
)
(Myozenin-2; Calsarcin-1; FATZ-related protein 2;)
genome : 120,057,065 - 120,107,544 (50,480)
query : 1 - 1,071 (1,071/1,101)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR008438 : Myozenin
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 7, cyto_plas 7, cyto_golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004465)
HIX0004465
HIT000032281
(
BC005195
)
(Myozenin-2; Calsarcin-1; FATZ-related protein 2;)
genome : 120,057,067 - 120,107,537 (50,471)
query : 1 - 1,062 (1,062/1,092)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR008438 : Myozenin
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 7, cyto_plas 7, cyto_golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004465)
HIX0004465
HIT000100134
(
BT007214
)
(Myozenin-2; Calsarcin-1; FATZ-related protein 2;)
genome : 120,057,681 - 120,107,353 (49,673)
query : 1 - 793 (793/795)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR008438 : Myozenin
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 7, cyto_plas 7, cyto_golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004465)
HIX0004465
HIT000061891
(
AF007160
)
(Myozenin-2; Calsarcin-1; FATZ-related protein 2;)
genome : 120,085,377 - 120,107,533 (22,157)
query : 5 - 590 (586/599)
2 exons
identity = 0.997
5'(0.994;0.998)3'
coverage = 0.978
InterPro :
IPR008438 : Myozenin
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, nucl 6.5, extr 6, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004465)
HIX0004466
HIT000022964
(
AK098126
)
Representative transcript
(39S ribosomal protein L42, mitochondrial; L42mt; MRP-L42; 28S ribosomal protein S32, mitochondrial; MRP-S32; S32mt; 39S ribosomal protein L31, mitochondrial; L31mt; MRP-L31; Precursor;)
genome : 120,113,928 - 120,133,667 (19,740)
query : 1 - 2,096 (2,096/2,096)
4 exons
identity = 0.993
3'(0.991;1.000;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR019346 : Ribosomal protein S32, mitochondrial
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9.5, cyto_nucl 8.83333, nucl 6,
cyto_pero 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004466)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : ENSRNOT00000011332
HIX0004466
HIT000124712 (
ENST00000326780
)
(39S ribosomal protein L42, mitochondrial; L42mt; MRP-L42; 28S ribosomal protein S32, mitochondrial; MRP-S32; S32mt; 39S ribosomal protein L31, mitochondrial; L31mt; MRP-L31; Precursor;)
genome : 120,113,928 - 120,133,667 (19,740)
query : 1 - 2,097 (2,097/2,097)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9.5, cyto_nucl 8.83333, nucl 6,
cyto_pero 5.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004466)
HIX0004466
HIT000603546 (
ENST00000503243
)
(39S ribosomal protein L42, mitochondrial; L42mt; MRP-L42; 28S ribosomal protein S32, mitochondrial; MRP-S32; S32mt; 39S ribosomal protein L31, mitochondrial; L31mt; MRP-L31; Precursor;)
genome : 120,113,928 - 120,133,667 (19,740)
query : 1 - 2,097 (2,097/2,097)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 6.5, nucl 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004466)
HIX0004466
HIT000428854
(
AK309988
)
(39S ribosomal protein L42, mitochondrial; L42mt; MRP-L42; 28S ribosomal protein S32, mitochondrial; MRP-S32; S32mt; 39S ribosomal protein L31, mitochondrial; L31mt; MRP-L31; Precursor;)
genome : 120,114,843 - 120,133,799 (18,957)
query : 1 - 998 (998/1,005)
3 exons
identity = 0.996
3'(0.996;1.000;0.992)5'
coverage = 0.993
InterPro :
IPR019346 : Ribosomal protein S32, mitochondrial
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 9, extr_plas 9, nucl 6, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004466)
HIX0004466
HIT000615248 (
ENST00000515843
)
(39S ribosomal protein L42, mitochondrial; L42mt; MRP-L42; 28S ribosomal protein S32, mitochondrial; MRP-S32; S32mt; 39S ribosomal protein L31, mitochondrial; L31mt; MRP-L31; Precursor;)
genome : 120,114,843 - 120,133,799 (18,957)
query : 1 - 998 (998/998)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 9, extr_plas 9, nucl 6, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004466)
HIX0004467
HIT000057483
(
BX648836
)
(Conserved hypothetical protein.)
genome : 120,133,742 - 120,142,636 (8,895)
query : 3 - 4,222 (4,220/4,239)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 6, mito 6, cyto_mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004467
HIT000614145 (
ENST00000514665
)
(Conserved hypothetical protein.)
genome : 120,133,742 - 120,142,650 (8,909)
query : 1 - 4,233 (4,233/4,233)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 6, mito 6, cyto_mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004467
HIT000260632
(
BC062741
)
(Conserved hypothetical protein.)
genome : 120,133,768 - 120,135,273 (1,506)
query : 2 - 311 (310/341)
2 exons
identity = 0.997
5'(0.996;1.000)3'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 6, cyto_nucl 4, nucl 3.5, cyto 3.5,
mito_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004467
HIT000613814 (
ENST00000514305
)
(Conserved hypothetical protein.)
genome : 120,133,898 - 120,141,366 (7,469)
query : 1 - 504 (504/504)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 13.5, cyto_nucl 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004467
HIT000610496 (
ENST00000510737
)
(Conserved hypothetical protein.)
genome : 120,134,334 - 120,160,467 (26,134)
query : 1 - 534 (534/534)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004467
HIT000548185 (
ENST00000450251
)
(Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain containing protein.)
genome : 120,160,371 - 120,216,672 (56,302)
query : 1 - 6,072 (6,072/6,072)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11.5, cyto 6.5, mito 6, extr 3,
golg 3, E.R._mito 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004467
HIT000056986
(
BX648339
)
Representative transcript
(Conserved hypothetical protein.)
genome : 120,160,795 - 120,215,793 (54,999)
query : 1 - 4,803 (4,803/4,868)
16 exons
identity = 0.999
5'(1.000;0.989;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;0.999;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 9.5, extr 7, mito 5, nucl 3.5,
extr_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004467
HIT000609616 (
ENST00000509769
)
(Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain containing protein.)
genome : 120,160,795 - 120,215,793 (54,999)
query : 1 - 4,803 (4,803/4,803)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_mito 11.1667, cyto_pero 8.66667,
mito 8.5, cyto_nucl 7.16667, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004467
HIT000249158
(
AJ583824
)
(Inactive ubiquitin carboxyl-terminal hydrolase 53; Inactive ubiquitin-specific peptidase 53;)
genome : 120,160,915 - 120,214,366 (53,452)
query : 1 - 3,219 (3,219/3,219)
15 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.976;0.972;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.5, cyto 7.5, mito 6, extr 3,
golg 3, E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004467
HIT000001065
(
AB037771
)
(Inactive ubiquitin carboxyl-terminal hydrolase 53.)
