bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0019652
HIT000087069
(
BC008431
)
(Delta-sarcoglycan isoform 2.)
genome : 155,135,063 - 156,016,348 (881,286)
query : 1 - 822 (822/856)
8 exons
identity = 0.990
5'(0.937)3'
coverage = 0.994
InterPro :
IPR006875 : Sarcoglycan complex subunit protein
IPR027661 : Delta-sarcoglycan
GO :
0016012 : Cellular Component : sarcoglycan complex
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, plas 6, cyto 6, mito 6, cyto_plas 6,
mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019652)
HIX0019652
HIT000617304 (
ENST00000517913
)
(Delta-sarcoglycan isoform 2.)
genome : 155,297,354 - 156,185,066 (887,713)
query : 1 - 1,412 (1,412/1,412)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12.5, extr_plas 9.5, extr 5.5, cyto 5, mito 3,
cyto_pero 3, E.R. 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019652)
HIX0019652
HIT000533356 (
ENST00000435422
)
(Delta-sarcoglycan; Delta-SG; 35 kDa dystrophin-associated glycoprotein; 35DAG;)
genome : 155,753,756 - 156,194,799 (441,044)
query : 1 - 9,755 (9,755/9,755)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, plas 8.5, mito_pero 7, extr_plas 6.5,
extr 3.5, E.R. 3, cyto 2, pero 2, lyso 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019652)
HIX0019652
HIT000054732
(
BX537948
)
(Delta-sarcoglycan; Delta-SG; 35 kDa dystrophin-associated glycoprotein; 35DAG;)
genome : 155,753,756 - 156,193,046 (439,291)
query : 1 - 8,004 (8,004/8,022)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR006875 : Sarcoglycan complex subunit protein
IPR027661 : Delta-sarcoglycan
GO :
0016012 : Cellular Component : sarcoglycan complex
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, plas 8.5, mito_pero 7, extr_plas 6.5,
extr 3.5, E.R. 3, cyto 2, pero 2, lyso 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019652)
HIX0019652
HIT000197382 (
NM_000337
)
(Delta-sarcoglycan; Delta-SG; 35 kDa dystrophin-associated glycoprotein; 35DAG;)
genome : 155,753,767 - 156,194,797 (441,031)
query : 1 - 9,788 (9,788/9,805)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, mito_pero 8.5, plas 6, extr 3, cyto 3,
E.R. 3, pero 3, cysk_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019652)
HIX0019652
HIT000559424 (
NM_001128209
)
(Delta-sarcoglycan; Delta-SG; 35 kDa dystrophin-associated glycoprotein; 35DAG;)
genome : 155,753,767 - 156,194,797 (441,031)
query : 1 - 9,742 (9,742/9,759)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, plas 8.5, mito_pero 7, extr_plas 6.5,
extr 3.5, E.R. 3, cyto 2, pero 2, lyso 2, E.R._golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019652)
HIX0019652
HIT000130666 (
ENST00000337851
)
(Delta-sarcoglycan; Delta-SG; 35 kDa dystrophin-associated glycoprotein; 35DAG;)
genome : 155,753,767 - 156,186,615 (432,849)
query : 1 - 1,606 (1,606/1,606)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, mito_pero 8.5, plas 6, extr 3, cyto 3,
E.R. 3, pero 3, cysk_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019652)
HIX0019652
HIT000214707 (
NM_172244
)
(Delta-sarcoglycan isoform 2.)
genome : 155,753,767 - 156,185,070 (431,304)
query : 1 - 1,573 (1,573/1,576)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12.5, extr_plas 9.5, extr 5.5, cyto 5, mito 3,
cyto_pero 3, E.R. 2.5, cyto_nucl 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019652)
HIX0019652
HIT000545335 (
ENST00000447401
)
(Delta-sarcoglycan isoform 2.)
genome : 155,753,767 - 156,185,068 (431,302)
query : 1 - 1,571 (1,571/1,571)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12.5, extr_plas 9.5, extr 5.5, cyto 5, mito 3,
cyto_pero 3, E.R. 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019652)
HIX0019652
HIT000038928
(
BC020740
)
Representative transcript
(Delta-sarcoglycan; Delta-SG; 35 kDa dystrophin-associated glycoprotein; 35DAG;)
genome : 155,754,174 - 156,186,611 (432,438)
query : 1 - 1,195 (1,195/1,220)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR006875 : Sarcoglycan complex subunit protein
IPR027661 : Delta-sarcoglycan
GO :
0016012 : Cellular Component : sarcoglycan complex
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, mito_pero 8.5, plas 6, extr 3, cyto 3,
E.R. 3, pero 3, cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019652)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK047384
Danio
sp. (Zebrafish) : BC095349
Gallus
sp. (Chicken) : CR405962
Pongo
sp. (Orangutan) : ENSPPYT00000018601
Tetraodon
sp. (Tetraodon) : GSTENT00014589001
Takifugu
sp. (Fugu) : SINFRUT00000151701
Macaca
sp. (Macaque) : XM_001113235
Monodelphis
sp. (Opossum) : XM_001369638
Equus
sp. (Horse) : XM_001503564
Pan
sp. (Chimpanzee) : XM_518056
Rattus
sp. (Rat) : XM_573076
Canis
sp. (Dog) : XM_849804
Bos
sp. (Cow) : XM_867609
HIX0019652
HIT000425591
(
AK292794
)
(Delta-sarcoglycan; Delta-SG; 35 kDa dystrophin-associated glycoprotein; 35DAG;)
genome : 155,754,175 - 156,186,611 (432,437)
query : 1 - 1,194 (1,194/1,194)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006875 : Sarcoglycan complex subunit protein
IPR027661 : Delta-sarcoglycan
GO :
0016012 : Cellular Component : sarcoglycan complex
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, mito_pero 8.5, plas 6, extr 3, cyto 3,
E.R. 3, pero 3, cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019652)
HIX0019652
HIT000220535
(
U58331
)
(Delta-sarcoglycan isoform 2.)
genome : 155,756,549 - 156,185,066 (428,518)
query : 1 - 1,088 (1,088/1,110)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR006875 : Sarcoglycan complex subunit protein
IPR027661 : Delta-sarcoglycan
GO :
0016012 : Cellular Component : sarcoglycan complex
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12.5, extr_plas 9.5, extr 5.5, cyto 5, mito 3,
cyto_pero 3, E.R. 2.5, cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019652)
HIX0019652
HIT000324893
(
X95191
)
(Delta-sarcoglycan; Delta-SG; 35 kDa dystrophin-associated glycoprotein; 35DAG;)
genome : 155,771,498 - 156,186,401 (414,904)
query : 3 - 873 (871/873)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR006875 : Sarcoglycan complex subunit protein
IPR027661 : Delta-sarcoglycan
GO :
0016012 : Cellular Component : sarcoglycan complex
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, mito_pero 8.5, plas 6, extr 3, cyto 3,
E.R. 3, pero 3, cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019652)
HIX0164419
HIT000341059_06
(
DQ069912
)
Representative transcript
(Hypothetical protein.)
genome : 156,086,321 - 156,087,425 (1,105)
query : 1 - 1,105 (1,105/1,105)
1 exon
identity = 0.992
3'(0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, cyto 13, nucl 11, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164419)
HIX0207281
HIT000620035 (
ENST00000520705
)
(Hypothetical short protein.)
genome : 156,131,069 - 156,166,823 (35,755)
query : 1 - 460 (460/460)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207281)
HIX0019652
HIT000049160
(
AK129889
)
(Hypothetical protein.)
genome : 156,187,491 - 156,189,345 (1,855)
query : 1 - 1,855 (1,855/1,855)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.1667, nucl 10, cyto 8,
cyto_pero 5.66667, mito_nucl 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019652)
HIX0019652
HIT000049339
(
AK130068
)
(Conserved hypothetical protein.)
genome : 156,191,618 - 156,193,045 (1,428)
query : 1 - 1,428 (1,428/1,428)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 7.5, cyto_nucl 6.5, cyto 2.5, mito 2,
golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019652)
HIX0019652
HIT000062079
(
AF010236
)
(Hypothetical short protein.)
genome : 156,193,131 - 156,194,499 (1,369)
query : 9 - 1,379 (1,371/1,379)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019652)
HIX0032078
HIT000715339_02
(
JF438008
)
(Protein phosphatase inhibitor 2.)
genome : 156,277,497 - 156,278,343 (847)
query : 1 - 847 (847/847)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR007062 : Protein phosphatase inhibitor 2 (IPP-2)
GO :
0004864 : Molecular Function : protein phosphatase inhibitor activity
0009966 : Biological Process : regulation of signal transduction
0043666 : Biological Process : regulation of phosphoprotein phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito 11, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032078)
HIX0032078
HIT000262343
(
BC066922
)
Representative transcript
(Protein phosphatase inhibitor 2.)
genome : 156,277,549 - 156,279,539 (1,991)
query : 1 - 1,991 (1,991/2,007)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR007062 : Protein phosphatase inhibitor 2 (IPP-2)
GO :
0004864 : Molecular Function : protein phosphatase inhibitor activity
0009966 : Biological Process : regulation of signal transduction
0043666 : Biological Process : regulation of phosphoprotein phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, mito 12, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032078)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ851823
Mus
sp. (Mouse) : BC100445
Pongo
sp. (Orangutan) : ENSPPYT00000029407
Monodelphis
sp. (Opossum) : XM_001375336
Rattus
sp. (Rat) : XR_007876
HIX0032078
HIT000660375 (
NR_038443
)
(Protein phosphatase inhibitor 2.)
genome : 156,277,549 - 156,279,539 (1,991)
query : 1 - 1,991 (1,991/2,007)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.999
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito 11, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032078)
HIX0032078
HIT000518415 (
ENST00000420481
)
(Protein phosphatase inhibitor 2.)
genome : 156,277,549 - 156,279,539 (1,991)
query : 1 - 1,991 (1,991/1,991)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito 11, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032078)
HIX0032078
HIT000621532_02 (
ENST00000522232
)
(Protein phosphatase inhibitor 2.)
genome : 156,277,574 - 156,278,185 (612)
query : 1 - 612 (612/612)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito 11, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032078)
HIX0032078
HIT000456060
(
DQ589529
)
(Non-protein coding transcript.)
genome : 156,277,809 - 156,277,838 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032078)
HIX0005349
HIT000212357 (
NM_138379
)
(T-cell immunoglobulin and mucin domain-containing protein 4 isoform 1 precursor.)
genome : 156,346,293 - 156,390,266 (43,974)
query : 1 - 1,369 (1,369/1,374)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 9, plas 8.5, extr_plas 8, extr 6.5,
cyto_pero 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005349)
HIX0005349
HIT000561718 (
NM_001146726
)
(T-cell immunoglobulin and mucin domain-containing protein 4 isoform 2 precursor.)
genome : 156,346,293 - 156,390,266 (43,974)
query : 1 - 1,285 (1,285/1,290)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 8, plas 7.5, extr_plas 7.5, extr 6.5,
cyto_pero 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005349)
HIX0005349
HIT000111174 (
ENST00000274532
)
(T-cell immunoglobulin and mucin domain-containing protein 4 isoform 1 precursor.)
genome : 156,346,293 - 156,390,266 (43,974)
query : 1 - 1,369 (1,369/1,369)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 9, plas 8.5, extr_plas 8, extr 6.5,
cyto_pero 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005349)
HIX0005349
HIT000034128
(
BC008988
)
Representative transcript
(T-cell immunoglobulin and mucin domain-containing protein 4 isoform 1 precursor.)
genome : 156,346,370 - 156,390,266 (43,897)
query : 1 - 1,292 (1,292/1,306)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.988;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 9, plas 8.5, extr_plas 8, extr 6.5,
cyto_pero 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005349)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719444
Mus
sp. (Mouse) : AY376716
Bos
sp. (Cow) : BT020787
Macaca
sp. (Macaque) : ENSMMUT00000033148
Pongo
sp. (Orangutan) : ENSPPYT00000018602
Rattus
sp. (Rat) : ENSRNOT00000059448
Monodelphis
sp. (Opossum) : XM_001379543
Pan
sp. (Chimpanzee) : XM_518057
Canis
sp. (Dog) : XM_546278
HIX0005349
HIT000505802 (
ENST00000406964
)
(T-cell immunoglobulin and mucin domain-containing protein 4 isoform 2 precursor.)
