bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0031947
HIT000197619 (
NM_000589
)
(Interleukin-4; IL-4; B-cell stimulatory factor 1; BSF-1; Binetrakin; Lymphocyte stimulatory factor 1; Pitrakinra; Precursor;)
genome : 132,009,678 - 132,018,369 (8,692)
query : 1 - 617 (617/642)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
HIX0031947
HIT000214723 (
NM_172348
)
(Interleukin-4 isoform 2 precursor.)
genome : 132,009,678 - 132,018,369 (8,692)
query : 1 - 569 (569/594)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
HIX0031947
HIT000104376 (
ENST00000231449
)
(Interleukin-4; IL-4; B-cell stimulatory factor 1; BSF-1; Binetrakin; Lymphocyte stimulatory factor 1; Pitrakinra; Precursor;)
genome : 132,009,678 - 132,018,368 (8,691)
query : 1 - 616 (616/616)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
HIX0031947
HIT000262172
(
BC066277
)
(Interleukin-4; IL-4; B-cell stimulatory factor 1; BSF-1; Binetrakin; Lymphocyte stimulatory factor 1; Pitrakinra; Precursor;)
genome : 132,009,678 - 132,018,280 (8,603)
query : 1 - 527 (527/527)
4 exons
identity = 0.996
5'(0.995;1.000;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR001325 : Interleukin-4/interleukin-13
IPR002354 : Interleukin-4
IPR009079 : Four-helical cytokine-like, core
IPR012351 : Four-helical cytokine, core
IPR018096 : Interleukin-4/interleukin-13, conserved site
GO :
0005126 : Molecular Function : cytokine receptor binding
0005136 : Molecular Function : interleukin-4 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
HIX0031947
HIT000262173
(
BC066278
)
(Interleukin-4; IL-4; B-cell stimulatory factor 1; BSF-1; Binetrakin; Lymphocyte stimulatory factor 1; Pitrakinra; Precursor;)
genome : 132,009,678 - 132,018,280 (8,603)
query : 1 - 528 (528/528)
4 exons
identity = 0.994
5'(0.985;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001325 : Interleukin-4/interleukin-13
IPR002354 : Interleukin-4
IPR009079 : Four-helical cytokine-like, core
IPR012351 : Four-helical cytokine, core
IPR018096 : Interleukin-4/interleukin-13, conserved site
GO :
0005126 : Molecular Function : cytokine receptor binding
0005136 : Molecular Function : interleukin-4 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
HIX0031947
HIT000262672
(
BC067514
)
(Interleukin-4; IL-4; B-cell stimulatory factor 1; BSF-1; Binetrakin; Lymphocyte stimulatory factor 1; Pitrakinra; Precursor;)
genome : 132,009,678 - 132,018,280 (8,603)
query : 1 - 528 (528/528)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001325 : Interleukin-4/interleukin-13
IPR002354 : Interleukin-4
IPR009079 : Four-helical cytokine-like, core
IPR012351 : Four-helical cytokine, core
IPR018096 : Interleukin-4/interleukin-13, conserved site
GO :
0005126 : Molecular Function : cytokine receptor binding
0005136 : Molecular Function : interleukin-4 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
HIX0031947
HIT000262673
(
BC067515
)
(Interleukin-4; IL-4; B-cell stimulatory factor 1; BSF-1; Binetrakin; Lymphocyte stimulatory factor 1; Pitrakinra; Precursor;)
genome : 132,009,678 - 132,018,280 (8,603)
query : 1 - 528 (528/528)
4 exons
identity = 0.998
5'(1.000;1.000;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR001325 : Interleukin-4/interleukin-13
IPR002354 : Interleukin-4
IPR009079 : Four-helical cytokine-like, core
IPR012351 : Four-helical cytokine, core
IPR018096 : Interleukin-4/interleukin-13, conserved site
GO :
0005126 : Molecular Function : cytokine receptor binding
0005136 : Molecular Function : interleukin-4 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
HIX0031947
HIT000194286
(
M13982
)
Representative transcript
(Interleukin-4; IL-4; B-cell stimulatory factor 1; BSF-1; Binetrakin; Lymphocyte stimulatory factor 1; Pitrakinra; Precursor;)
genome : 132,009,681 - 132,018,368 (8,688)
query : 2 - 614 (613/614)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR001325 : Interleukin-4/interleukin-13
IPR002354 : Interleukin-4
IPR009079 : Four-helical cytokine-like, core
IPR012351 : Four-helical cytokine, core
IPR018096 : Interleukin-4/interleukin-13, conserved site
GO :
0005126 : Molecular Function : cytokine receptor binding
0005136 : Molecular Function : interleukin-4 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : AF239917
Equus
sp. (Horse) : AF305617
Pan
sp. (Chimpanzee) : AY130260
Macaca
sp. (Macaque) : AY376144
Pongo
sp. (Orangutan) : ENSPPYT00000018342
Mus
sp. (Mouse) : M13238
Bos
sp. (Cow) : M77120
Rattus
sp. (Rat) : X16058
HIX0031947
HIT000264081
(
BC070123
)
(Interleukin-4; IL-4; B-cell stimulatory factor 1; BSF-1; Binetrakin; Lymphocyte stimulatory factor 1; Pitrakinra; Precursor;)
genome : 132,009,681 - 132,018,367 (8,687)
query : 1 - 612 (612/641)
4 exons
identity = 0.997
5'(0.990;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR001325 : Interleukin-4/interleukin-13
IPR002354 : Interleukin-4
IPR009079 : Four-helical cytokine-like, core
IPR012351 : Four-helical cytokine, core
IPR018096 : Interleukin-4/interleukin-13, conserved site
GO :
0005126 : Molecular Function : cytokine receptor binding
0005136 : Molecular Function : interleukin-4 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
HIX0031947
HIT000434889
(
AM937235
)
(Interleukin-4; IL-4; B-cell stimulatory factor 1; BSF-1; Binetrakin; Lymphocyte stimulatory factor 1; Pitrakinra; Precursor;)
genome : 132,009,703 - 132,018,297 (8,595)
query : 1 - 520 (520/520)
4 exons
identity = 0.996
5'(0.994;1.000;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR001325 : Interleukin-4/interleukin-13
IPR002354 : Interleukin-4
IPR009079 : Four-helical cytokine-like, core
IPR012351 : Four-helical cytokine, core
IPR018096 : Interleukin-4/interleukin-13, conserved site
GO :
0005126 : Molecular Function : cytokine receptor binding
0005136 : Molecular Function : interleukin-4 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
HIX0031947
HIT000242240
(
AB102862
)
(Interleukin-4 isoform 2 precursor.)
genome : 132,009,743 - 132,018,279 (8,537)
query : 1 - 414 (414/414)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001325 : Interleukin-4/interleukin-13
IPR002354 : Interleukin-4
IPR009079 : Four-helical cytokine-like, core
IPR012351 : Four-helical cytokine, core
GO :
0005126 : Molecular Function : cytokine receptor binding
0005136 : Molecular Function : interleukin-4 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
HIX0031947
HIT000307886 (
ENST00000350025
)
(Interleukin-4 isoform 2 precursor.)
genome : 132,009,743 - 132,018,279 (8,537)
query : 1 - 414 (414/414)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
HIX0031947
HIT000323891
(
X81851
)
(Interleukin-4 isoform 2 precursor.)
genome : 132,009,743 - 132,018,279 (8,537)
query : 1 - 414 (414/414)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001325 : Interleukin-4/interleukin-13
IPR002354 : Interleukin-4
IPR009079 : Four-helical cytokine-like, core
IPR012351 : Four-helical cytokine, core
GO :
0005126 : Molecular Function : cytokine receptor binding
0005136 : Molecular Function : interleukin-4 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
HIX0031947
HIT000063733
(
AF043336
)
(Interleukin-4; IL-4; B-cell stimulatory factor 1; BSF-1; Binetrakin; Lymphocyte stimulatory factor 1; Pitrakinra; Precursor;)
genome : 132,009,812 - 132,018,279 (8,468)
query : 1 - 345 (345/345)
3 exons
identity = 0.994
5'(0.985;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR001325 : Interleukin-4/interleukin-13
IPR002354 : Interleukin-4
IPR009079 : Four-helical cytokine-like, core
IPR012351 : Four-helical cytokine, core
GO :
0005126 : Molecular Function : cytokine receptor binding
0005136 : Molecular Function : interleukin-4 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
HIX0031947
HIT000599253 (
ENST00000495905
)
(Interleukin-4; IL-4; B-cell stimulatory factor 1; BSF-1; Binetrakin; Lymphocyte stimulatory factor 1; Pitrakinra; Precursor;)
genome : 132,010,050 - 132,015,561 (5,512)
query : 1 - 305 (305/305)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 5, mito 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
HIX0031947
HIT000395060
(
EF173851
)
(Interleukin-4; IL-4; B-cell stimulatory factor 1; BSF-1; Binetrakin; Lymphocyte stimulatory factor 1; Pitrakinra; Precursor;)
genome : 132,010,148 - 132,018,246 (8,099)
query : 3 - 299 (297/299)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.993
InterPro :
IPR002354 : Interleukin-4
IPR009079 : Four-helical cytokine-like, core
IPR012351 : Four-helical cytokine, core
GO :
0005136 : Molecular Function : interleukin-4 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, cyto_nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
HIX0031947
HIT000428978
(
AK310112
)
(Interleukin-4; IL-4; B-cell stimulatory factor 1; BSF-1; Binetrakin; Lymphocyte stimulatory factor 1; Pitrakinra; Precursor;)
genome : 132,014,777 - 132,018,321 (3,545)
query : 1 - 1,208 (1,208/1,208)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002354 : Interleukin-4
IPR009079 : Four-helical cytokine-like, core
IPR012351 : Four-helical cytokine, core
GO :
0005136 : Molecular Function : interleukin-4 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031947)
HIX0032398
HIT000529099 (
ENST00000431165
)
(Conserved hypothetical protein.)
genome : 132,025,260 - 132,057,275 (32,016)
query : 7 - 502 (496/502)
2 exons
identity = 0.990
5'(0.981;1.000)3'
coverage = 0.988
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032398)
HIX0032398
HIT000093053
(
BC033341
)
Representative transcript
(Hypothetical short protein.)
genome : 132,025,274 - 132,057,275 (32,002)
query : 1 - 482 (482/507)
2 exons
identity = 0.998
5'(0.996;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032398)
HIX0024788
HIT000360026 (
ENST00000378746
)
(Kinesin-like protein family protein.)
genome : 132,028,320 - 132,073,330 (45,011)
query : 1 - 6,325 (6,325/6,325)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17.3333, cyto 13, cyto_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0024788
HIT000203594 (
NM_007054
)
(Kinesin-like protein family protein.)
genome : 132,028,323 - 132,073,265 (44,943)
query : 1 - 6,257 (6,257/6,257)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17.3333, cyto 13, cyto_plas 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0024788
HIT000052931
(
BC045542
)
(Kinesin-like protein KIF3A; Microtubule plus end-directed kinesin motor 3A;)
genome : 132,031,323 - 132,073,264 (41,942)
query : 1 - 3,265 (3,265/3,292)
17 exons
identity = 0.996
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.935;1.000;1.000;1.000;0.991;0.988;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001752 : Kinesin motor domain
IPR019821 : Kinesin motor domain, conserved site
IPR027640 : Kinesin-like protein
GO :
0003777 : Molecular Function : microtubule motor activity
0005524 : Molecular Function : ATP binding
0005871 : Cellular Component : kinesin complex
0007018 : Biological Process : microtubule-based movement
0008017 : Molecular Function : microtubule binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17.3333, cyto 13, cyto_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0024788
HIT000360015 (
ENST00000378735
)
(Kinesin-like protein family protein.)
genome : 132,031,322 - 132,073,264 (41,943)
query : 1 - 3,266 (3,266/3,266)
17 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.945;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17.3333, cyto 13, cyto_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0024788
HIT000329715
(
AB209780
)
(Kinesin-like protein KIF3A; Microtubule plus end-directed kinesin motor 3A;)
genome : 132,031,969 - 132,073,218 (41,250)
query : 1 - 2,573 (2,573/2,573)
17 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.945;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001752 : Kinesin motor domain
IPR019821 : Kinesin motor domain, conserved site
IPR027640 : Kinesin-like protein
GO :
0003777 : Molecular Function : microtubule motor activity
0005524 : Molecular Function : ATP binding
0005871 : Cellular Component : kinesin complex
0007018 : Biological Process : microtubule-based movement
0008017 : Molecular Function : microtubule binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17.3333, cyto 13, cyto_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0024788
HIT000489713
(
AK295089
)
Representative transcript
(Kinesin-like protein KIF3A.)
genome : 132,031,971 - 132,073,228 (41,258)
query : 1 - 2,653 (2,653/2,653)
18 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.938;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001752 : Kinesin motor domain
IPR019821 : Kinesin motor domain, conserved site
IPR027640 : Kinesin-like protein
GO :
0003777 : Molecular Function : microtubule motor activity
0005524 : Molecular Function : ATP binding
0005871 : Cellular Component : kinesin complex
0007018 : Biological Process : microtubule-based movement
0008017 : Molecular Function : microtubule binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 18, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0024788
HIT000548375 (
ENST00000450441
)
(Kinesin-like protein family protein.)
genome : 132,032,146 - 132,038,726 (6,581)
query : 1 - 738 (738/738)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0024788
HIT000592120 (
ENST00000488471
)
(Conserved hypothetical protein.)
genome : 132,032,240 - 132,035,172 (2,933)
query : 1 - 445 (445/445)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, extr 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0024788
HIT000432225
(
AK313359
)
(Kinesin-like protein KIF3A.)
genome : 132,032,326 - 132,073,238 (40,913)
query : 1 - 2,235 (2,235/2,235)
17 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.945;1.000;0.990;0.993;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001752 : Kinesin motor domain
IPR019821 : Kinesin motor domain, conserved site
IPR027640 : Kinesin-like protein
GO :
0003777 : Molecular Function : microtubule motor activity
0005524 : Molecular Function : ATP binding
0005871 : Cellular Component : kinesin complex
0007018 : Biological Process : microtubule-based movement
0008017 : Molecular Function : microtubule binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17.3333, cyto 13, cyto_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0024788
HIT000063675
(
AF041853
)
(Kinesin-like protein KIF3A; Microtubule plus end-directed kinesin motor 3A;)
genome : 132,032,326 - 132,070,171 (37,846)
query : 6 - 2,109 (2,104/2,109)
16 exons
identity = 0.994
3'(0.980;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;0.926;1.000;1.000;1.000;1.000;0.976;
1.000;1.000)5'
coverage = 0.998
InterPro :
IPR001752 : Kinesin motor domain
IPR019821 : Kinesin motor domain, conserved site
IPR027640 : Kinesin-like protein
GO :
0003777 : Molecular Function : microtubule motor activity
0005524 : Molecular Function : ATP binding
0005871 : Cellular Component : kinesin complex
0007018 : Biological Process : microtubule-based movement
0008017 : Molecular Function : microtubule binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.8333, nucl 17, cyto 14.5,
cyto_plas 8.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0024788
HIT000331469
(
AM177178
)
(Kinesin-like protein KIF3A.)
genome : 132,032,326 - 132,070,171 (37,846)
query : 6 - 2,178 (2,173/2,178)
17 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;0.938;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR001752 : Kinesin motor domain
IPR019821 : Kinesin motor domain, conserved site
IPR027640 : Kinesin-like protein
GO :
0003777 : Molecular Function : microtubule motor activity
0005524 : Molecular Function : ATP binding
0005871 : Cellular Component : kinesin complex
0007018 : Biological Process : microtubule-based movement
0008017 : Molecular Function : microtubule binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 17.3333, cyto 11.5,
cyto_plas 6.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0024788
HIT000504411 (
ENST00000403231
)
(Kinesin-like protein family protein.)
genome : 132,032,326 - 132,070,171 (37,846)
query : 6 - 2,181 (2,176/2,181)
17 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.938;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 18, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0024788
HIT000590775 (
ENST00000487055
)
(Conserved hypothetical protein.)
genome : 132,036,228 - 132,039,302 (3,075)
query : 1 - 731 (731/731)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 9.5, cyto_pero 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0024788
HIT000090281
(
BC020890
)
(Kinesin-like protein family protein.)
