bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0004654
HIT000608904 (
ENST00000509012
)
(Hypothetical short protein.)
genome : 182,795,591 - 183,065,348 (269,758)
query : 1 - 564 (564/564)
5 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004654)
HIX0004654
HIT000012810
(
AK056196
)
(Conserved hypothetical protein.)
genome : 182,896,309 - 183,006,289 (109,981)
query : 1 - 2,129 (2,129/2,129)
5 exons
identity = 0.996
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12, extr 11, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004654)
HIX0004654
HIT000607839 (
ENST00000507869
)
(Conserved hypothetical protein.)
genome : 182,896,309 - 183,006,289 (109,981)
query : 1 - 2,129 (2,129/2,129)
5 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004654)
HIX0004654
HIT000605661 (
ENST00000505537
)
(Conserved hypothetical protein.)
genome : 183,000,782 - 183,006,237 (5,456)
query : 1 - 550 (550/550)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, mito 6.5, plas 4, E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004654)
HIX0004654
HIT000087743
(
BC011956
)
(Hypothetical short protein.)
genome : 183,060,158 - 183,061,595 (1,438)
query : 1 - 1,438 (1,438/1,454)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004654)
HIX0004654
HIT000563266 (
NR_027107
)
(Conserved hypothetical protein.)
genome : 183,060,159 - 183,065,668 (5,510)
query : 1 - 4,953 (4,953/4,953)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7.5, nucl 6, cyto_pero 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004654)
HIX0004654
HIT000019021
(
AK094166
)
(Hypothetical protein.)
genome : 183,060,162 - 183,062,627 (2,466)
query : 1 - 2,454 (2,454/2,454)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004654)
HIX0004654
HIT000613300 (
ENST00000513752
)
(Hypothetical short protein.)
genome : 183,062,339 - 183,065,653 (3,315)
query : 1 - 805 (805/805)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 8, mito 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004654)
HIX0004654
HIT000041824
(
BC033172
)
(Conserved hypothetical protein.)
genome : 183,062,806 - 183,064,563 (1,758)
query : 1 - 1,758 (1,758/1,775)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 7.5, extr_plas 7.5, nucl 6, cyto_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004654)
HIX0004654
HIT000120462 (
ENST00000315302
)
(Conserved hypothetical protein.)
genome : 183,062,803 - 183,065,619 (2,817)
query : 1 - 2,260 (2,260/2,260)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7.5, nucl 6, cyto_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004654)
HIX0004654
HIT000007574
(
AK024300
)
Representative transcript
(Conserved hypothetical protein.)
genome : 183,062,807 - 183,065,619 (2,813)
query : 1 - 2,256 (2,256/2,256)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7.5, nucl 6, cyto_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004654)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000017693
Pan
sp. (Chimpanzee) : XM_530768
Macaca
sp. (Macaque) : XR_011079
HIX0004654
HIT000605976 (
ENST00000505873
)
(Conserved hypothetical protein.)
genome : 183,063,536 - 183,064,929 (1,394)
query : 1 - 939 (939/939)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7.5, nucl 6, cyto_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004654)
HIX0004654
HIT000610793 (
ENST00000511052
)
(Hypothetical short protein.)
genome : 183,064,331 - 183,065,041 (711)
query : 1 - 554 (554/554)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 8, mito 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004654)
HIX0004654
HIT000608863 (
ENST00000508968
)
(Non-protein coding transcript.)
genome : 183,064,644 - 183,066,402 (1,759)
query : 1 - 587 (587/587)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004654)
HIX0004656
HIT000427355
(
AK308489
)
(Teneurin-3; Ten-3; Protein Odd Oz/ten-m homolog 3; Tenascin-M3; Ten-m3; Teneurin transmembrane protein 3;)
genome : 183,065,140 - 183,271,469 (206,330)
query : 1 - 1,239 (1,239/1,239)
4 exons
identity = 0.997
5'(1.000;1.000;1.000;0.992)3'
coverage = 1.000
InterPro :
IPR009471 : Teneurin intracellular, N-terminal
GO :
0007165 : Biological Process : signal transduction
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13, cyto 7.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004656)
HIX0004656
HIT000612792 (
ENST00000513201
)
(Teneurin-3; Ten-3; Protein Odd Oz/ten-m homolog 3; Tenascin-M3; Ten-m3; Teneurin transmembrane protein 3;)
genome : 183,065,140 - 183,271,469 (206,330)
query : 1 - 1,237 (1,237/1,237)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13, cyto 7.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004656)
HIX0205523
HIT000605526 (
ENST00000505389
)
(Non-protein coding transcript.)
genome : 183,066,005 - 183,111,535 (45,531)
query : 1 - 286 (286/286)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205523)
HIX0164080
HIT000506416 (
ENST00000408300
)
(Non-protein coding transcript.)
genome : 183,090,446 - 183,090,531 (86)
query : 1 - 86 (86/86)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164080)
HIX0164080
HIT000658556 (
NR_031640
)
(Non-protein coding transcript.)
genome : 183,090,446 - 183,090,531 (86)
query : 1 - 86 (86/86)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164080)
HIX0031564
HIT000067529
(
AF087981
)
Representative transcript
(Hypothetical short protein.)
genome : 183,150,980 - 183,151,281 (302)
query : 1 - 302 (302/313)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031564)
HIX0004656
HIT000073644
(
AF195420
)
(Teneurin-3; Ten-3; Protein Odd Oz/ten-m homolog 3; Tenascin-M3; Ten-m3; Teneurin transmembrane protein 3;)
genome : 183,164,581 - 183,594,372 (429,792)
query : 27 - 1,476 (1,450/1,476)
7 exons
identity = 0.997
5'(0.980;1.000;1.000;1.000;1.000;1.000;0.986)3'
coverage = 0.982
InterPro :
IPR009471 : Teneurin intracellular, N-terminal
GO :
0007165 : Biological Process : signal transduction
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, cyto 7, extr_plas 6, nucl 5, cyto_mito 5,
pero 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004656)
HIX0004656
HIT000612130 (
ENST00000512480
)
(Teneurin-3; Ten-3; Protein Odd Oz/ten-m homolog 3; Tenascin-M3; Ten-m3; Teneurin transmembrane protein 3;)
genome : 183,245,098 - 183,268,082 (22,985)
query : 65 - 651 (587/651)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.902
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13, cyto 7.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004656)
HIX0004656
HIT000714821
(
HE578285
)
(Teneurin-3; Ten-3; Protein Odd Oz/ten-m homolog 3; Tenascin-M3; Ten-m3; Teneurin transmembrane protein 3;)
genome : 183,245,174 - 183,549,969 (304,796)
query : 1 - 636 (636/636)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009471 : Teneurin intracellular, N-terminal
GO :
0007165 : Biological Process : signal transduction
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 16.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004656)
HIX0004656
HIT000714820
(
HE578284
)
(Teneurin-3; Ten-3; Protein Odd Oz/ten-m homolog 3; Tenascin-M3; Ten-m3; Teneurin transmembrane protein 3;)
genome : 183,245,174 - 183,549,935 (304,762)
query : 1 - 881 (881/881)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009471 : Teneurin intracellular, N-terminal
GO :
0007165 : Biological Process : signal transduction
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 17, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004656)
HIX0004656
HIT000610290 (
ENST00000510504
)
(Teneurin-3; Ten-3; Protein Odd Oz/ten-m homolog 3; Tenascin-M3; Ten-m3; Teneurin transmembrane protein 3;)
genome : 183,370,152 - 183,550,028 (179,877)
query : 1 - 548 (548/548)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr_plas 9.5, plas 9, extr 8, mito 6, nucl 4,
E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004656)
HIX0004655
HIT000005298
(
AK022024
)
Representative transcript
(Conserved hypothetical protein.)