genome : 156,346,366 - 156,362,687 (16,322)
query : 1 - 581 (581/581)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, E.R. 5, nucl 4, cyto 2, lyso 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005349)
HIX0005349
HIT000050296
(
AK131025
)
(T-cell immunoglobulin and mucin domain-containing protein 4 isoform 2 precursor.)
genome : 156,346,366 - 156,362,660 (16,295)
query : 1 - 554 (554/554)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, E.R. 5, nucl 4, cyto 2, lyso 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005349)
HIX0005349
HIT000495961
(
AK301337
)
(T-cell immunoglobulin and mucin domain-containing protein 4 isoform 1 precursor.)
genome : 156,346,400 - 156,390,237 (43,838)
query : 1 - 1,149 (1,149/1,149)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.988;1.000;0.997;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 8, plas 7.5, extr_plas 7.5, extr 6.5,
cyto_pero 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005349)
HIX0005349
HIT000505853 (
ENST00000407087
)
(T-cell immunoglobulin and mucin domain-containing protein 4 isoform 2 precursor.)
genome : 156,346,400 - 156,390,233 (43,834)
query : 1 - 1,145 (1,145/1,145)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 8, plas 7.5, extr_plas 7.5, extr 6.5,
cyto_pero 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005349)
HIX0005349
HIT000431612
(
AK312746
)
(T-cell immunoglobulin and mucin domain-containing protein 4 isoform 1 precursor.)
genome : 156,346,468 - 156,390,237 (43,770)
query : 1 - 1,164 (1,164/1,164)
9 exons
identity = 0.997
3'(0.988;1.000;1.000;1.000;1.000;0.988;1.000;
0.997;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 9, plas 8.5, extr_plas 8, extr 6.5,
cyto_pero 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005349)
HIX0005349
HIT000721876
(
JX049980
)
(T-cell immunoglobulin and mucin domain-containing protein 4 isoform 1 precursor.)
genome : 156,346,468 - 156,390,209 (43,742)
query : 1 - 1,137 (1,137/1,137)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.988;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 9, plas 8.5, extr_plas 8, extr 6.5,
cyto_pero 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005349)
HIX0005350
HIT000492883
(
AK298259
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,456,424 - 156,486,130 (29,707)
query : 1 - 1,698 (1,698/1,698)
8 exons
identity = 0.988
3'(1.000;1.000;1.000;1.000;0.939;0.994;1.000;
0.995)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, plas 4, pero 3, lyso 2, cyto_pero 2,
cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0005350
HIT000621983 (
ENST00000522693
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,456,424 - 156,486,130 (29,707)
query : 1 - 1,713 (1,713/1,713)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, pero 4, plas 3, lyso 2, mito_pero 2,
cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0005350
HIT000063764
(
AF043724
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,456,437 - 156,485,970 (29,534)
query : 1 - 1,440 (1,440/1,440)
9 exons
identity = 0.979
3'(0.969;1.000;1.000;1.000;1.000;0.942;0.997;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, pero 8, lyso 3, plas 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0005350
HIT000622458 (
ENST00000523175
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,456,437 - 156,485,966 (29,530)
query : 1 - 1,449 (1,449/1,449)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, pero 8, lyso 3, plas 2, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0005350
HIT000036214
(
BC013325
)
Representative transcript
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,456,531 - 156,485,119 (28,589)
query : 4 - 1,476 (1,473/1,507)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.997
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, pero 8, lyso 3, plas 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC053400
Rattus
sp. (Rat) : BC061820
Bos
sp. (Cow) : BT020787
Canis
sp. (Dog) : ENSCAFT00000036042
Macaca
sp. (Macaque) : ENSMMUT00000040782
Pongo
sp. (Orangutan) : ENSPPYT00000018603
Monodelphis
sp. (Opossum) : XM_001379553
Pan
sp. (Chimpanzee) : XM_518058
HIX0005350
HIT000131882 (
ENST00000339252
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,456,527 - 156,485,487 (28,961)
query : 1 - 1,845 (1,845/1,845)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, pero 8, lyso 3, plas 2, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0005350
HIT000655031 (
NM_001173393
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,456,531 - 156,485,970 (29,440)
query : 1 - 1,359 (1,359/1,359)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, pero 8, lyso 3, plas 2, E.R. 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0005350
HIT000203994 (
NM_012206
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,456,531 - 156,485,487 (28,957)
query : 1 - 1,841 (1,841/1,841)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, pero 8, lyso 3, plas 2, E.R. 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0005350
HIT000485374 (
NM_001099414
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,456,531 - 156,485,487 (28,957)
query : 1 - 1,493 (1,493/1,493)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, pero 8, lyso 3, plas 2, E.R. 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0005350
HIT000523788 (
ENST00000425854
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,456,531 - 156,485,487 (28,957)
query : 1 - 1,807 (1,807/1,807)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, pero 4, plas 3, lyso 2, mito_pero 2,
cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0005350
HIT000643242 (
ENST00000544197
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,456,531 - 156,485,487 (28,957)
query : 1 - 1,493 (1,493/1,493)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, pero 8, lyso 3, plas 2, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0005350
HIT000267964
(
CR457114
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,456,744 - 156,484,954 (28,211)
query : 1 - 1,095 (1,095/1,095)
8 exons
identity = 0.999
3'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, pero 8, lyso 3, plas 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0005350
HIT000653456
(
HQ412639
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,456,744 - 156,484,954 (28,211)
query : 1 - 1,080 (1,080/1,080)
8 exons
identity = 0.984
3'(1.000;1.000;1.000;1.000;1.000;0.942;0.997;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, pero 8, lyso 3, plas 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0005350
HIT000653457
(
HQ412640
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,456,744 - 156,484,954 (28,211)
query : 1 - 1,080 (1,080/1,080)
8 exons
identity = 0.983
3'(1.000;1.000;1.000;1.000;1.000;0.939;0.997;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, pero 8, lyso 3, plas 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0005350
HIT000721874
(
JX049978
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,456,744 - 156,484,954 (28,211)
query : 1 - 1,080 (1,080/1,080)
8 exons
identity = 0.983
3'(0.991;1.000;1.000;1.000;1.000;0.942;0.997;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, pero 8, lyso 3, plas 2, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0005350
HIT000617038 (
ENST00000517644
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,456,751 - 156,476,160 (19,410)
query : 1 - 402 (402/402)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_plas 8.66667, plas 8.5, cyto 8.5, cyto_nucl 6,
pero 6, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0005350
HIT000653458
(
HQ412641
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,464,232 - 156,484,954 (20,723)
query : 1 - 963 (963/963)
6 exons
identity = 0.980
3'(0.993;1.000;1.000;0.939;0.997;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, plas 7, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0005350
HIT000618117 (
ENST00000518745
)
(Hepatitis A virus cellular receptor 1; HAVcr-1; Kidney injury molecule 1; KIM-1; T-cell immunoglobulin and mucin domain-containing protein 1; TIMD-1; T-cell membrane protein 1; TIM-1; TIM; Precursor;)
genome : 156,479,376 - 156,485,407 (6,032)
query : 1 - 774 (774/774)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005350)
HIX0216495
HIT000049415
(
AK130144
)
Representative transcript
(Conserved hypothetical protein.)
genome : 156,512,844 - 156,531,705 (18,862)
query : 1 - 1,726 (1,726/1,726)
5 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, mito 6, cyto 3, E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216495)
HIX0207222
HIT000617102 (
ENST00000517708
)
(Hypothetical short protein.)
genome : 156,531,799 - 156,541,911 (10,113)
query : 1 - 275 (275/275)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207222)
HIX0216274
HIT000038999
(
BC020843
)
Representative transcript
(Conserved hypothetical protein.)
genome : 156,533,158 - 156,536,103 (2,946)
query : 1 - 983 (983/1,012)
2 exons
identity = 0.991
3'(0.989;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216274)
HIX0216274
HIT000622187 (
ENST00000522902
)
(Conserved hypothetical protein.)
genome : 156,533,131 - 156,536,103 (2,973)
query : 1 - 1,010 (1,010/1,010)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216274)
HIX0216274
HIT000616758 (
ENST00000517358
)
(Conserved hypothetical protein.)
genome : 156,533,665 - 156,534,313 (649)
query : 1 - 566 (566/566)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 7, extr 5, cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216274)
HIX0005353
HIT000016498
(
AK091631
)
(Conserved hypothetical protein.)
genome : 156,560,307 - 156,564,006 (3,700)
query : 1 - 2,392 (2,392/2,392)
3 exons
identity = 0.996
3'(0.998;0.993;0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, cyto 6.5, cyto_nucl 6.5, nucl 3.5, mito 2,
pero 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005353)
HIX0005353
HIT000032320
(
BC005250
)
Representative transcript
(Mediator complex, subunit Med7 family protein.)
genome : 156,562,358 - 156,569,875 (7,518)
query : 1 - 1,206 (1,206/1,235)
3 exons
identity = 0.994
3'(0.979;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR009244 : Mediator complex, subunit Med7
GO :
0001104 : Molecular Function : RNA polymerase II transcription cofactor activity
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0016592 : Cellular Component : mediator complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, mito 8.5, cyto_mito 8.5, cyto 7.5, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005353)
HIX0005353
HIT000086708
(
BC006968
)
(Mediator complex, subunit Med7 family protein.)
genome : 156,562,358 - 156,569,875 (7,518)
query : 1 - 1,206 (1,206/1,235)
3 exons
identity = 0.994
3'(0.979;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR009244 : Mediator complex, subunit Med7
GO :
0001104 : Molecular Function : RNA polymerase II transcription cofactor activity
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0016592 : Cellular Component : mediator complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, mito 8.5, cyto_mito 8.5, cyto 7.5, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005353)
HIX0005353
HIT000112706 (
ENST00000286317
)
(Mediator complex, subunit Med7 family protein.)
genome : 156,564,423 - 156,570,195 (5,773)
query : 1 - 2,402 (2,402/2,402)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, mito 8.5, cyto_mito 8.5, cyto 7.5, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005353)
HIX0005353
HIT000427259
(
AK308393
)
(Mediator complex, subunit Med7 family protein.)
genome : 156,565,334 - 156,569,886 (4,553)
query : 1 - 1,181 (1,181/1,181)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR009244 : Mediator complex, subunit Med7
GO :
0001104 : Molecular Function : RNA polymerase II transcription cofactor activity
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0016592 : Cellular Component : mediator complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, mito 8.5, cyto_mito 8.5, cyto 7.5, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005353)
HIX0005353
HIT000201028 (
NM_004270
)
(Mediator complex, subunit Med7 family protein.)
genome : 156,565,452 - 156,569,921 (4,470)
query : 1 - 1,099 (1,099/1,116)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, mito 8.5, cyto_mito 8.5, cyto 7.5, E.R. 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005353)
HIX0005353
HIT000485549 (
NM_001100816
)
(Mediator complex, subunit Med7 family protein.)
genome : 156,565,452 - 156,569,786 (4,335)
query : 1 - 1,383 (1,383/1,400)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, mito 8.5, cyto_mito 8.5, cyto 7.5, E.R. 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005353)
HIX0005353
HIT000518277 (
ENST00000420343
)
(Mediator complex, subunit Med7 family protein.)
genome : 156,565,453 - 156,569,786 (4,334)
query : 1 - 1,382 (1,382/1,382)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, mito 8.5, cyto_mito 8.5, cyto 7.5, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005353)
HIX0005353
HIT000063057
(
AF031383
)
(Mediator complex, subunit Med7 family protein.)
genome : 156,565,731 - 156,569,878 (4,148)
query : 3 - 778 (776/778)
2 exons
identity = 0.995
3'(1.000;0.917)5'
coverage = 0.997
InterPro :
IPR009244 : Mediator complex, subunit Med7
GO :
0001104 : Molecular Function : RNA polymerase II transcription cofactor activity
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0016592 : Cellular Component : mediator complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, mito 8.5, cyto_mito 8.5, cyto 7.5, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005353)
HIX0005353
HIT000069410
(
AF104251
)
(Mediator complex, subunit Med7 family protein.)