genome : 132,039,250 - 132,073,236 (33,987)
query : 1 - 1,414 (1,414/1,443)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR001752 : Kinesin motor domain
IPR019821 : Kinesin motor domain, conserved site
IPR027640 : Kinesin-like protein
GO :
0003777 : Molecular Function : microtubule motor activity
0005524 : Molecular Function : ATP binding
0005871 : Cellular Component : kinesin complex
0007018 : Biological Process : microtubule-based movement
0008017 : Molecular Function : microtubule binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.3333, nucl 16, cyto 14.5, cyto_plas 8.5,
mito_nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0024788
HIT000095830
(
BC039592
)
(Kinesin-like protein family protein.)
genome : 132,046,669 - 132,073,227 (26,559)
query : 1 - 1,326 (1,326/1,342)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001752 : Kinesin motor domain
IPR019821 : Kinesin motor domain, conserved site
IPR027640 : Kinesin-like protein
GO :
0003777 : Molecular Function : microtubule motor activity
0005524 : Molecular Function : ATP binding
0005871 : Cellular Component : kinesin complex
0007018 : Biological Process : microtubule-based movement
0008017 : Molecular Function : microtubule binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 17.1667, nucl 11.5,
cyto_pero 10.5, cyto_plas 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0024788
HIT000092722
(
BC032599
)
(Kinesin-like protein family protein.)
genome : 132,046,669 - 132,073,249 (26,581)
query : 4 - 1,352 (1,349/1,367)
9 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.979)5'
coverage = 0.998
InterPro :
IPR001752 : Kinesin motor domain
IPR019821 : Kinesin motor domain, conserved site
IPR027640 : Kinesin-like protein
GO :
0003777 : Molecular Function : microtubule motor activity
0005524 : Molecular Function : ATP binding
0005871 : Cellular Component : kinesin complex
0007018 : Biological Process : microtubule-based movement
0008017 : Molecular Function : microtubule binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 17.1667, nucl 11.5,
cyto_pero 10.5, cyto_plas 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0024788
HIT000526678 (
ENST00000428744
)
(Kinesin-like protein family protein.)
genome : 132,061,820 - 132,072,620 (10,801)
query : 1 - 658 (658/658)
4 exons
identity = 0.988
3'(1.000;1.000;1.000;0.953)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14, nucl 5.5, extr 4, pero 2,
lyso 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024788)
HIX0184017
pHIT000009599 ( pHIT000009599 )
Representative transcript
(Hypothetical protein.)
genome : 132,073,032 - 132,073,436 (405)
query : 1 - 405 (405/405)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0184017)
CAGE tag :
H28BB14J0505
HIX0032338
HIT000249841
(
AK131553
)
Representative transcript
(Cyclin-I2 family protein.)
genome : 132,083,137 - 132,089,856 (6,720)
query : 2 - 2,356 (2,355/2,356)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR006671 : Cyclin, N-terminal
IPR013763 : Cyclin-like
IPR028861 : Cyclin-I2
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 25, cyto_nucl 17, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032338)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : BX930233
Bos
sp. (Cow) : ENSBTAT00000044241
Canis
sp. (Dog) : ENSCAFT00000036933
Danio
sp. (Zebrafish) : ENSDART00000050533
Macaca
sp. (Macaque) : ENSMMUT00000014410
Oryzias
sp. (Medaka) : ENSORLT00000001568
Pongo
sp. (Orangutan) : ENSPPYT00000018345
Tetraodon
sp. (Tetraodon) : GSTENT00033752001
Takifugu
sp. (Fugu) : SINFRUT00000148117
Pan
sp. (Chimpanzee) : XR_021154
HIX0032338
HIT000360011 (
ENST00000378731
)
(Cyclin-I2 family protein.)
genome : 132,083,137 - 132,089,856 (6,720)
query : 1 - 2,355 (2,355/2,355)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 25, cyto_nucl 17, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032338)
HIX0032338
HIT000366545 (
NM_001039780
)
(Cyclin-I2 family protein.)
genome : 132,083,137 - 132,089,856 (6,720)
query : 1 - 2,355 (2,355/2,355)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 25, cyto_nucl 17, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032338)
HIX0032338
HIT000390890
(
BC132837
)
(Cyclin-I2 family protein.)
genome : 132,083,155 - 132,089,165 (6,011)
query : 1 - 1,646 (1,646/1,646)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006671 : Cyclin, N-terminal
IPR013763 : Cyclin-like
IPR028861 : Cyclin-I2
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 25, cyto_nucl 17, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032338)
HIX0032338
HIT000500820
(
BC136836
)
(Cyclin-I2 family protein.)
genome : 132,083,155 - 132,089,165 (6,011)
query : 1 - 1,646 (1,646/1,646)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006671 : Cyclin, N-terminal
IPR013763 : Cyclin-like
IPR028861 : Cyclin-I2
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 25, cyto_nucl 17, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032338)
HIX0032338
HIT000502828
(
BC144416
)
(Cyclin-I2 family protein.)
genome : 132,083,155 - 132,089,165 (6,011)
query : 1 - 1,649 (1,649/1,649)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006671 : Cyclin, N-terminal
IPR013763 : Cyclin-like
IPR028861 : Cyclin-I2
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 25, cyto_nucl 17, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032338)
HIX0032338
HIT000502829
(
BC144417
)
(Cyclin-I2 family protein.)
genome : 132,083,155 - 132,089,165 (6,011)
query : 1 - 1,694 (1,694/1,694)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006671 : Cyclin, N-terminal
IPR013763 : Cyclin-like
IPR028861 : Cyclin-I2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032338)
HIX0032338
HIT000595674 (
ENST00000492179
)
(Cyclin-I;)
genome : 132,085,062 - 132,086,985 (1,924)
query : 1 - 490 (490/490)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11.5, cyto_nucl 8.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032338)
HIX0005160
HIT000359999 (
ENST00000378719
)
(Septin-8;)
genome : 132,086,509 - 132,113,067 (26,559)
query : 1 - 2,889 (2,889/2,889)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000485303 (
NM_001098811
)
(Septin-8;)
genome : 132,086,509 - 132,113,067 (26,559)
query : 1 - 2,889 (2,889/2,889)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000079696
(
AF440762
)
Representative transcript
(Septin-8;)
genome : 132,086,517 - 132,113,067 (26,551)
query : 1 - 2,881 (2,881/2,881)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170238
Mus
sp. (Mouse) : BC059248
Danio
sp. (Zebrafish) : BC115182
Bos
sp. (Cow) : BC120074
Gallus
sp. (Chicken) : CR406471
Monodelphis
sp. (Opossum) : ENSMODT00000017721
Oryzias
sp. (Medaka) : ENSORLT00000007335
Pongo
sp. (Orangutan) : ENSPPYT00000018346
Rattus
sp. (Rat) : ENSRNOT00000009841
Takifugu
sp. (Fugu) : SINFRUT00000152431
Equus
sp. (Horse) : XM_001504430
Pan
sp. (Chimpanzee) : XM_517927
Canis
sp. (Dog) : XM_531903
HIX0032338
HIT000573285 (
ENST00000468733
)
(Hypothetical short protein.)
genome : 132,086,632 - 132,087,703 (1,072)
query : 1 - 376 (376/376)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 6.5, cyto 5.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032338)
HIX0005160
HIT000585014 (
ENST00000481030
)
(Septin-8 isoform a.)
genome : 132,087,151 - 132,096,563 (9,413)
query : 1 - 790 (790/790)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 12, cyto 2, golg 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000360001 (
ENST00000378721
)
(Septin-8 isoform d.)
genome : 132,089,871 - 132,112,930 (23,060)
query : 1 - 1,723 (1,723/1,723)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 9, mito_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000485305 (
NM_001098813
)
(Septin-8 isoform d.)
genome : 132,091,697 - 132,113,561 (21,865)
query : 1 - 4,270 (4,270/4,270)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 17, nucl 15
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000546867 (
ENST00000448933
)
(Septin-8 isoform d.)
genome : 132,091,697 - 132,113,561 (21,865)
query : 1 - 4,270 (4,270/4,270)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 17, nucl 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000114648 (
ENST00000296873
)
(Septin-8 isoform b.)
genome : 132,091,697 - 132,113,113 (21,417)
query : 1 - 4,390 (4,390/4,390)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000042339
(
D86957
)
(Septin-8 isoform b.)
genome : 132,091,697 - 132,113,067 (21,371)
query : 1 - 4,344 (4,344/4,344)
10 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;0.994;1.000;
0.995;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000072785
(
AF179995
)
(Septin-8 isoform b.)
genome : 132,091,697 - 132,113,067 (21,371)
query : 1 - 4,344 (4,344/4,344)
10 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;0.994;1.000;
0.995;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000485304 (
NM_001098812
)
(Septin-8 isoform c.)
genome : 132,091,697 - 132,113,067 (21,371)
query : 1 - 4,076 (4,076/4,076)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 12, cysk 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000486183 (
NM_015146
)
(Septin-8 isoform b.)
genome : 132,091,697 - 132,113,067 (21,371)
query : 1 - 4,344 (4,344/4,344)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, cysk 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000359986 (
ENST00000378706
)
(Septin-8 isoform b.)
genome : 132,092,025 - 132,113,036 (21,012)
query : 1 - 4,168 (4,168/4,168)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000501513
(
BC140759
)
(Septin-8 isoform d.)
genome : 132,093,503 - 132,112,889 (19,387)
query : 1 - 2,354 (2,354/2,354)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000503510
(
BC171779
)
(Septin-8 isoform d.)
genome : 132,093,503 - 132,112,889 (19,387)
query : 1 - 2,355 (2,355/2,355)
10 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000030323
(
BC001329
)
(Septin-8 isoform d.)
genome : 132,093,835 - 132,099,568 (5,734)
query : 1 - 1,605 (1,605/1,620)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 12.5, cyto_mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000359979 (
ENST00000378699
)
(Septin-8 isoform d.)
genome : 132,093,835 - 132,113,908 (20,074)
query : 1 - 2,289 (2,289/2,289)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 17, nucl 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000079697
(
AF440763
)
(Septin-8 isoform d.)
genome : 132,093,835 - 132,113,470 (19,636)
query : 1 - 2,041 (2,041/2,041)
10 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 17, nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000079695
(
AF440761
)
(Septin-8 isoform b.)
genome : 132,093,835 - 132,113,067 (19,233)
query : 1 - 2,206 (2,206/2,206)
10 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000359981 (
ENST00000378701
)
(Septin-8 isoform d.)
genome : 132,093,836 - 132,112,953 (19,118)
query : 1 - 1,817 (1,817/1,817)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000014404
(
AK057797
)
(Septin-8 isoform b.)
genome : 132,093,836 - 132,112,931 (19,096)
query : 1 - 1,795 (1,795/1,795)
10 exons
identity = 0.996
3'(0.993;0.995;0.992;1.000;1.000;0.994;1.000;
0.995;1.000;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000556422 (
ENST00000458488
)
(Septin-8 isoform c.)
genome : 132,093,892 - 132,112,912 (19,021)
query : 1 - 1,726 (1,726/1,726)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 12, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000352758 (
ENST00000371478
)
(Septin-8 isoform d.)
genome : 132,097,193 - 132,101,166 (3,974)
query : 1 - 737 (737/737)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 24, cyto 5.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000551414 (
ENST00000453480
)
(Septin-8 isoform b.)
genome : 132,098,295 - 132,111,658 (13,364)
query : 1 - 773 (773/773)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, cyto 9, extr 6, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000512528 (
ENST00000414594
)
(Septin-8 isoform b.)
genome : 132,099,461 - 132,113,701 (14,241)
query : 1 - 693 (693/693)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 24, cyto 3.5, extr 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000352773 (
ENST00000371493
)
(Septin-8 isoform b.)
genome : 132,099,516 - 132,142,933 (43,418)
query : 1 - 562 (562/562)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000585757 (
ENST00000481794
)
(Septin-8 isoform b.)
genome : 132,099,653 - 132,112,913 (13,261)
query : 1 - 694 (694/694)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.5, nucl 9, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0005160
HIT000595976 (
ENST00000492490
)
(Conserved hypothetical protein.)
genome : 132,100,083 - 132,112,940 (12,858)
query : 1 - 581 (581/581)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10.5, extr 10, cyto_mito 9.5, cyto_nucl 7.5,
cyto 6.5, cyto_pero 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005160)
HIX0057603
HIT000341851
(
DQ102770
)
Representative transcript
(Non-protein coding transcript.)
genome : 132,111,905 - 132,111,972 (68)
query : 1 - 68 (68/68)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057603)
HIX0005161
HIT000215337 (
NM_175873
)
(Ankyrin repeat domain-containing protein SOWAHA precursor.)
genome : 132,149,033 - 132,152,489 (3,457)
query : 1 - 3,457 (3,457/3,473)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, cyto 6.5, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005161)
HIX0005161
HIT000359973 (
ENST00000378693
)
(Ankyrin repeat domain-containing protein SOWAHA precursor.)
genome : 132,149,033 - 132,152,488 (3,456)
query : 1 - 3,456 (3,456/3,456)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, cyto 6.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005161)
HIX0005161
HIT000337859
(
BC104771
)
(Ankyrin repeat domain-containing protein SOWAHA precursor.)
genome : 132,149,887 - 132,151,031 (1,145)
query : 1 - 1,145 (1,145/1,145)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005161)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : BC151570
Gallus
sp. (Chicken) : CR391256
Canis
sp. (Dog) : ENSCAFT00000001411
Tetraodon
sp. (Tetraodon) : GSTENT00033756001
Takifugu
sp. (Fugu) : SINFRUT00000164996
Rattus
sp. (Rat) : XM_001073996
Macaca
sp. (Macaque) : XM_001104907
Monodelphis
sp. (Opossum) : XM_001371963
Equus
sp. (Horse) : XM_001918233
Pan
sp. (Chimpanzee) : XR_024118
HIX0005161
HIT000337863
(
BC104775
)
(Ankyrin repeat domain-containing protein SOWAHA precursor.)
genome : 132,149,887 - 132,151,031 (1,145)
query : 1 - 1,145 (1,145/1,145)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005161)
HIX0005161
HIT000017649
(
AK092782
)
Representative transcript
(Ankyrin repeat domain-containing protein SOWAHA precursor.)
genome : 132,150,073 - 132,152,478 (2,406)
query : 1 - 2,406 (2,406/2,406)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 12.5, mito 7, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005161)
HIX0005161
HIT000015690
(
AK090823
)
(Ankyrin repeat domain-containing protein SOWAHA precursor.)
genome : 132,150,589 - 132,152,478 (1,890)
query : 1 - 1,891 (1,891/1,891)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005161)
HIX0005162
HIT000096497
(
BC040980
)
(Hypothetical protein.)