genome : 120,177,595 - 120,215,783 (38,189)
query : 1 - 4,153 (4,153/4,153)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 14, cyto 13, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004467
HIT000607875 (
ENST00000507906
)
(Conserved hypothetical protein.)
genome : 120,182,948 - 120,192,508 (9,561)
query : 1 - 546 (546/546)
5 exons
identity = 0.989
5'(1.000;0.983;0.974;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004467
HIT000008575
(
AK025301
)
(Conserved hypothetical protein.)
genome : 120,188,536 - 120,194,471 (5,936)
query : 1 - 2,423 (2,423/2,439)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13.5, nucl 9, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004467
HIT000610605 (
ENST00000510852
)
(Conserved hypothetical protein.)
genome : 120,188,536 - 120,194,471 (5,936)
query : 1 - 2,423 (2,423/2,437)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 12, nucl 10, mito 5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004467
HIT000006073
(
AK022799
)
(Conserved hypothetical protein.)
genome : 120,212,336 - 120,215,900 (3,565)
query : 1 - 2,484 (2,484/2,484)
2 exons
identity = 0.996
5'(1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004467
HIT000008507
(
AK025233
)
(Conserved hypothetical protein.)
genome : 120,213,636 - 120,215,901 (2,266)
query : 1 - 2,265 (2,265/2,282)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 10.5, cyto_nucl 10.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004467
HIT000037983
(
BC017382
)
(Conserved hypothetical protein.)
genome : 120,213,752 - 120,215,519 (1,768)
query : 4 - 1,770 (1,767/1,798)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 9, nucl 8.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004467
HIT000066727
(
AF085848
)
(Hypothetical short protein.)
genome : 120,216,211 - 120,216,673 (463)
query : 11 - 475 (465/484)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, plas 6, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004467)
HIX0004468
HIT000654608 (
NM_001170330
)
(Uncharacterized protein C4orf3; Hepatitis C virus F protein-transactivated protein 1; HCV F-transactivated protein 1;)
genome : 120,217,574 - 120,225,600 (8,027)
query : 1 - 2,960 (2,960/2,975)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11.5, cyto 8.5, plas 4, mito 3,
E.R. 3, E.R._mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004468)
HIX0004468
HIT000315488 (
NM_001001701
)
(Uncharacterized protein C4orf3; Hepatitis C virus F protein-transactivated protein 1; HCV F-transactivated protein 1;)
genome : 120,217,574 - 120,221,968 (4,395)
query : 1 - 2,839 (2,839/2,854)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, cyto 3, nucl 2, cyto_golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004468)
HIX0004468
HIT000008977
(
AK025703
)
(Uncharacterized protein C4orf3; Hepatitis C virus F protein-transactivated protein 1; HCV F-transactivated protein 1;)
genome : 120,218,207 - 120,221,730 (3,524)
query : 3 - 1,971 (1,969/1,990)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, cyto 3, nucl 2, cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004468)
HIX0004468
HIT000482184 (
ENST00000399075
)
(Uncharacterized protein C4orf3; Hepatitis C virus F protein-transactivated protein 1; HCV F-transactivated protein 1;)
genome : 120,218,207 - 120,225,600 (7,394)
query : 1 - 2,327 (2,327/2,327)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11.5, cyto 8.5, plas 4, mito 3,
E.R. 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004468)
HIX0004468
HIT000037990
(
BC017399
)
(Uncharacterized protein C4orf3; Hepatitis C virus F protein-transactivated protein 1; HCV F-transactivated protein 1;)
genome : 120,218,790 - 120,221,790 (3,001)
query : 2 - 1,445 (1,444/1,469)
2 exons
identity = 0.997
3'(0.997;0.993)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, cyto 4, nucl 2, cyto_mito 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004468)
HIX0004468
HIT000007811
(
AK024537
)
(Conserved hypothetical protein.)
genome : 120,218,790 - 120,219,608 (819)
query : 1 - 819 (819/835)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004468)
HIX0004468
HIT000066083
(
AF075061
)
(Uncharacterized protein C4orf3; Hepatitis C virus F protein-transactivated protein 1; HCV F-transactivated protein 1;)
genome : 120,219,647 - 120,221,776 (2,130)
query : 1 - 574 (574/574)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, cyto 3, nucl 2, cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004468)
HIX0004468
HIT000604354 (
ENST00000504110
)
(Uncharacterized protein C4orf3; Hepatitis C virus F protein-transactivated protein 1; HCV F-transactivated protein 1;)
genome : 120,219,854 - 120,222,076 (2,223)
query : 1 - 667 (667/667)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, cyto 3, nucl 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004468)
HIX0004468
HIT000255725
(
AY605045
)
Representative transcript
(Uncharacterized protein C4orf3; Hepatitis C virus F protein-transactivated protein 1; HCV F-transactivated protein 1;)
genome : 120,221,491 - 120,225,600 (4,110)
query : 1 - 599 (599/600)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11.5, cyto 8.5, plas 4, mito 3,
E.R. 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004468)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : BC114847
Macaca
sp. (Macaque) : XM_001099141
Pan
sp. (Chimpanzee) : XM_517411
HIX0120286
HIT000439698
(
DQ573167
)
Representative transcript
(Non-protein coding transcript.)