genome : 156,565,741 - 156,566,442 (702)
query : 1 - 702 (702/702)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR009244 : Mediator complex, subunit Med7
GO :
0001104 : Molecular Function : RNA polymerase II transcription cofactor activity
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0016592 : Cellular Component : mediator complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, mito 8.5, cyto_mito 8.5, cyto 7.5, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005353)
HIX0005353
HIT000100288
(
BT007368
)
(Mediator complex, subunit Med7 family protein.)
genome : 156,565,743 - 156,566,442 (700)
query : 1 - 700 (700/702)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.997
InterPro :
IPR009244 : Mediator complex, subunit Med7
GO :
0001104 : Molecular Function : RNA polymerase II transcription cofactor activity
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0016592 : Cellular Component : mediator complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, mito 8.5, cyto_mito 8.5, cyto 7.5, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005353)
HIX0005353
HIT000267859
(
CR457009
)
(Mediator complex, subunit Med7 family protein.)
genome : 156,565,745 - 156,566,442 (698)
query : 1 - 698 (698/702)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.994
InterPro :
IPR009244 : Mediator complex, subunit Med7
GO :
0001104 : Molecular Function : RNA polymerase II transcription cofactor activity
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0016592 : Cellular Component : mediator complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, mito 8.5, cyto_mito 8.5, cyto 7.5, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005353)
HIX0005353
HIT000268569
(
CR541696
)
(Mediator complex, subunit Med7 family protein.)
genome : 156,565,744 - 156,566,442 (699)
query : 1 - 699 (699/699)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR009244 : Mediator complex, subunit Med7
GO :
0001104 : Molecular Function : RNA polymerase II transcription cofactor activity
0006357 : Biological Process : regulation of transcription from RNA polymerase II promoter
0016592 : Cellular Component : mediator complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, mito 8.5, cyto_mito 8.5, cyto 7.5, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005353)
HIX0005353
HIT000623552 (
ENST00000524289
)
(Mediator complex, subunit Med7 family protein.)
genome : 156,565,857 - 156,586,030 (20,174)
query : 1 - 979 (979/979)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_mito 10, mito 7.5, plas 6, nucl 2,
E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005353)
HIX0032329
HIT000043486
(
AK123613
)
Representative transcript
(Conserved hypothetical protein.)
genome : 156,566,549 - 156,569,839 (3,291)
query : 1 - 3,292 (3,292/3,292)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7.5, cyto_nucl 5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032329)
HIX0024849
HIT000621082 (
ENST00000521769
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,569,944 - 156,649,973 (80,030)
query : 1 - 571 (571/571)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0005354
HIT000116307 (
ENST00000302938
)
(Protein FAM71B;)
genome : 156,588,857 - 156,593,275 (4,419)
query : 1 - 2,515 (2,515/2,515)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005354)
HIX0005354
HIT000039366
(
BC022035
)
(Protein FAM71B;)
genome : 156,589,345 - 156,593,278 (3,934)
query : 10 - 2,039 (2,030/2,054)
2 exons
identity = 0.999
3'(0.998;0.999)5'
coverage = 0.996
InterPro :
IPR022168 : Protein of unknown function DUF3699
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005354)
HIX0005354
HIT000039937
(
BC025409
)
Representative transcript
(Protein FAM71B;)
genome : 156,589,345 - 156,593,275 (3,931)
query : 6 - 2,032 (2,027/2,047)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.998
InterPro :
IPR022168 : Protein of unknown function DUF3699
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005354)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : BC082044
Bos
sp. (Cow) : BC109702
Canis
sp. (Dog) : ENSCAFT00000027861
Pongo
sp. (Orangutan) : ENSPPYT00000018606
Mus
sp. (Mouse) : NM_001013783
Macaca
sp. (Macaque) : XM_001113357
Pan
sp. (Chimpanzee) : XM_001136225
Equus
sp. (Horse) : XM_001500948
HIX0005354
HIT000212120 (
NM_130899
)
(Protein FAM71B;)
genome : 156,589,345 - 156,593,279 (3,935)
query : 1 - 2,031 (2,031/2,046)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005354)
HIX0005354
HIT000039927
(
BC025397
)
(Protein FAM71B;)
genome : 156,589,350 - 156,593,275 (3,926)
query : 6 - 2,027 (2,022/2,042)
2 exons
identity = 0.999
3'(0.998;0.999)5'
coverage = 0.998
InterPro :
IPR022168 : Protein of unknown function DUF3699
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005354)
HIX0005354
HIT000040061
(
BC025998
)
(Protein FAM71B;)
genome : 156,589,350 - 156,593,275 (3,926)
query : 6 - 2,027 (2,022/2,042)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 0.998
InterPro :
IPR022168 : Protein of unknown function DUF3699
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005354)
HIX0005354
HIT000014157
(
AK057543
)
(Protein FAM71B;)
genome : 156,589,351 - 156,593,275 (3,925)
query : 1 - 2,021 (2,021/2,021)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
InterPro :
IPR022168 : Protein of unknown function DUF3699
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005354)
HIX0005354
HIT000386222
(
AY973323
)
(Protein FAM71B;)
genome : 156,589,458 - 156,593,179 (3,722)
query : 1 - 1,818 (1,818/1,818)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR022168 : Protein of unknown function DUF3699
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005354)
HIX0005354
HIT000080322
(
AF465821
)
(Protein FAM71B.)
genome : 156,592,076 - 156,593,255 (1,180)
query : 1 - 1,178 (1,178/1,178)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
InterPro :
IPR022168 : Protein of unknown function DUF3699
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 18, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005354)
HIX0024849
HIT000520777 (
ENST00000422843
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,607,837 - 156,682,201 (74,365)
query : 1 - 4,528 (4,528/4,528)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0024849
HIT000335002
(
BC094701
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,607,848 - 156,622,916 (15,069)
query : 1 - 1,100 (1,100/1,142)
2 exons
identity = 0.995
5'(1.000;0.994)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13.5, extr 5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0024849
HIT000621908 (
ENST00000522616
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,607,848 - 156,622,918 (15,071)
query : 1 - 1,102 (1,102/1,102)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13.5, extr 5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0024849
HIT000619890 (
ENST00000520555
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; IL-2-inducible T-cell kinase; Kinase EMT; Kinase TLK; T-cell-specific kinase;)
genome : 156,607,851 - 156,638,522 (30,672)
query : 1 - 606 (606/606)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 10.5, mito 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0024849
HIT000329557
(
AB209622
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,607,854 - 156,682,109 (74,256)
query : 1 - 5,869 (5,869/5,869)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000980 : SH2 domain
IPR001452 : SH3 domain
IPR001562 : Zinc finger, Btk motif
IPR001849 : Pleckstrin homology domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, E.R._mito 6.5, mito 4.5, pero 4, E.R. 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0024849
HIT000618758 (
ENST00000519402
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,607,854 - 156,682,109 (74,256)
query : 1 - 5,869 (5,869/5,869)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, E.R._mito 6.5, mito 4.5, pero 4, E.R. 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0024849
HIT000617171 (
ENST00000517779
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,607,878 - 156,640,708 (32,831)
query : 1 - 567 (567/587)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.966
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 5, mito 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0024849
HIT000100512
(
D13720
)
Representative transcript
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,607,907 - 156,682,109 (74,203)
query : 1 - 4,366 (4,366/4,366)
17 exons
identity = 1.000
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000980 : SH2 domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR001452 : SH3 domain
IPR001562 : Zinc finger, Btk motif
IPR001849 : Pleckstrin homology domain
IPR008266 : Tyrosine-protein kinase, active site
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : AF016326
Bos
sp. (Cow) : BC153237
Equus
sp. (Horse) : ENSECAT00000010148
Monodelphis
sp. (Opossum) : ENSMODT00000010772
Oryzias
sp. (Medaka) : ENSORLT00000009740
Pongo
sp. (Orangutan) : ENSPPYT00000018607
Rattus
sp. (Rat) : ENSRNOT00000009211
Tetraodon
sp. (Tetraodon) : GSTENT00004811001
Mus
sp. (Mouse) : L00619
Takifugu
sp. (Fugu) : SINFRUT00000152778
Macaca
sp. (Macaque) : XM_001113468
Pan
sp. (Chimpanzee) : XM_001136073
Gallus
sp. (Chicken) : XM_414568
Canis
sp. (Dog) : XM_546277
HIX0024849
HIT000202231 (
NM_005546
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,607,907 - 156,682,109 (74,203)
query : 1 - 4,366 (4,366/4,366)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, cysk 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0024849
HIT000339246
(
BC109077
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,607,916 - 156,680,151 (72,236)
query : 1 - 2,399 (2,399/2,402)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000980 : SH2 domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR001452 : SH3 domain
IPR001562 : Zinc finger, Btk motif
IPR001849 : Pleckstrin homology domain
IPR008266 : Tyrosine-protein kinase, active site
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0024849
HIT000339247
(
BC109078
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,607,916 - 156,680,151 (72,236)
query : 1 - 2,399 (2,399/2,399)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000980 : SH2 domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR001452 : SH3 domain
IPR001562 : Zinc finger, Btk motif
IPR001849 : Pleckstrin homology domain
IPR008266 : Tyrosine-protein kinase, active site
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0024849
HIT000431712
(
AK312846
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,607,938 - 156,679,688 (71,751)
query : 1 - 1,914 (1,914/1,914)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000980 : SH2 domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR001452 : SH3 domain
IPR001562 : Zinc finger, Btk motif
IPR001849 : Pleckstrin homology domain
IPR008266 : Tyrosine-protein kinase, active site
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0024849
HIT000498233
(
AK303609
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,607,941 - 156,680,134 (72,194)
query : 1 - 1,413 (1,413/1,413)
9 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;0.952;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 12.5, mito 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0207255
HIT000618731 (
ENST00000519375
)
(Conserved hypothetical protein.)
genome : 156,626,253 - 156,651,390 (25,138)
query : 1 - 569 (569/569)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207255)
HIX0024849
HIT000619108 (
ENST00000519759
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,649,759 - 156,667,141 (17,383)
query : 1 - 540 (540/540)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15.5, nucl 7.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0024849
HIT000619516 (
ENST00000520173
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,667,103 - 156,671,285 (4,183)
query : 1 - 831 (831/831)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 11.8333, cyto_plas 10.3333, mito 7,
nucl 3.5, E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0024849
HIT000619098 (
ENST00000519749
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,668,601 - 156,682,195 (13,595)
query : 1 - 3,375 (3,375/3,375)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 8, nucl 3, cyto 3, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0024849
HIT000430520
(
AK311654
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,668,601 - 156,680,086 (11,486)
query : 1 - 1,266 (1,266/1,266)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 8, nucl 3, cyto 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0024849
HIT000054978
(
BX538196
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,670,686 - 156,682,195 (11,510)
query : 1 - 3,192 (3,192/3,209)
5 exons
identity = 0.999
5'(1.000;0.995;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 8, nucl 3, cyto 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0024849
HIT000623193 (
ENST00000523926
)
(Tyrosine-protein kinase ITK/TSK; EC=2.7.10.2; Interleukin-2-inducible T-cell kinase; IL-2-inducible T-cell kinase; Kinase EMT; T-cell-specific kinase; Tyrosine-protein kinase Lyk;)
genome : 156,671,901 - 156,672,986 (1,086)
query : 1 - 996 (996/996)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 13.5, extr 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024849)
HIX0207221
HIT000617028 (
ENST00000517634
)
(DDE superfamily endonuclease, CENP-B-like protein.)
genome : 156,687,132 - 156,693,635 (6,504)
query : 1 - 911 (911/911)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207221)
HIX0005355
pHIT000010111 ( pHIT000010111 )
(Conserved hypothetical protein.)