genome : 132,157,834 - 132,166,361 (8,528)
query : 3 - 3,353 (3,351/3,380)
2 exons
identity = 0.996
3'(0.982;0.997)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 8, cyto_nucl 7.33333, cyto_pero 2.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005162)
HIX0005162
HIT000654994 (
NM_001172700
)
(Protein Shroom1; Apical protein 2;)
genome : 132,157,834 - 132,166,590 (8,757)
query : 1 - 4,018 (4,018/4,039)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005162)
HIX0005162
HIT000317769 (
NM_133456
)
(Protein Shroom1; Apical protein 2;)
genome : 132,157,834 - 132,162,002 (4,169)
query : 1 - 3,368 (3,368/3,389)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005162)
HIX0005162
HIT000359959 (
ENST00000378679
)
(Protein Shroom1; Apical protein 2;)
genome : 132,157,833 - 132,166,590 (8,758)
query : 1 - 4,019 (4,019/4,019)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005162)
HIX0005162
HIT000001675
(
AB075840
)
Representative transcript
(Protein Shroom1; Apical protein 2;)
genome : 132,157,835 - 132,166,590 (8,756)
query : 1 - 4,017 (4,017/4,017)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005162)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK134332
Bos
sp. (Cow) : BC151639
Gallus
sp. (Chicken) : CR386996
Canis
sp. (Dog) : ENSCAFT00000001419
Equus
sp. (Horse) : ENSECAT00000023196
Oryzias
sp. (Medaka) : ENSORLT00000000751
Pongo
sp. (Orangutan) : ENSPPYT00000018348
Rattus
sp. (Rat) : XM_001073965
Macaca
sp. (Macaque) : XM_001100079
Pan
sp. (Chimpanzee) : XM_527007
Danio
sp. (Zebrafish) : XM_682698
HIX0005162
HIT000077095
(
AF314142
)
(Protein Shroom1; Apical protein 2;)
genome : 132,158,012 - 132,162,002 (3,991)
query : 1 - 3,190 (3,190/3,190)
7 exons
identity = 0.999
3'(1.000;0.996;1.000;0.998;1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR014799 : Apx/Shrm Domain 2
IPR014800 : Apx/Shrm Domain 1
IPR027685 : Shroom family
GO :
0000902 : Biological Process : cell morphogenesis
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005162)
HIX0005162
HIT000122216 (
ENST00000319854
)
(Protein Shroom1; Apical protein 2;)
genome : 132,158,012 - 132,162,002 (3,991)
query : 1 - 3,190 (3,190/3,190)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005162)
HIX0005162
HIT000338002
(
BC104914
)
(Protein Shroom1; Apical protein 2;)
genome : 132,158,466 - 132,161,864 (3,399)
query : 1 - 2,613 (2,613/2,613)
7 exons
identity = 1.000
3'(1.000;1.000;0.993;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR014799 : Apx/Shrm Domain 2
IPR014800 : Apx/Shrm Domain 1
IPR027685 : Shroom family
GO :
0000902 : Biological Process : cell morphogenesis
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005162)
HIX0005162
HIT000338004
(
BC104916
)
(Protein Shroom1; Apical protein 2;)
genome : 132,158,466 - 132,161,864 (3,399)
query : 1 - 2,613 (2,613/2,613)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR014799 : Apx/Shrm Domain 2
IPR014800 : Apx/Shrm Domain 1
IPR027685 : Shroom family
GO :
0000902 : Biological Process : cell morphogenesis
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005162)
HIX0005162
HIT000501947
(
BC143494
)
(Protein Shroom1; Apical protein 2;)
genome : 132,158,467 - 132,161,864 (3,398)
query : 1 - 2,612 (2,612/2,612)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR014799 : Apx/Shrm Domain 2
IPR014800 : Apx/Shrm Domain 1
IPR027685 : Shroom family
GO :
0000902 : Biological Process : cell morphogenesis
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005162)
HIX0005162
HIT000359956 (
ENST00000378676
)
(Protein Shroom1 isoform 2.)
genome : 132,158,488 - 132,161,832 (3,345)
query : 1 - 2,352 (2,352/2,352)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 5.5, extr 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005162)
HIX0005162
HIT000591735 (
ENST00000488072
)
(Protein Shroom1 isoform 2.)
genome : 132,158,975 - 132,159,497 (523)
query : 1 - 423 (423/423)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, cyto 7.5, cyto_nucl 7.5, extr 7, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005162)
HIX0005162
HIT000599039 (
ENST00000495680
)
(Protein Shroom1 isoform 2.)
genome : 132,159,731 - 132,160,113 (383)
query : 1 - 283 (283/283)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 12, nucl 11.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005162)
HIX0005162
HIT000538052 (
ENST00000440118
)
(Protein Shroom1 isoform 2.)
genome : 132,160,861 - 132,166,351 (5,491)
query : 1 - 1,080 (1,080/1,080)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 18, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005162)
HIX0121022
HIT000346010 (
ENST00000364404
)
(Non-protein coding transcript.)
genome : 132,184,269 - 132,184,388 (120)
query : 1 - 120 (120/120)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0121022)
HIX0032123
HIT000359953 (
ENST00000378673
)
(Growth/differentiation factor 9; GDF-9; Precursor;)
genome : 132,196,873 - 132,202,329 (5,457)
query : 1 - 2,640 (2,640/2,640)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 2, lyso 2, golg 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032123)
HIX0032123
HIT000114649 (
ENST00000296875
)
(Growth/differentiation factor 9; GDF-9; Precursor;)
genome : 132,196,878 - 132,200,477 (3,600)
query : 1 - 2,020 (2,020/2,020)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 2, lyso 2, golg 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032123)
HIX0032123
HIT000201965 (
NM_005260
)
(Growth/differentiation factor 9; GDF-9; Precursor;)
genome : 132,196,878 - 132,200,477 (3,600)
query : 1 - 2,020 (2,020/2,020)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 2, lyso 2, golg 2, E.R._golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032123)
HIX0032123
HIT000496586
(
AK301962
)
(Growth/differentiation factor 9; GDF-9; Precursor;)
genome : 132,197,075 - 132,202,238 (5,164)
query : 1 - 1,567 (1,567/1,567)
4 exons
identity = 0.999
3'(1.000;1.000;0.995;1.000)5'
coverage = 1.000
InterPro :
IPR001839 : Transforming growth factor-beta, C-terminal
IPR015615 : Transforming growth factor-beta-related
IPR015617 : Growth differentiation factor-9
IPR017948 : Transforming growth factor beta, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032123)
HIX0032123
HIT000499586
(
AK315973
)
(Growth/differentiation factor 9; GDF-9; Precursor;)
genome : 132,197,122 - 132,202,576 (5,455)
query : 1 - 1,577 (1,577/1,577)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001839 : Transforming growth factor-beta, C-terminal
IPR015615 : Transforming growth factor-beta-related
IPR015617 : Growth differentiation factor-9
IPR017948 : Transforming growth factor beta, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13.5, cyto 9.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032123)
HIX0032123
HIT000335516
(
BC096228
)
(Growth/differentiation factor 9; GDF-9; Precursor;)
genome : 132,197,281 - 132,200,225 (2,945)
query : 1 - 1,365 (1,365/1,365)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR001839 : Transforming growth factor-beta, C-terminal
IPR015615 : Transforming growth factor-beta-related
IPR015617 : Growth differentiation factor-9
IPR017948 : Transforming growth factor beta, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 2, lyso 2, golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032123)
HIX0032123
HIT000335517
(
BC096229
)
(Growth/differentiation factor 9; GDF-9; Precursor;)
genome : 132,197,281 - 132,200,225 (2,945)
query : 1 - 1,365 (1,365/1,365)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR001839 : Transforming growth factor-beta, C-terminal
IPR015615 : Transforming growth factor-beta-related
IPR015617 : Growth differentiation factor-9
IPR017948 : Transforming growth factor beta, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 2, lyso 2, golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032123)
HIX0032123
HIT000335518
(
BC096230
)
(Growth/differentiation factor 9; GDF-9; Precursor;)
genome : 132,197,281 - 132,200,225 (2,945)
query : 1 - 1,365 (1,365/1,365)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR001839 : Transforming growth factor-beta, C-terminal
IPR015615 : Transforming growth factor-beta-related
IPR015617 : Growth differentiation factor-9
IPR017948 : Transforming growth factor beta, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 2, lyso 2, golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032123)
HIX0032123
HIT000335519
(
BC096231
)
Representative transcript
(Growth/differentiation factor 9; GDF-9; Precursor;)
genome : 132,197,281 - 132,200,225 (2,945)
query : 1 - 1,365 (1,365/1,365)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001839 : Transforming growth factor-beta, C-terminal
IPR015615 : Transforming growth factor-beta-related
IPR015617 : Growth differentiation factor-9
IPR017948 : Transforming growth factor beta, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 2, lyso 2, golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032123)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF099912
Bos
sp. (Cow) : AF307092
Gallus
sp. (Chicken) : AY566700
Danio
sp. (Zebrafish) : AY833104
Mus
sp. (Mouse) : BC052667
Canis
sp. (Dog) : ENSCAFT00000001420
Equus
sp. (Horse) : ENSECAT00000022433
Oryzias
sp. (Medaka) : ENSORLT00000007343
Pongo
sp. (Orangutan) : ENSPPYT00000018349
Tetraodon
sp. (Tetraodon) : GSTENT00017021001
Takifugu
sp. (Fugu) : SINFRUT00000152429
Monodelphis
sp. (Opossum) : XM_001371982
Pan
sp. (Chimpanzee) : XM_527008
HIX0032123
HIT000569130 (
ENST00000464378
)
(Growth/differentiation factor 9; GDF-9; Precursor;)
genome : 132,198,076 - 132,202,238 (4,163)
query : 1 - 566 (566/566)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 10.5, extr 10, cyto 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032123)
HIX0032123
HIT000576701 (
ENST00000472320
)
(Growth/differentiation factor 9; GDF-9; Precursor;)
genome : 132,198,158 - 132,202,576 (4,419)
query : 1 - 541 (541/541)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 9.5, E.R._mito 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032123)
HIX0032035
HIT000359950 (
ENST00000378670
)
(Cytochrome b-c1 complex subunit 8; Complex III subunit 8; Complex III subunit VIII; Ubiquinol-cytochrome c reductase complex 9.5 kDa protein; Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C;)
genome : 132,202,252 - 132,203,723 (1,472)
query : 1 - 839 (839/839)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, cyto_nucl 4.5, cyto 4, nucl 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032035)
HIX0032035
HIT000204779 (
NM_014402
)
(Cytochrome b-c1 complex subunit 8; Complex III subunit 8; Complex III subunit VIII; Ubiquinol-cytochrome c reductase complex 9.5 kDa protein; Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C;)
genome : 132,202,319 - 132,204,536 (2,218)
query : 1 - 1,585 (1,585/1,585)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.10.2.2
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, cyto_nucl 4.5, cyto 4, nucl 3, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032035)
HIX0032035
HIT000359947 (
ENST00000378667
)
(Cytochrome b-c1 complex subunit 8; Complex III subunit 8; Complex III subunit VIII; Ubiquinol-cytochrome c reductase complex 9.5 kDa protein; Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C;)
genome : 132,202,322 - 132,203,379 (1,058)
query : 1 - 429 (429/429)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, cyto_nucl 4.5, cyto 4, nucl 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032035)
HIX0032035
HIT000601535 (
ENST00000498309
)
(Cytochrome b-c1 complex subunit 8; Complex III subunit 8; Complex III subunit VIII; Ubiquinol-cytochrome c reductase complex 9.5 kDa protein; Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C;)
genome : 132,202,325 - 132,203,379 (1,055)
query : 1 - 874 (874/874)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 7.5, cyto_nucl 7, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032035)
HIX0032035
HIT000491685
(
AK297061
)
(Cytochrome b-c1 complex subunit 8; Complex III subunit 8; Complex III subunit VIII; Ubiquinol-cytochrome c reductase complex 9.5 kDa protein; Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C;)
genome : 132,202,334 - 132,204,226 (1,893)
query : 1 - 1,712 (1,712/1,712)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
InterPro :
IPR004205 : Cytochrome b-c1 complex subunit 8
GO :
0008121 : Molecular Function : ubiquinol-cytochrome-c reductase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 7.5, cyto_nucl 7, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032035)
HIX0032035
HIT000599750 (
ENST00000496429
)
(Non-protein coding transcript.)
genome : 132,202,334 - 132,203,391 (1,058)
query : 1 - 258 (258/258)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032035)
HIX0032035
HIT000359945 (
ENST00000378665
)
(Cytochrome b-c1 complex subunit 8; Complex III subunit 8; Complex III subunit VIII; Ubiquinol-cytochrome c reductase complex 9.5 kDa protein; Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C;)
genome : 132,202,338 - 132,203,375 (1,038)
query : 1 - 586 (586/586)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, cyto_nucl 4.5, cyto 4, nucl 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032035)
HIX0032035
HIT000266308
(
BC090048
)
Representative transcript
(Cytochrome b-c1 complex subunit 8; Complex III subunit 8; Complex III subunit VIII; Ubiquinol-cytochrome c reductase complex 9.5 kDa protein; Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C;)
genome : 132,202,342 - 132,203,379 (1,038)
query : 1 - 405 (405/462)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004205 : Cytochrome b-c1 complex subunit 8
GO :
0008121 : Molecular Function : ubiquinol-cytochrome-c reductase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, cyto_nucl 4.5, cyto 4, nucl 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032035)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK003160
Rattus
sp. (Rat) : AY323237
Danio
sp. (Zebrafish) : BC076310
Bos
sp. (Cow) : BC103110
Gallus
sp. (Chicken) : BX933197
Pongo
sp. (Orangutan) : CR860967
Oryzias
sp. (Medaka) : ENSORLT00000007355
Pan
sp. (Chimpanzee) : ENSPTRT00000031894
Tetraodon
sp. (Tetraodon) : GSTENT00017022001
Takifugu
sp. (Fugu) : SINFRUT00000152428
Macaca
sp. (Macaque) : XM_001105221
Monodelphis
sp. (Opossum) : XM_001366209
Canis
sp. (Dog) : XM_847071
HIX0032035
HIT000261656
(
BC064949
)
(Cytochrome b-c1 complex subunit 8; Complex III subunit 8; Complex III subunit VIII; Ubiquinol-cytochrome c reductase complex 9.5 kDa protein; Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C;)
genome : 132,202,345 - 132,203,377 (1,033)
query : 1 - 400 (400/455)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR004205 : Cytochrome b-c1 complex subunit 8
GO :
0008121 : Molecular Function : ubiquinol-cytochrome-c reductase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, cyto_nucl 4.5, cyto 4, nucl 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032035)
HIX0032035
HIT000431014
(
AK312148
)
(Cytochrome b-c1 complex subunit 8; Complex III subunit 8; Complex III subunit VIII; Ubiquinol-cytochrome c reductase complex 9.5 kDa protein; Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C;)
genome : 132,202,349 - 132,203,308 (960)
query : 1 - 327 (327/327)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004205 : Cytochrome b-c1 complex subunit 8
GO :
0008121 : Molecular Function : ubiquinol-cytochrome-c reductase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, cyto_nucl 4.5, cyto 4, nucl 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032035)
HIX0032035
HIT000584394 (
ENST00000480372
)
(Cytochrome b-c1 complex subunit 8; Complex III subunit 8; Complex III subunit VIII; Ubiquinol-cytochrome c reductase complex 9.5 kDa protein; Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C;)
genome : 132,202,349 - 132,203,034 (686)
query : 1 - 509 (509/509)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 7.5, cyto_nucl 7, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032035)
HIX0032035
HIT000030373
(
BC001390
)
(Cytochrome b-c1 complex subunit 8; Complex III subunit 8; Complex III subunit VIII; Ubiquinol-cytochrome c reductase complex 9.5 kDa protein; Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C;)
genome : 132,202,561 - 132,203,379 (819)
query : 15 - 381 (367/400)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.963
InterPro :
IPR004205 : Cytochrome b-c1 complex subunit 8
GO :
0008121 : Molecular Function : ubiquinol-cytochrome-c reductase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, cyto_nucl 4.5, cyto 4, nucl 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032035)
HIX0031976
HIT000114651 (
ENST00000296877
)
(Liver-expressed antimicrobial peptide 2; LEAP-2; Precursor;)
genome : 132,208,014 - 132,210,723 (2,710)
query : 1 - 2,192 (2,192/2,207)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031976)
HIX0031976
HIT000247548
(
AJ409065
)
Representative transcript
(Liver-expressed antimicrobial peptide 2; LEAP-2; Precursor;)
genome : 132,208,014 - 132,210,387 (2,374)
query : 1 - 1,856 (1,856/1,856)
3 exons
identity = 0.998
5'(0.998;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009955 : Liver-expressed antimicrobial peptide 2
GO :
0042742 : Biological Process : defense response to bacterium
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031976)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC089593
Bos
sp. (Cow) : BC108204
Gallus
sp. (Chicken) : BX932651
Canis
sp. (Dog) : ENSCAFT00000001428
Equus
sp. (Horse) : ENSECAT00000022210
Pongo
sp. (Orangutan) : ENSPPYT00000018351
Danio
sp. (Zebrafish) : NM_001128777
Macaca
sp. (Macaque) : XM_001105506
Pan
sp. (Chimpanzee) : XM_001164115
Monodelphis
sp. (Opossum) : XM_001372004
HIX0031976
HIT000071244
(
AF143867
)
(Liver-expressed antimicrobial peptide 2; LEAP-2; Precursor;)
genome : 132,209,136 - 132,210,388 (1,253)
query : 12 - 945 (934/963)
2 exons
identity = 0.998
5'(0.997;1.000)3'
coverage = 0.988
InterPro :
IPR009955 : Liver-expressed antimicrobial peptide 2
GO :
0042742 : Biological Process : defense response to bacterium
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15, nucl 10.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031976)
HIX0031976
HIT000587091 (
ENST00000483190
)
(Liver-expressed antimicrobial peptide 2; LEAP-2; Precursor;)
genome : 132,209,136 - 132,210,390 (1,255)
query : 1 - 935 (935/935)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 12, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031976)
HIX0031976
HIT000211563 (
NM_052971
)
(Liver-expressed antimicrobial peptide 2; LEAP-2; Precursor;)
genome : 132,209,358 - 132,210,582 (1,225)
query : 1 - 707 (707/707)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031976)
HIX0031976
HIT000246930
(
AJ306405
)
(Liver-expressed antimicrobial peptide 2; LEAP-2; Precursor;)
genome : 132,209,358 - 132,210,387 (1,030)
query : 1 - 512 (512/512)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009955 : Liver-expressed antimicrobial peptide 2
GO :
0042742 : Biological Process : defense response to bacterium
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031976)
HIX0031976
HIT000250667
(
AY052782
)
(Liver-expressed antimicrobial peptide 2 precursor.)