genome : 183,452,177 - 183,454,691 (2,515)
query : 1 - 2,515 (2,515/2,515)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.5, extr 7, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004655)
HIX0206104
HIT000615937 (
ENST00000516534
)
(Non-protein coding transcript.)
genome : 183,469,812 - 183,469,932 (121)
query : 1 - 121 (121/121)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206104)
HIX0004656
HIT000001170
(
AB040888
)
Representative transcript
(Teneurin-3; Ten-3; Protein Odd Oz/ten-m homolog 3; Tenascin-M3; Ten-m3; Teneurin transmembrane protein 3;)
genome : 183,549,802 - 183,721,832 (172,031)
query : 18 - 7,698 (7,681/7,698)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.996;1.000;1.000;
0.996;1.000;1.000;1.000;1.000;1.000;1.000;
0.999;1.000;1.000)3'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, mito 4, nucl 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004656)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB025412
Danio
sp. (Zebrafish) : AB026979
Macaca
sp. (Macaque) : AB174118
Gallus
sp. (Chicken) : CR407036
Bos
sp. (Cow) : ENSBTAT00000028165
Oryzias
sp. (Medaka) : ENSORLT00000002695
Tetraodon
sp. (Tetraodon) : GSTENT00009650001
Tetraodon
sp. (Tetraodon) : GSTENT00024409001
Takifugu
sp. (Fugu) : SINFRUT00000173857
Takifugu
sp. (Fugu) : SINFRUT00000178282
Pan
sp. (Chimpanzee) : XM_001160378
Monodelphis
sp. (Opossum) : XM_001364613
Equus
sp. (Horse) : XM_001492414
Rattus
sp. (Rat) : XM_224841
Canis
sp. (Dog) : XM_852690
HIX0206086
HIT000615308 (
ENST00000515905
)
(Hypothetical short protein.)
genome : 183,552,607 - 183,552,841 (235)
query : 1 - 235 (235/235)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206086)
HIX0004656
HIT000045742
(
AK125869
)
(Teneurin-3; Ten-3; Protein Odd Oz/ten-m homolog 3; Tenascin-M3; Ten-m3; Teneurin transmembrane protein 3;)
genome : 183,601,477 - 183,676,506 (75,030)
query : 1 - 3,394 (3,394/3,394)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996;1.000;1.000;0.996;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR008969 : Carboxypeptidase-like, regulatory domain
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR013032 : EGF-like, conserved site
IPR027689 : Teneurin-3
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14.5, cyto 9.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004656)
HIX0004656
HIT000603269 (
ENST00000502950
)
(Teneurin-3; Ten-3; Protein Odd Oz/ten-m homolog 3; Tenascin-M3; Ten-m3; Teneurin transmembrane protein 3;)
genome : 183,601,477 - 183,676,506 (75,030)
query : 1 - 3,394 (3,394/3,394)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14.5, cyto 9.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004656)
HIX0004656
HIT000607715 (
ENST00000507737
)
(Teneurin-3; Ten-3; Protein Odd Oz/ten-m homolog 3; Tenascin-M3; Ten-m3; Teneurin transmembrane protein 3;)
genome : 183,601,525 - 183,603,069 (1,545)
query : 1 - 469 (469/469)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004656)
HIX0205746
HIT000609157 (
ENST00000509283
)
(Hypothetical short protein.)
genome : 183,619,055 - 183,629,195 (10,141)
query : 1 - 518 (518/518)
2 exons
identity = 0.992
3'(1.000;0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205746)
HIX0004656
HIT000003810
(
AK001336
)
(Teneurin-3; Ten-3; Protein Odd Oz/ten-m homolog 3; Tenascin-M3; Ten-m3; Teneurin transmembrane protein 3;)
genome : 183,676,335 - 183,721,832 (45,498)
query : 1 - 3,614 (3,614/3,614)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 13, nucl 10, cysk 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004656)
HIX0205938
HIT000612841 (
ENST00000513255
)
(Conserved hypothetical protein.)
genome : 183,693,718 - 183,695,084 (1,367)
query : 1 - 444 (444/444)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 4.5, cyto_nucl 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205938)
HIX0004656
HIT000004222
(
AK001748
)
(Teneurin-3; Ten-3; Protein Odd Oz/ten-m homolog 3; Tenascin-M3; Ten-m3; Teneurin transmembrane protein 3;)
genome : 183,696,161 - 183,721,832 (25,672)
query : 1 - 3,270 (3,270/3,270)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 9, cysk 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004656)
HIX0004656
HIT000010745
(
AK027473
)
(Teneurin-3; Ten-3; Protein Odd Oz/ten-m homolog 3; Tenascin-M3; Ten-m3; Teneurin transmembrane protein 3;)
genome : 183,714,014 - 183,721,749 (7,736)
query : 1 - 2,157 (2,157/2,157)
3 exons
identity = 1.000
5'(0.999;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR022385 : Rhs repeat-associated core
IPR027689 : Teneurin-3
IPR028916 : Tox-GHH domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 26, cyto 4.5, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004656)
HIX0216023
HIT000257386
(
AY726602
)
Representative transcript
(Hypothetical short protein.)
genome : 183,723,276 - 183,724,162 (887)
query : 1 - 887 (887/887)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216023)
HIX0004657
HIT000266191
(
BC088357
)
Representative transcript
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,811,257 - 183,838,521 (27,265)
query : 1 - 1,920 (1,920/1,993)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR002125 : CMP/dCMP deaminase, zinc-binding
IPR015517 : Deoxycytidylate deaminase-related
IPR016192 : APOBEC/CMP deaminase, zinc-binding
IPR016193 : Cytidine deaminase-like
GO :
0003824 : Molecular Function : catalytic activity
0008270 : Molecular Function : zinc ion binding
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 12, cyto_nucl 8.5, mito 2, E.R. 2,
E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720410
Mus
sp. (Mouse) : AK077663
Rattus
sp. (Rat) : BC087138
Danio
sp. (Zebrafish) : BC092809
Bos
sp. (Cow) : BC149761
Pongo
sp. (Orangutan) : CR858411
Equus
sp. (Horse) : ENSECAT00000018587
Oryzias
sp. (Medaka) : ENSORLT00000002647
Tetraodon
sp. (Tetraodon) : GSTENT00019988001
Takifugu
sp. (Fugu) : SINFRUT00000135165
Macaca
sp. (Macaque) : XM_001092239
Pan
sp. (Chimpanzee) : XM_001160760
Monodelphis
sp. (Opossum) : XM_001370176
Canis
sp. (Dog) : XM_843934
HIX0004657
HIT000602385 (
ENST00000500813
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,811,213 - 183,838,522 (27,310)
query : 1 - 1,829 (1,829/1,829)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 12, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000198851 (
NM_001921
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,811,244 - 183,838,630 (27,387)
query : 1 - 2,019 (2,019/2,019)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10.5, cyto_nucl 7.5, nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000365173 (
NM_001012732
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,811,244 - 183,838,630 (27,387)
query : 1 - 2,042 (2,042/2,042)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 12, cyto_nucl 8.5, mito 2, E.R. 2,
E.R._mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000310970 (
ENST00000357067
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,811,257 - 183,838,532 (27,276)
query : 1 - 1,931 (1,931/1,931)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 12, cyto_nucl 8.5, mito 2, E.R. 2,
E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000192145
(
L12136
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,811,258 - 183,836,721 (25,464)
query : 1 - 1,831 (1,831/1,831)
5 exons
identity = 0.998
3'(0.999;0.990;0.991;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR002125 : CMP/dCMP deaminase, zinc-binding
IPR015517 : Deoxycytidylate deaminase-related
IPR016192 : APOBEC/CMP deaminase, zinc-binding
IPR016193 : Cytidine deaminase-like
GO :
0003824 : Molecular Function : catalytic activity
0008270 : Molecular Function : zinc ion binding
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9.5, cyto_nucl 7, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000030292
(
BC001286
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,811,413 - 183,838,505 (27,093)
query : 1 - 1,725 (1,725/1,760)
6 exons
identity = 0.998
3'(0.999;1.000;0.983;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR002125 : CMP/dCMP deaminase, zinc-binding
IPR015517 : Deoxycytidylate deaminase-related
IPR016192 : APOBEC/CMP deaminase, zinc-binding
IPR016193 : Cytidine deaminase-like
GO :
0003824 : Molecular Function : catalytic activity
0008270 : Molecular Function : zinc ion binding
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 12.5, cyto_nucl 8.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000536254 (
ENST00000438320
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,811,408 - 183,838,747 (27,340)
query : 1 - 1,972 (1,972/1,972)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10.5, cyto_nucl 7.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000607531 (
ENST00000507543
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,811,408 - 183,838,514 (27,107)
query : 1 - 1,874 (1,874/1,874)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10.5, cyto_nucl 7.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000429654
(
AK310788
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,812,167 - 183,838,549 (26,383)
query : 1 - 879 (879/879)
5 exons
identity = 0.999
3'(1.000;0.990;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR015517 : Deoxycytidylate deaminase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000607614 (
ENST00000507631
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,812,167 - 183,838,549 (26,383)
query : 1 - 879 (879/879)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000487759
(
AK293135
)
(Deoxycytidylate deaminase isoform a.)