genome : 120,222,201 - 120,222,230 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0120286)
HIX0004469
HIT000197183 (
NM_000134
)
(Fatty acid-binding protein, intestinal; Fatty acid-binding protein 2; Intestinal-type fatty acid-binding protein; I-FABP;)
genome : 120,238,405 - 120,243,316 (4,912)
query : 1 - 2,249 (2,249/2,271)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 17.1667, cyto_plas 11.5, nucl 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004469)
HIX0004469
HIT000008353
(
AK025079
)
(Fatty acid-binding protein, intestinal; Fatty acid-binding protein 2; Intestinal-type fatty acid-binding protein; I-FABP;)
genome : 120,238,405 - 120,243,289 (4,885)
query : 1 - 2,221 (2,221/2,243)
4 exons
identity = 0.998
3'(0.999;1.000;0.983;1.000)5'
coverage = 1.000
InterPro :
IPR000463 : Cytosolic fatty-acid binding
IPR000566 : Lipocalin/cytosolic fatty-acid binding domain
IPR011038 : Calycin-like
IPR012674 : Calycin
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 17.1667, cyto_plas 11.5, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004469)
HIX0004469
HIT000111102 (
ENST00000274024
)
(Fatty acid-binding protein, intestinal; Fatty acid-binding protein 2; Intestinal-type fatty acid-binding protein; I-FABP;)
genome : 120,238,405 - 120,243,545 (5,141)
query : 1 - 2,478 (2,478/2,478)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 17.1667, cyto_plas 11.5, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004469)
HIX0004469
HIT000263768_03
(
BC069617
)
(Fatty acid-binding protein, intestinal; Fatty acid-binding protein 2; Intestinal-type fatty acid-binding protein; I-FABP;)
genome : 120,238,553 - 120,243,300 (4,748)
query : 1 - 2,083 (2,083/2,138)
4 exons
identity = 0.998
3'(0.998;1.000;0.994;1.000)5'
coverage = 0.974
InterPro :
IPR000463 : Cytosolic fatty-acid binding
IPR000566 : Lipocalin/cytosolic fatty-acid binding domain
IPR011038 : Calycin-like
IPR012674 : Calycin
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 17.1667, cyto_plas 11.5, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004469)
HIX0004469
HIT000263617
(
BC069466
)
Representative transcript
(Fatty acid-binding protein, intestinal; Fatty acid-binding protein 2; Intestinal-type fatty acid-binding protein; I-FABP;)
genome : 120,238,553 - 120,243,307 (4,755)
query : 1 - 2,092 (2,092/2,092)
4 exons
identity = 0.999
3'(0.999;1.000;0.994;1.000)5'
coverage = 1.000
InterPro :
IPR000463 : Cytosolic fatty-acid binding
IPR000566 : Lipocalin/cytosolic fatty-acid binding domain
IPR011038 : Calycin-like
IPR012674 : Calycin
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 17.1667, cyto_plas 11.5, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004469)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : AF541953
Equus
sp. (Horse) : AY536518
Bos
sp. (Cow) : AY911349
Gallus
sp. (Chicken) : BX932340
Tetraodon
sp. (Tetraodon) : CR711966
Oryzias
sp. (Medaka) : ENSORLT00000005194
Pongo
sp. (Orangutan) : ENSPPYT00000017466
Rattus
sp. (Rat) : M35992
Mus
sp. (Mouse) : M65034
Takifugu
sp. (Fugu) : SINFRUT00000149155
Takifugu
sp. (Fugu) : SINFRUT00000154534
Macaca
sp. (Macaque) : XM_001099243
Pan
sp. (Chimpanzee) : XM_001149448
Monodelphis
sp. (Opossum) : XM_001363273
Canis
sp. (Dog) : XM_545047
HIX0004469
HIT000263788
(
BC069637
)
(Fatty acid-binding protein, intestinal; Fatty acid-binding protein 2; Intestinal-type fatty acid-binding protein; I-FABP;)
genome : 120,238,553 - 120,243,307 (4,755)
query : 1 - 2,092 (2,092/2,092)
4 exons
identity = 0.999
3'(0.999;1.000;0.994;1.000)5'
coverage = 1.000
InterPro :
IPR000463 : Cytosolic fatty-acid binding
IPR000566 : Lipocalin/cytosolic fatty-acid binding domain
IPR011038 : Calycin-like
IPR012674 : Calycin
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 17.1667, cyto_plas 11.5, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004469)
HIX0004469
HIT000263776
(
BC069625
)
(Fatty acid-binding protein, intestinal; Fatty acid-binding protein 2; Intestinal-type fatty acid-binding protein; I-FABP;)
genome : 120,238,557 - 120,243,307 (4,751)
query : 1 - 2,088 (2,088/2,088)
4 exons
identity = 0.999
3'(0.999;1.000;0.994;1.000)5'
coverage = 1.000
InterPro :
IPR000463 : Cytosolic fatty-acid binding
IPR000566 : Lipocalin/cytosolic fatty-acid binding domain
IPR011038 : Calycin-like
IPR012674 : Calycin
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 17.1667, cyto_plas 11.5, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004469)
HIX0004469
HIT000340049
(
BC111791
)
(Fatty acid-binding protein, intestinal; Fatty acid-binding protein 2; Intestinal-type fatty acid-binding protein; I-FABP;)
genome : 120,238,978 - 120,243,316 (4,339)
query : 1 - 1,677 (1,677/1,677)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000463 : Cytosolic fatty-acid binding
IPR000566 : Lipocalin/cytosolic fatty-acid binding domain
IPR011038 : Calycin-like
IPR012674 : Calycin
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0008289 : Molecular Function : lipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 17.1667, cyto_plas 11.5, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004469)
HIX0004470
HIT000608608 (
ENST00000508691
)
(Kelch-like protein 2 isoform 3.)
genome : 120,255,484 - 120,299,388 (43,905)
query : 1 - 521 (521/521)
4 exons
identity = 0.994
5'(1.000;1.000;1.000;0.982)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004470)
HIX0004470
HIT000022555
(
AK097701
)
Representative transcript
(Protein capicua homolog.)
genome : 120,299,287 - 120,326,770 (27,484)
query : 1 - 1,820 (1,820/1,820)
2 exons
identity = 0.987
5'(0.971;0.988)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 6.5, cyto_nucl 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004470)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001149520
HIX0205097
HIT000606086_01 (
ENST00000505994
)
(Glycerol kinase family protein.)
genome : 120,312,986 - 120,316,490 (3,505)
query : 1 - 3,505 (3,505/3,505)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, mito 10, cyto_nucl 10, E.R._mito 6.5,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205097)
HIX0205097
HIT000575797_01 (
ENST00000471362
)
(Carbohydrate kinase, FGGY, N-terminal domain containing protein.)
genome : 120,315,540 - 120,316,143 (604)
query : 1 - 420 (420/420)
3 exons
identity = 0.960
3'(0.981;0.987;0.930)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 6.33333, cyto 6, nucl 5.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205097)
HIX0031765
HIT000659894_02 (
NR_037596
)
(Hypothetical protein.)
genome : 120,326,678 - 120,331,815 (5,138)
query : 1 - 4,818 (4,818/4,818)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 10, cyto 4, cyto_pero 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000441803_05
(
DQ575272
)
(Non-protein coding transcript.)
genome : 120,327,213 - 120,327,242 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000443880_08
(
DQ577349
)
(Non-protein coding transcript.)
genome : 120,327,573 - 120,327,602 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000451514_08
(
DQ584983
)
(Non-protein coding transcript.)
genome : 120,327,576 - 120,327,606 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000450463_08
(
DQ583932
)
(Non-protein coding transcript.)
genome : 120,328,263 - 120,328,292 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000441206_03
(
DQ574675
)
(Non-protein coding transcript.)