genome : 156,692,866 - 156,770,589 (77,724)
query : 1 - 3,444 (3,444/3,444)
25 exons
InterPro :
IPR008081 : Cytoplasmic FMR1-interacting
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
CAGE tag :
H04BA83C0307
HIX0005355
HIT000621929 (
ENST00000522637
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,693,138 - 156,731,282 (38,145)
query : 1 - 580 (580/580)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, extr 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000618369 (
ENST00000519002
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,693,146 - 156,731,790 (38,645)
query : 1 - 1,293 (1,293/1,293)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 4.5, cyto_nucl 4.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000618611 (
ENST00000519252
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,693,149 - 156,734,872 (41,724)
query : 1 - 966 (966/966)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 4.5, cyto_nucl 4.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000619758 (
ENST00000520419
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,693,184 - 156,727,901 (34,718)
query : 1 - 999 (999/999)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 4.5, cyto_nucl 4.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000621719 (
ENST00000522423
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,693,721 - 156,729,898 (36,178)
query : 1 - 924 (924/924)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 4.5, cyto_nucl 4.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0216601
HIT000617834 (
ENST00000518456
)
(Hypothetical short protein.)
genome : 156,696,385 - 156,698,586 (2,202)
query : 1 - 377 (377/377)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, golg 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216601)
HIX0005355
HIT000617241 (
ENST00000517850
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,704,069 - 156,731,308 (27,240)
query : 1 - 914 (914/914)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 14, extr 11, cyto 6, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000617887 (
ENST00000518511
)
(Conserved hypothetical protein.)
genome : 156,727,826 - 156,730,131 (2,306)
query : 1 - 409 (409/409)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, mito 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000620265 (
ENST00000520942
)
(Conserved hypothetical protein.)
genome : 156,738,046 - 156,741,378 (3,333)
query : 1 - 771 (771/771)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000026186
(
AL161999
)
Representative transcript
(Cytoplasmic FMR1-interacting protein 2.)
genome : 156,738,668 - 156,820,216 (81,549)
query : 13 - 3,069 (3,057/3,087)
22 exons
identity = 0.997
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.980;0.948;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 0.996
InterPro :
IPR008081 : Cytoplasmic FMR1-interacting
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.3333, cyto_mito 9.33333,
nucl 7.5, mito_pero 4.83333, pero 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000533781 (
ENST00000435847
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,738,670 - 156,822,606 (83,937)
query : 13 - 5,457 (5,445/5,457)
22 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.980;0.948;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 9, cyto_nucl 9, mito_nucl 9, mito 8.5, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000193934_01
(
L47738
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,741,384 - 156,820,215 (78,832)
query : 1 - 2,881 (2,881/2,881)
20 exons
identity = 0.972
5'(1.000;0.976;1.000;0.993;0.987;0.994;0.961;
0.948;1.000;0.891;0.882;0.989;0.993;1.000;
1.000;1.000;1.000;0.955;0.966;0.992)3'
coverage = 1.000
InterPro :
IPR008081 : Cytoplasmic FMR1-interacting
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11, extr 10, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000333812
(
BC014405
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,750,944 - 156,820,232 (69,289)
query : 171 - 2,469 (2,299/2,490)
16 exons
identity = 0.997
5'(0.986;1.000;0.980;0.948;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.930
InterPro :
IPR008081 : Cytoplasmic FMR1-interacting
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 14, nucl 4, extr 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000620283 (
ENST00000520960
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,750,927 - 156,755,018 (4,092)
query : 1 - 578 (578/578)
5 exons
identity = 0.990
5'(1.000;1.000;1.000;0.980;0.895)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 6, nucl 5.5, extr 5, cyto 5,
cyto_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000617930 (
ENST00000518555
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,752,608 - 156,755,057 (2,450)
query : 1 - 745 (745/745)
2 exons
identity = 0.997
5'(1.000;0.976)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, cyto 7, mito 7, cyto_mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000619763 (
ENST00000520424
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,754,933 - 156,768,102 (13,170)
query : 1 - 579 (579/579)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 12, cyto_nucl 11, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0018064
HIT000315364 (
NM_001001343
)
(Fibronectin type III domain-containing protein 9.)
genome : 156,768,607 - 156,772,729 (4,123)
query : 1 - 2,126 (2,126/2,126)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, plas 5.5, cyto_golg 5.5, mito 4.5, pero 4,
extr_plas 4, E.R._mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018064)
HIX0018064
HIT000119349 (
ENST00000312349
)
(Fibronectin type III domain-containing protein 9.)
genome : 156,768,608 - 156,772,729 (4,122)
query : 1 - 2,125 (2,125/2,125)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, plas 5.5, cyto_golg 5.5, mito 4.5, pero 4,
extr_plas 4, E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018064)
HIX0018064
HIT000039631
(
BC022570
)
(Fibronectin type III domain-containing protein 9.)
genome : 156,769,040 - 156,772,679 (3,640)
query : 3 - 1,647 (1,645/1,662)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 0.999
InterPro :
IPR003961 : Fibronectin type III
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, plas 5.5, cyto_golg 5.5, mito 4.5, pero 4,
extr_plas 4, E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018064)
HIX0018064
HIT000422498
(
AK289701
)
Representative transcript
(Fibronectin type III domain-containing protein 9.)
genome : 156,769,686 - 156,772,673 (2,988)
query : 1 - 991 (991/992)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 0.999
InterPro :
IPR003961 : Fibronectin type III
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, plas 5.5, cyto_golg 5.5, mito 4.5, pero 4,
extr_plas 4, E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018064)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK081240
Bos
sp. (Cow) : ENSBTAT00000011736
Equus
sp. (Horse) : ENSECAT00000012367
Gallus
sp. (Chicken) : ENSGALT00000040728
Monodelphis
sp. (Opossum) : ENSMODT00000032889
Oryzias
sp. (Medaka) : ENSORLT00000020024
Rattus
sp. (Rat) : ENSRNOT00000008559
Macaca
sp. (Macaque) : XM_001113497
Pan
sp. (Chimpanzee) : XM_001138114
Canis
sp. (Dog) : XM_546276
HIX0018064
HIT000620109 (
ENST00000520782
)
(Fibronectin type III domain-containing protein 9.)
genome : 156,770,004 - 156,772,572 (2,569)
query : 1 - 732 (732/732)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, plas 5.5, E.R._mito 4.5, mito 4, pero 4,
extr_plas 4, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018064)
HIX0005355
HIT000622177 (
ENST00000522892
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,788,413 - 156,810,588 (22,176)
query : 1 - 583 (583/583)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 14, cyto 9.5, cyto_nucl 7.83333,
cyto_plas 5.66667, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005356
HIT000009740
(
AK026466
)
Representative transcript
(Conserved hypothetical protein.)
genome : 156,789,358 - 156,791,839 (2,482)
query : 1 - 2,144 (2,144/2,161)
2 exons
identity = 0.987
5'(0.993;0.980)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, plas 3, cyto 3, pero 3, cyto_pero 3,
cyto_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005356)
HIX0032341
HIT000618849 (
ENST00000519499
)
(Hypothetical protein.)
genome : 156,789,623 - 156,887,086 (97,464)
query : 1 - 741 (741/741)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032341)
HIX0032341
HIT000250015
(
AK172852
)
Representative transcript
(Conserved hypothetical protein.)
genome : 156,790,390 - 156,792,509 (2,120)
query : 1 - 1,993 (1,993/2,015)
2 exons
identity = 0.998
3'(0.998;0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, cyto 10.5, cyto_nucl 8.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032341)
HIX0032341
HIT000609510 (
ENST00000509655
)
(Conserved hypothetical protein.)
genome : 156,790,390 - 156,792,509 (2,120)
query : 1 - 1,992 (1,992/1,992)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, cyto 10.5, cyto_nucl 8.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032341)
HIX0005355
HIT000049246
(
AK129975
)
(Conserved hypothetical protein.)
genome : 156,802,749 - 156,811,947 (9,199)
query : 1 - 1,932 (1,932/1,932)
2 exons
identity = 0.997
5'(0.999;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 4.5, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000608372 (
ENST00000508443
)
(Conserved hypothetical protein.)
genome : 156,802,749 - 156,811,947 (9,199)
query : 1 - 1,932 (1,932/1,932)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 4.5, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0207280
HIT000619992 (
ENST00000520658
)
(Conserved hypothetical protein.)
genome : 156,807,022 - 156,811,948 (4,927)
query : 11 - 545 (535/545)
3 exons
identity = 0.993
3'(1.000;0.953;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10.5, nucl 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207280)
HIX0005355
HIT000622664 (
ENST00000523383
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,810,240 - 156,820,241 (10,002)
query : 1 - 916 (916/916)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16, nucl 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000623325 (
ENST00000524058
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,810,246 - 156,816,636 (6,391)
query : 1 - 562 (562/562)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12.5, extr 8, nucl 4, mito 4,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000619013 (
ENST00000519663
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,810,264 - 156,820,241 (9,978)
query : 1 - 892 (892/892)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16, nucl 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000622062 (
ENST00000522775
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,811,314 - 156,817,646 (6,333)
query : 1 - 582 (582/582)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3.5, cyto_nucl 3, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000622169 (
ENST00000522884
)
(Cytoplasmic FMR1-interacting family protein.)
genome : 156,811,314 - 156,816,550 (5,237)
query : 1 - 579 (579/579)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 12, extr 9, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000249887
(
AK172724
)
(Conserved hypothetical protein.)
genome : 156,820,217 - 156,822,595 (2,379)
query : 1 - 2,379 (2,379/2,379)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, cyto 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000262354
(
BC066933
)
(Conserved hypothetical protein.)
genome : 156,820,785 - 156,822,603 (1,819)
query : 1 - 1,819 (1,819/1,873)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, cyto 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000070875
(
AF132197
)
(Conserved hypothetical protein.)
genome : 156,820,984 - 156,822,593 (1,610)
query : 13 - 1,623 (1,611/1,634)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, cyto 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000040228
(
BC026892
)
(Conserved hypothetical protein.)
genome : 156,821,288 - 156,822,596 (1,309)
query : 2 - 1,311 (1,310/1,326)
1 exon
identity = 0.987
5'(0.987)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, cyto 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0005355
HIT000431023
(
AK312157
)
(Conserved hypothetical protein.)
genome : 156,821,291 - 156,821,588 (298)
query : 1 - 298 (298/298)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, cyto 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
HIX0022561
HIT000016331
(
AK091464
)
(Disintegrin and metalloproteinase domain-containing protein 19; ADAM 19; EC=3.4.24.-; Meltrin-beta; Metalloprotease and disintegrin dendritic antigen marker; MADDAM; Precursor;)
genome : 156,822,542 - 157,002,783 (180,242)
query : 1 - 2,839 (2,839/2,847)
23 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.988)5'
coverage = 0.997
EC number :
EC 3.4.24.-
InterPro :
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR002870 : Peptidase M12B, propeptide
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, E.R. 5, mito 3, pero 3, mito_pero 3,
E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
HIX0022561
HIT000617341 (
ENST00000517951
)
(Disintegrin and metalloproteinase domain-containing protein 19; ADAM 19; EC=3.4.24.-; Meltrin-beta; Metalloprotease and disintegrin dendritic antigen marker; MADDAM; Precursor;)
genome : 156,822,542 - 157,002,783 (180,242)
query : 1 - 2,839 (2,839/2,839)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 7, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
HIX0022561
HIT000528636 (
ENST00000430702
)
(Disintegrin and metalloproteinase domain-containing protein 19; ADAM 19; EC=3.4.24.-; Meltrin-beta; Metalloprotease and disintegrin dendritic antigen marker; MADDAM; Precursor;)
genome : 156,822,574 - 157,002,768 (180,195)
query : 1 - 2,782 (2,782/2,782)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, extr_plas 10, extr 7, pero 4, cyto 3, mito 3,
cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
HIX0207291
HIT000620554 (
ENST00000521237
)
(Conserved hypothetical protein.)
genome : 156,849,447 - 156,849,881 (435)
query : 1 - 435 (435/435)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 10, extr_plas 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207291)
HIX0005358
HIT000485350 (
NM_001099287
)
(Magnesium transporter NIPA4; Ichthyin; NIPA-like protein 4; Non-imprinted in Prader-Willi/Angelman syndrome region protein 4;)
genome : 156,887,027 - 156,901,730 (14,704)
query : 1 - 3,279 (3,279/3,297)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005358)
HIX0005358
HIT000654897 (
NM_001172292
)
(Magnesium transporter NIPA4 isoform 2.)