genome : 183,812,278 - 183,838,522 (26,245)
query : 1 - 764 (764/764)
5 exons
identity = 0.997
3'(0.997;1.000;0.991;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR015517 : Deoxycytidylate deaminase-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7, cyto 6.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000610172 (
ENST00000510370
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,812,525 - 183,838,542 (26,018)
query : 1 - 794 (794/794)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10.5, cyto_nucl 7.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000432087
(
AK313221
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,812,552 - 183,838,532 (25,981)
query : 1 - 636 (636/636)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR002125 : CMP/dCMP deaminase, zinc-binding
IPR015517 : Deoxycytidylate deaminase-related
IPR016192 : APOBEC/CMP deaminase, zinc-binding
IPR016193 : Cytidine deaminase-like
GO :
0003824 : Molecular Function : catalytic activity
0008270 : Molecular Function : zinc ion binding
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 12, cyto_nucl 8.5, mito 2, E.R. 2,
E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000603488 (
ENST00000503182
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,812,582 - 183,839,089 (26,508)
query : 1 - 578 (578/578)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 13, cyto_nucl 9, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000610112 (
ENST00000510307
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,815,642 - 183,838,049 (22,408)
query : 1 - 592 (592/592)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000612391 (
ENST00000512766
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,815,646 - 183,838,630 (22,985)
query : 1 - 683 (683/683)
5 exons
identity = 0.990
3'(1.000;1.000;1.000;0.947;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9.5, extr_plas 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000614226 (
ENST00000514754
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,815,707 - 183,837,780 (22,074)
query : 1 - 645 (645/645)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7.5, cyto_nucl 6, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000612957 (
ENST00000513383
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,832,376 - 183,836,713 (4,338)
query : 1 - 517 (517/517)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 13, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000612926 (
ENST00000513348
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,836,076 - 183,838,498 (2,423)
query : 1 - 615 (615/615)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6.5, cyto_nucl 5.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000604085 (
ENST00000503820
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,836,099 - 183,838,372 (2,274)
query : 1 - 896 (896/896)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto_nucl 5, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000609605 (
ENST00000509757
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,836,136 - 183,838,530 (2,395)
query : 1 - 564 (564/564)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto_nucl 5, nucl 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000609096 (
ENST00000509218
)
(Deoxycytidylate deaminase; EC=3.5.4.12; dCMP deaminase;)
genome : 183,836,141 - 183,838,531 (2,391)
query : 1 - 568 (568/568)
5 exons
identity = 0.988
3'(1.000;1.000;0.947;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.4.12
KEGG pathway :
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000604241 (
ENST00000503988
)
(Conserved hypothetical protein.)
genome : 183,836,143 - 183,838,406 (2,264)
query : 1 - 1,027 (1,027/1,027)
4 exons
identity = 0.996
3'(1.000;1.000;0.985;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0004657
HIT000608886 (
ENST00000508994
)
(Non-protein coding transcript.)
genome : 183,836,651 - 183,838,596 (1,946)
query : 1 - 332 (332/332)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004657)
HIX0205594
HIT000606734 (
ENST00000506678
)
(Survival motor neuron domain containing protein.)
genome : 183,949,754 - 183,950,873 (1,120)
query : 1 - 823 (823/823)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205594)
HIX0024596
HIT000259996
(
BC059396
)
Representative transcript
(Protein FAM92A1;)
genome : 183,958,818 - 183,961,272 (2,455)
query : 1 - 2,455 (2,455/2,496)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
InterPro :
IPR009602 : FAM92 protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024596)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC078261
Monodelphis
sp. (Opossum) : ENSMODT00000028484
Monodelphis
sp. (Opossum) : ENSMODT00000038964
Macaca
sp. (Macaque) : XR_011641
Pan
sp. (Chimpanzee) : XR_020963
HIX0024596
HIT000486351 (
NR_003612
)
(Protein FAM92A1;)
genome : 183,958,818 - 183,961,272 (2,455)
query : 1 - 2,455 (2,455/2,475)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024596)
HIX0024596
HIT000602672 (
ENST00000502308
)
(Protein FAM92A1;)
genome : 183,958,818 - 183,961,272 (2,455)
query : 1 - 2,455 (2,455/2,455)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 18, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024596)
HIX0024596
HIT000098704
(
BC047622
)
(Protein FAM92A1;)
genome : 183,958,818 - 183,960,595 (1,778)
query : 1 - 1,778 (1,778/1,793)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR009602 : FAM92 protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 18, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024596)
HIX0024596
HIT000334993
(
BC094692
)
(Protein FAM92A1;)
genome : 183,958,853 - 183,960,436 (1,584)
query : 1 - 1,583 (1,583/1,610)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR009602 : FAM92 protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024596)
HIX0024596
HIT000050761
(
BC022019
)
(Protein FAM92A1;)
genome : 183,958,860 - 183,961,126 (2,267)
query : 6 - 2,272 (2,267/2,287)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.997
InterPro :
IPR009602 : FAM92 protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024596)
HIX0024596
HIT000604944 (
ENST00000504766
)
(FAM92 protein family protein.)
genome : 183,958,920 - 183,960,291 (1,372)
query : 1 - 877 (877/877)
2 exons
identity = 0.994
5'(1.000;0.989)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024596)
HIX0004659
HIT000690331 (
ENST00000578387
)
(Conserved hypothetical protein.)
genome : 184,018,170 - 184,020,352 (2,183)
query : 1 - 2,183 (2,183/2,183)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 15, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004659)
HIX0004659
HIT000011453
(
AK054839
)
Representative transcript
(Conserved hypothetical protein.)
genome : 184,018,174 - 184,020,352 (2,179)
query : 1 - 2,179 (2,179/2,179)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 15, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004659)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000030877
HIX0004659
HIT000562276 (
NR_024008
)
(Conserved hypothetical protein.)