genome : 120,328,286 - 120,328,315 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000457489_09
(
DQ590958
)
(Non-protein coding transcript.)
genome : 120,328,530 - 120,328,560 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000461099_03
(
DQ594568
)
(Non-protein coding transcript.)
genome : 120,328,566 - 120,328,596 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000441153_08
(
DQ574622
)
(Non-protein coding transcript.)
genome : 120,328,763 - 120,328,793 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000439481_06
(
DQ572950
)
(Non-protein coding transcript.)
genome : 120,328,997 - 120,329,026 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000489570
(
AK294946
)
Representative transcript
(Conserved hypothetical protein.)
genome : 120,329,122 - 120,330,615 (1,494)
query : 1 - 1,494 (1,494/1,494)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 10, cyto 4, cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000442595_04
(
DQ576064
)
(Non-protein coding transcript.)
genome : 120,329,169 - 120,329,200 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000461656
(
DQ595125
)
(Non-protein coding transcript.)
genome : 120,329,285 - 120,329,314 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000459005_05
(
DQ592474
)
(Non-protein coding transcript.)
genome : 120,329,334 - 120,329,363 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000466330_05
(
DQ599799
)
(Non-protein coding transcript.)
genome : 120,329,334 - 120,329,363 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000460021_13
(
DQ593490
)
(Non-protein coding transcript.)
genome : 120,329,335 - 120,329,364 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000442515_09
(
DQ575984
)
(Non-protein coding transcript.)
genome : 120,329,363 - 120,329,393 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000442514_09
(
DQ575983
)
(Non-protein coding transcript.)
genome : 120,329,364 - 120,329,393 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000441203_08
(
DQ574672
)
(Non-protein coding transcript.)
genome : 120,329,803 - 120,329,833 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000441190_05
(
DQ574659
)
(Non-protein coding transcript.)
genome : 120,329,834 - 120,329,864 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000441191_05
(
DQ574660
)
(Non-protein coding transcript.)
genome : 120,329,833 - 120,329,864 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000441189_05
(
DQ574658
)
(Non-protein coding transcript.)
genome : 120,329,834 - 120,329,864 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000442760
(
DQ576229
)
(Non-protein coding transcript.)
genome : 120,330,136 - 120,330,166 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000461444
(
DQ594913
)
(Non-protein coding transcript.)
genome : 120,330,267 - 120,330,297 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000657908_02 (
NR_029401
)
(Hypothetical protein.)
genome : 120,330,338 - 120,375,793 (45,456)
query : 1 - 3,834 (3,834/3,834)
19 exons
identity = 0.961
3'(0.973;0.983;0.963;1.000;0.982;0.985;0.990;
0.976;1.000;0.979;0.914;0.950;0.955;0.948;
0.959;0.992;0.939;0.879;0.949)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 9.66667, nucl 9.5, cyto 6.5,
cyto_pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000444919_04
(
DQ578388
)
(Non-protein coding transcript.)
genome : 120,330,423 - 120,330,454 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000464938_06
(
DQ598407
)
(Non-protein coding transcript.)
genome : 120,330,484 - 120,330,513 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031761
HIT000260843
(
BC063381
)
Representative transcript
(Non-protein coding transcript.)
genome : 120,330,488 - 120,331,388 (901)
query : 1 - 901 (901/921)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031761)
HIX0031765
HIT000680356_02 (
ENST00000567343
)
(Hypothetical protein.)
genome : 120,330,488 - 120,331,388 (901)
query : 1 - 901 (901/901)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 10, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000444111
(
DQ577580
)
(Non-protein coding transcript.)
genome : 120,330,668 - 120,330,696 (29)
query : 1 - 29 (29/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.935
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000439598_10
(
DQ573067
)
(Non-protein coding transcript.)
genome : 120,331,022 - 120,331,052 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000442318_09
(
DQ575787
)
(Non-protein coding transcript.)
genome : 120,331,149 - 120,331,179 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000442319_09
(
DQ575788
)
(Non-protein coding transcript.)
genome : 120,331,150 - 120,331,179 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000602235_04 (
ENST00000499986
)
(Hypothetical protein.)
genome : 120,331,216 - 120,350,670 (19,455)
query : 1 - 934 (934/934)
8 exons
identity = 0.963
3'(0.987;0.983;0.963;1.000;0.967;0.990;0.917;
0.938)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 8, cyto 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000450242_05
(
DQ583711
)
(Non-protein coding transcript.)
genome : 120,331,399 - 120,331,429 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000461590_05
(
DQ595059
)
(Non-protein coding transcript.)
genome : 120,331,401 - 120,331,430 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000441636_11
(
DQ575105
)
(Non-protein coding transcript.)
genome : 120,333,571 - 120,333,600 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0205251
HIT000442694_05
(
DQ576163
)
Representative transcript
(Non-protein coding transcript.)
genome : 120,339,333 - 120,339,363 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205251)
HIX0205259
HIT000449541_09
(
DQ583010
)
Representative transcript
(Non-protein coding transcript.)
genome : 120,341,427 - 120,341,458 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205259)
HIX0031765
HIT000444538_09
(
DQ578007
)
(Non-protein coding transcript.)
genome : 120,353,028 - 120,353,056 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0024626
HIT000043394
(
AK123521
)
Representative transcript
(General transcription factor II-I; GTFII-I; TFII-I;)
genome : 120,360,040 - 120,362,213 (2,174)
query : 3 - 2,180 (2,178/2,180)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 8, cyto_plas 8, cyto_golg 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024626)
HIX0031765
HIT000554481_03 (
ENST00000456547
)
(GTF2I-like repeat containing protein.)
genome : 120,361,716 - 120,371,312 (9,597)
query : 1 - 356 (356/356)
4 exons
identity = 0.978
3'(1.000;1.000;0.956;0.959)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0031765
HIT000264346
(
BC070391
)
(Conserved hypothetical protein.)
genome : 120,370,725 - 120,375,783 (5,059)
query : 1 - 939 (939/968)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, extr 8, mito 8, cyto_nucl 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031765)
HIX0024749
HIT000659920 (
NR_037630
)
(Conserved hypothetical protein.)
genome : 120,375,938 - 120,420,747 (44,810)
query : 1 - 1,048 (1,048/1,048)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 14, cyto_nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0024749
HIT000611639_02 (
ENST00000511950
)
(Hypothetical short protein.)
genome : 120,375,946 - 120,381,399 (5,454)
query : 1 - 605 (605/605)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 11, cyto 11, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0024749
HIT000609839 (
ENST00000510011
)
(Conserved hypothetical protein.)
