bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0021540
HIT000607432 (
ENST00000507440
)
(Trans-2,3-enoyl-CoA reductase-like.)
genome : 65,140,975 - 65,275,186 (134,212)
query : 1 - 2,876 (2,876/2,876)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 24.5, cyto_mito 13.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021540)
HIX0021540
HIT000028020
(
AL833108
)
Representative transcript
(Trans-2,3-enoyl-CoA reductase-like; EC=1.3.1.-; Steroid 5-alpha-reductase 2-like 2 protein;)
genome : 65,143,422 - 65,275,178 (131,757)
query : 2 - 3,568 (3,567/3,596)
12 exons
identity = 0.995
3'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.-
InterPro :
IPR001104 : 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
GO :
0005737 : Cellular Component : cytoplasm
0006629 : Biological Process : lipid metabolic process
0016021 : Cellular Component : integral component of membrane
0016627 : Molecular Function : oxidoreductase activity, acting on the CH-CH group of donors
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23.5, cyto_mito 13, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021540)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF548365
Bos
sp. (Cow) : BC103046
Gallus
sp. (Chicken) : CR352667
Pongo
sp. (Orangutan) : CR859616
Equus
sp. (Horse) : ENSECAT00000017858
Oryzias
sp. (Medaka) : ENSORLT00000018634
Rattus
sp. (Rat) : ENSRNOT00000002621
Tetraodon
sp. (Tetraodon) : GSTENT00016634001
Tetraodon
sp. (Tetraodon) : GSTENT00019764001
Takifugu
sp. (Fugu) : SINFRUT00000135597
Takifugu
sp. (Fugu) : SINFRUT00000142742
Macaca
sp. (Macaque) : XM_001110088
Pan
sp. (Chimpanzee) : XM_001165357
Danio
sp. (Zebrafish) : XM_001339010
Monodelphis
sp. (Opossum) : XM_001368254
Canis
sp. (Dog) : XM_532387
HIX0021540
HIT000362488 (
ENST00000381210
)
(Trans-2,3-enoyl-CoA reductase-like; EC=1.3.1.-; Steroid 5-alpha-reductase 2-like 2 protein;)
genome : 65,143,420 - 65,275,180 (131,761)
query : 1 - 3,573 (3,573/3,573)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23.5, cyto_mito 13, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021540)
HIX0021540
HIT000316724 (
NM_001010874
)
(Trans-2,3-enoyl-CoA reductase-like; EC=1.3.1.-; Steroid 5-alpha-reductase 2-like 2 protein;)
genome : 65,144,177 - 65,275,178 (131,002)
query : 1 - 2,814 (2,814/2,843)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23.5, cyto_mito 13, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021540)
HIX0021540
HIT000056237
(
BX647590
)
(Trans-2,3-enoyl-CoA reductase-like; EC=1.3.1.-; Steroid 5-alpha-reductase 2-like 2 protein;)
genome : 65,144,177 - 65,275,115 (130,939)
query : 1 - 2,749 (2,749/2,778)
12 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.1.-
InterPro :
IPR001104 : 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
GO :
0005737 : Cellular Component : cytoplasm
0006629 : Biological Process : lipid metabolic process
0016021 : Cellular Component : integral component of membrane
0016627 : Molecular Function : oxidoreductase activity, acting on the CH-CH group of donors
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23.5, cyto_mito 13, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021540)
HIX0021540
HIT000423403
(
AK290606
)
(Trans-2,3-enoyl-CoA reductase-like; EC=1.3.1.-; Steroid 5-alpha-reductase 2-like 2 protein;)
genome : 65,145,298 - 65,275,172 (129,875)
query : 3 - 1,688 (1,686/1,688)
12 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.3.1.-
InterPro :
IPR001104 : 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
GO :
0005737 : Cellular Component : cytoplasm
0006629 : Biological Process : lipid metabolic process
0016021 : Cellular Component : integral component of membrane
0016627 : Molecular Function : oxidoreductase activity, acting on the CH-CH group of donors
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23.5, cyto_mito 13, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021540)
HIX0021540
HIT000611684 (
ENST00000511997
)
(Trans-2,3-enoyl-CoA reductase-like.)
genome : 65,145,793 - 65,147,254 (1,462)
query : 1 - 188 (188/188)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 7.5, mito_pero 5, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021540)
HIX0021540
HIT000612721 (
ENST00000513125
)
(Trans-2,3-enoyl-CoA reductase-like.)
genome : 65,164,582 - 65,180,481 (15,900)
query : 9 - 733 (725/733)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.989
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, cyto_nucl 7.5, cyto 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021540)
HIX0021540
HIT000264906
(
BC072463
)
(Trans-2,3-enoyl-CoA reductase-like.)
genome : 65,170,649 - 65,275,174 (104,526)
query : 5 - 1,074 (1,070/1,100)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.997)5'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021540)
HIX0021540
HIT000611079 (
ENST00000511356
)
(Trans-2,3-enoyl-CoA reductase-like.)
genome : 65,170,623 - 65,275,174 (104,552)
query : 1 - 1,096 (1,096/1,096)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021540)
HIX0021540
HIT000609396 (
ENST00000509536
)
(Trans-2,3-enoyl-CoA reductase-like.)
