bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0207357
HIT000623599 (
ENST00000524336
)
genome : 103,718,999 - 104,246,434 (527,436)
query : 1 - 275 (275/275)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207357)
HIX0207357
HIT000603925 (
ENST00000503650
)
genome : 103,819,905 - 104,728,671 (908,767)
query : 1 - 777 (777/777)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207357)
HIX0206229
HIT000607005 (
ENST00000506976
)
genome : 103,966,088 - 104,109,523 (143,436)
query : 1 - 464 (464/464)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206229)
HIX0206229
HIT000605930 (
ENST00000505824
)
genome : 103,966,237 - 104,109,492 (143,256)
query : 1 - 404 (404/404)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206229)
HIX0206229
HIT000623350 (
ENST00000524083
)
genome : 104,072,462 - 104,075,242 (2,781)
query : 1 - 316 (316/316)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206229)
HIX0206229
HIT000622714 (
ENST00000523434
)
genome : 104,074,955 - 104,109,397 (34,443)
query : 1 - 486 (486/486)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206229)
HIX0206229
HIT000623423 (
ENST00000524159
)
genome : 104,074,962 - 104,082,310 (7,349)
query : 1 - 360 (360/360)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206229)
HIX0206229
HIT000617659 (
ENST00000518276
)
genome : 104,079,393 - 104,109,361 (29,969)
query : 1 - 472 (472/472)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206229)
HIX0206229
HIT000622124 (
ENST00000522838
)
genome : 104,098,932 - 104,109,485 (10,554)
query : 1 - 325 (325/325)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206229)
HIX0207348
HIT000623017 (
ENST00000523745
)
genome : 104,109,342 - 104,135,473 (26,132)
query : 1 - 567 (567/567)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207348)
HIX0032543
HIT000617150 (
ENST00000517758
)
genome : 104,253,193 - 104,344,618 (91,426)
query : 1 - 464 (464/464)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032543)
HIX0032543
HIT000621760 (
ENST00000522464
)
genome : 104,308,988 - 104,344,612 (35,625)
query : 69 - 789 (721/789)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.914
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032543)
HIX0032139
HIT000618931 (
ENST00000519581
)
genome : 104,435,174 - 104,435,799 (626)
query : 1 - 626 (626/626)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032139)
HIX0032139
HIT000215547 (
NR_000039
)
genome : 104,435,175 - 104,435,799 (625)
query : 1 - 625 (625/625)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032139)
HIX0032139
HIT000219914
(
U44105
)
genome : 104,435,177 - 104,435,799 (623)
query : 3 - 623 (621/623)
1 exon
identity = 0.986
5'(0.986)3'
coverage = 0.997
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032139)
HIX0032139
HIT000517245 (
ENST00000419311
)
genome : 104,435,175 - 104,435,799 (625)
query : 1 - 624 (624/624)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032139)
AC091966.3
103500001-103527762 F +
NCBI
AC016566.6
103527763-103665187 F -
NCBI
AC091931.2
103665188-103848856 F -
NCBI
AC093255.2
103848857-103899470 F +
NCBI
AC022124.6
103899471-103983497 F -
NCBI
AC026733.5
103983498-104069866 F +
NCBI
AC099520.2
104069867-104243212 F +
NCBI
AC008970.4
104243213-104319161 F +
NCBI
AC091987.2
104319162-104462142 F -
NCBI
AC010590.7
104462143-104534365 F +
NCBI
AC011361.4
104534366-104686153 F +
NCBI
AC008788.5
104686154-104721739 F +
NCBI
AC113401.2
104721740-104829957 F +
NCBI
AC117535.2
104829958-104956521 F +
NCBI
AC106797.2
104956522-105027491 F -
NCBI
AC114288.2
105027492-105100000 F -
NCBI