genome : 120,375,975 - 120,419,058 (43,084)
query : 1 - 979 (979/979)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 14, cyto_nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0024749
HIT000608444 (
ENST00000508519
)
(Conserved hypothetical protein.)
genome : 120,375,994 - 120,414,592 (38,599)
query : 1 - 849 (849/849)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 14, cyto_nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0024749
HIT000604641_02 (
ENST00000504422
)
(Hypothetical short protein.)
genome : 120,375,994 - 120,379,393 (3,400)
query : 1 - 563 (563/563)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 11, cyto 11, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0024749
HIT000614696_02 (
ENST00000515251
)
(Hypothetical protein.)
genome : 120,376,051 - 120,382,938 (6,888)
query : 1 - 569 (569/569)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0205605
HIT000606976_03 (
ENST00000506942
)
(Hypothetical short protein.)
genome : 120,377,505 - 120,378,432 (928)
query : 1 - 573 (573/573)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 5, extr 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205605)
HIX0024749
HIT000611517_02 (
ENST00000511823
)
(Hypothetical protein.)
genome : 120,379,123 - 120,383,019 (3,897)
query : 1 - 336 (336/336)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0024749
HIT000612742_02 (
ENST00000513147
)
(Hypothetical protein.)
genome : 120,381,592 - 120,383,065 (1,474)
query : 1 - 585 (585/585)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 8, cyto_nucl 7.5, nucl 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0004471
HIT000024501
(
AL110237
)
Representative transcript
(Conserved hypothetical protein.)
genome : 120,400,704 - 120,402,089 (1,386)
query : 3 - 1,387 (1,385/1,406)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, mito 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004471)
HIX0024749
HIT000602054 (
ENST00000498873
)
(Hypothetical short protein.)
genome : 120,409,798 - 120,473,179 (63,382)
query : 1 - 981 (981/981)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7, cyto_nucl 6.66667, cyto 4,
cyto_pero 3.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0031341
HIT000198088 (
NM_001083
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,415,551 - 120,549,981 (134,431)
query : 1 - 6,988 (6,988/7,005)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 18, cyto 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000211344 (
NM_033437
)
(CGMP-specific 3',5'-cyclic phosphodiesterase isoform 3.)
genome : 120,415,551 - 120,549,239 (133,689)
query : 1 - 6,771 (6,771/6,788)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 14.8333, cyto_plas 11.8333,
nucl 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000211342 (
NM_033430
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,415,551 - 120,548,442 (132,892)
query : 1 - 6,819 (6,819/6,836)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_plas 13.5, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000309176 (
ENST00000354960
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,415,550 - 120,550,146 (134,597)
query : 1 - 7,154 (7,154/7,154)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 18, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000477850 (
ENST00000394439
)
(CGMP-specific 3',5'-cyclic phosphodiesterase isoform 3.)
genome : 120,415,552 - 120,549,202 (133,651)
query : 1 - 6,733 (6,733/6,733)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 14.8333, cyto_plas 11.8333,
nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0024749
HIT000610597 (
ENST00000510844
)
(Hypothetical short protein.)
genome : 120,415,581 - 120,440,721 (25,141)
query : 1 - 541 (541/541)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7.5, cyto_nucl 6.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0024749
HIT000606515 (
ENST00000506451
)
(Hypothetical short protein.)
genome : 120,415,620 - 120,419,182 (3,563)
query : 1 - 425 (425/425)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0024749
HIT000603091 (
ENST00000502760
)
(Conserved hypothetical protein.)
genome : 120,415,641 - 120,421,434 (5,794)
query : 1 - 850 (850/850)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 10, cyto_nucl 6.5, E.R._mito 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0031341
HIT000388825
(
BC126233
)
Representative transcript
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,416,083 - 120,549,915 (133,833)
query : 1 - 6,388 (6,388/6,388)
21 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 18, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : AB008468
Mus
sp. (Mouse) : AF541937
Danio
sp. (Zebrafish) : BC085414
Rattus
sp. (Rat) : D89093
Oryzias
sp. (Medaka) : ENSORLT00000009688
Pongo
sp. (Orangutan) : ENSPPYT00000017467
Tetraodon
sp. (Tetraodon) : GSTENT00011983001
Bos
sp. (Cow) : L16545
Takifugu
sp. (Fugu) : SINFRUT00000148562
Macaca
sp. (Macaque) : XM_001099652
Pan
sp. (Chimpanzee) : XM_001150967
Bos
sp. (Cow) : XM_001253229
Monodelphis
sp. (Opossum) : XM_001371554
Equus
sp. (Horse) : XM_001502305
Danio
sp. (Zebrafish) : XM_001921608
Gallus
sp. (Chicken) : XM_420631
HIX0031341
HIT000102036
(
D89094
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,418,479 - 120,550,146 (131,668)
query : 1 - 4,224 (4,224/4,415)
21 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.998;0.996)5'
coverage = 0.957
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 18, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000063766
(
AF043731
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,419,433 - 120,549,975 (130,543)
query : 7 - 3,106 (3,100/3,106)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.998;1.000)5'
coverage = 0.998
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 18, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000244007
(
AJ004865
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,419,434 - 120,549,919 (130,486)
query : 1 - 3,041 (3,041/3,041)
21 exons
identity = 0.995
3'(0.972;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.998;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 18, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000109446 (
ENST00000264805
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,419,696 - 120,548,788 (129,093)
query : 1 - 3,020 (3,020/3,020)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_plas 13.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000085652
(
AY264918
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,419,696 - 120,548,330 (128,635)
query : 1 - 2,562 (2,562/2,562)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.17
,
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_plas 13.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000422986
(
AK290189
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,419,703 - 120,549,862 (130,160)
query : 1 - 2,717 (2,717/2,717)
21 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;1.000;0.978;0.998;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 18, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000058446
(
AB015656
)
(CGMP-specific 3',5'-cyclic phosphodiesterase isoform 2.)
genome : 120,419,724 - 120,548,336 (128,613)
query : 1 - 2,540 (2,540/2,540)
21 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.998;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_plas 13.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000721317
(
JQ286346
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,419,756 - 120,549,826 (130,071)
query : 1 - 2,628 (2,628/2,628)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.998;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR002073 : 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
IPR003018 : GAF domain
IPR003607 : HD/PDEase domain
IPR023088 : 3'5'-cyclic nucleotide phosphodiesterase
IPR023174 : 3'5'-cyclic nucleotide phosphodiesterase, conserved site
IPR029016 : GAF domain-like
GO :
0003824 : Molecular Function : catalytic activity
0004114 : Molecular Function : 3',5'-cyclic-nucleotide phosphodiesterase activity
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 18, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000603702 (
ENST00000503412
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,421,978 - 120,440,254 (18,277)
query : 1 - 892 (892/892)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000612143 (
ENST00000512494
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,423,545 - 120,427,090 (3,546)
query : 1 - 411 (411/411)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 12.5, extr 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000609467 (
ENST00000509612
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,428,808 - 120,440,797 (11,990)
query : 1 - 738 (738/738)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 4, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0024749
HIT000066874
(
AF085995
)
(Hypothetical short protein.)