genome : 184,018,174 - 184,020,352 (2,179)
query : 1 - 2,179 (2,179/2,179)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 15, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004659)
HIX0004659
HIT000606477 (
ENST00000506413
)
(Conserved hypothetical protein.)
genome : 184,018,188 - 184,020,352 (2,165)
query : 1 - 2,165 (2,165/2,165)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 15, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004659)
HIX0004659
HIT000067079
(
AF086200
)
(Hypothetical protein.)
genome : 184,018,610 - 184,019,183 (574)
query : 1 - 574 (574/574)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 9.5, cyto_nucl 8.83333, cyto 5,
cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004659)
HIX0004659
HIT000389069
(
BC126477
)
(Conserved hypothetical protein.)
genome : 184,018,689 - 184,019,898 (1,210)
query : 1 - 1,210 (1,210/1,210)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 15, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004659)
HIX0004659
HIT000389071
(
BC126479
)
(Conserved hypothetical protein.)
genome : 184,018,689 - 184,019,898 (1,210)
query : 1 - 1,210 (1,210/1,210)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 15, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004659)
HIX0215942
HIT000360205 (
ENST00000378925
)
(WW domain containing protein.)
genome : 184,020,463 - 184,190,649 (170,187)
query : 1 - 2,615 (2,615/2,615)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215942)
HIX0215942
HIT000608536 (
ENST00000508614
)
(WW domain containing protein.)
genome : 184,020,492 - 184,166,698 (146,207)
query : 1 - 604 (604/604)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 16, cyto 10, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215942)
HIX0215942
HIT000617380_01 (
ENST00000517993
)
(WW domain containing protein.)
genome : 184,114,752 - 184,114,861 (110)
query : 1 - 110 (110/110)
1 exon
identity = 0.973
5'(0.973)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cysk 8, cyto 6.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215942)
HIX0020316
HIT000003556
(
AK001082
)
Representative transcript
(Conserved hypothetical protein.)
genome : 184,137,600 - 184,138,740 (1,141)
query : 1 - 1,140 (1,140/1,140)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, mito 8, extr_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020316)
HIX0024748
HIT000054734
(
BX537950
)
Representative transcript
(Non-protein coding transcript.)
genome : 184,154,782 - 184,161,787 (7,006)
query : 2 - 404 (403/458)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024748)
HIX0024748
HIT000611540 (
ENST00000511846
)
(Non-protein coding transcript.)
genome : 184,154,781 - 184,161,787 (7,007)
query : 1 - 404 (404/404)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024748)
HIX0215942
HIT000338816
(
BC107683
)
Representative transcript
(C2 domain containing protein.)
genome : 184,180,817 - 184,202,002 (21,186)
query : 1 - 1,415 (1,415/1,429)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215942)
HIX0215942
HIT000606301 (
ENST00000506225
)
(C2 domain containing protein.)
genome : 184,187,022 - 184,191,191 (4,170)
query : 1 - 553 (553/553)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215942)
HIX0215942
HIT000614727 (
ENST00000515284
)
(Conserved hypothetical protein.)
genome : 184,192,365 - 184,202,539 (10,175)
query : 1 - 641 (641/641)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 3, cyto 3, mito 3, cyto_nucl 3,
cyto_mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215942)
HIX0215847
HIT000038209
(
BC017957
)
Representative transcript
(Conserved hypothetical protein.)
genome : 184,203,760 - 184,237,078 (33,319)
query : 1 - 1,192 (1,192/1,220)
6 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, mito_pero 12, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215847)
HIX0215847
HIT000608658 (
ENST00000508747
)
(Conserved hypothetical protein.)
genome : 184,203,760 - 184,237,102 (33,343)
query : 1 - 1,216 (1,216/1,216)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, mito_pero 12, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215847)
HIX0215847
HIT000008956
(
AK025682
)
(Conserved hypothetical protein.)
genome : 184,205,384 - 184,238,325 (32,942)
query : 1 - 2,135 (2,135/2,153)
5 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14, nucl 8.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215847)
HIX0215847
HIT000384453
(
AK225323
)
(Conserved hypothetical protein.)
genome : 184,205,384 - 184,238,325 (32,942)
query : 1 - 2,135 (2,135/2,153)
5 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14, nucl 8.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215847)
HIX0215847
HIT000027336
(
AL832424
)
(Conserved hypothetical protein.)
genome : 184,210,598 - 184,241,928 (31,331)
query : 1 - 5,433 (5,433/5,448)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 13, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215847)
HIX0004661
HIT000123445 (
ENST00000323319
)
(Claudin-22.)
genome : 184,239,220 - 184,241,927 (2,708)
query : 1 - 2,708 (2,708/2,708)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004661)
HIX0004661
HIT000485858 (
NM_001111319
)
(Claudin-22.)
genome : 184,239,220 - 184,241,927 (2,708)
query : 1 - 2,708 (2,708/2,708)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004661)
HIX0004661
HIT000022918
(
AK098064
)
(Claudin-22.)
genome : 184,239,220 - 184,241,321 (2,102)
query : 1 - 2,103 (2,103/2,103)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR006187 : Claudin
IPR017974 : Claudin, conserved site
GO :
0005198 : Molecular Function : structural molecule activity
0005923 : Cellular Component : tight junction
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004661)
HIX0004661
HIT000016268
(
AK091401
)
Representative transcript
(Claudin-22.)
genome : 184,239,347 - 184,241,927 (2,581)
query : 1 - 2,581 (2,581/2,581)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
IPR006187 : Claudin
IPR017974 : Claudin, conserved site
GO :
0005198 : Molecular Function : structural molecule activity
0005923 : Cellular Component : tight junction
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004661)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK008821
Gallus
sp. (Chicken) : ENSGALT00000032210
Pongo
sp. (Orangutan) : ENSPPYT00000017698
Tetraodon
sp. (Tetraodon) : GSTENT00037698001
Danio
sp. (Zebrafish) : NM_001122706
Rattus
sp. (Rat) : XM_001059255
Macaca
sp. (Macaque) : XM_001092698
Pan
sp. (Chimpanzee) : XM_001160888
Monodelphis
sp. (Opossum) : XM_001370123
Equus
sp. (Horse) : XM_001491725
Canis
sp. (Dog) : XM_540034
Bos
sp. (Cow) : XM_867997
HIX0205205
HIT000640859 (
ENST00000541814
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 184,242,917 - 184,243,579 (663)
query : 1 - 663 (663/663)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205205)
HIX0205205
HIT000655579 (
NM_001185149
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 184,242,917 - 184,243,579 (663)
query : 1 - 663 (663/663)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205205)
HIX0205205
HIT000613962 (
ENST00000514470
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 184,242,965 - 184,243,561 (597)
query : 1 - 597 (597/597)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205205)
HIX0205222
eHIT000017534 ( ESTsASS_4_453 )
Representative transcript
(Non-protein coding transcript.)
genome : 184,252,859 - 184,270,931 (18,073)
query : 1 - 469 (469/469)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205222)
ESTs used for assembly :
BF511947 Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_526745
HIX0206037
HIT000614375 (
ENST00000514910
)
(Rho GTPase-activating protein domain containing protein.)
genome : 184,301,498 - 184,302,858 (1,361)
query : 1 - 1,361 (1,361/1,361)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15.6667, cyto_plas 10.3333,
nucl 7.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206037)
HIX0205793
HIT000610105 (
ENST00000510299
)
(Conserved hypothetical protein.)