genome : 156,887,027 - 156,901,730 (14,704)
query : 1 - 3,222 (3,222/3,232)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005358)
HIX0005358
HIT000119223 (
ENST00000311946
)
(Magnesium transporter NIPA4; Ichthyin; NIPA-like protein 4; Non-imprinted in Prader-Willi/Angelman syndrome region protein 4;)
genome : 156,887,027 - 156,901,725 (14,699)
query : 1 - 3,274 (3,274/3,274)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005358)
HIX0005358
HIT000491596
(
AK296972
)
(Magnesium transporter NIPA4; Ichthyin; NIPA-like protein 4; Non-imprinted in Prader-Willi/Angelman syndrome region protein 4;)
genome : 156,887,027 - 156,900,108 (13,082)
query : 1 - 1,600 (1,600/1,600)
5 exons
identity = 0.998
5'(0.997;1.000;1.000;0.994;0.999)3'
coverage = 1.000
InterPro :
IPR008521 : Magnesium transporter NIPA
GO :
0015095 : Molecular Function : magnesium ion transmembrane transporter activity
0015693 : Biological Process : magnesium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005358)
HIX0005358
HIT000533423 (
ENST00000435489
)
(Magnesium transporter NIPA4 isoform 2.)
genome : 156,887,027 - 156,900,108 (13,082)
query : 1 - 1,600 (1,600/1,600)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005358)
HIX0005358
HIT000009432
(
AK026158
)
Representative transcript
(Magnesium transporter NIPA4; Ichthyin; NIPA-like protein 4; Non-imprinted in Prader-Willi/Angelman syndrome region protein 4;)
genome : 156,887,224 - 156,901,725 (14,502)
query : 2 - 3,078 (3,077/3,094)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.994;0.999)3'
coverage = 1.000
InterPro :
IPR008521 : Magnesium transporter NIPA
GO :
0015095 : Molecular Function : magnesium ion transmembrane transporter activity
0015693 : Biological Process : magnesium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005358)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK035561
Danio
sp. (Zebrafish) : BC076554
Equus
sp. (Horse) : ENSECAT00000000779
Pongo
sp. (Orangutan) : ENSPPYT00000018612
Pan
sp. (Chimpanzee) : ENSPTRT00000032298
Takifugu
sp. (Fugu) : SINFRUT00000176033
Rattus
sp. (Rat) : XM_001069047
Monodelphis
sp. (Opossum) : XM_001379656
Gallus
sp. (Chicken) : XM_414566
Canis
sp. (Dog) : XM_546275
Bos
sp. (Cow) : XM_610787
Macaca
sp. (Macaque) : XR_013128
HIX0005358
HIT000427696
(
AK308830
)
(Magnesium transporter NIPA4 isoform 2.)
genome : 156,887,224 - 156,894,976 (7,753)
query : 2 - 1,151 (1,150/1,151)
4 exons
identity = 0.996
5'(1.000;1.000;1.000;0.993)3'
coverage = 0.999
InterPro :
IPR008521 : Magnesium transporter NIPA
GO :
0015095 : Molecular Function : magnesium ion transmembrane transporter activity
0015693 : Biological Process : magnesium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8, cyto 8, cyto_nucl 8, plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005358)
HIX0005358
HIT000620707 (
ENST00000521390
)
(Magnesium transporter NIPA4 isoform 2.)
genome : 156,887,224 - 156,894,976 (7,753)
query : 1 - 1,151 (1,151/1,151)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8, cyto 8, cyto_nucl 8, plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005358)
HIX0005358
HIT000618513 (
ENST00000519150
)
(Magnesium transporter NIPA4; Ichthyin; NIPA-like protein 4; Non-imprinted in Prader-Willi/Angelman syndrome region protein 4;)
genome : 156,887,263 - 156,899,443 (12,181)
query : 1 - 788 (788/788)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 8.5, cyto 8, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005358)
HIX0005358
HIT000428108
(
AK309242
)
(Conserved hypothetical protein.)
genome : 156,887,337 - 156,898,689 (11,353)
query : 1 - 883 (883/883)
5 exons
identity = 0.997
5'(1.000;1.000;0.982;1.000;0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2, mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005358)
HIX0005358
HIT000619293 (
ENST00000519946
)
(Conserved hypothetical protein.)
genome : 156,887,337 - 156,894,113 (6,777)
query : 1 - 548 (548/567)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.966
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005358)
HIX0005358
HIT000386455
(
BC105708
)
(Magnesium transporter NIPA4; Ichthyin; NIPA-like protein 4; Non-imprinted in Prader-Willi/Angelman syndrome region protein 4;)
genome : 156,890,226 - 156,900,263 (10,038)
query : 1 - 1,349 (1,349/1,349)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR008521 : Magnesium transporter NIPA
GO :
0015095 : Molecular Function : magnesium ion transmembrane transporter activity
0015693 : Biological Process : magnesium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005358)
HIX0005358
HIT000386457
(
BC105710
)
(Magnesium transporter NIPA4; Ichthyin; NIPA-like protein 4; Non-imprinted in Prader-Willi/Angelman syndrome region protein 4;)
genome : 156,890,226 - 156,900,263 (10,038)
query : 1 - 1,349 (1,349/1,349)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;0.994;0.999)3'
coverage = 1.000
InterPro :
IPR008521 : Magnesium transporter NIPA
GO :
0015095 : Molecular Function : magnesium ion transmembrane transporter activity
0015693 : Biological Process : magnesium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005358)
HIX0005358
HIT000386456
(
BC105709
)
(Magnesium transporter NIPA4; Ichthyin; NIPA-like protein 4; Non-imprinted in Prader-Willi/Angelman syndrome region protein 4;)
genome : 156,890,231 - 156,900,263 (10,033)
query : 1 - 1,344 (1,344/1,344)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR008521 : Magnesium transporter NIPA
GO :
0015095 : Molecular Function : magnesium ion transmembrane transporter activity
0015693 : Biological Process : magnesium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005358)
HIX0005358
HIT000070820
(
AF131815
)
(Hypothetical protein.)
genome : 156,900,115 - 156,901,730 (1,616)
query : 1 - 1,616 (1,616/1,634)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 11.5, cyto_nucl 9.33333,
cyto_pero 6.66667, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005358)
HIX0022561
HIT000211252 (
NM_033274
)
(Disintegrin and metalloproteinase domain-containing protein 19 preproprotein.)
genome : 156,904,312 - 157,002,831 (98,520)
query : 1 - 6,529 (6,529/6,554)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, golg 3.5, E.R._golg 3.5, E.R. 2.5, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
HIX0022561
HIT000090900
(
BC024214
)
(Disintegrin and metalloproteinase domain-containing protein 19; ADAM 19; EC=3.4.24.-; Meltrin-beta; Metalloprotease and disintegrin dendritic antigen marker; MADDAM; Precursor;)
genome : 156,904,312 - 156,926,672 (22,361)
query : 19 - 1,848 (1,830/1,873)
11 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.990
EC number :
EC 3.4.24.-
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR006586 : ADAM, cysteine-rich
IPR013032 : EGF-like, conserved site
IPR018358 : Disintegrin, conserved site
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
HIX0022561
HIT000092940
(
BC033132
)
(Disintegrin and metalloproteinase domain-containing protein 19; ADAM 19; EC=3.4.24.-; Meltrin-beta; Metalloprotease and disintegrin dendritic antigen marker; MADDAM; Precursor;)
genome : 156,904,312 - 156,926,672 (22,361)
query : 19 - 1,848 (1,830/1,873)
11 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.990
EC number :
EC 3.4.24.-
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR006586 : ADAM, cysteine-rich
IPR013032 : EGF-like, conserved site
IPR018358 : Disintegrin, conserved site
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
HIX0022561
HIT000325796
(
Y13786
)
(Disintegrin and metalloproteinase domain-containing protein 19; ADAM 19; EC=3.4.24.-; Meltrin-beta; Metalloprotease and disintegrin dendritic antigen marker; MADDAM; Precursor;)
genome : 156,904,312 - 157,002,768 (98,457)
query : 14 - 6,477 (6,464/6,488)
23 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994)5'
coverage = 0.998
EC number :
EC 3.4.24.-
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR013032 : EGF-like, conserved site
IPR018358 : Disintegrin, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, golg 4.5, E.R._golg 4.5, E.R. 3.5, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
HIX0022561
HIT000023796
(
AL049415
)
(Conserved hypothetical protein.)
genome : 156,904,318 - 156,905,551 (1,234)
query : 1 - 1,233 (1,233/1,249)
1 exon
identity = 0.992
3'(0.992)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 5, pero 5, plas 3, E.R._mito 3,
mito_pero 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
HIX0022561
HIT000107109 (
ENST00000257527
)
(Disintegrin and metalloproteinase domain-containing protein 19; ADAM 19; EC=3.4.24.-; Meltrin-beta; Metalloprotease and disintegrin dendritic antigen marker; MADDAM; Precursor;)
genome : 156,904,312 - 157,002,783 (98,472)
query : 1 - 6,481 (6,481/6,481)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, golg 3.5, E.R._golg 3.5, E.R. 2.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
HIX0022561
HIT000477445 (
ENST00000394020
)
(Disintegrin and metalloproteinase domain-containing protein 19; ADAM 19; EC=3.4.24.-; Meltrin-beta; Metalloprotease and disintegrin dendritic antigen marker; MADDAM; Precursor;)
genome : 156,904,312 - 157,002,768 (98,457)
query : 1 - 6,472 (6,472/6,472)
23 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.976)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, golg 3.5, E.R._golg 3.5, E.R. 2.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
HIX0022561
HIT000616774 (
ENST00000517374
)
(Disintegrin and metalloproteinase domain-containing protein 19; ADAM 19; EC=3.4.24.-; Meltrin-beta; Metalloprotease and disintegrin dendritic antigen marker; MADDAM; Precursor;)
genome : 156,904,312 - 156,926,672 (22,361)
query : 19 - 1,847 (1,829/1,847)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.990
EC number :
EC 3.4.24.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
HIX0032318
HIT000018402
(
AK093535
)
Representative transcript
(Hypothetical protein.)