genome : 120,433,528 - 120,473,179 (39,652)
query : 1 - 452 (452/461)
5 exons
identity = 0.998
5'(1.000;0.991;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0024749
HIT000602335 (
ENST00000500559
)
(Hypothetical short protein.)
genome : 120,433,528 - 120,473,180 (39,653)
query : 1 - 453 (453/453)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0031341
HIT000613152 (
ENST00000513594
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,438,215 - 120,460,253 (22,039)
query : 1 - 572 (572/572)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.5, mito 7, nucl 3.5,
E.R._mito 3.5, mito_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000612105 (
ENST00000512450
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,440,234 - 120,448,431 (8,198)
query : 1 - 567 (567/567)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 15.3333, cyto_plas 13.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000612367 (
ENST00000512739
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,442,155 - 120,464,452 (22,298)
query : 1 - 648 (648/648)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto 5.5, cyto_nucl 4.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000603233 (
ENST00000502912
)
(Hypothetical short protein.)
genome : 120,459,936 - 120,463,157 (3,222)
query : 1 - 371 (371/371)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 10.5, extr 10, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0024749
HIT000044620
(
AK124747
)
(Conserved hypothetical protein.)
genome : 120,468,916 - 120,473,184 (4,269)
query : 1 - 4,266 (4,266/4,266)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 11, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0024749
HIT000095023
(
BC037908
)
Representative transcript
(Conserved hypothetical protein.)
genome : 120,469,361 - 120,473,179 (3,819)
query : 5 - 2,379 (2,375/2,414)
2 exons
identity = 0.998
5'(0.998;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0024749
HIT000603349 (
ENST00000503038
)
(Conserved hypothetical protein.)
genome : 120,469,361 - 120,473,180 (3,820)
query : 1 - 2,376 (2,376/2,376)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024749)
HIX0031341
HIT000608814 (
ENST00000508914
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,473,596 - 120,484,127 (10,532)
query : 1 - 514 (514/514)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 8.5, extr 8, mito 7, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000085660
(
AY266363
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,474,868 - 120,528,138 (53,271)
query : 1 - 767 (767/767)
7 exons
identity = 0.992
3'(0.971;0.985;1.000;0.989;1.000;1.000;0.989)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR003018 : GAF domain
IPR029016 : GAF domain-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 9, mito 7, nucl 6.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0164082
HIT000506430 (
ENST00000408318
)
(Non-protein coding transcript.)
genome : 120,490,854 - 120,490,980 (127)
query : 1 - 127 (127/127)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164082)
HIX0031341
HIT000518567 (
ENST00000420633
)
(CGMP-specific 3',5'-cyclic phosphodiesterase isoform 3.)
genome : 120,517,681 - 120,549,220 (31,540)
query : 1 - 747 (747/747)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, extr 10, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031341
HIT000063767
(
AF043732
)
(CGMP-specific 3',5'-cyclic phosphodiesterase isoform 2.)
genome : 120,528,053 - 120,548,788 (20,736)
query : 10 - 894 (885/894)
2 exons
identity = 0.998
3'(0.998;0.998)5'
coverage = 0.990
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR029016 : GAF domain-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 11, extr 10, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0120157
HIT000016169
(
AK091302
)
Representative transcript
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,548,945 - 120,551,908 (2,964)
query : 1 - 2,961 (2,961/2,961)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0120157)
HIX0031341
HIT000071938
(
AF155192
)
(cGMP-specific 3',5'-cyclic phosphodiesterase; EC=3.1.4.35; cGMP-binding cGMP-specific phosphodiesterase; CGB-PDE;)
genome : 120,549,675 - 120,549,940 (266)
query : 1 - 266 (266/283)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.940
EC number :
EC 3.1.4.35
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14.5, cyto 11.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031341)
HIX0031704
HIT000095345
(
BC038750
)
Representative transcript
(Hypothetical short protein.)
genome : 120,720,261 - 120,725,670 (5,410)
query : 1 - 533 (533/550)
5 exons
identity = 0.996
3'(1.000;0.992;1.000;1.000;0.984)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031704)
HIX0031704
HIT000603565 (
ENST00000503266
)
(Hypothetical short protein.)
genome : 120,720,244 - 120,725,670 (5,427)
query : 1 - 550 (550/550)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031704)
HIX0031704
HIT000611894 (
ENST00000512219
)
(Hypothetical short protein.)
genome : 120,720,251 - 120,725,655 (5,405)
query : 1 - 637 (637/637)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031704)
HIX0205551
HIT000605965 (
ENST00000505862
)
(Conserved hypothetical protein.)
genome : 120,858,712 - 120,885,053 (26,342)
query : 1 - 819 (819/819)
7 exons
identity = 0.991
5'(1.000;0.993;1.000;1.000;0.940;0.994;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11, nucl 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205551)
HIX0205551
HIT000605278 (
ENST00000505122
)
(Hypothetical short protein.)
genome : 120,860,695 - 120,885,376 (24,682)
query : 1 - 570 (570/570)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 6.5, cyto 5, nucl 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205551)
HIX0206119
HIT000618073 (
ENST00000518701
)
(Conserved hypothetical protein.)