genome : 184,340,043 - 184,340,958 (916)
query : 1 - 916 (916/916)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205793)
HIX0004662
HIT000604408 (
ENST00000504169
)
(CDKN2A-interacting protein; Collaborator of ARF;)
genome : 184,365,744 - 184,369,351 (3,608)
query : 1 - 2,721 (2,721/2,721)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004662)
HIX0004662
HIT000116135 (
ENST00000302350
)
(CDKN2A-interacting protein; Collaborator of ARF;)
genome : 184,365,788 - 184,369,351 (3,564)
query : 1 - 2,646 (2,646/2,646)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 15, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004662)
HIX0004662
HIT000002518
(
AK000043
)
Representative transcript
(CDKN2A-interacting protein; Collaborator of ARF;)
genome : 184,365,789 - 184,369,049 (3,261)
query : 1 - 2,374 (2,374/2,392)
3 exons
identity = 1.000
5'(1.000;1.000;0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004662)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK078329
Rattus
sp. (Rat) : BC098694
Bos
sp. (Cow) : BC114068
Oryzias
sp. (Medaka) : ENSORLT00000000155
Pongo
sp. (Orangutan) : ENSPPYT00000017701
Macaca
sp. (Macaque) : XM_001093046
Pan
sp. (Chimpanzee) : XM_001160971
Monodelphis
sp. (Opossum) : XM_001369980
Canis
sp. (Dog) : XM_844869
Equus
sp. (Horse) : XR_044567
HIX0004662
HIT000206514 (
NM_017632
)
(CDKN2A-interacting protein; Collaborator of ARF;)
genome : 184,365,789 - 184,369,049 (3,261)
query : 1 - 2,374 (2,374/2,391)
3 exons
identity = 1.000
5'(1.000;1.000;0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004662)
HIX0004662
HIT000074935
(
AF246705
)
(CDKN2A-interacting protein; Collaborator of ARF;)
genome : 184,365,800 - 184,369,347 (3,548)
query : 1 - 2,665 (2,665/2,686)
3 exons
identity = 0.998
5'(0.988;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR014720 : Double-stranded RNA-binding domain
IPR021859 : Protein of unknown function DUF3469
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004662)
HIX0004662
HIT000610675 (
ENST00000510928
)
(CDKN2A-interacting protein; Collaborator of ARF;)
genome : 184,365,850 - 184,367,174 (1,325)
query : 1 - 860 (860/860)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, nucl 17.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004662)
HIX0004662
HIT000021035
(
AK096180
)
(CDKN2A-interacting protein; Collaborator of ARF;)
genome : 184,365,877 - 184,369,346 (3,470)
query : 1 - 2,549 (2,549/2,549)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR021859 : Protein of unknown function DUF3469
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 15, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004662)
HIX0004662
HIT000039440
(
BC022270
)
(CDKN2A-interacting protein; Collaborator of ARF;)
genome : 184,365,907 - 184,369,347 (3,441)
query : 1 - 2,549 (2,549/2,578)
3 exons
identity = 0.998
5'(1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR014720 : Double-stranded RNA-binding domain
IPR021859 : Protein of unknown function DUF3469
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004662)
HIX0004662
HIT000384978
(
AK225848
)
(CDKN2A-interacting protein; Collaborator of ARF;)
genome : 184,365,931 - 184,368,916 (2,986)
query : 1 - 2,096 (2,096/2,096)
3 exons
identity = 0.999
5'(1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR014720 : Double-stranded RNA-binding domain
IPR021859 : Protein of unknown function DUF3469
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004662)
HIX0004662
HIT000606875 (
ENST00000506835
)
(CDKN2A-interacting protein; Collaborator of ARF;)
genome : 184,366,329 - 184,367,912 (1,584)
query : 1 - 888 (888/888)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004662)
HIX0004662
HIT000054944
(
BX538162
)
(CDKN2A-interacting protein; Collaborator of ARF;)
genome : 184,366,705 - 184,369,344 (2,640)
query : 1 - 2,184 (2,184/2,203)
2 exons
identity = 0.997
5'(1.000;0.997)3'
coverage = 1.000
InterPro :
IPR014720 : Double-stranded RNA-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 19, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004662)
HIX0004662
HIT000603243 (
ENST00000502924
)
(CDKN2A-interacting protein; Collaborator of ARF;)
genome : 184,367,294 - 184,369,082 (1,789)
query : 1 - 347 (347/347)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12.5, cyto_nucl 9, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004662)
HIX0120009
HIT000477573 (
ENST00000394154
)
(Vesicle transport v-SNARE, N-terminal domain containing protein.)
genome : 184,404,643 - 184,405,338 (696)
query : 1 - 696 (696/696)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, mito 7, pero 7, mito_pero 7, cyto_golg 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0120009)
HIX0031701
HIT000095272
(
BC038563
)
Representative transcript
(Hypothetical short protein.)
genome : 184,415,890 - 184,425,668 (9,779)
query : 1 - 781 (781/810)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031701)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000059987
HIX0031701
HIT000659151 (
NR_033995
)
(Hypothetical short protein.)
genome : 184,415,890 - 184,425,668 (9,779)
query : 1 - 781 (781/794)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031701)
HIX0031701
HIT000555237 (
ENST00000457303
)
(Hypothetical short protein.)
genome : 184,416,091 - 184,425,647 (9,557)
query : 1 - 559 (559/559)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031701)
HIX0004663
HIT000116125 (
ENST00000302327
)
(Inhibitor of growth protein 2; Inhibitor of growth 1-like protein; ING1Lp; p32; p33ING2;)
genome : 184,426,147 - 184,432,249 (6,103)
query : 1 - 1,189 (1,189/1,189)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004663)
HIX0004663
HIT000432866
(
AK314000
)
(Inhibitor of growth protein 2; Inhibitor of growth 1-like protein; ING1Lp; p32; p33ING2;)
genome : 184,426,203 - 184,432,105 (5,903)
query : 1 - 990 (990/990)
2 exons
identity = 0.996
5'(0.991;0.999)3'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
IPR024610 : Inhibitor of growth protein, N-terminal
IPR028639 : Inhibitor of growth protein 2
IPR028651 : ING family
GO :
0003682 : Molecular Function : chromatin binding
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0008270 : Molecular Function : zinc ion binding
0008285 : Biological Process : negative regulation of cell proliferation
0016568 : Biological Process : chromatin modification
0043065 : Biological Process : positive regulation of apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004663)
HIX0004663
HIT000198534 (
NM_001564
)
(Inhibitor of growth protein 2; Inhibitor of growth 1-like protein; ING1Lp; p32; p33ING2;)
genome : 184,426,220 - 184,432,249 (6,030)
query : 1 - 1,116 (1,116/1,135)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004663)
HIX0004663
HIT000040952
(
BC030128
)
Representative transcript
(Inhibitor of growth protein 2; Inhibitor of growth 1-like protein; ING1Lp; p32; p33ING2;)
genome : 184,426,223 - 184,432,249 (6,027)
query : 1 - 1,113 (1,113/1,132)
2 exons
identity = 0.999
5'(0.997;1.000)3'
coverage = 0.999
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
IPR024610 : Inhibitor of growth protein, N-terminal
IPR028639 : Inhibitor of growth protein 2
IPR028651 : ING family
GO :
0003682 : Molecular Function : chromatin binding
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0008270 : Molecular Function : zinc ion binding
0008285 : Biological Process : negative regulation of cell proliferation
0016568 : Biological Process : chromatin modification
0043065 : Biological Process : positive regulation of apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004663)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK083144
Danio
sp. (Zebrafish) : BC076023
Gallus
sp. (Chicken) : BX930827
Tetraodon
sp. (Tetraodon) : CR732556
Macaca
sp. (Macaque) : DQ147943
Equus
sp. (Horse) : ENSECAT00000016128
Monodelphis
sp. (Opossum) : ENSMODT00000005291
Oryzias
sp. (Medaka) : ENSORLT00000015381
Pongo
sp. (Orangutan) : ENSPPYT00000017702
Takifugu