genome : 132,209,358 - 132,210,387 (1,030)
query : 1 - 458 (458/458)
3 exons
identity = 0.998
5'(1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR009955 : Liver-expressed antimicrobial peptide 2
GO :
0042742 : Biological Process : defense response to bacterium
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031976)
HIX0031976
HIT000589261 (
ENST00000485457
)
(Liver-expressed antimicrobial peptide 2 precursor.)
genome : 132,209,358 - 132,210,387 (1,030)
query : 1 - 457 (457/457)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031976)
HIX0031976
HIT000264157
(
BC070199
)
(Liver-expressed antimicrobial peptide 2; LEAP-2; Precursor;)
genome : 132,209,360 - 132,210,382 (1,023)
query : 1 - 505 (505/536)
3 exons
identity = 0.998
5'(1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR009955 : Liver-expressed antimicrobial peptide 2
GO :
0042742 : Biological Process : defense response to bacterium
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031976)
HIX0216292
HIT000242791
(
AF173886
)
Representative transcript
(Hypothetical protein.)
genome : 132,211,089 - 132,212,661 (1,573)
query : 1 - 1,573 (1,573/1,591)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, cyto 8, nucl 4, cyto_pero 4, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216292)
HIX0216292
HIT000046691
(
AK126818
)
(Hypothetical protein.)
genome : 132,211,090 - 132,212,540 (1,451)
query : 1 - 1,451 (1,451/1,451)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, cyto 8, nucl 4, cyto_pero 4, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216292)
HIX0005164
HIT000501180
(
BC137226
)
Representative transcript
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,213,616 - 132,299,252 (85,637)
query : 1 - 6,933 (6,933/6,933)
21 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17.8333, cyto 5.5, cyto_golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168392
Mus
sp. (Mouse) : AF190449
Danio
sp. (Zebrafish) : BC129451
Canis
sp. (Dog) : ENSCAFT00000001440
Oryzias
sp. (Medaka) : ENSORLT00000001685
Pongo
sp. (Orangutan) : ENSPPYT00000018352
Tetraodon
sp. (Tetraodon) : GSTENT00033758001
Takifugu
sp. (Fugu) : SINFRUT00000162288
Bos
sp. (Cow) : XM_001249664
Monodelphis
sp. (Opossum) : XM_001366265
Equus
sp. (Horse) : XM_001504421
Rattus
sp. (Rat) : XM_220420
Gallus
sp. (Chicken) : XM_414653
Pan
sp. (Chimpanzee) : XM_517928
HIX0005164
HIT000502946
(
BC144538
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,213,621 - 132,299,252 (85,632)
query : 1 - 6,945 (6,945/6,945)
21 exons
identity = 0.999
3'(1.000;1.000;0.977;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.960;0.941;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 9.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000074107
(
AF213987
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,214,450 - 132,299,011 (84,562)
query : 1 - 5,858 (5,858/5,858)
21 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.988;1.000;0.982;
1.000;0.973;1.000;1.000;0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17.8333, cyto 5.5, cyto_golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000073689
(
AF197927
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,216,345 - 132,299,282 (82,938)
query : 1 - 4,235 (4,235/4,235)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17.8333, cyto 5.5, cyto_golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000329482
(
AB209547
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,227,509 - 132,299,310 (71,802)
query : 1 - 3,348 (3,348/3,348)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 17.3333, cyto 5.5, cyto_golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000359875 (
ENST00000378595
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,227,509 - 132,299,310 (71,802)
query : 1 - 3,348 (3,348/3,348)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 17.3333, cyto 5.5, cyto_golg 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000072085
(
AF161355
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,227,519 - 132,228,758 (1,240)
query : 1 - 615 (615/619)
2 exons
identity = 0.995
3'(0.995;1.000)5'
coverage = 0.994
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, extr 11, mito 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000008105
(
AK024831
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,232,447 - 132,270,622 (38,176)
query : 1 - 1,741 (1,741/1,757)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)5'
coverage = 1.000
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 15.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000426273
(
AK307407
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,232,448 - 132,299,354 (66,907)
query : 1 - 2,282 (2,282/2,282)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, cyto 14.5, nucl 13,
cyto_golg 9.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000012252
(
AK055638
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,232,448 - 132,299,302 (66,855)
query : 1 - 2,230 (2,230/2,230)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999;0.992;1.000)5'
coverage = 1.000
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, cyto 14.5, nucl 13,
cyto_golg 9.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000582685 (
ENST00000478588
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,232,503 - 132,236,774 (4,272)
query : 1 - 897 (897/897)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000523592 (
ENST00000425658
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,232,896 - 132,269,930 (37,035)
query : 1 - 513 (513/513)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11.5, cyto 8.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000359873 (
ENST00000378593
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,232,896 - 132,269,923 (37,028)
query : 1 - 430 (430/430)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 9.5, cyto_nucl 7.5, mito 5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000581518 (
ENST00000477369
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,233,975 - 132,263,254 (29,280)
query : 1 - 728 (728/728)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 8, mito 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000039968
(
BC025700
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,239,554 - 132,299,206 (59,653)
query : 1 - 1,666 (1,666/1,753)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.5, nucl 8, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000595344 (
ENST00000491831
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,239,553 - 132,299,206 (59,654)
query : 1 - 1,667 (1,667/1,667)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.5, nucl 8, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000336177
(
BC100287
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,240,062 - 132,299,306 (59,245)
query : 1 - 1,445 (1,445/1,459)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000260717
(
BC063007
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,262,418 - 132,299,205 (36,788)
query : 1 - 1,704 (1,704/1,733)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13, nucl 7, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000570179 (
ENST00000465484
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,262,418 - 132,299,205 (36,788)
query : 1 - 1,704 (1,704/1,729)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13, nucl 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000054370
(
BX537585
)
(Conserved hypothetical protein.)
genome : 132,262,418 - 132,266,237 (3,820)
query : 1 - 3,820 (3,820/3,839)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 5, nucl 3.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0005164
HIT000519707 (
ENST00000421773
)
(AF4/FMR2 family member 4; ALL1-fused gene from chromosome 5q31 protein; Protein AF-5q31; Major CDK9 elongation factor-associated protein;)
genome : 132,270,312 - 132,273,432 (3,121)
query : 1 - 541 (541/541)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, nucl 8.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0183573
HIT000048942
(
AK129671
)
Representative transcript
(Elongation factor 1-alpha 2.)
genome : 132,278,173 - 132,279,864 (1,692)
query : 1 - 1,692 (1,692/1,692)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
InterPro :
IPR004160 : Translation elongation factor EFTu/EF1A, C-terminal
IPR009000 : Translation protein, beta-barrel domain
IPR009001 : Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
GO :
0005525 : Molecular Function : GTP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 9, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0183573)
HIX0183573
HIT000543297 (
ENST00000445363
)
(Elongation factor 1-alpha 2.)
genome : 132,278,624 - 132,280,742 (2,119)
query : 1 - 1,205 (1,205/1,205)
2 exons
identity = 0.996
5'(0.996;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, extr 12, cyto_mito 9, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0183573)
HIX0164580
HIT000510471 (
ENST00000412537
)
(Conserved hypothetical protein.)
genome : 132,284,185 - 132,284,410 (226)
query : 1 - 226 (226/226)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164580)
HIX0024923
HIT000048992
(
AK129721
)
Representative transcript
(Conserved hypothetical protein.)
genome : 132,294,837 - 132,297,278 (2,442)
query : 1 - 2,441 (2,441/2,441)
1 exon
identity = 0.977
3'(0.977)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, cyto 6, mito 5, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024923)
HIX0005164
HIT000096175
(
BC040454
)
(Non-protein coding transcript.)
genome : 132,298,761 - 132,299,302 (542)
query : 1 - 542 (542/571)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005164)
HIX0183565
HIT000527540 (
ENST00000429606
)
(Domain of unknown function DUF1777 domain containing protein.)
genome : 132,323,344 - 132,323,802 (459)
query : 1 - 459 (459/459)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 15, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0183565)
HIX0005165
HIT000002576
(
AK000101
)
(Zinc finger CCHC domain-containing protein 10.)
genome : 132,332,679 - 132,362,240 (29,562)
query : 1 - 2,120 (2,120/2,136)
4 exons
identity = 1.000
3'(1.000;1.000;0.994;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0005165
HIT000206543 (
NM_017665
)
(Zinc finger CCHC domain-containing protein 10.)
genome : 132,332,679 - 132,362,240 (29,562)
query : 1 - 2,120 (2,120/2,136)
4 exons
identity = 1.000
3'(1.000;1.000;0.994;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0005165
HIT000123757 (
ENST00000324170
)
(Zinc finger CCHC domain-containing protein 10.)
genome : 132,332,677 - 132,362,296 (29,620)
query : 1 - 2,178 (2,178/2,178)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0005165
HIT000042843
(
AK122970
)
(Zinc finger CCHC domain-containing protein 10.)
genome : 132,332,688 - 132,362,241 (29,554)
query : 1 - 2,160 (2,160/2,160)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;0.985;1.000)5'
coverage = 1.000
InterPro :
IPR001878 : Zinc finger, CCHC-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, mito_nucl 16.5, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0005165
HIT000309523 (
ENST00000355372
)
(Zinc finger CCHC domain-containing protein 10.)
genome : 132,332,688 - 132,362,241 (29,554)
query : 1 - 2,160 (2,160/2,160)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, mito_nucl 16.5, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0005165
HIT000039542
(
BC022443
)
Representative transcript
(Zinc finger CCHC domain-containing protein 10.)
genome : 132,333,789 - 132,362,237 (28,449)
query : 1 - 1,073 (1,073/1,102)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001878 : Zinc finger, CCHC-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, mito_nucl 16.5, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169396
Mus
sp. (Mouse) : AK010803
Rattus
sp. (Rat) : AY387053
Danio
sp. (Zebrafish) : BC134199
Bos
sp. (Cow) : BT030697
Gallus
sp. (Chicken) : BX929889
Equus
sp. (Horse) : ENSECAT00000028971
Monodelphis
sp. (Opossum) : ENSMODT00000017603
Oryzias
sp. (Medaka) : ENSORLT00000001696
Pongo
sp. (Orangutan) : ENSPPYT00000018353
Pan
sp. (Chimpanzee) : XM_517929
Canis
sp. (Dog) : XM_531905
HIX0005165
HIT000032292
(
BC005211
)
(Zinc finger CCHC domain-containing protein 10.)
genome : 132,333,801 - 132,362,253 (28,453)
query : 1 - 1,011 (1,011/1,039)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001878 : Zinc finger, CCHC-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0005165
HIT000609302 (
ENST00000509437
)
(Zinc finger CCHC domain-containing protein 10.)
genome : 132,333,792 - 132,362,237 (28,446)
query : 1 - 1,070 (1,070/1,070)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, mito_nucl 16.5, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0005165
HIT000495167
(
AK300543
)
(Zinc finger CCHC domain-containing protein 10.)
genome : 132,333,904 - 132,362,263 (28,360)
query : 2 - 877 (876/877)
3 exons
identity = 0.997
3'(0.995;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001878 : Zinc finger, CCHC-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0005165
HIT000613390 (
ENST00000513848
)
(Zinc finger CCHC domain-containing protein 10.)
genome : 132,333,904 - 132,362,263 (28,360)
query : 1 - 876 (876/876)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0005165
HIT000613103 (
ENST00000513541
)
(Zinc finger CCHC domain-containing protein 10.)
genome : 132,334,100 - 132,362,241 (28,142)
query : 1 - 794 (794/794)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14, cyto 7.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0005165
HIT000608034 (
ENST00000508080
)
(Zinc finger CCHC domain-containing protein 10.)
genome : 132,334,105 - 132,362,226 (28,122)
query : 1 - 712 (712/712)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0005165
HIT000608900 (
ENST00000509008
)
(Zinc finger CCHC domain-containing protein 10.)
genome : 132,334,220 - 132,362,241 (28,022)
query : 1 - 608 (608/608)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0005165
HIT000067325
(
AF086446
)
(Zinc finger CCHC domain-containing protein 10.)
genome : 132,334,296 - 132,342,602 (8,307)
query : 1 - 441 (441/450)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001878 : Zinc finger, CCHC-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 13.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0005165
HIT000606467 (
ENST00000506403
)
(Zinc finger CCHC domain-containing protein 10.)
genome : 132,334,309 - 132,362,241 (27,933)
query : 1 - 608 (608/608)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 6, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0005165
HIT000611159 (
ENST00000511440
)
(Zinc finger CCHC domain-containing protein 10.)
genome : 132,334,397 - 132,362,237 (27,841)
query : 1 - 548 (548/548)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 2, cyto 2, mito 2, cyto_nucl 2,
cyto_mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0206646
HIT000605189 (
ENST00000505029
)
(NADH-ubiquinone reductase complex 1 MLRQ subunit family protein.)
genome : 132,338,811 - 132,339,057 (247)
query : 1 - 247 (247/247)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206646)
HIX0005165
HIT000088883
(
BC015986
)
(Conserved hypothetical protein.)
genome : 132,354,744 - 132,362,237 (7,494)
query : 5 - 271 (267/298)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.985
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto_nucl 4.5, nucl 3.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0005165
HIT000604409 (
ENST00000504170
)
(Conserved hypothetical protein.)
genome : 132,354,739 - 132,362,281 (7,543)
query : 1 - 316 (316/316)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto_nucl 4.5, nucl 3.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005165)
HIX0005166
HIT000116871 (
ENST00000304858
)
(Heat shock 70 kDa protein 4; HSP70RY; Heat shock 70-related protein APG-2;)
genome : 132,387,654 - 132,442,141 (54,488)
query : 1 - 4,825 (4,825/4,825)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 11.5, pero 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000316944 (
NM_002154
)
(Heat shock 70 kDa protein 4; HSP70RY; Heat shock 70-related protein APG-2;)
genome : 132,387,662 - 132,440,709 (53,048)
query : 1 - 3,385 (3,385/3,385)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 11.5, pero 2, cysk 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000058763
(
AB023420
)
(Heat shock protein 70 family protein.)
genome : 132,387,670 - 132,440,166 (52,497)
query : 7 - 2,839 (2,833/2,839)
19 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.984;0.991;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 11.5, pero 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000388714
(
BC126122
)
(Heat shock 70 kDa protein 4; HSP70RY; Heat shock 70-related protein APG-2;)
genome : 132,387,701 - 132,440,267 (52,567)
query : 1 - 2,904 (2,904/2,904)
19 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 11.5, pero 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000388716
(
BC126124
)
Representative transcript
(Heat shock 70 kDa protein 4; HSP70RY; Heat shock 70-related protein APG-2;)
genome : 132,387,701 - 132,440,267 (52,567)
query : 1 - 2,904 (2,904/2,904)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 11.5, pero 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF077354
Mus
sp. (Mouse) : AK220167
Canis
sp. (Dog) : AY911512
Danio
sp. (Zebrafish) : BC065970
Danio
sp. (Zebrafish) : ENSDART00000021037
Monodelphis
sp. (Opossum) : ENSMODT00000017597
Oryzias
sp. (Medaka) : ENSORLT00000007500
Pongo
sp. (Orangutan) : ENSPPYT00000018354
Bos
sp. (Cow) : NM_001114192
Takifugu
sp. (Fugu) : SINFRUT00000152426
Macaca
sp. (Macaque) : XM_001106968
Pan
sp. (Chimpanzee) : XM_001165593
Equus
sp. (Horse) : XM_001918224
HIX0005166
HIT000329086
(
AB209151
)
(Heat shock 70 kDa protein 4.)
genome : 132,387,741 - 132,439,678 (51,938)
query : 1 - 2,481 (2,481/2,481)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, cyto_mito 14.1667, cyto_nucl 5.83333,
cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000030965
(
BC002526
)
(Heat shock 70 kDa protein 4.)