genome : 156,904,313 - 156,906,494 (2,182)
query : 1 - 2,180 (2,180/2,180)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10, nucl 9, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032318)
HIX0022561
HIT000077008
(
AF311317
)
Representative transcript
(Disintegrin and metalloproteinase domain-containing protein 19; ADAM 19; EC=3.4.24.-; Meltrin-beta; Metalloprotease and disintegrin dendritic antigen marker; MADDAM; Precursor;)
genome : 156,907,455 - 157,002,740 (95,286)
query : 1 - 3,295 (3,295/3,295)
23 exons
identity = 0.999
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR013032 : EGF-like, conserved site
IPR018358 : Disintegrin, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, golg 3.5, E.R._golg 3.5, E.R. 2.5, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK147549
Bos
sp. (Cow) : BT026144
Canis
sp. (Dog) : ENSCAFT00000027507
Equus
sp. (Horse) : ENSECAT00000019198
Monodelphis
sp. (Opossum) : ENSMODT00000010625
Oryzias
sp. (Medaka) : ENSORLT00000009293
Oryzias
sp. (Medaka) : ENSORLT00000015318
Pongo
sp. (Orangutan) : ENSPPYT00000018613
Rattus
sp. (Rat) : ENSRNOT00000008184
Tetraodon
sp. (Tetraodon) : GSTENT00031661001
Takifugu
sp. (Fugu) : SINFRUT00000127746
Macaca
sp. (Macaque) : XM_001105246
Pan
sp. (Chimpanzee) : XM_001137856
Gallus
sp. (Chicken) : XM_414565
Danio
sp. (Zebrafish) : XM_694823
HIX0022561
HIT000617296 (
ENST00000517905
)
(Disintegrin and metalloproteinase domain-containing protein 19; ADAM 19; EC=3.4.24.-; Meltrin-beta; Metalloprotease and disintegrin dendritic antigen marker; MADDAM; Precursor;)
genome : 156,908,235 - 157,002,749 (94,515)
query : 1 - 3,312 (3,312/3,312)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10, extr_plas 10, extr 8, pero 5, cyto 3, mito 3,
cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
HIX0022561
HIT000071014
(
AF134707
)
(Disintegrin and metalloproteinase domain-containing protein 19; ADAM 19; EC=3.4.24.-; Meltrin-beta; Metalloprotease and disintegrin dendritic antigen marker; MADDAM; Precursor;)
genome : 156,908,235 - 156,964,958 (56,724)
query : 1 - 2,971 (2,971/2,971)
19 exons
identity = 0.995
3'(0.981;1.000;1.000;1.000;1.000;1.000;0.995;
0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR013032 : EGF-like, conserved site
IPR018358 : Disintegrin, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9, cyto_nucl 8.33333, plas 6.5, nucl 6.5,
cyto_mito 5.83333, extr_plas 5.5, extr 3.5, E.R. 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
HIX0022561
HIT000077508
(
AF326918
)
(Disintegrin and metalloproteinase domain-containing protein 19; ADAM 19; EC=3.4.24.-; Meltrin-beta; Metalloprotease and disintegrin dendritic antigen marker; MADDAM; Precursor;)
genome : 156,908,442 - 157,002,749 (94,308)
query : 1 - 3,108 (3,108/3,108)
22 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.995;
0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.988;
0.986)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR013032 : EGF-like, conserved site
IPR018358 : Disintegrin, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10, extr_plas 9.5, extr 7, pero 5, cyto 3,
mito 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
HIX0022561
HIT000427048
(
AK308182
)
(Disintegrin and metalloproteinase domain-containing protein 19; ADAM 19; EC=3.4.24.-; Meltrin-beta; Metalloprotease and disintegrin dendritic antigen marker; MADDAM; Precursor;)
genome : 156,915,326 - 157,002,783 (87,458)
query : 1 - 2,575 (2,575/2,575)
21 exons
identity = 1.000
3'(1.000;0.988;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR013032 : EGF-like, conserved site
IPR018358 : Disintegrin, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 14, plas 8, extr_plas 7, extr 4, nucl 1, cyto 1,
mito 1, E.R. 1, cyto_nucl 1, lyso 1, golg 1, E.R._mito 1,
cyto_mito 1, E.R._golg 1, cyto_golg 1, mito_nucl 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
HIX0032452
HIT000096896
(
BC041850
)
Representative transcript
(Hypothetical short protein.)
genome : 156,973,563 - 156,977,695 (4,133)
query : 1 - 4,134 (4,134/4,149)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 6, cyto_nucl 5.5, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032452)
HIX0021137
HIT000008526
(
AK025252
)
Representative transcript
(Conserved hypothetical protein.)
genome : 156,984,097 - 156,996,106 (12,010)
query : 1 - 1,928 (1,928/1,950)
3 exons
identity = 0.982
3'(0.747;0.988;0.995)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 10, mito 4, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021137)
HIX0207230
HIT000617440 (
ENST00000518054
)
(Conserved hypothetical protein.)
genome : 156,992,972 - 156,996,106 (3,135)
query : 1 - 1,845 (1,845/1,845)
2 exons
identity = 0.999
5'(0.999;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.5, cyto 6.5, nucl 5.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207230)
HIX0022561
HIT000619101 (
ENST00000519752
)
(Disintegrin and metalloproteinase domain-containing protein 19; ADAM 19; EC=3.4.24.-; Meltrin-beta; Metalloprotease and disintegrin dendritic antigen marker; MADDAM; Precursor;)
genome : 156,997,454 - 157,002,765 (5,312)
query : 1 - 690 (690/690)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, extr 8, cyto 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022561)
HIX0207219
HIT000616987 (
ENST00000517591
)
(Ribosomal protein S3Ae family protein.)
genome : 157,031,715 - 157,032,645 (931)
query : 1 - 306 (306/306)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 7, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207219)
HIX0024779
HIT000058720
(
AB022083
)
Representative transcript
(Transcription factor SOX-30;)
genome : 157,052,687 - 157,079,372 (26,686)
query : 10 - 3,218 (3,209/3,239)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.991
InterPro :
IPR009071 : High mobility group box domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15.8333, cyto 9.5,
cyto_golg 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024779)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB064989
Mus
sp. (Mouse) : AY005801
Bos
sp. (Cow) : BC114054
Canis
sp. (Dog) : ENSCAFT00000027489
Equus
sp. (Horse) : ENSECAT00000017525
Rattus
sp. (Rat) : ENSRNOT00000008184
Monodelphis
sp. (Opossum) : XM_001379683
Pan
sp. (Chimpanzee) : XM_518064
HIX0024779
HIT000058734
(
AB022441
)
(Transcription factor SOX-30 isoform b.)
genome : 157,052,687 - 157,079,372 (26,686)
query : 10 - 2,725 (2,716/2,746)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.989
InterPro :
IPR009071 : High mobility group box domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14, cyto_golg 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024779)
HIX0024779
HIT000203558 (
NM_007017
)
(Transcription factor SOX-30 isoform b.)
genome : 157,052,687 - 157,079,428 (26,742)
query : 1 - 2,772 (2,772/2,787)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14, cyto_golg 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024779)
HIX0024779
HIT000318076 (
NM_178424
)
(Transcription factor SOX-30;)
genome : 157,052,687 - 157,079,428 (26,742)
query : 1 - 3,265 (3,265/3,280)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15.8333, cyto 9.5,
cyto_golg 5.66667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024779)
HIX0024779
HIT000109524 (
ENST00000265007
)
(Transcription factor SOX-30;)
genome : 157,052,687 - 157,079,428 (26,742)
query : 1 - 3,265 (3,265/3,265)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15.8333, cyto 9.5,
cyto_golg 5.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024779)
HIX0024779
HIT000119038 (
ENST00000311371
)
(Transcription factor SOX-30 isoform b.)
genome : 157,052,687 - 157,079,372 (26,686)
query : 1 - 2,716 (2,716/2,716)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14, cyto_golg 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024779)
HIX0024779
HIT000496786
(
AK302162
)
(Transcription factor SOX-30;)
genome : 157,053,183 - 157,098,488 (45,306)
query : 1 - 1,666 (1,666/1,666)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024779)
HIX0024779
HIT000618796 (
ENST00000519442
)
(Transcription factor SOX-30;)
genome : 157,053,183 - 157,098,488 (45,306)
query : 1 - 1,666 (1,666/1,666)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024779)
HIX0024779
HIT000427195
(
AK308329
)
(Transcription factor SOX-30;)
genome : 157,053,186 - 157,079,376 (26,191)
query : 1 - 2,714 (2,714/2,714)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024779)
HIX0024779
HIT000051121
(
BC033492
)
(Transcription factor SOX-30;)
genome : 157,053,303 - 157,079,428 (26,126)
query : 1 - 2,649 (2,649/2,703)
5 exons
identity = 1.000
3'(1.000;1.000;0.994;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15.8333, cyto 9.5,
cyto_golg 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024779)
HIX0024779
HIT000384991
(
AK225861
)
(Transcription factor SOX-30 isoform b.)
genome : 157,053,305 - 157,079,407 (26,103)
query : 1 - 1,503 (1,503/1,534)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.980
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024779)
HIX0184135
pHIT000103850 ( pHIT000103850 )
Representative transcript
(Conserved hypothetical protein.)
genome : 157,095,180 - 157,098,847 (3,668)
query : 1 - 324 (324/324)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0184135)
CAGE tag :
T05R095C1E07
HIX0024779
HIT000093723
(
BC035142
)
(Hypothetical protein.)
genome : 157,097,409 - 157,098,445 (1,037)
query : 3 - 1,039 (1,037/1,070)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 14, cyto_nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024779)
HIX0024779
HIT000011898
(
AK055284
)
(Conserved hypothetical protein.)
genome : 157,097,402 - 157,098,447 (1,046)
query : 3 - 1,048 (1,046/1,048)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 14, cyto_nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024779)
HIX0183555
HIT000561201 (
NM_001145132
)
(Conserved hypothetical protein.)
genome : 157,098,561 - 157,107,161 (8,601)
query : 1 - 696 (696/708)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 9, mito 8, cyto 4.5, extr 4,
E.R._mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0183555)
HIX0183555
HIT000508019 (
ENST00000409999
)
(Conserved hypothetical protein.)
genome : 157,098,561 - 157,107,151 (8,591)
query : 1 - 686 (686/686)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 9, mito 8, cyto 4.5, extr 4,
E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0183555)
HIX0183555
pHIT000010119 ( pHIT000010119 )
Representative transcript
(Conserved hypothetical protein.)
genome : 157,098,623 - 157,107,007 (8,385)
query : 1 - 516 (516/516)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0183555)
CAGE tag :
H40BB82K0501
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK162162
Bos
sp. (Cow) : BC149549
Canis
sp. (Dog) : ENSCAFT00000035164
Equus
sp. (Horse) : ENSECAT00000021163
Macaca
sp. (Macaque) : ENSMMUT00000003169
Pongo
sp. (Orangutan) : ENSPPYT00000018614
Pan
sp. (Chimpanzee) : ENSPTRT00000032306
Rattus
sp. (Rat) : XM_001065286
Monodelphis
sp. (Opossum) : XM_001380452
HIX0005360
HIT000621383 (
ENST00000522076
)
(Transcription factor SOX-30;)
genome : 157,109,993 - 157,117,274 (7,282)
query : 1 - 428 (428/428)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 8, mito_pero 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005360)
HIX0121495
HIT000459824
(
DQ593293
)
Representative transcript
(Non-protein coding transcript.)
genome : 157,115,620 - 157,115,650 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0121495)
HIX0005360
HIT000022501
(
AK097647
)
Representative transcript
(Transcription factor SOX-30;)
genome : 157,117,240 - 157,118,907 (1,668)
query : 1 - 1,668 (1,668/1,668)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 9.5, cyto_nucl 8.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005360)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XR_022787
HIX0005361
HIT000013703
(
AK057089
)
Representative transcript
(Conserved hypothetical protein.)