genome : 120,956,188 - 120,961,770 (5,583)
query : 1 - 474 (474/474)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 6.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206119)
HIX0004473
HIT000264241
(
BC070283
)
(Mitotic spindle assembly checkpoint protein MAD2A; HsMAD2; Mitotic arrest deficient 2-like protein 1; MAD2-like protein 1;)
genome : 120,980,591 - 120,987,925 (7,335)
query : 1 - 1,336 (1,336/1,366)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR003511 : DNA-binding HORMA
IPR027097 : Mitotic spindle checkpoint protein Mad2
GO :
0007094 : Biological Process : mitotic spindle assembly checkpoint
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, cyto 10, extr 9, nucl 8, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004473)
HIX0004473
HIT000199258 (
NM_002358
)
(Mitotic spindle assembly checkpoint protein MAD2A; HsMAD2; Mitotic arrest deficient 2-like protein 1; MAD2-like protein 1;)
genome : 120,980,580 - 120,988,013 (7,434)
query : 1 - 1,435 (1,435/1,453)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 11, extr 10, nucl 6, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004473)
HIX0004473
HIT000029548
(
BC000356
)
Representative transcript
(Mitotic spindle assembly checkpoint protein MAD2A; HsMAD2; Mitotic arrest deficient 2-like protein 1; MAD2-like protein 1;)
genome : 120,980,580 - 120,987,963 (7,384)
query : 1 - 1,385 (1,385/1,403)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003511 : DNA-binding HORMA
IPR027097 : Mitotic spindle checkpoint protein Mad2
GO :
0007094 : Biological Process : mitotic spindle assembly checkpoint
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 11, extr 10, nucl 6, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004473)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168907
Rattus
sp. (Rat) : AF373713
Mus
sp. (Mouse) : AK160286
Danio
sp. (Zebrafish) : BC093212
Gallus
sp. (Chicken) : BX935088
Tetraodon
sp. (Tetraodon) : CR710659
Equus
sp. (Horse) : ENSECAT00000014216
Pongo
sp. (Orangutan) : ENSPPYT00000017468
Takifugu
sp. (Fugu) : SINFRUT00000148571
Monodelphis
sp. (Opossum) : XM_001371509
Pan
sp. (Chimpanzee) : XM_517581
Canis
sp. (Dog) : XM_533278
Canis
sp. (Dog) : XM_844571
HIX0004473
HIT000032544
(
BC005945
)
(Mitotic spindle assembly checkpoint protein MAD2A; HsMAD2; Mitotic arrest deficient 2-like protein 1; MAD2-like protein 1;)
genome : 120,980,591 - 120,987,956 (7,366)
query : 1 - 1,367 (1,367/1,391)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR003511 : DNA-binding HORMA
IPR027097 : Mitotic spindle checkpoint protein Mad2
GO :
0007094 : Biological Process : mitotic spindle assembly checkpoint
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 11, extr 10, nucl 6, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004473)
HIX0004473
HIT000219131
(
U31278
)
(Mitotic spindle assembly checkpoint protein MAD2A; HsMAD2; Mitotic arrest deficient 2-like protein 1; MAD2-like protein 1;)
genome : 120,980,591 - 120,987,963 (7,373)
query : 1 - 1,373 (1,373/1,390)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003511 : DNA-binding HORMA
IPR027097 : Mitotic spindle checkpoint protein Mad2
GO :
0007094 : Biological Process : mitotic spindle assembly checkpoint
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 11, extr 10, nucl 6, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004473)
HIX0004473
HIT000114528 (
ENST00000296509
)
(Mitotic spindle assembly checkpoint protein MAD2A; HsMAD2; Mitotic arrest deficient 2-like protein 1; MAD2-like protein 1;)
genome : 120,980,577 - 120,988,229 (7,653)
query : 1 - 1,654 (1,654/1,654)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 11, extr 10, nucl 6, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004473)
HIX0004473
HIT000243798
(
AJ000186
)
(Mitotic spindle assembly checkpoint protein MAD2A; HsMAD2; Mitotic arrest deficient 2-like protein 1; MAD2-like protein 1;)
genome : 120,980,577 - 120,987,955 (7,379)
query : 1 - 1,379 (1,379/1,379)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003511 : DNA-binding HORMA
IPR027097 : Mitotic spindle checkpoint protein Mad2
GO :
0007094 : Biological Process : mitotic spindle assembly checkpoint
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 11, extr 10, nucl 6, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004473)
HIX0004473
HIT000128144 (
ENST00000333047
)
(Mitotic spindle assembly checkpoint protein MAD2A; HsMAD2; Mitotic arrest deficient 2-like protein 1; MAD2-like protein 1;)
genome : 120,980,592 - 120,987,988 (7,397)
query : 1 - 1,277 (1,277/1,277)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8.5, nucl 6.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004473)
HIX0004473
HIT000492852
(
AK298228
)
(Mitotic spindle assembly checkpoint protein MAD2A; HsMAD2; Mitotic arrest deficient 2-like protein 1; MAD2-like protein 1;)
genome : 120,980,592 - 120,987,988 (7,397)
query : 1 - 1,277 (1,277/1,277)
4 exons
identity = 0.999
3'(1.000;0.990;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003511 : DNA-binding HORMA
IPR027097 : Mitotic spindle checkpoint protein Mad2
GO :
0007094 : Biological Process : mitotic spindle assembly checkpoint
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8.5, nucl 6.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004473)
HIX0004473
HIT000331213
(
AK223433
)
(Mitotic spindle assembly checkpoint protein MAD2A; HsMAD2; Mitotic arrest deficient 2-like protein 1; MAD2-like protein 1;)
genome : 120,980,925 - 120,987,974 (7,050)
query : 1 - 1,051 (1,051/1,051)
5 exons
identity = 0.998
3'(1.000;1.000;1.000;0.993;0.994)5'
coverage = 1.000
InterPro :
IPR003511 : DNA-binding HORMA
IPR027097 : Mitotic spindle checkpoint protein Mad2
GO :
0007094 : Biological Process : mitotic spindle assembly checkpoint
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 6, mito 5, extr 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004473)
HIX0004473
HIT000604891 (
ENST00000504707
)
(Mitotic spindle assembly checkpoint protein MAD2A; HsMAD2; Mitotic arrest deficient 2-like protein 1; MAD2-like protein 1;)
genome : 120,980,983 - 120,988,013 (7,031)
query : 1 - 764 (764/764)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, pero 8, mito 7, E.R. 2, golg 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004473)
HIX0004473
HIT000612134_01 (
ENST00000512484
)
(Mitotic spindle assembly checkpoint protein MAD2A; HsMAD2; Mitotic arrest deficient 2-like protein 1; MAD2-like protein 1;)
genome : 120,980,983 - 120,982,191 (1,209)
query : 1 - 626 (626/626)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11.5, extr 7, nucl 6.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004473)
HIX0004473
HIT000078885
(
AF394735
)
(Mitotic spindle assembly checkpoint protein MAD2A; HsMAD2; Mitotic arrest deficient 2-like protein 1; MAD2-like protein 1;)
genome : 120,981,255 - 120,987,906 (6,652)
query : 1 - 532 (532/532)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003511 : DNA-binding HORMA
IPR027097 : Mitotic spindle checkpoint protein Mad2
GO :
0007094 : Biological Process : mitotic spindle assembly checkpoint
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8.5, nucl 6.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004473)
HIX0004473
HIT000432693
(
AK313827
)
(Mitotic spindle assembly checkpoint protein MAD2A; HsMAD2; Mitotic arrest deficient 2-like protein 1; MAD2-like protein 1;)
genome : 120,981,273 - 120,987,975 (6,703)
query : 1 - 704 (704/704)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003511 : DNA-binding HORMA
IPR027097 : Mitotic spindle checkpoint protein Mad2
GO :
0007094 : Biological Process : mitotic spindle assembly checkpoint
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 11, extr 10, nucl 6, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004473)
HIX0004473
HIT000669480_01 (
ENST00000556153
)
(Mitotic spindle assembly checkpoint protein MAD2A; HsMAD2; Mitotic arrest deficient 2-like protein 1; MAD2-like protein 1;)
genome : 120,981,273 - 120,987,889 (6,617)
query : 1 - 618 (618/618)
5 exons
identity = 0.977
3'(0.983;0.971;0.983;0.980;0.959)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 11.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004473)
HIX0004473
HIT000611020 (
ENST00000511295
)
(Mitotic spindle assembly checkpoint protein MAD2A; HsMAD2; Mitotic arrest deficient 2-like protein 1; MAD2-like protein 1;)
genome : 120,986,606 - 120,987,976 (1,371)
query : 1 - 528 (528/528)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 7.5, cyto 6, nucl 5, cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004473)
HIX0205136
HIT000610804 (
ENST00000511064
)
(Conserved hypothetical protein.)