genome : 132,387,743 - 132,440,164 (52,422)
query : 1 - 683 (683/706)
4 exons
identity = 0.985
5'(1.000;1.000;1.000;0.944)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, cyto_pero 12, mito 5.5,
E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000489483
(
AK294859
)
(Heat shock 70 kDa protein 4; HSP70RY; Heat shock 70-related protein APG-2;)
genome : 132,387,747 - 132,440,335 (52,589)
query : 1 - 2,926 (2,926/2,926)
19 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;0.990;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 11.5, pero 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000339752
(
BC110861
)
(Heat shock 70 kDa protein 4; HSP70RY; Heat shock 70-related protein APG-2;)
genome : 132,387,813 - 132,440,164 (52,352)
query : 12 - 2,700 (2,689/2,726)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 11.5, pero 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000192180
(
L12723
)
(Heat shock protein 70 family protein.)
genome : 132,387,876 - 132,439,641 (51,766)
query : 66 - 2,387 (2,322/2,391)
18 exons
identity = 0.991
5'(0.994;1.000;0.993;1.000;1.000;0.985;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.987;
1.000;1.000;0.915;0.955)3'
coverage = 0.971
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.8333, nucl 11.5,
cyto_pero 10.3333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000429963
(
AK311097
)
(Heat shock 70 kDa protein 4.)
genome : 132,387,931 - 132,422,513 (34,583)
query : 1 - 960 (960/960)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 10, cyto_pero 9, cyto_nucl 9, mito 5,
extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000322868
(
X67643
)
(Heat shock 70 kDa protein 4.)
genome : 132,387,933 - 132,439,601 (51,669)
query : 1 - 2,204 (2,204/2,221)
18 exons
identity = 0.994
5'(0.983;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.956;0.994;0.978;0.994;
0.992;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, cyto_pero 10.3333, nucl 5.5,
mito 2.5, extr 2, lyso 2, golg 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000100295
(
BT007375
)
(Heat shock 70 kDa protein 4.)
genome : 132,387,943 - 132,440,126 (52,184)
query : 1 - 445 (445/447)
4 exons
identity = 0.978
5'(1.000;1.000;1.000;0.928)3'
coverage = 0.996
InterPro :
IPR013126 : Heat shock protein 70 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, cyto_pero 12, mito 5.5,
E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000495394
(
AK300770
)
(Heat shock 70 kDa protein 4.)
genome : 132,400,670 - 132,440,163 (39,494)
query : 55 - 2,507 (2,453/2,507)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.978
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 13.8333, nucl 4.5,
cyto_nucl 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000430349
(
AK311483
)
(Heat shock 70 kDa protein 4.)
genome : 132,403,192 - 132,424,825 (21,634)
query : 1 - 968 (968/968)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 14, nucl 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000490471
(
AK295847
)
(Heat shock 70 kDa protein 4.)
genome : 132,406,094 - 132,440,254 (34,161)
query : 1 - 2,315 (2,315/2,315)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.987;1.000;1.000;
1.000;1.000;1.000;1.000;0.992;1.000;0.992;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14, nucl 10, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000430337
(
AK311471
)
(Heat shock 70 kDa protein 4.)
genome : 132,406,127 - 132,424,853 (18,727)
query : 1 - 877 (877/896)
7 exons
identity = 0.998
5'(1.000;1.000;0.993;0.996;1.000;1.000;1.000)3'
coverage = 0.979
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, cyto_nucl 10, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000494674
(
AK300050
)
(Heat shock 70 kDa protein 4.)
genome : 132,408,939 - 132,440,163 (31,225)
query : 1 - 2,112 (2,112/2,112)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 16, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000430090
(
AK311224
)
(Heat shock 70 kDa protein 4.)
genome : 132,408,940 - 132,425,358 (16,419)
query : 1 - 902 (902/902)
7 exons
identity = 0.998
5'(1.000;1.000;0.992;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000499202
(
AK304578
)
(Heat shock 70 kDa protein 4.)
genome : 132,409,679 - 132,440,348 (30,670)
query : 11 - 2,230 (2,220/2,230)
14 exons
identity = 1.000
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 14.5, nucl 12.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000430001
(
AK311135
)
(Heat shock 70 kDa protein 4.)
genome : 132,409,679 - 132,426,926 (17,248)
query : 11 - 907 (897/907)
7 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.989
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito 3, extr 2, nucl 2, lyso 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000604555 (
ENST00000504328
)
(Heat shock 70 kDa protein 4; Heat shock 70-related protein APG-2;)
genome : 132,411,735 - 132,424,187 (12,453)
query : 1 - 552 (552/552)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 9.5, mito 9, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000430165
(
AK311299
)
(Heat shock 70 kDa protein 4.)
genome : 132,412,389 - 132,431,913 (19,525)
query : 1 - 1,068 (1,068/1,068)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12, cyto 9.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000498006
(
AK303382
)
(Heat shock 70 kDa protein 4.)
genome : 132,412,482 - 132,440,331 (27,850)
query : 1 - 1,927 (1,927/1,927)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15, cyto 10.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000430332
(
AK311466
)
(Heat shock 70 kDa protein 4.)
genome : 132,412,562 - 132,432,928 (20,367)
query : 1 - 1,001 (1,001/1,001)
9 exons
identity = 0.998
5'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
0.993;1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 10, mito 3, golg 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000430481
(
AK311615
)
(Heat shock 70 kDa protein 4.)
genome : 132,422,511 - 132,437,504 (14,994)
query : 1 - 1,146 (1,146/1,146)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000430498
(
AK311632
)
(Heat shock 70 kDa protein 4.)
genome : 132,422,515 - 132,435,270 (12,756)
query : 1 - 1,014 (1,014/1,014)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR018181 : Heat shock protein 70, conserved site
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16.5, cyto 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000328531
(
AB074275
)
(Heat shock 70 kDa protein 4.)
genome : 132,423,784 - 132,425,412 (1,629)
query : 1 - 1,629 (1,629/1,629)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR029047 : Heat shock protein 70kD, peptide-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, extr 10, cyto_nucl 10, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000430288
(
AK311422
)
(Heat shock 70 kDa protein 4.)
genome : 132,424,195 - 132,437,519 (13,325)
query : 1 - 1,023 (1,023/1,023)
9 exons
identity = 0.998
5'(1.000;0.991;1.000;0.995;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 12, extr 2, E.R._mito 2, mito 1.5,
E.R. 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000430331
(
AK311465
)
(Heat shock 70 kDa protein 4.)
genome : 132,424,196 - 132,437,475 (13,280)
query : 1 - 978 (978/978)
9 exons
identity = 0.999
5'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 10, E.R._mito 4, mito 2.5, E.R. 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000429991
(
AK311125
)
(Heat shock 70 kDa protein 4.)
genome : 132,424,215 - 132,435,298 (11,084)
query : 1 - 887 (887/887)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12.5, extr 7, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000430323
(
AK311457
)
(Heat shock 70 kDa protein 4.)
genome : 132,426,891 - 132,440,011 (13,121)
query : 1 - 1,022 (1,022/1,022)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_nucl 15, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000494334
(
AK299710
)
(Heat shock 70 kDa protein 4.)
genome : 132,426,950 - 132,440,551 (13,602)
query : 1 - 1,503 (1,503/1,503)
8 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.983;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR029047 : Heat shock protein 70kD, peptide-binding domain
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.5, mito 5, extr 4, nucl 3.5,
mito_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000434753
(
AK315887
)
(Heat shock 70 kDa protein 4.)
genome : 132,428,396 - 132,440,182 (11,787)
query : 1 - 1,013 (1,013/1,013)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 16, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000430182
(
AK311316
)
(Heat shock 70 kDa protein 4.)
genome : 132,428,400 - 132,440,087 (11,688)
query : 1 - 914 (914/914)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013126 : Heat shock protein 70 family
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 16, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000434728
(
AK315862
)
(Heat shock 70 kDa protein 4.)
genome : 132,432,903 - 132,440,338 (7,436)
query : 1 - 880 (880/880)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, extr 3, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000434737
(
AK315871
)
(Heat shock 70 kDa protein 4.)
genome : 132,435,269 - 132,440,542 (5,274)
query : 1 - 976 (976/976)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16.6667, cyto_plas 14.1667,
nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000614294 (
ENST00000514825
)
(Heat shock 70 kDa protein 4.)
genome : 132,437,288 - 132,440,169 (2,882)
query : 1 - 690 (690/690)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.5, nucl 7, mito 5, extr 3,
pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000434741
(
AK315875
)
(Heat shock 70 kDa protein 4.)
genome : 132,437,452 - 132,440,766 (3,315)
query : 1 - 1,123 (1,123/1,123)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000492386
(
AK297762
)
(Heat shock 70 kDa protein 4.)
genome : 132,439,588 - 132,440,733 (1,146)
query : 1 - 940 (940/940)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029048 : Heat shock protein 70kD, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11.5, extr 8, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0005166
HIT000013629
(
AK057015
)
(Hypothetical protein.)
genome : 132,440,750 - 132,442,139 (1,390)
query : 1 - 1,374 (1,374/1,374)
1 exon
identity = 0.984
5'(0.984)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005166)
HIX0032251
HIT000607386 (
ENST00000507389
)
(Hypothetical short protein.)
genome : 132,446,747 - 132,450,167 (3,421)
query : 1 - 678 (678/678)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 5.5, nucl 4.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032251)
HIX0032251
HIT000067173
(
AF086294
)
Representative transcript
(Hypothetical short protein.)
genome : 132,446,760 - 132,450,167 (3,408)
query : 6 - 670 (665/679)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 5.5, nucl 4.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032251)
HIX0164329
HIT000608939 (
ENST00000509051
)
(Conserved hypothetical protein.)
genome : 132,496,130 - 132,559,995 (63,866)
query : 1 - 466 (466/466)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 8.5, cyto 7.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164329)
HIX0206404
HIT000571822 (
ENST00000467206
)
(Conserved hypothetical protein.)
genome : 132,507,910 - 132,508,745 (836)
query : 1 - 836 (836/836)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206404)
HIX0005168
HIT000109667 (
ENST00000265342
)
(Follistatin-related protein 4; Follistatin-like protein 4; Precursor;)
genome : 132,532,147 - 132,948,255 (416,109)
query : 1 - 5,419 (5,419/5,419)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 6, nucl 5, lyso 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005168)
HIX0005168
HIT000317196 (
NM_015082
)
(Follistatin-related protein 4; Follistatin-like protein 4; Precursor;)
genome : 132,532,152 - 132,948,223 (416,072)
query : 1 - 5,382 (5,382/5,382)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 6, nucl 5, lyso 3, E.R._mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005168)
HIX0005168
HIT000000778
(
AB028984
)
(Follistatin-related protein 4 precursor.)
genome : 132,532,152 - 132,652,308 (120,157)
query : 1 - 4,719 (4,719/4,719)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9, nucl 7.5, mito 5, extr 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005168)
HIX0005168
HIT000055392
(
BX640845
)
(Follistatin-related protein 4 precursor.)
genome : 132,534,159 - 133,191,214 (657,056)
query : 2 - 2,790 (2,789/2,867)
14 exons
identity = 0.996
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;0.944;1.000;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 6, cyto_nucl 5.16667, cyto_pero 4.83333,
nucl 4.5, cyto 4.5, pero 3, lyso 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005168)
HIX0005168
HIT000009383
(
AK026109
)
(Hypothetical protein.)
genome : 132,534,159 - 132,534,601 (443)
query : 1 - 443 (443/458)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005168)
HIX0005168
HIT000012898
(
AK056284
)
(Follistatin-related protein 4 precursor.)
genome : 132,534,160 - 132,561,617 (27,458)
query : 1 - 2,374 (2,374/2,374)
8 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 6, cyto 5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005168)
HIX0005168
HIT000609386 (
ENST00000509525
)
(Follistatin-related protein 4 precursor.)
genome : 132,534,160 - 132,561,617 (27,458)
query : 1 - 2,374 (2,374/2,374)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 6, nucl 5.5, cyto 5.5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005168)
HIX0005168
HIT000611097 (
ENST00000511375
)
(Follistatin-related protein 4 precursor.)
genome : 132,535,425 - 132,545,587 (10,163)
query : 1 - 571 (571/571)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11.5, extr 8, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005168)
HIX0005168
HIT000039815
(
BC024300
)
Representative transcript
(Follistatin-related protein 4 precursor.)
genome : 132,537,643 - 132,948,255 (410,613)
query : 1 - 2,058 (2,058/2,127)
15 exons
identity = 0.999
3'(0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.995
InterPro :
IPR002048 : EF-hand domain
IPR002350 : Kazal domain
IPR003598 : Immunoglobulin subtype 2
IPR011992 : EF-hand domain pair
IPR013098 : Immunoglobulin I-set
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 6, nucl 5.5, cyto_nucl 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005168)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AF257353
Mus
sp. (Mouse) : AF374459
Danio
sp. (Zebrafish) : ENSDART00000065083
Equus
sp. (Horse) : ENSECAT00000019373
Oryzias
sp. (Medaka) : ENSORLT00000001262
Pongo
sp. (Orangutan) : ENSPPYT00000018355
Rattus
sp. (Rat) : ENSRNOT00000008692
Tetraodon
sp. (Tetraodon) : GSTENT00029878001
Takifugu
sp. (Fugu) : SINFRUT00000156670
Macaca
sp. (Macaque) : XM_001107348
Pan
sp. (Chimpanzee) : XM_001165807
Monodelphis
sp. (Opossum) : XM_001371257
Canis
sp. (Dog) : XM_538625
Bos
sp. (Cow) : XM_613235
HIX0164329
HIT000603107 (
ENST00000502776
)
(Hypothetical short protein.)
genome : 132,545,685 - 132,560,105 (14,421)
query : 1 - 570 (570/570)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 10, cyto_nucl 9.5, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164329)
HIX0164329
HIT000018198
(
AK093331
)
Representative transcript
(Follistatin-related protein 4 precursor.)
genome : 132,549,379 - 132,561,726 (12,348)
query : 1 - 1,979 (1,979/1,979)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, mito 2, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164329)
HIX0005168
HIT000012298
(
AK055684
)
(Follistatin-related protein 4 precursor.)
genome : 132,556,424 - 132,948,201 (391,778)
query : 1 - 1,669 (1,669/1,670)
12 exons
identity = 0.997
3'(0.971;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR002048 : EF-hand domain
IPR002350 : Kazal domain
IPR003598 : Immunoglobulin subtype 2
IPR011992 : EF-hand domain pair
IPR013098 : Immunoglobulin I-set
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 6, nucl 4.5, cyto_nucl 4, lyso 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005168)
HIX0005168
HIT000607126 (
ENST00000507112
)
(Follistatin-related protein 4 precursor.)
genome : 132,556,465 - 132,587,956 (31,492)
query : 1 - 817 (817/817)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 20, cyto 13.5, nucl 11.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005168)
HIX0024906
HIT000604540 (
ENST00000504312
)
(Conserved hypothetical protein.)
genome : 132,579,456 - 132,582,623 (3,168)
query : 1 - 536 (536/536)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5.5, cyto_nucl 5.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024906)
HIX0024906
HIT000048047
(
AK128174
)
Representative transcript
(Conserved hypothetical protein.)
genome : 132,579,643 - 132,584,473 (4,831)
query : 1 - 3,142 (3,142/3,143)
2 exons
identity = 1.000
5'(0.999;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 6.5, extr_plas 6.5, cyto_pero 5.5,
nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024906)
HIX0024906
HIT000614572 (
ENST00000515122
)
(Conserved hypothetical protein.)
genome : 132,579,643 - 132,584,473 (4,831)
query : 1 - 3,142 (3,142/3,142)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 10, nucl 4, cyto 4, cyto_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024906)
HIX0206245
HIT000608846 (
ENST00000508950
)
(Conserved hypothetical protein.)
genome : 132,592,184 - 132,611,669 (19,486)
query : 1 - 264 (264/264)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12, extr 10, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206245)
HIX0206245
HIT000607399 (
ENST00000507403
)
(Conserved hypothetical protein.)
genome : 132,602,277 - 132,611,669 (9,393)
query : 1 - 389 (389/389)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12, extr 10, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206245)
HIX0005168
HIT000614459 (
ENST00000514998
)
(Follistatin-related protein 4 precursor.)