genome : 157,142,734 - 157,144,683 (1,950)
query : 1 - 1,950 (1,950/1,950)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 13.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005361)
HIX0005362
HIT000104363 (
ENST00000231198
)
(Probable tRNA(His) guanylyltransferase; EC=2.7.7.79; Interphase cytoplasmic foci protein 45; tRNA-histidine guanylyltransferase;)
genome : 157,158,205 - 157,168,456 (10,252)
query : 1 - 3,107 (3,107/3,107)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 8, pero 4, E.R._mito 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
HIX0005362
HIT000206732 (
NM_017872
)
(Probable tRNA(His) guanylyltransferase; EC=2.7.7.79; Interphase cytoplasmic foci protein 45; tRNA-histidine guanylyltransferase;)
genome : 157,158,323 - 157,166,772 (8,450)
query : 1 - 1,305 (1,305/1,320)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 8, pero 4, E.R._mito 4, mito_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
HIX0005362
HIT000254829
(
AY463216
)
(Probable tRNA(His) guanylyltransferase; EC=2.7.7.79; Interphase cytoplasmic foci protein 45; tRNA-histidine guanylyltransferase;)
genome : 157,158,323 - 157,166,772 (8,450)
query : 1 - 1,305 (1,305/1,320)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007537 : tRNAHis guanylyltransferase Thg1
IPR024956 : tRNAHis guanylyltransferase catalytic domain
IPR025845 : Thg1 C-terminal domain
GO :
0000287 : Molecular Function : magnesium ion binding
0006400 : Biological Process : tRNA modification
0008193 : Molecular Function : tRNA guanylyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 8, pero 4, E.R._mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
HIX0005362
HIT000003028
(
AK000553
)
(Probable tRNA(His) guanylyltransferase; EC=2.7.7.79; Interphase cytoplasmic foci protein 45; tRNA-histidine guanylyltransferase;)
genome : 157,158,421 - 157,166,772 (8,352)
query : 1 - 1,207 (1,207/1,233)
6 exons
identity = 0.998
5'(0.995;1.000;1.000;1.000;0.981;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 8, pero 4, E.R._mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
HIX0005362
HIT000499214
(
AK304590
)
(Probable tRNA(His) guanylyltransferase; EC=2.7.7.79; Interphase cytoplasmic foci protein 45; tRNA-histidine guanylyltransferase;)
genome : 157,158,428 - 157,166,586 (8,159)
query : 3 - 921 (919/921)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR007537 : tRNAHis guanylyltransferase Thg1
IPR025845 : Thg1 C-terminal domain
GO :
0000287 : Molecular Function : magnesium ion binding
0006400 : Biological Process : tRNA modification
0008193 : Molecular Function : tRNA guanylyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13, mito 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
HIX0005362
HIT000330899
(
AK223119
)
(Probable tRNA(His) guanylyltransferase; EC=2.7.7.79; Interphase cytoplasmic foci protein 45; tRNA-histidine guanylyltransferase;)
genome : 157,158,428 - 157,167,443 (9,016)
query : 1 - 1,868 (1,868/1,868)
6 exons
identity = 0.997
5'(0.991;1.000;1.000;1.000;0.991;0.997)3'
coverage = 1.000
InterPro :
IPR007537 : tRNAHis guanylyltransferase Thg1
IPR024956 : tRNAHis guanylyltransferase catalytic domain
IPR025845 : Thg1 C-terminal domain
GO :
0000287 : Molecular Function : magnesium ion binding
0006400 : Biological Process : tRNA modification
0008193 : Molecular Function : tRNA guanylyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 8, pero 4, E.R._mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
HIX0005362
HIT000620970 (
ENST00000521655
)
(Probable tRNA(His) guanylyltransferase; EC=2.7.7.79; Interphase cytoplasmic foci protein 45; tRNA-histidine guanylyltransferase;)
genome : 157,158,428 - 157,166,586 (8,159)
query : 1 - 919 (919/919)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13, mito 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
HIX0005362
HIT000025265
(
AL136669
)
(Probable tRNA(His) guanylyltransferase; EC=2.7.7.79; Interphase cytoplasmic foci protein 45; tRNA-histidine guanylyltransferase;)
genome : 157,158,433 - 157,166,768 (8,336)
query : 5 - 1,195 (1,191/1,216)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.995
InterPro :
IPR007537 : tRNAHis guanylyltransferase Thg1
IPR024956 : tRNAHis guanylyltransferase catalytic domain
IPR025845 : Thg1 C-terminal domain
GO :
0000287 : Molecular Function : magnesium ion binding
0006400 : Biological Process : tRNA modification
0008193 : Molecular Function : tRNA guanylyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 8, pero 4, E.R._mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
HIX0005362
HIT000050808
(
BC023521
)
(Probable tRNA(His) guanylyltransferase; EC=2.7.7.79; Interphase cytoplasmic foci protein 45; tRNA-histidine guanylyltransferase;)
genome : 157,158,431 - 157,166,775 (8,345)
query : 1 - 1,200 (1,200/1,215)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.991;1.000)3'
coverage = 0.999
InterPro :
IPR007537 : tRNAHis guanylyltransferase Thg1
IPR024956 : tRNAHis guanylyltransferase catalytic domain
IPR025845 : Thg1 C-terminal domain
GO :
0000287 : Molecular Function : magnesium ion binding
0006400 : Biological Process : tRNA modification
0008193 : Molecular Function : tRNA guanylyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 8, pero 4, E.R._mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
HIX0005362
HIT000004937
(
AK021663
)
Representative transcript
(Probable tRNA(His) guanylyltransferase; EC=2.7.7.79; Interphase cytoplasmic foci protein 45; tRNA-histidine guanylyltransferase;)
genome : 157,158,446 - 157,167,910 (9,465)
query : 1 - 2,263 (2,263/2,263)
7 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;0.991;0.993;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 8, pero 4, E.R._mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720720
Mus
sp. (Mouse) : AK016076
Danio
sp. (Zebrafish) : BC085384
Rattus
sp. (Rat) : BC087596
Bos
sp. (Cow) : BC122826
Tetraodon
sp. (Tetraodon) : CR642845
Equus
sp. (Horse) : ENSECAT00000014085
Macaca
sp. (Macaque) : ENSMMUT00000002513
Oryzias
sp. (Medaka) : ENSORLT00000009305
Pongo
sp. (Orangutan) : ENSPPYT00000018615
Pan
sp. (Chimpanzee) : ENSPTRT00000032307
Takifugu
sp. (Fugu) : SINFRUT00000127751
Monodelphis
sp. (Opossum) : XM_001369676
Canis
sp. (Dog) : XM_536453
HIX0005362
HIT000268351
(
CR533503
)
(Probable tRNA(His) guanylyltransferase; EC=2.7.7.79; Interphase cytoplasmic foci protein 45; tRNA-histidine guanylyltransferase;)
genome : 157,158,449 - 157,166,659 (8,211)
query : 1 - 1,066 (1,066/1,066)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007537 : tRNAHis guanylyltransferase Thg1
IPR024956 : tRNAHis guanylyltransferase catalytic domain
IPR025845 : Thg1 C-terminal domain
GO :
0000287 : Molecular Function : magnesium ion binding
0006400 : Biological Process : tRNA modification
0008193 : Molecular Function : tRNA guanylyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 8, pero 4, E.R._mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
HIX0005362
HIT000030474
(
BC001523
)
(Probable tRNA(His) guanylyltransferase; EC=2.7.7.79; Interphase cytoplasmic foci protein 45; tRNA-histidine guanylyltransferase;)
genome : 157,158,451 - 157,166,772 (8,322)
query : 1 - 1,177 (1,177/1,199)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007537 : tRNAHis guanylyltransferase Thg1
IPR024956 : tRNAHis guanylyltransferase catalytic domain
IPR025845 : Thg1 C-terminal domain
GO :
0000287 : Molecular Function : magnesium ion binding
0006400 : Biological Process : tRNA modification
0008193 : Molecular Function : tRNA guanylyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
HIX0005362
HIT000030696
(
BC001852
)
(Probable tRNA(His) guanylyltransferase; EC=2.7.7.79; Interphase cytoplasmic foci protein 45; tRNA-histidine guanylyltransferase;)
genome : 157,158,451 - 157,166,772 (8,322)
query : 1 - 1,177 (1,177/1,199)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007537 : tRNAHis guanylyltransferase Thg1
IPR024956 : tRNAHis guanylyltransferase catalytic domain
IPR025845 : Thg1 C-terminal domain
GO :
0000287 : Molecular Function : magnesium ion binding
0006400 : Biological Process : tRNA modification
0008193 : Molecular Function : tRNA guanylyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
HIX0005362
HIT000069621
(
AF110136
)
(Probable tRNA(His) guanylyltransferase; EC=2.7.7.79; Interphase cytoplasmic foci protein 45; tRNA-histidine guanylyltransferase;)
genome : 157,160,002 - 157,161,728 (1,727)
query : 1 - 197 (197/198)
2 exons
identity = 0.975
5'(0.980;0.973)3'
coverage = 0.995
InterPro :
IPR007537 : tRNAHis guanylyltransferase Thg1
IPR024956 : tRNAHis guanylyltransferase catalytic domain
GO :
0000287 : Molecular Function : magnesium ion binding
0006400 : Biological Process : tRNA modification
0008193 : Molecular Function : tRNA guanylyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
HIX0216653
HIT000711573 (
ENST00000599823
)
(Conserved hypothetical protein.)
genome : 157,160,003 - 157,161,727 (1,725)
query : 1 - 192 (192/192)
2 exons
identity = 0.985
3'(0.980;0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15, nucl 6.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216653)
HIX0005362
HIT000006629
(
AK023355
)
(Probable tRNA(His) guanylyltransferase; EC=2.7.7.79; Interphase cytoplasmic foci protein 45; tRNA-histidine guanylyltransferase;)
genome : 157,160,019 - 157,167,748 (7,730)
query : 1 - 1,780 (1,780/1,780)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR007537 : tRNAHis guanylyltransferase Thg1
IPR024956 : tRNAHis guanylyltransferase catalytic domain
IPR025845 : Thg1 C-terminal domain
GO :
0000287 : Molecular Function : magnesium ion binding
0006400 : Biological Process : tRNA modification
0008193 : Molecular Function : tRNA guanylyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
HIX0005362
HIT000622852 (
ENST00000523575
)
(Probable tRNA(His) guanylyltransferase; EC=2.7.7.79; Interphase cytoplasmic foci protein 45; tRNA-histidine guanylyltransferase;)
genome : 157,164,918 - 157,166,706 (1,789)
query : 1 - 576 (576/576)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
HIX0005362
HIT000067365
(
AF086486
)
(Conserved hypothetical protein.)
genome : 157,166,368 - 157,166,772 (405)
query : 3 - 407 (405/416)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.995
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, cyto_nucl 14, mito 7, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005362)
HIX0200724
HIT000112705 (
ENST00000286307
)
(U7 snRNA-associated Sm-like protein LSm11;)
genome : 157,170,703 - 157,187,717 (17,015)
query : 1 - 6,584 (6,584/6,584)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 18, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200724)
HIX0200724
HIT000389041
(
BC126449
)
(U7 snRNA-associated Sm-like protein LSm11;)
genome : 157,170,703 - 157,182,330 (11,628)
query : 1 - 1,197 (1,197/1,197)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 18, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200724)
HIX0200724
HIT000020447
(
AK095592
)
Representative transcript
(U7 snRNA-associated Sm-like protein LSm11;)
genome : 157,170,755 - 157,183,746 (12,992)
query : 3 - 2,563 (2,561/2,563)
4 exons
identity = 0.999
5'(0.998;1.000;0.988;0.999)3'
coverage = 0.999
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 18, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200724)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK082292
Danio
sp. (Zebrafish) : BC093279
Gallus
sp. (Chicken) : BX950474
Oryzias
sp. (Medaka) : ENSORLT00000009316
Tetraodon
sp. (Tetraodon) : GSTENT00031659001
Takifugu
sp. (Fugu) : SINFRUT00000127753
Rattus
sp. (Rat) : XM_001068848
Macaca
sp. (Macaque) : XM_001105388
Pan
sp. (Chimpanzee) : XM_001138531
Bos
sp. (Cow) : XM_001253651
Monodelphis
sp. (Opossum) : XM_001369709
Equus
sp. (Horse) : XM_001500886
Canis
sp. (Dog) : XM_536452
HIX0200724
HIT000214878 (
NM_173491
)
(U7 snRNA-associated Sm-like protein LSm11;)
genome : 157,170,755 - 157,183,746 (12,992)
query : 1 - 2,561 (2,561/2,561)
4 exons
identity = 0.999
5'(0.998;1.000;0.988;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 18, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200724)
HIX0200724
HIT000099327
(
BC051353
)
(U7 snRNA-associated Sm-like protein LSm11;)
genome : 157,170,780 - 157,184,174 (13,395)
query : 1 - 2,964 (2,964/2,982)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, mito 11, cyto_nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200724)
HIX0207235
HIT000617751 (
ENST00000518369
)
(Conserved hypothetical protein.)
genome : 157,174,512 - 157,174,715 (204)
query : 1 - 204 (204/204)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 7, mito 5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207235)
HIX0200724
HIT000043824
(
AK123951
)
(Conserved hypothetical protein.)
genome : 157,182,880 - 157,185,443 (2,564)
query : 1 - 2,564 (2,564/2,564)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 6, nucl 5.5, extr 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200724)
HIX0200724
HIT000011911
(
AK055297
)
(Conserved hypothetical protein.)
genome : 157,184,339 - 157,187,717 (3,379)
query : 1 - 3,379 (3,379/3,379)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 9, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200724)
HIX0200724
HIT000006433
(
AK023159
)
(Conserved hypothetical protein.)
genome : 157,184,857 - 157,187,717 (2,861)
query : 1 - 2,861 (2,861/2,861)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200724)
HIX0005365
HIT000204983 (
NM_014666
)
(Clathrin interactor 1; Clathrin-interacting protein localized in the trans-Golgi region; Clint; Enthoprotin; Epsin-4; Epsin-related protein; EpsinR;)
genome : 157,212,751 - 157,286,183 (73,433)
query : 1 - 3,986 (3,986/4,007)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17.5, cyto 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000656079 (
NM_001195555
)
(Clathrin interactor 1 isoform 1.)