genome : 120,988,113 - 121,087,047 (98,935)
query : 1 - 573 (573/573)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205136)
HIX0205136
HIT000603384 (
ENST00000503073
)
(Conserved hypothetical protein.)
genome : 120,988,113 - 121,006,725 (18,613)
query : 1 - 2,330 (2,330/2,339)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205136)
HIX0205136
HIT000604350 (
ENST00000504106
)
(Hypothetical short protein.)
genome : 120,988,125 - 121,314,877 (326,753)
query : 1 - 529 (529/529)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205136)
HIX0205136
HIT000608294 (
ENST00000508362
)
(Conserved hypothetical protein.)
genome : 120,988,666 - 121,337,921 (349,256)
query : 1 - 558 (558/558)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto_nucl 7.5, nucl 6.5, cyto 5.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205136)
HIX0205815
HIT000610448 (
ENST00000510683
)
(Conserved hypothetical protein.)
genome : 121,012,201 - 121,013,437 (1,237)
query : 1 - 1,237 (1,237/1,237)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 8, cyto 8, mito 8, cyto_mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205815)
HIX0164174
HIT000531946 (
ENST00000434012
)
(Small GTPase superfamily, ARF/SAR type protein.)
genome : 121,263,211 - 121,263,802 (592)
query : 1 - 592 (592/592)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, extr 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164174)
HIX0164174
HIT000712335 (
ENST00000600592
)
(Small GTPase superfamily, ARF/SAR type protein.)
genome : 121,263,212 - 121,263,784 (573)
query : 1 - 573 (573/573)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, extr 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164174)
HIX0205157
HIT000606184 (
ENST00000506100
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 121,560,245 - 121,571,943 (11,699)
query : 1 - 544 (544/544)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 15.5, nucl 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205157)
HIX0205157
HIT000605678 (
ENST00000505556
)
(Endonuclease/exonuclease/phosphatase domain containing protein.)
genome : 121,560,264 - 121,571,951 (11,688)
query : 1 - 530 (530/530)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13.5, nucl 7.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205157)
HIX0216170
HIT000317379 (
NM_019050
)
(Inactive ubiquitin carboxyl-terminal hydrolase 53; Inactive ubiquitin-specific peptidase 53;)
genome : 120,133,782 - 120,216,673 (82,892)
query : 1 - 6,595 (6,595/6,612)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11.5, cyto 6.5, mito 6, extr 3,
golg 3, E.R._mito 3, mito_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216170)
HIX0216170
HIT000306513
(
CR749490
)
Representative transcript
(Inactive ubiquitin carboxyl-terminal hydrolase 53.)
genome : 120,133,791 - 120,215,791 (82,001)
query : 2 - 5,828 (5,827/5,849)
19 exons
identity = 0.998
5'(0.996;0.993;0.992;1.000;0.999;1.000;1.000;
1.000;1.000;0.991;0.993;0.993;1.000;0.994;
1.000;0.999;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 9.5, extr 7, mito 5, nucl 3.5,
extr_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216170)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK036876
Bos
sp. (Cow) : BC149007
Gallus
sp. (Chicken) : ENSGALT00000019558
Pongo
sp. (Orangutan) : ENSPPYT00000017463
Tetraodon
sp. (Tetraodon) : GSTENT00021349001
Tetraodon
sp. (Tetraodon) : GSTENT00023241001
Takifugu
sp. (Fugu) : SINFRUT00000149151
Takifugu
sp. (Fugu) : SINFRUT00000152651
Macaca
sp. (Macaque) : XM_001098826
Danio
sp. (Zebrafish) : XM_001331930
Monodelphis
sp. (Opossum) : XM_001371653
Equus
sp. (Horse) : XM_001916288
Rattus
sp. (Rat) : XM_215700
Pan
sp. (Chimpanzee) : XM_517410
Canis
sp. (Dog) : XM_545046
HIX0216170
HIT000111105 (
ENST00000274030
)
(Inactive ubiquitin carboxyl-terminal hydrolase 53; Inactive ubiquitin-specific peptidase 53;)
genome : 120,133,791 - 120,215,901 (82,111)
query : 1 - 5,936 (5,936/5,936)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11.5, cyto 6.5, mito 6, extr 3,
golg 3, E.R._mito 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216170)
HIX0216170
HIT000607582 (
ENST00000507597
)
(Conserved hypothetical protein.)
genome : 120,133,896 - 120,160,496 (26,601)
query : 1 - 503 (503/503)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216170)
AC107048.3
120000001-120057271 F +
NCBI
AC108164.5
120057272-120088896 F +
NCBI
AC092656.1
120088897-120278737 F -
NCBI
AC110373.4
120278738-120319749 F +
NCBI
AC093752.2
120319750-120448628 F +
NCBI
AC080089.5
120448629-120620651 F +
NCBI
AC125245.4
120620652-120756574 F +
NCBI
AC112227.4
120756575-120788763 F +
NCBI
AC115224.3
120788764-120850222 F +
NCBI
AC097173.1
120850223-121023851 F +
NCBI
AC025237.7
121023852-121085353 F +
NCBI
AC108866.5
121085354-121238169 F +
NCBI
AC073475.4
121238170-121394994 F +
NCBI
AC024094.28
121394995-121504121 F -
NCBI
AC025741.5
121504122-121600000 F +
NCBI