genome : 132,648,109 - 132,669,750 (21,642)
query : 1 - 488 (488/488)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 8, nucl 6, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005168)
HIX0005168
HIT000610449 (
ENST00000510685
)
(Follistatin-related protein 4 precursor.)
genome : 132,652,289 - 132,919,332 (267,044)
query : 1 - 716 (716/716)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 11, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005168)
HIX0206799
HIT000607926 (
ENST00000507964
)
(Hypothetical short protein.)
genome : 132,723,465 - 132,724,241 (777)
query : 1 - 275 (275/275)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13, nucl 11, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206799)
HIX0216637
HIT000691259_02 (
ENST00000579330
)
(Non-protein coding transcript.)
genome : 132,961,536 - 132,961,639 (104)
query : 1 - 104 (104/104)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216637)
HIX0206816
HIT000608322 (
ENST00000508392
)
(Conserved hypothetical protein.)
genome : 133,056,186 - 133,056,625 (440)
query : 1 - 440 (440/440)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206816)
HIX0207085
HIT000613122 (
ENST00000513561
)
(Hypothetical short protein.)
genome : 133,249,368 - 133,252,960 (3,593)
query : 1 - 683 (683/683)
3 exons
identity = 0.990
5'(1.000;0.980;0.981)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11.5, cyto_nucl 10.1667, cyto 5.5,
cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207085)
HIX0200718
HIT000039016
(
BC020875
)
(Keratinocyte-associated transmembrane protein 2; Precursor;)
genome : 133,291,207 - 133,304,297 (13,091)
query : 1 - 2,163 (2,163/2,192)
3 exons
identity = 1.000
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 6, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200718)
HIX0200718
HIT000207797 (
NM_020199
)
(Keratinocyte-associated transmembrane protein 2; Precursor;)
genome : 133,291,198 - 133,304,406 (13,209)
query : 1 - 2,281 (2,281/2,298)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 6, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200718)
HIX0200718
HIT000002368
(
AF226055
)
Representative transcript
(Keratinocyte-associated transmembrane protein 2; Precursor;)
genome : 133,291,201 - 133,304,478 (13,278)
query : 1 - 2,354 (2,354/2,371)
3 exons
identity = 0.998
3'(0.998;1.000;0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 6, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200718)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169899
Gallus
sp. (Chicken) : AJ719985
Mus
sp. (Mouse) : AK079269
Rattus
sp. (Rat) : BC079420
Bos
sp. (Cow) : BC102841
Pongo
sp. (Orangutan) : CR860944
Canis
sp. (Dog) : ENSCAFT00000001513
Equus
sp. (Horse) : ENSECAT00000018154
Monodelphis
sp. (Opossum) : ENSMODT00000018017
Oryzias
sp. (Medaka) : ENSORLT00000014822
Pan
sp. (Chimpanzee) : XM_001165910
Danio
sp. (Zebrafish) : XM_692943
HIX0200718
HIT000063248
(
AF035313
)
(Hypothetical short protein.)
genome : 133,291,201 - 133,292,569 (1,369)
query : 1 - 1,370 (1,370/1,387)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, cyto_mito 10.6667, extr 10, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200718)
HIX0200718
HIT000104385 (
ENST00000231512
)
(Keratinocyte-associated transmembrane protein 2; Precursor;)
genome : 133,291,201 - 133,304,478 (13,278)
query : 1 - 2,350 (2,350/2,350)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 6, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200718)
HIX0200718
HIT000081998
(
AK074963
)
(Keratinocyte-associated transmembrane protein 2; Precursor;)
genome : 133,291,202 - 133,304,318 (13,117)
query : 1 - 2,189 (2,189/2,189)
3 exons
identity = 0.999
3'(0.999;0.996;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 6, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200718)
HIX0200718
HIT000493139
(
AK298515
)
(Keratinocyte-associated transmembrane protein 2 precursor.)
genome : 133,291,767 - 133,304,298 (12,532)
query : 1 - 1,521 (1,521/1,521)
4 exons
identity = 0.999
3'(1.000;0.997;0.993;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16, plas 5, nucl 4.5, cyto_nucl 4.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200718)
HIX0200718
HIT000084832
(
AY157581
)
(Keratinocyte-associated transmembrane protein 2; Precursor;)
genome : 133,292,430 - 133,304,315 (11,886)
query : 1 - 958 (958/958)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 6, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200718)
HIX0200718
HIT000434228
(
AK315362
)
(Keratinocyte-associated transmembrane protein 2; Precursor;)
genome : 133,292,550 - 133,304,304 (11,755)
query : 1 - 827 (827/827)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 6, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200718)
HIX0200718
HIT000607197 (
ENST00000507191
)
(Keratinocyte-associated transmembrane protein 2; Precursor;)
genome : 133,295,226 - 133,304,365 (9,140)
query : 1 - 635 (635/635)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 9.5, mito 9, extr 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200718)
HIX0200718
HIT000609745 (
ENST00000509913
)
(Conserved hypothetical protein.)
genome : 133,295,469 - 133,304,316 (8,848)
query : 1 - 487 (487/487)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 13.5, cyto_nucl 10.1667, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200718)
HIX0005171
HIT000033820
(
BC008482
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,307,566 - 133,340,362 (32,797)
query : 1 - 1,778 (1,778/1,811)
9 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.998
InterPro :
IPR001925 : Porin, eukaryotic type
IPR023614 : Porin domain
IPR027246 : Eukaryotic porin/Tom40
GO :
0005741 : Cellular Component : mitochondrial outer membrane
0006820 : Biological Process : anion transport
0008308 : Molecular Function : voltage-gated anion channel activity
0044070 : Biological Process : regulation of anion transport
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0005171
HIT000200210 (
NM_003374
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,307,566 - 133,340,824 (33,259)
query : 1 - 1,993 (1,993/1,993)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0005171
HIT000659678 (
NR_036624
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,307,566 - 133,340,657 (33,092)
query : 1 - 2,071 (2,071/2,071)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0005171
HIT000659679 (
NR_036625
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,307,566 - 133,340,657 (33,092)
query : 1 - 2,074 (2,074/2,074)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0005171
HIT000266302
(
BC090042
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,307,606 - 133,340,386 (32,781)
query : 1 - 1,764 (1,764/1,783)
9 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001925 : Porin, eukaryotic type
IPR023614 : Porin domain
IPR027246 : Eukaryotic porin/Tom40
GO :
0005741 : Cellular Component : mitochondrial outer membrane
0006820 : Biological Process : anion transport
0008308 : Molecular Function : voltage-gated anion channel activity
0044070 : Biological Process : regulation of anion transport
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0005171
HIT000264378
(
BC071168
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,307,606 - 133,340,396 (32,791)
query : 1 - 1,770 (1,770/1,784)
9 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001925 : Porin, eukaryotic type
IPR023614 : Porin domain
IPR027246 : Eukaryotic porin/Tom40
GO :
0005741 : Cellular Component : mitochondrial outer membrane
0006820 : Biological Process : anion transport
0008308 : Molecular Function : voltage-gated anion channel activity
0044070 : Biological Process : regulation of anion transport
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0005171
HIT000109661 (
ENST00000265333
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,307,606 - 133,340,824 (33,219)
query : 1 - 1,953 (1,953/1,953)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0005171
HIT000478432_01 (
ENST00000395044
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,307,606 - 133,340,433 (32,828)
query : 1 - 1,807 (1,807/1,807)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0005171
HIT000042826
(
AK122953
)
Representative transcript
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,307,607 - 133,443,058 (135,452)
query : 1 - 3,355 (3,355/3,355)
12 exons
identity = 0.993
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.975;0.990)5'
coverage = 1.000
InterPro :
IPR001925 : Porin, eukaryotic type
IPR023614 : Porin domain
IPR027246 : Eukaryotic porin/Tom40
GO :
0005741 : Cellular Component : mitochondrial outer membrane
0006820 : Biological Process : anion transport
0008308 : Molecular Function : voltage-gated anion channel activity
0044070 : Biological Process : regulation of anion transport
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB039662
Macaca
sp. (Macaque) : AB170428
Mus
sp. (Mouse) : AK002740
Bos
sp. (Cow) : BC102113
Gallus
sp. (Chicken) : CR390115
Tetraodon
sp. (Tetraodon) : CR728076
Danio
sp. (Zebrafish) : ENSDART00000066373
Oryzias
sp. (Medaka) : ENSORLT00000001217
Pongo
sp. (Orangutan) : ENSPPYT00000018358
Pan
sp. (Chimpanzee) : ENSPTRT00000031908
Takifugu
sp. (Fugu) : SINFRUT00000146568
Takifugu
sp. (Fugu) : SINFRUT00000154974
Monodelphis
sp. (Opossum) : XM_001365850
Equus
sp. (Horse) : XM_001504409
Canis
sp. (Dog) : XM_531907
HIX0005171
HIT000020844
(
AK095989
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,307,607 - 133,340,824 (33,218)
query : 1 - 1,952 (1,952/1,952)
9 exons
identity = 0.998
3'(0.998;1.000;1.000;0.996;0.981;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001925 : Porin, eukaryotic type
IPR023614 : Porin domain
IPR027246 : Eukaryotic porin/Tom40
GO :
0005741 : Cellular Component : mitochondrial outer membrane
0006820 : Biological Process : anion transport
0008308 : Molecular Function : voltage-gated anion channel activity
0044070 : Biological Process : regulation of anion transport
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0005171
HIT000191701
(
L06132
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,307,607 - 133,340,433 (32,827)
query : 1 - 1,806 (1,806/1,806)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001925 : Porin, eukaryotic type
IPR023614 : Porin domain
IPR027246 : Eukaryotic porin/Tom40
GO :
0005741 : Cellular Component : mitochondrial outer membrane
0006820 : Biological Process : anion transport
0008308 : Molecular Function : voltage-gated anion channel activity
0044070 : Biological Process : regulation of anion transport
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0005171
HIT000478435 (
ENST00000395047
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,307,643 - 133,340,533 (32,891)
query : 1 - 1,873 (1,873/1,873)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0005171
HIT000488263
(
AK293639
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,307,973 - 133,340,414 (32,442)
query : 1 - 1,043 (1,043/1,043)
6 exons
identity = 0.984
3'(1.000;1.000;0.993;0.902;0.917;1.000)5'
coverage = 1.000
InterPro :
IPR001925 : Porin, eukaryotic type
IPR023614 : Porin domain
IPR027246 : Eukaryotic porin/Tom40
GO :
0005741 : Cellular Component : mitochondrial outer membrane
0006820 : Biological Process : anion transport
0008308 : Molecular Function : voltage-gated anion channel activity
0044070 : Biological Process : regulation of anion transport
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 6, cyto 5.5, extr 5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0005171
HIT000595812_01 (
ENST00000492324
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,308,417 - 133,316,708 (8,292)
query : 1 - 635 (635/635)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 7, cyto 7, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0005171
HIT000593493 (
ENST00000489906
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,308,417 - 133,312,060 (3,644)
query : 1 - 694 (694/694)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 8, nucl 7.5, cyto 7.5, mito 3,
E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0005171
HIT000537163_02 (
ENST00000439229
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,308,464 - 133,328,703 (20,240)
query : 1 - 848 (848/848)
8 exons
identity = 0.974
3'(0.989;1.000;0.987;0.969;0.981;0.961;0.980;
0.940)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13, nucl 8, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0024948
HIT000049916
(
AK130645
)
Representative transcript
(Conserved hypothetical protein.)
genome : 133,313,872 - 133,315,842 (1,971)
query : 1 - 1,976 (1,976/1,976)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024948)
HIX0005171
HIT000523926 (
ENST00000425992
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,316,419 - 133,340,326 (23,908)
query : 1 - 704 (704/704)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 14, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0005171
HIT000570751 (
ENST00000466080
)
(Voltage-dependent anion-selective channel protein 1; VDAC-1; hVDAC1; Outer mitochondrial membrane protein porin 1; Plasmalemmal porin; Porin 31HL; Porin 31HM;)
genome : 133,324,479 - 133,340,383 (15,905)
query : 1 - 831 (831/831)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 10.5, mito 6, extr 5, nucl 3,
E.R._mito 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005171)
HIX0018353
HIT000012520
(
AK055906
)
Representative transcript
(Conserved hypothetical protein.)
genome : 133,336,500 - 133,338,803 (2,304)
query : 1 - 2,304 (2,304/2,304)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018353)
HIX0018313
HIT000014193
(
AK057579
)
Representative transcript
(Conserved hypothetical protein.)
genome : 133,394,188 - 133,397,046 (2,859)
query : 1 - 2,865 (2,865/2,866)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018313)
HIX0216382
pHIT000009638 ( pHIT000009638 )
(Conserved hypothetical protein.)
genome : 133,449,877 - 133,487,619 (37,743)
query : 1 - 1,482 (1,482/1,482)
14 exons
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
IPR028785 : Transcription factor 7
GO :
0005634 : Cellular Component : nucleus
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0008013 : Molecular Function : beta-catenin binding
0016055 : Biological Process : Wnt signaling pathway
0033153 : Biological Process : T cell receptor V(D)J recombination
0060070 : Biological Process : canonical Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216382)
CAGE tag :
H05BB79K1605
HIX0216382
pHIT000009640 ( pHIT000009640 )
(Conserved hypothetical protein.)
genome : 133,449,877 - 133,487,619 (37,743)
query : 1 - 1,389 (1,389/1,389)
13 exons
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
IPR028785 : Transcription factor 7
GO :
0005634 : Cellular Component : nucleus
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0008013 : Molecular Function : beta-catenin binding
0016055 : Biological Process : Wnt signaling pathway
0033153 : Biological Process : T cell receptor V(D)J recombination
0060070 : Biological Process : canonical Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216382)
CAGE tag :
H28BA18C1407
HIX0216382
pHIT000077341 ( pHIT000077341 )
(Conserved hypothetical protein.)
genome : 133,449,877 - 133,487,619 (37,743)
query : 1 - 1,200 (1,200/1,200)
11 exons
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
IPR028785 : Transcription factor 7
GO :
0005634 : Cellular Component : nucleus
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0008013 : Molecular Function : beta-catenin binding
0016055 : Biological Process : Wnt signaling pathway
0033153 : Biological Process : T cell receptor V(D)J recombination
0060070 : Biological Process : canonical Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216382)
CAGE tag :
H05BB79K1605
HIX0216382
pHIT000103598 ( pHIT000103598 )
(Conserved hypothetical protein.)
genome : 133,449,877 - 133,487,619 (37,743)
query : 1 - 1,545 (1,545/1,545)
14 exons
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
IPR028785 : Transcription factor 7
GO :
0005634 : Cellular Component : nucleus
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0008013 : Molecular Function : beta-catenin binding
0016055 : Biological Process : Wnt signaling pathway
0033153 : Biological Process : T cell receptor V(D)J recombination
0060070 : Biological Process : canonical Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216382)
CAGE tag :
T05R07F5AAEF
HIX0216382
HIT000618528 (
ENST00000519165
)
(Transcription factor 7 family protein.)
genome : 133,451,602 - 133,475,549 (23,948)
query : 1 - 1,137 (1,137/1,137)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14, cyto 8.5, mito_nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216382)
HIX0020401
HIT000014209
(
AK057595
)
Representative transcript
(Conserved hypothetical protein.)
genome : 133,470,961 - 133,473,116 (2,156)
query : 1 - 2,156 (2,156/2,156)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 16, cyto 9.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020401)
HIX0216382
HIT000621278 (
ENST00000521970
)
(CTNNB1 binding, N-teminal domain containing protein.)
genome : 133,473,556 - 133,474,943 (1,388)
query : 1 - 602 (602/602)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14.5, cyto 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216382)
HIX0216382
HIT000616875 (
ENST00000517478
)
(CTNNB1 binding, N-teminal domain containing protein.)
genome : 133,473,795 - 133,477,041 (3,247)
query : 1 - 572 (572/572)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 11.5, cyto 11.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216382)
HIX0216382
HIT000620030 (
ENST00000520699
)
(High mobility group box domain containing protein.)
genome : 133,478,483 - 133,487,556 (9,074)
query : 1 - 459 (459/459)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12, cyto 8.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216382)
HIX0216382
HIT000327375
(
Z47363
)
(Non-protein coding transcript.)
genome : 133,479,309 - 133,481,994 (2,686)
query : 1 - 184 (184/184)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216382)
HIX0216382
HIT000327376
(
Z47364
)
Representative transcript
(Conserved hypothetical protein.)