sp. (Fugu) : SINFRUT00000140908
Rattus
sp. (Rat) : XM_001059606
Pan
sp. (Chimpanzee) : XM_517550
Canis
sp. (Dog) : XM_540031
HIX0004663
HIT000058317
(
AB012853
)
(Inhibitor of growth protein 2; Inhibitor of growth 1-like protein; ING1Lp; p32; p33ING2;)
genome : 184,426,263 - 184,432,249 (5,987)
query : 6 - 1,078 (1,073/1,078)
2 exons
identity = 0.996
5'(1.000;0.995)3'
coverage = 0.995
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
IPR024610 : Inhibitor of growth protein, N-terminal
IPR028639 : Inhibitor of growth protein 2
IPR028651 : ING family
GO :
0003682 : Molecular Function : chromatin binding
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0008270 : Molecular Function : zinc ion binding
0008285 : Biological Process : negative regulation of cell proliferation
0016568 : Biological Process : chromatin modification
0043065 : Biological Process : positive regulation of apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004663)
HIX0004663
HIT000064529
(
AF053537
)
(Inhibitor of growth protein 2; Inhibitor of growth 1-like protein; ING1Lp; p32; p33ING2;)
genome : 184,426,282 - 184,432,249 (5,968)
query : 1 - 1,054 (1,054/1,080)
2 exons
identity = 0.999
5'(0.996;1.000)3'
coverage = 0.999
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
IPR024610 : Inhibitor of growth protein, N-terminal
IPR028639 : Inhibitor of growth protein 2
IPR028651 : ING family
GO :
0003682 : Molecular Function : chromatin binding
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0008270 : Molecular Function : zinc ion binding
0008285 : Biological Process : negative regulation of cell proliferation
0016568 : Biological Process : chromatin modification
0043065 : Biological Process : positive regulation of apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004663)
HIX0004663
HIT000244126
(
AJ006851
)
(Inhibitor of growth protein 2; Inhibitor of growth 1-like protein; ING1Lp; p32; p33ING2;)
genome : 184,426,349 - 184,432,105 (5,757)
query : 1 - 843 (843/843)
2 exons
identity = 0.996
5'(0.983;1.000)3'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
IPR024610 : Inhibitor of growth protein, N-terminal
IPR028639 : Inhibitor of growth protein 2
IPR028651 : ING family
GO :
0003682 : Molecular Function : chromatin binding
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0008270 : Molecular Function : zinc ion binding
0008285 : Biological Process : negative regulation of cell proliferation
0016568 : Biological Process : chromatin modification
0043065 : Biological Process : positive regulation of apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10, cyto 7, extr_plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004663)
HIX0004663
HIT000488934
(
AK294310
)
(Inhibitor of growth protein 2.)
genome : 184,427,235 - 184,432,204 (4,970)
query : 23 - 1,029 (1,007/1,029)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.979
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
IPR024610 : Inhibitor of growth protein, N-terminal
IPR028639 : Inhibitor of growth protein 2
IPR028651 : ING family
GO :
0003682 : Molecular Function : chromatin binding
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0008270 : Molecular Function : zinc ion binding
0008285 : Biological Process : negative regulation of cell proliferation
0016568 : Biological Process : chromatin modification
0043065 : Biological Process : positive regulation of apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12.5, cyto 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004663)
HIX0004663
HIT000510051 (
ENST00000412117
)
(Inhibitor of growth protein 2.)
genome : 184,427,235 - 184,431,796 (4,562)
query : 1 - 599 (599/599)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14, cyto 10.5, plas 2, extr 2,
cysk 2, extr_plas 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004663)
HIX0004663
HIT000486580
(
AB196793
)
(Inhibitor of growth protein 2.)
genome : 184,427,360 - 184,432,105 (4,746)
query : 1 - 783 (783/783)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
IPR024610 : Inhibitor of growth protein, N-terminal
IPR028639 : Inhibitor of growth protein 2
IPR028651 : ING family
GO :
0003682 : Molecular Function : chromatin binding
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0008270 : Molecular Function : zinc ion binding
0008285 : Biological Process : negative regulation of cell proliferation
0016568 : Biological Process : chromatin modification
0043065 : Biological Process : positive regulation of apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12.5, cyto 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004663)
HIX0004663
HIT000532616 (
ENST00000434682
)
(Inhibitor of growth protein 2.)
genome : 184,427,360 - 184,432,105 (4,746)
query : 1 - 783 (783/783)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12.5, cyto 7.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004663)
HIX0031635
HIT000257365
(
AY726581
)
Representative transcript
(Conserved hypothetical protein.)
genome : 184,434,540 - 184,479,735 (45,196)
query : 1 - 2,407 (2,407/2,421)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 9, nucl 4, cyto 4, cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031635)
HIX0004664
HIT000038022
(
BC017472
)
(RWD domain-containing protein 4; Protein FAM28A;)
genome : 184,560,792 - 184,580,307 (19,516)
query : 1 - 2,565 (2,565/2,579)
7 exons
identity = 0.998
3'(0.999;0.943;0.992;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006575 : RWD domain
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 7, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000124571 (
ENST00000326397
)
(RWD domain-containing protein 4; Protein FAM28A;)
genome : 184,560,788 - 184,580,378 (19,591)
query : 1 - 2,641 (2,641/2,641)
7 exons
identity = 0.999
3'(1.000;0.943;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000125063 (
ENST00000327570
)
(RWD domain-containing protein 4; Protein FAM28A;)
genome : 184,560,789 - 184,580,331 (19,543)
query : 1 - 2,590 (2,590/2,590)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000213937 (
NM_152682
)
(RWD domain-containing protein 4; Protein FAM28A;)
genome : 184,560,789 - 184,580,331 (19,543)
query : 1 - 2,593 (2,593/2,593)
7 exons
identity = 0.999
3'(1.000;0.943;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, cysk 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000004976
(
AK021702
)
(RWD domain-containing protein 4.)
genome : 184,561,075 - 184,580,295 (19,221)
query : 1 - 2,273 (2,273/2,273)
7 exons
identity = 0.997
3'(0.999;0.943;0.992;0.993;0.991;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000487898
(
AK293274
)
(RWD domain-containing protein 4.)
genome : 184,561,613 - 184,580,304 (18,692)
query : 1 - 1,551 (1,551/1,551)
5 exons
identity = 0.995
3'(0.996;0.943;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000610710_01 (
ENST00000510968
)
(RWD domain-containing protein 4.)
genome : 184,561,613 - 184,580,304 (18,692)
query : 1 - 1,551 (1,551/1,551)
5 exons
identity = 0.998
3'(1.000;0.943;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000338754
(
BC107432
)
Representative transcript
(RWD domain-containing protein 4; Protein FAM28A;)
genome : 184,561,769 - 184,580,149 (18,381)
query : 5 - 1,435 (1,431/1,460)
7 exons
identity = 0.996
3'(0.998;0.943;1.000;0.993;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR006575 : RWD domain
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : AJ388553
Mus
sp. (Mouse) : AK004597
Danio
sp. (Zebrafish) : BC083422
Rattus
sp. (Rat) : BC092581
Bos
sp. (Cow) : BC123494
Gallus
sp. (Chicken) : BX932210
Tetraodon
sp. (Tetraodon) : CR646041
Monodelphis
sp. (Opossum) : ENSMODT00000005314
Oryzias
sp. (Medaka) : ENSORLT00000015361
Pongo
sp. (Orangutan) : ENSPPYT00000017703
Takifugu
sp. (Fugu) : SINFRUT00000179679
Macaca
sp. (Macaque) : XM_001097379
Equus
sp. (Horse) : XM_001492050
Pan
sp. (Chimpanzee) : XM_526746
HIX0004664
HIT000610463_01 (
ENST00000510702
)
(RWD domain-containing protein 4.)