genome : 65,188,405 - 65,275,116 (86,712)
query : 1 - 484 (484/484)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, mito_nucl 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021540)
HIX0205730
HIT000608876 (
ENST00000508984
)
(Conserved hypothetical protein.)
genome : 65,296,627 - 65,298,933 (2,307)
query : 1 - 2,063 (2,063/2,063)
2 exons
identity = 0.998
5'(0.998;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.3333, cyto 15, cyto_pero 8.83333,
nucl 8.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205730)
HIX0206004
HIT000613898 (
ENST00000514397
)
(Hypothetical protein.)
genome : 65,472,136 - 65,472,331 (196)
query : 1 - 196 (196/196)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206004)
HIX0205742
HIT000609068 (
ENST00000509187
)
(Conserved hypothetical protein.)
genome : 65,473,421 - 65,474,549 (1,129)
query : 1 - 1,129 (1,129/1,129)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 11, cyto_nucl 8, extr 3, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205742)
HIX0205462
HIT000604258 (
ENST00000504006
)
(NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 family protein.)
genome : 65,474,623 - 65,475,142 (520)
query : 1 - 520 (520/520)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, lyso 11, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205462)
HIX0205929
HIT000612648 (
ENST00000513046
)
(NADH dehydrogenase subunit 5, C-terminal domain containing protein.)
genome : 65,475,172 - 65,476,250 (1,079)
query : 1 - 1,079 (1,079/1,079)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15, plas 6, nucl 3, cyto 3, cyto_nucl 3,
cysk_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205929)
HIX0206034
HIT000614327 (
ENST00000514859
)
(NADH-ubiquinone oxidoreductase chain 4L/K family protein.)
genome : 65,476,334 - 65,476,627 (294)
query : 1 - 294 (294/294)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206034)
HIX0205571
HIT000606376 (
ENST00000506306
)
(Conserved hypothetical protein.)
genome : 65,476,698 - 65,477,026 (329)
query : 1 - 329 (329/329)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 13, nucl 12, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205571)
HIX0205943
HIT000612929 (
ENST00000513351
)
(Cytochrome c oxidase subunit III domain containing protein.)
genome : 65,477,092 - 65,477,606 (515)
query : 1 - 515 (515/515)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, mito 2, cyto 1, E.R. 1, lyso 1, golg 1,
mito_pero 1, E.R._golg 1, cyto_golg 1, mito_nucl 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205943)
HIX0205302
HIT000577691 (
ENST00000473356
)
(Conserved hypothetical protein.)
genome : 65,632,848 - 65,633,615 (768)
query : 1 - 768 (768/768)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 10, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205302)
HIX0031716
HIT000096212
(
BC040544
)
Representative transcript
(Conserved hypothetical protein.)
genome : 65,779,999 - 65,870,218 (90,220)
query : 1 - 4,079 (4,079/4,115)
7 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.988;1.000;0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 13, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031716)
HIX0031716
HIT000659133 (
NR_033976
)
(Conserved hypothetical protein.)
genome : 65,779,999 - 65,870,218 (90,220)
query : 1 - 4,079 (4,079/4,089)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 13, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031716)
HIX0031716
HIT000609763 (
ENST00000509932
)
(Conserved hypothetical protein.)
genome : 65,779,999 - 65,870,218 (90,220)
query : 1 - 4,079 (4,079/4,079)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 13, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031716)
HIX0205941
HIT000612880 (
ENST00000513297
)
(Zinc finger, B-box domain containing protein.)
genome : 65,900,352 - 65,901,735 (1,384)
query : 1 - 1,384 (1,384/1,384)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 5, nucl 4.5, cyto 4.5, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205941)
HIX0206029
HIT000614286 (
ENST00000514817
)
(Conserved hypothetical protein.)
genome : 66,008,421 - 66,011,481 (3,061)
query : 1 - 1,603 (1,603/1,603)
4 exons
identity = 0.987
3'(0.990;0.996;0.926;0.966)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206029)
HIX0205724
HIT000608806 (
ENST00000508904
)
(Conserved hypothetical protein.)
genome : 66,082,334 - 66,083,151 (818)
query : 1 - 818 (818/818)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, nucl 4, cyto 2, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205724)
AC020740.5
64500001-64648602 F -
NCBI
AC108055.5
64648603-64697255 F +
NCBI
AC104800.5
64697256-64749873 F +
NCBI
AC017109.5
64749874-64943042 F +
NCBI
AC068717.5
64943043-65027790 F +
NCBI
AC023156.5
65027791-65185300 F +
NCBI
AC023110.8
65185301-65350304 F +
NCBI
AC080082.4
65350305-65368994 F +
NCBI
AC097648.2
65368995-65537283 F +
NCBI
AC105426.4
65537284-65591058 F +
NCBI
AC104689.4
65591059-65750486 F +
NCBI
AC123579.4
65750487-65763519 F +
NCBI
AC115627.4
65763520-65808479 F +
NCBI
AC107058.4
65808480-65932614 F +
NCBI
AC096754.2
65932615-66083618 F +
NCBI
AC018683.4
66083619-66100000 F -
NCBI