genome : 133,479,309 - 133,481,994 (2,686)
query : 1 - 516 (516/516)
2 exons
identity = 0.994
5'(1.000;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216382)
HIX0005173
HIT000203492 (
NM_006930
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 133,492,083 - 133,512,724 (20,642)
query : 1 - 2,698 (2,698/2,714)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.3
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 4, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000214517 (
NM_170679
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 133,492,083 - 133,512,724 (20,642)
query : 1 - 2,012 (2,012/2,028)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.3
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 4, extr 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000308392 (
ENST00000353411
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 133,492,082 - 133,512,729 (20,648)
query : 1 - 2,018 (2,018/2,018)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 4, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000327307
(
Z47087
)
Representative transcript
(S-phase kinase-associated protein 1; Cyclin-A/CDK2-associated protein p19; Organ of Corti protein 2; OCP-2; Organ of Corti protein II; OCP-II; RNA polymerase II elongation factor-like protein; SIII; Transcription elongation factor B; p19A; p19skp1;)
genome : 133,492,569 - 133,512,656 (20,088)
query : 1 - 1,456 (1,456/1,456)
6 exons
identity = 0.989
3'(0.985;1.000;1.000;1.000;1.000;0.973)5'
coverage = 1.000
InterPro :
IPR001232 : S-phase kinase-associated protein 1-like
IPR011333 : BTB/POZ fold
IPR016072 : SKP1 component, dimerisation
IPR016073 : SKP1 component, POZ domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 4, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000262011
(
BC065730
)
(S-phase kinase-associated protein 1; Cyclin-A/CDK2-associated protein p19; Organ of Corti protein 2; OCP-2; Organ of Corti protein II; OCP-II; RNA polymerase II elongation factor-like protein; SIII; Transcription elongation factor B; p19A; p19skp1;)
genome : 133,492,732 - 133,512,641 (19,910)
query : 5 - 1,284 (1,280/1,313)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR001232 : S-phase kinase-associated protein 1-like
IPR011333 : BTB/POZ fold
IPR016072 : SKP1 component, dimerisation
IPR016073 : SKP1 component, POZ domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 4, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000039949
(
BC025673
)
(S-phase kinase-associated protein 1 isoform a.)
genome : 133,493,039 - 133,512,621 (19,583)
query : 1 - 1,638 (1,638/1,657)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.3
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
InterPro :
IPR001232 : S-phase kinase-associated protein 1-like
IPR011333 : BTB/POZ fold
IPR016072 : SKP1 component, dimerisation
IPR016073 : SKP1 component, POZ domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 4, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000621845 (
ENST00000522552
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 133,493,029 - 133,512,655 (19,627)
query : 1 - 1,683 (1,683/1,683)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 4, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000034610
(
BC009839
)
(S-phase kinase-associated protein 1; Cyclin-A/CDK2-associated protein p19; Organ of Corti protein 2; OCP-2; Organ of Corti protein II; OCP-II; RNA polymerase II elongation factor-like protein; SIII; Transcription elongation factor B; p19A; p19skp1;)
genome : 133,493,059 - 133,512,608 (19,550)
query : 1 - 920 (920/943)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001232 : S-phase kinase-associated protein 1-like
IPR011333 : BTB/POZ fold
IPR016072 : SKP1 component, dimerisation
IPR016073 : SKP1 component, POZ domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 4, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000620533 (
ENST00000521216
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 133,493,083 - 133,512,611 (19,529)
query : 1 - 899 (899/899)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 4, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000038968
(
BC020798
)
(S-phase kinase-associated protein 1; Cyclin-A/CDK2-associated protein p19; Organ of Corti protein 2; OCP-2; Organ of Corti protein II; OCP-II; RNA polymerase II elongation factor-like protein; SIII; Transcription elongation factor B; p19A; p19skp1;)
genome : 133,493,171 - 133,512,659 (19,489)
query : 1 - 859 (859/888)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001232 : S-phase kinase-associated protein 1-like
IPR011333 : BTB/POZ fold
IPR016072 : SKP1 component, dimerisation
IPR016073 : SKP1 component, POZ domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 4, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000013724
(
AK057110
)
(S-phase kinase-associated protein 1 isoform a.)
genome : 133,493,165 - 133,497,588 (4,424)
query : 1 - 2,033 (2,033/2,033)
2 exons
identity = 0.998
3'(0.999;0.997)5'
coverage = 1.000
EC number :
EC 3.1.1.3
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
InterPro :
IPR001232 : S-phase kinase-associated protein 1-like
IPR011333 : BTB/POZ fold
IPR016072 : SKP1 component, dimerisation
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000617085 (
ENST00000517691
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 133,493,165 - 133,497,588 (4,424)
query : 1 - 2,033 (2,033/2,033)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000219526
(
U37558
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 133,493,166 - 133,509,674 (16,509)
query : 1 - 711 (711/711)
5 exons
identity = 0.997
3'(0.993;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001232 : S-phase kinase-associated protein 1-like
IPR011333 : BTB/POZ fold
IPR016072 : SKP1 component, dimerisation
IPR016073 : SKP1 component, POZ domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 4, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000617019 (
ENST00000517625
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 133,493,199 - 133,512,410 (19,212)
query : 1 - 876 (876/876)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000623233 (
ENST00000523966
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 133,493,201 - 133,512,641 (19,441)
query : 1 - 899 (899/899)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000622140 (
ENST00000522855
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 133,493,263 - 133,512,641 (19,379)
query : 1 - 802 (802/802)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000219327
(
U33760
)
(S-phase kinase-associated protein 1; Cyclin-A/CDK2-associated protein p19; Organ of Corti protein 2; OCP-2; Organ of Corti protein II; OCP-II; RNA polymerase II elongation factor-like protein; SIII; Transcription elongation factor B; p19A; p19skp1;)
genome : 133,493,390 - 133,512,614 (19,225)
query : 25 - 619 (595/619)
6 exons
identity = 0.992
3'(1.000;1.000;0.993;1.000;0.990;0.957)5'
coverage = 0.961
InterPro :
IPR001232 : S-phase kinase-associated protein 1-like
IPR011333 : BTB/POZ fold
IPR016072 : SKP1 component, dimerisation
IPR016073 : SKP1 component, POZ domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 4, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000125526 (
ENST00000328392
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 133,494,146 - 133,512,641 (18,496)
query : 1 - 552 (552/572)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.965
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000342119
(
DQ185037
)
(Non-protein coding transcript.)
genome : 133,494,143 - 133,494,235 (93)
query : 1 - 95 (95/96)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 0.990
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000618419 (
ENST00000519054
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 133,494,171 - 133,512,649 (18,479)
query : 1 - 654 (654/654)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 16.3333, cyto_plas 13.3333,
nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000618678 (
ENST00000519321
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 133,494,175 - 133,512,641 (18,467)
query : 1 - 692 (692/692)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000619756 (
ENST00000520417
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 133,496,687 - 133,510,456 (13,770)
query : 1 - 610 (610/610)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.5, nucl 6.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000623551 (
ENST00000524288
)
(SKP1 component, POZ domain containing protein.)
genome : 133,509,078 - 133,512,641 (3,564)
query : 1 - 732 (732/732)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 11, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0005173
HIT000622640 (
ENST00000523359
)
(Hypothetical short protein.)
genome : 133,509,658 - 133,511,261 (1,604)
query : 1 - 748 (748/748)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005173)
HIX0216230
HIT000585175 (
ENST00000481195
)
(Calcineurin-like phosphoesterase domain, apaH type containing protein.)
genome : 133,530,025 - 133,561,833 (31,809)
query : 1 - 4,649 (4,649/4,649)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, extr 8, nucl 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000199593 (
NM_002715
)
(Calcineurin-like phosphoesterase domain, apaH type containing protein.)
genome : 133,532,148 - 133,561,950 (29,803)
query : 1 - 2,643 (2,643/2,643)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, extr 8, nucl 4, extr_plas 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000022453
(
AK097599
)
Representative transcript
(Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; PP2A-alpha; EC=3.1.3.16; Replication protein C; RP-C;)
genome : 133,532,241 - 133,561,762 (29,522)
query : 1 - 2,362 (2,362/2,362)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR029052 : Metallo-dependent phosphatase-like
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000031072
(
BC002657
)
(Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; PP2A-alpha; EC=3.1.3.16; Replication protein C; RP-C;)
genome : 133,532,417 - 133,561,751 (29,335)
query : 1 - 2,175 (2,175/2,193)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR029052 : Metallo-dependent phosphatase-like
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000321319
(
X12646
)
(Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; PP2A-alpha; EC=3.1.3.16; Replication protein C; RP-C;)
genome : 133,532,432 - 133,561,624 (29,193)
query : 6 - 2,036 (2,031/2,036)
7 exons
identity = 0.981
3'(0.980;1.000;1.000;1.000;1.000;1.000;0.913)5'
coverage = 0.998
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR029052 : Metallo-dependent phosphatase-like
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000029589
(
BC000400
)
(Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; PP2A-alpha; EC=3.1.3.16; Replication protein C; RP-C;)
genome : 133,532,786 - 133,561,751 (28,966)
query : 1 - 1,806 (1,806/1,824)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR029052 : Metallo-dependent phosphatase-like
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000038598
(
BC019275
)
(Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; PP2A-alpha; EC=3.1.3.16; Replication protein C; RP-C;)
genome : 133,532,786 - 133,561,751 (28,966)
query : 1 - 1,806 (1,806/1,824)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR029052 : Metallo-dependent phosphatase-like
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000041369
(
BC031696
)
(Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; PP2A-alpha; EC=3.1.3.16; Replication protein C; RP-C;)
genome : 133,532,789 - 133,561,751 (28,963)
query : 1 - 1,803 (1,803/1,820)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR029052 : Metallo-dependent phosphatase-like
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000014038
(
AK057424
)
(Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform; PP2A-beta; EC=3.1.3.16; Fragment;)
genome : 133,532,787 - 133,561,761 (28,975)
query : 2 - 1,736 (1,735/1,736)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.989)5'
coverage = 0.999
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR029052 : Metallo-dependent phosphatase-like
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.5, nucl 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000191205
(
J03804
)
(Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; PP2A-alpha; EC=3.1.3.16; Replication protein C; RP-C;)
genome : 133,532,788 - 133,561,746 (28,959)
query : 3 - 1,786 (1,784/1,787)
7 exons
identity = 0.986
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.919)5'
coverage = 0.998
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR029052 : Metallo-dependent phosphatase-like
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000576639 (
ENST00000472253
)
(Metallo-dependent phosphatase-like domain containing protein.)
genome : 133,533,327 - 133,535,131 (1,805)
query : 11 - 574 (564/574)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6.5, cyto_nucl 5.33333,
cyto_pero 4.16667, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000268267
(
CR457417
)
(Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; PP2A-alpha; EC=3.1.3.16; Replication protein C; RP-C;)
genome : 133,533,463 - 133,561,552 (28,090)
query : 1 - 930 (930/930)
7 exons
identity = 0.997
3'(0.986;1.000;1.000;0.989;0.994;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR029052 : Metallo-dependent phosphatase-like
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000487453
(
AB451240
)
(Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; PP2A-alpha; EC=3.1.3.16; Replication protein C; RP-C;)
genome : 133,533,463 - 133,561,552 (28,090)
query : 1 - 930 (930/930)
7 exons
identity = 0.999
3'(0.986;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR029052 : Metallo-dependent phosphatase-like
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000487578
(
AB451365
)
(Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; PP2A-alpha; EC=3.1.3.16; Replication protein C; RP-C;)
genome : 133,533,466 - 133,561,552 (28,087)
query : 1 - 927 (927/927)
7 exons
identity = 0.999
3'(0.986;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR029052 : Metallo-dependent phosphatase-like
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000599183 (
ENST00000495833
)
(Calcineurin-like phosphoesterase domain, apaH type containing protein.)
genome : 133,536,665 - 133,538,176 (1,512)
query : 1 - 739 (739/739)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 8, cyto_nucl 7, mito_pero 7, nucl 5,
cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000621683 (
ENST00000522385
)
(Calcineurin-like phosphoesterase domain, apaH type containing protein.)
genome : 133,536,679 - 133,561,245 (24,567)
query : 1 - 585 (585/585)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, cyto_mito 13.8333, cyto_nucl 5.16667,
cyto 4.5, cyto_pero 3.33333, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000622366 (
ENST00000523082
)
(Calcineurin-like phosphoesterase domain, apaH type containing protein.)
genome : 133,537,550 - 133,560,084 (22,535)
query : 1 - 510 (510/510)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 8, cyto 7, mito 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0216230
HIT000104383 (
ENST00000231504
)
(Calcineurin-like phosphoesterase domain, apaH type containing protein.)
genome : 133,539,216 - 133,561,764 (22,549)
query : 1 - 564 (564/564)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216230)
HIX0207371
HIT000659795 (
NR_037434
)
(Non-protein coding transcript.)
genome : 133,561,448 - 133,561,543 (96)
query : 1 - 96 (96/96)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207371)
HIX0207371
HIT000689348 (
ENST00000577394
)
(Non-protein coding transcript.)
genome : 133,561,448 - 133,561,543 (96)
query : 1 - 96 (96/96)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207371)
HIX0032404
HIT000093378
(
BC034282
)
Representative transcript
(Hypothetical short protein.)
genome : 133,562,101 - 133,563,505 (1,405)
query : 1 - 1,405 (1,405/1,420)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032404)
HIX0216656
HIT000714652 (
ENST00000602919
)
(Hypothetical protein.)
genome : 133,562,101 - 133,563,518 (1,418)
query : 1 - 1,418 (1,418/1,418)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 14.5, cyto 4, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216656)
HIX0216706
HIT000204798 (
NM_014423
)
(Transcription factor AF4/FMR2 family protein.)
genome : 132,211,071 - 132,299,354 (88,284)
query : 1 - 9,580 (9,580/9,580)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17.8333, cyto 5.5, cyto_golg 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216706)
HIX0216706
HIT000109668 (
ENST00000265343
)
(Transcription factor AF4/FMR2 family protein.)
genome : 132,211,071 - 132,299,326 (88,256)
query : 1 - 9,552 (9,552/9,552)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17.8333, cyto 5.5, cyto_golg 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216706)
HIX0005172
HIT000200058 (
NM_003202
)
(Transcription factor 7; TCF-7; T-cell-specific transcription factor 1; T-cell factor 1; TCF-1;)
genome : 133,450,402 - 133,483,920 (33,519)
query : 1 - 3,277 (3,277/3,277)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14.5, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000053335
(
BC048769
)
Representative transcript
(Transcription factor 7; TCF-7; T-cell-specific transcription factor 1; T-cell factor 1; TCF-1;)
genome : 133,450,402 - 133,483,665 (33,264)
query : 1 - 3,022 (3,022/3,047)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
IPR027397 : Catenin binding domain
IPR028785 : Transcription factor 7
GO :
0005634 : Cellular Component : nucleus
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0008013 : Molecular Function : beta-catenin binding
0016055 : Biological Process : Wnt signaling pathway
0033153 : Biological Process : T cell receptor V(D)J recombination
0060070 : Biological Process : canonical Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000135484 (
ENST00000342854
)
(Transcription factor 7; TCF-7; T-cell-specific transcription factor 1; T-cell factor 1; TCF-1;)
genome : 133,450,402 - 133,483,665 (33,264)
query : 1 - 3,022 (3,022/3,045)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000122842 (
ENST00000321603
)
(Transcription factor 7 isoform 1.)
genome : 133,450,402 - 133,481,914 (31,513)
query : 1 - 1,294 (1,294/1,294)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 14, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000122835 (
ENST00000321584
)
(Transcription factor 7; TCF-7; T-cell-specific transcription factor 1; T-cell factor 1; TCF-1;)
genome : 133,450,402 - 133,481,511 (31,110)
query : 1 - 1,351 (1,351/1,351)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 15.5, extr 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000359844 (
ENST00000378564
)
(Transcription factor 7 isoform 4.)
genome : 133,450,402 - 133,480,985 (30,584)
query : 1 - 1,306 (1,306/1,306)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14, cyto 5.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000478419 (
ENST00000395029
)
(Transcription factor 7 isoform 4.)