genome : 184,561,781 - 184,580,354 (18,574)
query : 1 - 1,620 (1,620/1,620)
7 exons
identity = 0.998
3'(1.000;0.943;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 9, extr 5, cyto 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000612368_01 (
ENST00000512740
)
(RWD domain-containing protein 4.)
genome : 184,561,882 - 184,580,309 (18,428)
query : 1 - 1,393 (1,393/1,393)
6 exons
identity = 0.998
3'(1.000;0.943;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 9, extr 5, cyto 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000262720
(
BC067752
)
(RWD domain-containing protein 4; Protein FAM28A;)
genome : 184,562,374 - 184,580,331 (17,958)
query : 1 - 1,008 (1,008/1,025)
7 exons
identity = 0.997
3'(1.000;0.943;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR006575 : RWD domain
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000613830_01 (
ENST00000514322
)
(RWD domain-containing protein 4; Protein FAM28A;)
genome : 184,562,492 - 184,580,356 (17,865)
query : 1 - 805 (805/805)
6 exons
identity = 0.996
3'(1.000;0.943;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13.5, nucl 11.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000434381
(
AK315515
)
(RWD domain-containing protein 4; Protein FAM28A;)
genome : 184,562,589 - 184,580,306 (17,718)
query : 1 - 768 (768/768)
7 exons
identity = 0.996
3'(1.000;0.943;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006575 : RWD domain
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000606531 (
ENST00000506467
)
(RWD domain-containing protein 4.)
genome : 184,572,433 - 184,577,249 (4,817)
query : 1 - 264 (264/264)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12, extr 9, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0206099
HIT000615751 (
ENST00000516348
)
(Non-protein coding transcript.)
genome : 184,574,725 - 184,574,829 (105)
query : 1 - 105 (105/105)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206099)
HIX0004658
HIT000055774_03
(
BX647127
)
Representative transcript
(Trafficking protein particle complex subunit 11;)
genome : 184,580,449 - 184,634,740 (54,292)
query : 1 - 4,518 (4,518/4,578)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR012880 : Domain of unknown function DUF1683, C-terminal
IPR021773 : Foie gras liver health family 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 6, pero 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169329
Gallus
sp. (Chicken) : AJ720895
Mus
sp. (Mouse) : AK083445
Danio
sp. (Zebrafish) : AY648743
Bos
sp. (Cow) : BC147917
Oryzias
sp. (Medaka) : ENSORLT00000013565
Pongo
sp. (Orangutan) : ENSPPYT00000017704
Pan
sp. (Chimpanzee) : ENSPTRT00000049995
Tetraodon
sp. (Tetraodon) : GSTENT00012055001
Takifugu
sp. (Fugu) : SINFRUT00000135459
Rattus
sp. (Rat) : XM_001059837
Monodelphis
sp. (Opossum) : XM_001364010
Equus
sp. (Horse) : XM_001491998
Canis
sp. (Dog) : XM_540029
HIX0004658
HIT000099376_03
(
BC051724
)
(Trafficking protein particle complex subunit 11;)
genome : 184,580,476 - 184,634,741 (54,266)
query : 1 - 4,373 (4,373/4,442)
30 exons
identity = 0.996
5'(0.992;1.000;0.994;1.000;1.000;0.990;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000604735 (
ENST00000504526
)
(Trafficking protein particle complex subunit 11;)
genome : 184,580,476 - 184,587,531 (7,056)
query : 1 - 503 (503/503)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000613158 (
ENST00000513600
)
(Trafficking protein particle complex subunit 11;)
genome : 184,588,046 - 184,596,398 (8,353)
query : 1 - 533 (533/545)
4 exons
identity = 0.996
5'(1.000;1.000;1.000;0.976)3'
coverage = 0.978
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_mito 13.5, extr 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000611131 (
ENST00000511409
)
(Trafficking protein particle complex subunit 11;)
genome : 184,588,109 - 184,598,691 (10,583)
query : 1 - 568 (568/568)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13, extr 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000016013
(
AK091146
)
(Trafficking protein particle complex subunit 11;)
genome : 184,595,880 - 184,634,740 (38,861)
query : 1 - 3,652 (3,652/3,652)
25 exons
identity = 0.995
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000433923
(
AK315057
)
(Conserved hypothetical protein.)
genome : 184,595,898 - 184,633,797 (37,900)
query : 1 - 2,810 (2,810/2,810)
25 exons
identity = 0.999
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0216178
HIT000611388 (
ENST00000511685
)
(Teneurin-3 family protein.)
genome : 183,245,097 - 183,724,177 (479,081)
query : 47 - 10,896 (10,850/10,896)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, cyto 8, cyto_nucl 7.33333, extr_plas 6.5,
nucl 5.5, cyto_mito 5.5, mito_pero 3.33333, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216178)
HIX0216178
HIT000398065 (
NM_001080477
)
(Teneurin-3 family protein.)
genome : 183,245,137 - 183,724,177 (479,041)
query : 1 - 10,810 (10,810/10,810)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, cyto 8, cyto_nucl 7.33333, extr_plas 6.5,
nucl 5.5, cyto_mito 5.5, mito_pero 3.33333, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216178)
HIX0216178
HIT000505795 (
ENST00000406950
)
(Teneurin-3 family protein.)
genome : 183,245,174 - 183,721,832 (476,659)
query : 1 - 8,428 (8,428/8,428)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, cyto 8, cyto_nucl 7.33333, extr_plas 6.5,
nucl 5.5, cyto_mito 5.5, mito_pero 3.33333, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216178)
HIX0004660
HIT000504596 (
ENST00000403733
)
(Protein WWC2; BH-3-only member B; WW domain-containing protein 2;)
genome : 184,020,446 - 184,241,930 (221,485)
query : 1 - 8,826 (8,826/8,826)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004660)
HIX0004660
HIT000209622 (
NM_024949
)
(Protein WWC2; BH-3-only member B; WW domain-containing protein 2;)
genome : 184,020,463 - 184,241,928 (221,466)
query : 1 - 8,807 (8,807/8,822)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004660)
HIX0004660
HIT000546166 (
ENST00000448232
)
(Protein WWC2; BH-3-only member B; WW domain-containing protein 2;)
genome : 184,020,645 - 184,239,587 (218,943)
query : 1 - 6,356 (6,356/6,356)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004660)
HIX0004660
HIT000613377 (
ENST00000513834
)
(Protein WWC2.)
genome : 184,020,645 - 184,238,325 (217,681)
query : 1 - 4,875 (4,875/4,887)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004660)
HIX0004660
HIT000056025
(
BX647378
)
(Protein WWC2.)
genome : 184,114,768 - 184,239,902 (125,135)
query : 1 - 6,374 (6,374/6,492)
21 exons
identity = 0.998
5'(0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;0.995;0.994;1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13, extr 9, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004660)
HIX0004660
HIT000525365 (
ENST00000427431
)
(Protein WWC2.)
genome : 184,114,768 - 184,239,903 (125,136)
query : 1 - 6,373 (6,373/6,373)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13, extr 9, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004660)
HIX0004660
HIT000045930
(
AK126057
)
Representative transcript
(Protein WWC2.)