genome : 133,450,403 - 133,483,901 (33,499)
query : 1 - 3,330 (3,330/3,330)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 16.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000264826
(
BC072023
)
(Transcription factor 7; TCF-7; T-cell-specific transcription factor 1; T-cell factor 1; TCF-1;)
genome : 133,450,467 - 133,483,665 (33,199)
query : 1 - 2,957 (2,957/2,974)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
IPR027397 : Catenin binding domain
IPR028785 : Transcription factor 7
GO :
0005634 : Cellular Component : nucleus
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0008013 : Molecular Function : beta-catenin binding
0016055 : Biological Process : Wnt signaling pathway
0033153 : Biological Process : T cell receptor V(D)J recombination
0060070 : Biological Process : canonical Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AF454504
Bos
sp. (Cow) : BC151260
Canis
sp. (Dog) : ENSCAFT00000001527
Oryzias
sp. (Medaka) : ENSORLT00000010534
Pongo
sp. (Orangutan) : ENSPPYT00000018359
Tetraodon
sp. (Tetraodon) : GSTENT00029890001
Takifugu
sp. (Fugu) : SINFRUT00000179089
Mus
sp. (Mouse) : X61385
Macaca
sp. (Macaque) : XM_001107710
Pan
sp. (Chimpanzee) : XM_001152204
Monodelphis
sp. (Opossum) : XM_001371068
Equus
sp. (Horse) : XM_001502826
HIX0005172
HIT000027728
(
AL832816
)
(Transcription factor 7; TCF-7; T-cell-specific transcription factor 1; T-cell factor 1; TCF-1;)
genome : 133,450,686 - 133,483,665 (32,980)
query : 1 - 2,741 (2,741/2,760)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
IPR028785 : Transcription factor 7
GO :
0005634 : Cellular Component : nucleus
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0008013 : Molecular Function : beta-catenin binding
0016055 : Biological Process : Wnt signaling pathway
0033153 : Biological Process : T cell receptor V(D)J recombination
0060070 : Biological Process : canonical Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000618257 (
ENST00000518887
)
(Transcription factor 7 isoform 4.)
genome : 133,450,892 - 133,477,953 (27,062)
query : 1 - 584 (584/584)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14.5, cyto 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000028896
(
AL834166
)
(Transcription factor 7; TCF-7; T-cell-specific transcription factor 1; T-cell factor 1; TCF-1;)
genome : 133,451,043 - 133,483,665 (32,623)
query : 1 - 5,331 (5,331/5,340)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
IPR028785 : Transcription factor 7
GO :
0005634 : Cellular Component : nucleus
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0008013 : Molecular Function : beta-catenin binding
0016055 : Biological Process : Wnt signaling pathway
0033153 : Biological Process : T cell receptor V(D)J recombination
0060070 : Biological Process : canonical Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 10.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000621944 (
ENST00000522653
)
(Transcription factor 7; TCF-7; T-cell-specific transcription factor 1; T-cell factor 1; TCF-1;)
genome : 133,451,043 - 133,483,665 (32,623)
query : 1 - 5,331 (5,331/5,340)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 10.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000620954 (
ENST00000521639
)
(Transcription factor 7 isoform 4.)
genome : 133,451,254 - 133,478,443 (27,190)
query : 1 - 539 (539/539)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000617242 (
ENST00000517851
)
(Transcription factor 7 isoform 4.)
genome : 133,451,254 - 133,477,995 (26,742)
query : 1 - 600 (600/600)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 9.5, mito_nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000319914 (
NM_201632
)
(Transcription factor 7 isoform 2.)
genome : 133,451,298 - 133,483,920 (32,623)
query : 1 - 2,833 (2,833/2,839)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000319916 (
NM_201634
)
(Transcription factor 7 isoform 4.)
genome : 133,451,298 - 133,483,920 (32,623)
query : 1 - 2,929 (2,929/2,935)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000320587 (
NM_213648
)
(Transcription factor 7 isoform 2.)
genome : 133,451,298 - 133,483,920 (32,623)
query : 1 - 3,067 (3,067/3,073)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000559994 (
NM_001134851
)
(Transcription factor 7 isoform 3.)
genome : 133,451,298 - 133,483,920 (32,623)
query : 1 - 3,316 (3,316/3,322)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000359840 (
ENST00000378560
)
(Transcription factor 7 isoform 4.)
genome : 133,451,298 - 133,483,920 (32,623)
query : 1 - 2,929 (2,929/2,929)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000530466 (
ENST00000432532
)
(Transcription factor 7 isoform 4.)
genome : 133,451,298 - 133,482,212 (30,915)
query : 1 - 1,198 (1,198/1,198)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, extr 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000621673 (
ENST00000522375
)
(Transcription factor 7 isoform 4.)
genome : 133,451,298 - 133,477,952 (26,655)
query : 1 - 557 (557/557)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15, cyto 9.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000620281 (
ENST00000520958
)
(Transcription factor 7 isoform 2.)
genome : 133,451,301 - 133,482,264 (30,964)
query : 1 - 1,408 (1,408/1,408)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000322355
(
X59870
)
(Transcription factor 7 isoform 2.)
genome : 133,451,316 - 133,483,920 (32,605)
query : 1 - 2,808 (2,808/2,814)
9 exons
identity = 0.993
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991)3'
coverage = 0.998
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
IPR028785 : Transcription factor 7
GO :
0005634 : Cellular Component : nucleus
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0008013 : Molecular Function : beta-catenin binding
0016055 : Biological Process : Wnt signaling pathway
0033153 : Biological Process : T cell receptor V(D)J recombination
0060070 : Biological Process : canonical Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000322356
(
X59871
)
(Transcription factor 7 isoform 4.)
genome : 133,451,316 - 133,483,920 (32,605)
query : 1 - 2,904 (2,904/2,910)
10 exons
identity = 0.993
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991)3'
coverage = 0.998
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
GO :
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000478415 (
ENST00000395023
)
(Transcription factor 7 isoform 2.)
genome : 133,451,316 - 133,483,920 (32,605)
query : 1 - 2,815 (2,815/2,815)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000322354
(
X59869
)
(Transcription factor 7 isoform 3.)
genome : 133,451,316 - 133,481,876 (30,561)
query : 1 - 1,254 (1,254/1,254)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993)3'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
GO :
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000618284 (
ENST00000518915
)
(Transcription factor 7 isoform 3.)
genome : 133,451,316 - 133,481,876 (30,561)
query : 1 - 1,254 (1,254/1,254)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000618801 (
ENST00000519447
)
(Transcription factor 7 isoform 4.)
genome : 133,451,332 - 133,478,438 (27,107)
query : 1 - 553 (553/553)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 8, nucl 6.5, cyto_nucl 6.33333, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000658847 (
NR_033449
)
(Transcription factor 7-like 2 isoform 12.)
genome : 133,451,350 - 133,483,920 (32,571)
query : 1 - 3,068 (3,068/3,074)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 14.5, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000014194
(
AK057580
)
(Transcription factor 7-like 2 isoform 12.)
genome : 133,451,350 - 133,483,664 (32,315)
query : 1 - 2,813 (2,813/2,813)
8 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
GO :
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000617134 (
ENST00000517741
)
(Transcription factor 7 isoform 4.)
genome : 133,451,350 - 133,477,956 (26,607)
query : 1 - 796 (796/796)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 8, nucl 6.5, cyto_nucl 6.33333, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000018397
(
AK093530
)
(Transcription factor 7 isoform 2.)
genome : 133,451,427 - 133,483,664 (32,238)
query : 1 - 2,682 (2,682/2,682)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
IPR028785 : Transcription factor 7
GO :
0005634 : Cellular Component : nucleus
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0008013 : Molecular Function : beta-catenin binding
0016055 : Biological Process : Wnt signaling pathway
0033153 : Biological Process : T cell receptor V(D)J recombination
0060070 : Biological Process : canonical Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000327373
(
Z47361
)
(Transcription factor 7 isoform 2.)
genome : 133,451,628 - 133,482,276 (30,649)
query : 1 - 1,115 (1,115/1,115)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995)3'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
GO :
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000327374
(
Z47362
)
(Transcription factor 7 isoform 4.)
genome : 133,451,628 - 133,482,276 (30,649)
query : 1 - 1,165 (1,165/1,165)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994)3'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
GO :
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, extr 2, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000619986 (
ENST00000520652
)
(Transcription factor 7; TCF-7; T-cell-specific transcription factor 1; T-cell factor 1; TCF-1;)
genome : 133,451,647 - 133,478,504 (26,858)
query : 1 - 651 (651/651)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.5, extr 9, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000429457
(
AK310591
)
(Transcription factor 7 isoform 2.)
genome : 133,459,309 - 133,482,640 (23,332)
query : 1 - 1,499 (1,499/1,499)
8 exons
identity = 0.998
5'(1.000;0.991;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
GO :
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000618402 (
ENST00000519037
)
(Transcription factor 7; TCF-7; T-cell-specific transcription factor 1; T-cell factor 1; TCF-1;)
genome : 133,459,309 - 133,478,505 (19,197)
query : 1 - 547 (547/547)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 17.5, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000621854 (
ENST00000522561
)
(Transcription factor 7 isoform 4.)
genome : 133,474,292 - 133,478,731 (4,440)
query : 1 - 769 (769/769)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 7, cyto_nucl 6, extr 3, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000249716
(
AK131428
)
(Transcription factor 7-like 2; HMG box transcription factor 4; T-cell-specific transcription factor 4; T-cell factor 4; TCF-4; mTCF-4;)
genome : 133,476,226 - 133,483,927 (7,702)
query : 1 - 3,366 (3,366/3,366)
6 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000623605 (
ENST00000524342
)
(Transcription factor 7; TCF-7; T-cell-specific transcription factor 1; T-cell factor 1; TCF-1;)
genome : 133,476,226 - 133,483,927 (7,702)
query : 1 - 3,366 (3,366/3,366)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000018550
(
AK093683
)
(Transcription factor 7 isoform 2.)
genome : 133,477,155 - 133,482,718 (5,564)
query : 1 - 1,965 (1,965/1,965)
5 exons
identity = 0.998
5'(0.996;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR024940 : Transcription factor TCF/LEF
GO :
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000618598 (
ENST00000519238
)
(Transcription factor 7 isoform 2.)
genome : 133,477,155 - 133,482,718 (5,564)
query : 1 - 1,965 (1,965/1,965)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000617246 (
ENST00000517855
)
(Transcription factor 7; TCF-7; T-cell-specific transcription factor 1; T-cell factor 1; TCF-1;)
genome : 133,477,876 - 133,482,398 (4,523)
query : 1 - 799 (799/799)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0005172
HIT000617191 (
ENST00000517799
)
(Transcription factor 7 isoform 2.)
genome : 133,477,907 - 133,481,994 (4,088)
query : 1 - 570 (570/570)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 10.5, cyto_nucl 10, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005172)
HIX0216724
HIT000619068 (
ENST00000519718
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 133,502,861 - 133,561,762 (58,902)
query : 1 - 483 (483/483)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, extr 3, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216724)
HIX0216714
HIT000489183
(
AK294559
)
Representative transcript
(Cyclin-dependent kinase-like 3 isoform 2.)
genome : 133,541,305 - 133,706,734 (165,430)
query : 1 - 1,744 (1,744/1,744)
10 exons
identity = 0.998
3'(0.996)5'
coverage = 1.000
EC number :
EC 2.7.11.22
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR029052 : Metallo-dependent phosphatase-like
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, pero 5, plas 3, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216714)
HIX0216714
HIT000619851 (
ENST00000520515
)
(Calcineurin-like phosphoesterase domain, apaH type containing protein.)
genome : 133,541,305 - 133,706,734 (165,430)
query : 1 - 1,744 (1,744/1,744)
10 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, pero 5, plas 3, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216714)
HIX0216714
HIT000492210
(
AK297586
)
(Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; PP2A-alpha; EC=3.1.3.16; Replication protein C; RP-C;)
genome : 133,541,645 - 133,706,735 (165,091)
query : 1 - 1,082 (1,082/1,082)
7 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR029052 : Metallo-dependent phosphatase-like
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, extr 9, nucl 4.5,
extr_plas 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216714)
HIX0216714
HIT000617789 (
ENST00000518409
)
(Calcineurin-like phosphoesterase domain, apaH type containing protein.)
genome : 133,541,645 - 133,706,735 (165,091)
query : 1 - 1,082 (1,082/1,082)
7 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, extr 9, nucl 4.5,
extr_plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216714)
HIX0184017
pHIT000009599 ( pHIT000009599 )
Representative transcript
(Hypothetical protein.)
genome : 132,073,032 - 132,073,436 (405)
query : 1 - 405 (405/405)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0184017)
CAGE tag :
H08BA35F0409,H10BA23K0710,H28BA81K1903
H28BA85N1505,H28BB14J0505
HIX0216382
pHIT000009638 ( pHIT000009638 )
(Conserved hypothetical protein.)
genome : 133,449,877 - 133,487,619 (37,743)
query : 1 - 1,482 (1,482/1,482)
14 exons
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
IPR028785 : Transcription factor 7
GO :
0005634 : Cellular Component : nucleus
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0008013 : Molecular Function : beta-catenin binding
0016055 : Biological Process : Wnt signaling pathway
0033153 : Biological Process : T cell receptor V(D)J recombination
0060070 : Biological Process : canonical Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216382)
CAGE tag :
H04BA67I1904,H04BB19G2209,H05BA71J0209
H05BB10D2305,H05BB79K1605
HIX0216382
pHIT000009640 ( pHIT000009640 )
(Conserved hypothetical protein.)
genome : 133,449,877 - 133,487,619 (37,743)
query : 1 - 1,389 (1,389/1,389)
13 exons
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
IPR028785 : Transcription factor 7
GO :
0005634 : Cellular Component : nucleus
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0008013 : Molecular Function : beta-catenin binding
0016055 : Biological Process : Wnt signaling pathway
0033153 : Biological Process : T cell receptor V(D)J recombination
0060070 : Biological Process : canonical Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216382)
CAGE tag :
H04BA07C1404,H08BA62O2005,H09BA17M1304
H22BA74E1703,H28BA18C1407
HIX0216382
pHIT000077341 ( pHIT000077341 )
(Conserved hypothetical protein.)
genome : 133,449,877 - 133,487,619 (37,743)
query : 1 - 1,200 (1,200/1,200)
11 exons
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
IPR028785 : Transcription factor 7
GO :
0005634 : Cellular Component : nucleus
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0008013 : Molecular Function : beta-catenin binding
0016055 : Biological Process : Wnt signaling pathway
0033153 : Biological Process : T cell receptor V(D)J recombination
0060070 : Biological Process : canonical Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216382)
CAGE tag :
H04BA67I1904,H04BB19G2209,H05BA71J0209
H05BB10D2305,H05BB79K1605
HIX0216382
pHIT000103598 ( pHIT000103598 )
(Conserved hypothetical protein.)
genome : 133,449,877 - 133,487,619 (37,743)
query : 1 - 1,545 (1,545/1,545)
14 exons
InterPro :
IPR009071 : High mobility group box domain
IPR013558 : CTNNB1 binding, N-teminal
IPR024940 : Transcription factor TCF/LEF
IPR028785 : Transcription factor 7
GO :
0005634 : Cellular Component : nucleus
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0008013 : Molecular Function : beta-catenin binding
0016055 : Biological Process : Wnt signaling pathway
0033153 : Biological Process : T cell receptor V(D)J recombination
0060070 : Biological Process : canonical Wnt signaling pathway
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216382)
CAGE tag :
T05R07F5AAEF
AC004039.1
132000001-132042420 F -
NCBI
AC004237.1
132042421-132080871 F -
NCBI
AC004775.1
132080872-132162270 F -
NCBI
AC004500.1
132162271-132239648 F -
NCBI
AC010240.7
132239649-132328366 F +
NCBI
AC113410.2
132328367-132450996 F -
NCBI
AC113345.2
132450997-132497628 F +
NCBI
AC010307.7
132497629-132676650 F +
NCBI
AC012614.8
132676651-132706179 F +
NCBI
AC010608.7
132706180-132916159 F +
NCBI
AC005195.1
132916160-132969855 F +
NCBI
AC004632.1
132969856-132991637 F -
NCBI
AC005571.1
132991638-133051957 F -
NCBI
AC005178.1
133051958-133129258 F +
NCBI
AC117534.2
133129259-133223713 F +
NCBI
AC025177.6
133223714-133314924 F +
NCBI
AC008608.7
133314925-133468481 F +
NCBI
AC011336.5
133468482-133496952 F +
NCBI
AC104109.3
133496953-133600000 F -
NCBI