genome : 184,124,669 - 184,237,051 (112,383)
query : 1 - 3,824 (3,824/3,824)
24 exons
identity = 0.999
5'(1.000;0.995;1.000;0.988;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
0.996;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9, cyto_golg 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004660)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK147648
Gallus
sp. (Chicken) : CR353085
Equus
sp. (Horse) : ENSECAT00000018767
Pongo
sp. (Orangutan) : ENSPPYT00000017697
Pan
sp. (Chimpanzee) : ENSPTRT00000030879
Tetraodon
sp. (Tetraodon) : GSTENT00014581001
Takifugu
sp. (Fugu) : SINFRUT00000172798
Rattus
sp. (Rat) : XM_001059192
Macaca
sp. (Macaque) : XM_001092580
Monodelphis
sp. (Opossum) : XM_001364404
Canis
sp. (Dog) : XM_540035
Bos
sp. (Cow) : XM_611687
Danio
sp. (Zebrafish) : XM_684183
HIX0004660
HIT000536477 (
ENST00000438543
)
(Protein WWC2.)
genome : 184,124,669 - 184,237,051 (112,383)
query : 1 - 3,824 (3,824/3,824)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12.5, cyto_golg 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004660)
HIX0004660
HIT000046934
(
AK127061
)
(Protein WWC2.)
genome : 184,130,132 - 184,239,456 (109,325)
query : 1 - 5,248 (5,248/5,248)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004660)
HIX0004660
HIT000604257 (
ENST00000504005
)
(Protein WWC2.)
genome : 184,130,132 - 184,239,456 (109,325)
query : 1 - 5,247 (5,247/5,247)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004660)
HIX0004660
HIT000054005
(
BC053873
)
(Protein WWC2.)
genome : 184,180,838 - 184,238,325 (57,488)
query : 1 - 3,634 (3,634/3,649)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;0.995;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 11.1667, nucl 11,
cyto_nucl 9.33333, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004660)
HIX0004660
HIT000056351
(
BX647704
)
(Protein WWC2.)
genome : 184,186,893 - 184,239,587 (52,695)
query : 1 - 4,263 (4,263/4,280)
11 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 9, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004660)
HIX0004660
HIT000015040
(
AK074260
)
(Protein WWC2.)
genome : 184,187,015 - 184,239,591 (52,577)
query : 12 - 4,171 (4,160/4,189)
10 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994)3'
coverage = 0.996
InterPro :
IPR000008 : C2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24.5, cyto_mito 13.8333, nucl 5.5,
cyto_nucl 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004660)
HIX0004660
HIT000248859
(
AJ566366
)
(Protein WWC2.)
genome : 184,187,034 - 184,236,890 (49,857)
query : 1 - 1,451 (1,451/1,451)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;0.992;1.000;1.000;1.000;
0.996;1.000;0.987)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, cyto_mito 12.3333, nucl 6.5,
cyto_nucl 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004660)
HIX0216145
HIT000208489 (
NM_021942
)
(Foie gras liver health family 1 domain containing protein.)
genome : 184,580,420 - 184,634,747 (54,328)
query : 1 - 4,554 (4,554/4,564)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 6, pero 5, mito_nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000319600 (
NM_199053
)
(Foie gras liver health family 1 domain containing protein.)
genome : 184,580,420 - 184,634,747 (54,328)
query : 1 - 4,435 (4,435/4,445)
30 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 5, mito 5, pero 5, mito_pero 5,
mito_nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000129115 (
ENST00000334690
)
(Foie gras liver health family 1 domain containing protein.)
genome : 184,580,420 - 184,634,745 (54,326)
query : 1 - 4,552 (4,552/4,552)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 6, pero 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000028483
(
AL833571
)
(Trafficking protein particle complex subunit 11 isoform b.)
genome : 184,580,441 - 184,634,745 (54,305)
query : 1 - 4,472 (4,472/4,490)
30 exons
identity = 0.997
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR012880 : Domain of unknown function DUF1683, C-terminal
IPR021773 : Foie gras liver health family 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, nucl 6.5, mito 5, pero 5,
mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000057146
(
BX648499
)
Representative transcript
(Trafficking protein particle complex subunit 11;)
genome : 184,580,446 - 184,633,931 (53,486)
query : 2 - 3,713 (3,712/3,883)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.994
InterPro :
IPR012880 : Domain of unknown function DUF1683, C-terminal
IPR021773 : Foie gras liver health family 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 6, pero 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000311083 (
ENST00000357207
)
(Foie gras liver health family 1 domain containing protein.)
genome : 184,580,446 - 184,634,744 (54,299)
query : 1 - 4,406 (4,406/4,406)
30 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 5, mito 5, pero 5, mito_pero 5,
mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000021200
(
AK096345
)
(Conserved hypothetical protein.)
genome : 184,580,446 - 184,634,740 (54,295)
query : 1 - 4,521 (4,521/4,521)
30 exons
identity = 0.999
5'(1.000;0.996;1.000;0.986;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000054828
(
BX538044
)
(Conserved hypothetical protein.)
genome : 184,580,467 - 184,634,745 (54,279)
query : 2 - 4,506 (4,505/4,527)
30 exons
identity = 0.999
5'(1.000;0.996;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000096204
(
BC040530
)
(Conserved hypothetical protein.)
genome : 184,580,470 - 184,634,745 (54,276)
query : 1 - 4,501 (4,501/4,516)
30 exons
identity = 0.999
5'(1.000;0.996;1.000;1.000;1.000;1.000;0.986;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000391176
(
BC139745
)
(Trafficking protein particle complex subunit 11;)
genome : 184,580,529 - 184,634,176 (53,648)
query : 1 - 2,244 (2,244/2,244)
18 exons
identity = 0.995
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000605789 (
ENST00000505676
)
(Conserved hypothetical protein.)
genome : 184,580,529 - 184,634,176 (53,648)
query : 1 - 2,244 (2,244/2,244)
18 exons
identity = 0.995
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000028363
(
AL833451
)
(Conserved hypothetical protein.)
genome : 184,585,009 - 184,634,744 (49,736)
query : 1 - 4,357 (4,357/4,378)
29 exons
identity = 0.999
5'(0.991;0.994;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000609694 (
ENST00000509857
)
(Conserved hypothetical protein.)
genome : 184,585,170 - 184,596,002 (10,833)
query : 1 - 548 (548/548)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 7, mito 7, mito_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0205222
eHIT000017534 ( ESTsASS_4_453 )
Representative transcript
(Non-protein coding transcript.)
genome : 184,252,859 - 184,270,931 (18,073)
query : 1 - 469 (469/469)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205222)
ESTs used for assembly :
BF511947 Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_526745
AC098864.3
183000001-183056533 F +
NCBI
AC108142.3
183056534-183115157 F +
NCBI
AC131943.1
183115158-183248744 F +
NCBI
AC093601.4
183248745-183364873 F +
NCBI
AC109353.3
183364874-183417400 F +
NCBI
AC105288.3
183417401-183558315 F +
NCBI
AC079226.7
183558316-183740347 F +
NCBI
AC114798.5
183740348-183772372 F +
NCBI
AC079766.7
183772373-183900246 F +
NCBI
AC019193.7
183900247-184075969 F +
NCBI
AC099397.5
184075970-184128845 F +
NCBI
AC093844.3
184128846-184324889 F +
NCBI
AC112698.4
184324890-184388224 F +
NCBI
AC107214.5
184388225-184547662 F +
NCBI
AC108477.5
184547663-184600000 F +
NCBI