genome : 157,212,751 - 157,286,183 (73,433)
query : 1 - 4,040 (4,040/4,061)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17.5, cyto 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000656080 (
NM_001195556
)
(Clathrin interactor 1 isoform 3.)
genome : 157,212,751 - 157,286,183 (73,433)
query : 1 - 4,017 (4,017/4,038)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 14.8333, cyto 4.5,
cyto_golg 4.16667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000088006
(
BC013091
)
(Clathrin interactor 1; Clathrin-interacting protein localized in the trans-Golgi region; Clint; Enthoprotin; Epsin-4; Epsin-related protein; EpsinR;)
genome : 157,212,751 - 157,230,685 (17,935)
query : 1 - 2,852 (2,852/2,873)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 16.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000622378 (
ENST00000523094
)
(Clathrin interactor 1 isoform 3.)
genome : 157,212,751 - 157,286,153 (73,403)
query : 1 - 3,987 (3,987/3,987)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 14.8333, cyto 4.5,
cyto_golg 4.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000092107
(
BC030264
)
(Clathrin interactor 1; Clathrin-interacting protein localized in the trans-Golgi region; Clint; Enthoprotin; Epsin-4; Epsin-related protein; EpsinR;)
genome : 157,213,302 - 157,223,153 (9,852)
query : 1 - 3,391 (3,391/3,517)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000028460
(
AL833548
)
(Clathrin interactor 1 isoform 3.)
genome : 157,213,296 - 157,217,569 (4,274)
query : 1 - 2,904 (2,904/2,922)
2 exons
identity = 0.999
3'(0.999;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15, cyto 9, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000629885 (
ENST00000530742
)
(Clathrin interactor 1 isoform 3.)
genome : 157,213,295 - 157,286,141 (72,847)
query : 1 - 3,344 (3,344/3,344)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 14.8333, cyto 4.5,
cyto_golg 4.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000623569 (
ENST00000524306
)
(Clathrin interactor 1 isoform 3.)
genome : 157,213,295 - 157,217,569 (4,275)
query : 1 - 2,905 (2,905/2,905)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15, cyto 9, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000509743 (
ENST00000411809
)
(Clathrin interactor 1; Clathrin-interacting protein localized in the trans-Golgi region; Clint; Enthoprotin; Epsin-4; Epsin-related protein; EpsinR;)
genome : 157,213,297 - 157,286,183 (72,887)
query : 1 - 3,440 (3,440/3,440)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000114666 (
ENST00000296951
)
(Clathrin interactor 1 isoform 1.)
genome : 157,213,297 - 157,286,168 (72,872)
query : 1 - 3,479 (3,479/3,479)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000042308
(
D79993
)
Representative transcript
(Clathrin interactor 1; Clathrin-interacting protein localized in the trans-Golgi region; Clint; Enthoprotin; Epsin-4; Epsin-related protein; EpsinR;)
genome : 157,213,297 - 157,286,079 (72,783)
query : 1 - 3,336 (3,336/3,336)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008942 : ENTH/VHS
IPR013809 : ENTH domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719531
Mus
sp. (Mouse) : AK143544
Rattus
sp. (Rat) : BC076397
Danio
sp. (Zebrafish) : BC085520
Bos
sp. (Cow) : BC153233
Pongo
sp. (Orangutan) : CR858116
Macaca
sp. (Macaque) : ENSMMUT00000003221
Oryzias
sp. (Medaka) : ENSORLT00000003054
Tetraodon
sp. (Tetraodon) : GSTENT00029965001
Tetraodon
sp. (Tetraodon) : GSTENT00031657001
Takifugu
sp. (Fugu) : SINFRUT00000169111
Pan
sp. (Chimpanzee) : XM_001138881
Monodelphis
sp. (Opossum) : XM_001379716
Danio
sp. (Zebrafish) : XM_001922429
Canis
sp. (Dog) : XM_536451
Equus
sp. (Horse) : XR_036359
HIX0005365
HIT000618225 (
ENST00000518855
)
(Clathrin interactor 1; Clathrin-interacting protein localized in the trans-Golgi region; Clint; Enthoprotin; Epsin-4; Epsin-related protein; EpsinR;)
genome : 157,213,299 - 157,223,153 (9,855)
query : 1 - 3,394 (3,394/3,394)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 4, cyto_nucl 3.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000048467
(
AK128594
)
(Clathrin interactor 1 isoform 3.)
genome : 157,213,303 - 157,277,289 (63,987)
query : 1 - 3,716 (3,716/3,716)
2 exons
identity = 0.996
3'(0.998;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 14, cyto 11, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000017632
(
AK092765
)
(Clathrin interactor 1 isoform 1.)
genome : 157,213,922 - 157,286,153 (72,232)
query : 1 - 2,816 (2,816/2,816)
12 exons
identity = 0.998
3'(0.998;0.995;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008942 : ENTH/VHS
IPR013809 : ENTH domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 14.8333, cyto 4.5,
cyto_golg 4.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000623175 (
ENST00000523908
)
(Clathrin interactor 1 isoform 1.)
genome : 157,214,413 - 157,286,151 (71,739)
query : 1 - 2,346 (2,346/2,346)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000621679 (
ENST00000522381
)
(Clathrin interactor 1; Clathrin-interacting protein localized in the trans-Golgi region; Clint; Enthoprotin; Epsin-4; Epsin-related protein; EpsinR;)
genome : 157,214,479 - 157,216,524 (2,046)
query : 20 - 721 (702/721)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.974
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 10, extr 7, cyto 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000031969
(
BC004467
)
(Clathrin interactor 1; Clathrin-interacting protein localized in the trans-Golgi region; Clint; Enthoprotin; Epsin-4; Epsin-related protein; EpsinR;)
genome : 157,214,533 - 157,286,044 (71,512)
query : 1 - 2,065 (2,065/2,087)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008942 : ENTH/VHS
IPR013809 : ENTH domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000494881
(
AK300257
)
(Clathrin interactor 1 isoform 1.)
genome : 157,214,528 - 157,286,151 (71,624)
query : 1 - 2,231 (2,231/2,231)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008942 : ENTH/VHS
IPR013809 : ENTH domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000620369 (
ENST00000521047
)
(Clathrin interactor 1; Clathrin-interacting protein localized in the trans-Golgi region; Clint; Enthoprotin; Epsin-4; Epsin-related protein; EpsinR;)
genome : 157,214,610 - 157,218,849 (4,240)
query : 1 - 733 (733/733)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14.5, cyto 8.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000079622
(
AF434813
)
(Clathrin interactor 1; Clathrin-interacting protein localized in the trans-Golgi region; Clint; Enthoprotin; Epsin-4; Epsin-related protein; EpsinR;)
genome : 157,214,654 - 157,285,978 (71,325)
query : 1 - 1,878 (1,878/1,878)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008942 : ENTH/VHS
IPR013809 : ENTH domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000629454 (
ENST00000530302
)
(Conserved hypothetical protein.)
genome : 157,218,628 - 157,233,020 (14,393)
query : 1 - 668 (668/668)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0005365
HIT000620930 (
ENST00000521615
)
(Clathrin interactor 1; Clathrin-interacting protein localized in the trans-Golgi region; Clint; Enthoprotin; Epsin-4; Epsin-related protein; EpsinR;)
genome : 157,218,766 - 157,232,964 (14,199)
query : 1 - 399 (399/399)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, cyto 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005365)
HIX0032295
HIT000243145
(
AF461900
)
Representative transcript
(Conserved hypothetical protein.)
genome : 157,258,213 - 157,260,646 (2,434)
query : 2 - 2,437 (2,436/2,455)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8, extr_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032295)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000040761
HIX0206389
HIT000565024 (
ENST00000460082
)
(Conserved hypothetical protein.)
genome : 157,358,266 - 157,358,571 (306)
query : 1 - 306 (306/306)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 10, extr 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206389)
HIX0164440
HIT000437201_08
(
DQ570670
)
Representative transcript
(Non-protein coding transcript.)
genome : 157,395,859 - 157,395,888 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164440)
HIX0207238
HIT000617899 (
ENST00000518523
)
(Conserved hypothetical protein.)
genome : 157,411,666 - 157,416,998 (5,333)
query : 1 - 1,670 (1,670/1,670)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 10.5, cyto_nucl 8.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207238)
HIX0207254
HIT000618590 (
ENST00000519230
)
(Cdc37, Hsp90 binding domain containing protein.)
genome : 157,413,154 - 157,414,714 (1,561)
query : 1 - 1,561 (1,561/1,561)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 15.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207254)
HIX0207251
HIT000618509 (
ENST00000519146
)
(Conserved hypothetical protein.)
genome : 157,505,107 - 157,505,772 (666)
query : 1 - 666 (666/666)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, cyto 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207251)
HIX0216677
HIT000260891
(
BC063431
)
(Hepatitis A virus cellular receptor 2; HAVcr-2; T-cell immunoglobulin and mucin domain-containing protein 3; TIMD-3; T-cell membrane protein 3; TIM-3; Precursor;)
genome : 156,512,843 - 156,536,138 (23,296)
query : 1 - 2,320 (2,320/2,358)
7 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.988;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, E.R. 9, cysk_plas 9, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216677)
HIX0216677
HIT000210877 (
NM_032782
)
(Hepatitis A virus cellular receptor 2; HAVcr-2; T-cell immunoglobulin and mucin domain-containing protein 3; TIMD-3; T-cell membrane protein 3; TIM-3; Precursor;)
genome : 156,512,843 - 156,536,248 (23,406)
query : 1 - 2,430 (2,430/2,448)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, E.R. 9, cysk_plas 9, cyto_plas 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216677)
HIX0216677
HIT000075080
(
AF251707
)
(Hepatitis A virus cellular receptor 2; HAVcr-2; T-cell immunoglobulin and mucin domain-containing protein 3; TIMD-3; T-cell membrane protein 3; TIM-3; Precursor;)
genome : 156,512,843 - 156,536,119 (23,277)
query : 2 - 2,302 (2,301/2,320)
7 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;0.988;0.997;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, E.R. 10, extr 5, E.R._mito 5, E.R._golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216677)
HIX0216677
HIT000117774 (
ENST00000307851
)
(Hepatitis A virus cellular receptor 2; HAVcr-2; T-cell immunoglobulin and mucin domain-containing protein 3; TIMD-3; T-cell membrane protein 3; TIM-3; Precursor;)
genome : 156,512,843 - 156,536,725 (23,883)
query : 1 - 2,907 (2,907/2,907)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, E.R. 9, cysk_plas 9, cyto_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216677)
HIX0216677
HIT000010606
(
AK027334
)
(Hepatitis A virus cellular receptor 2; HAVcr-2; T-cell immunoglobulin and mucin domain-containing protein 3; TIMD-3; T-cell membrane protein 3; TIM-3; Precursor;)
genome : 156,512,843 - 156,536,037 (23,195)
query : 1 - 1,772 (1,772/1,772)
8 exons
identity = 0.996
3'(0.997;0.992;1.000;1.000;1.000;0.988;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, E.R. 9, cysk_plas 9, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216677)
HIX0216677
HIT000079817
(
AF450242
)
(Hepatitis A virus cellular receptor 2; HAVcr-2; T-cell immunoglobulin and mucin domain-containing protein 3; TIMD-3; T-cell membrane protein 3; TIM-3; Precursor;)
genome : 156,513,960 - 156,536,051 (22,092)
query : 1 - 1,116 (1,116/1,116)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.988;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, E.R. 9, cysk_plas 9, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216677)
HIX0216677
HIT000079818
(
AF450243
)
Representative transcript
(Hepatitis A virus cellular receptor 2; HAVcr-2; T-cell immunoglobulin and mucin domain-containing protein 3; TIMD-3; T-cell membrane protein 3; TIM-3; Precursor;)
genome : 156,513,960 - 156,536,051 (22,092)
query : 1 - 1,116 (1,116/1,116)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, E.R. 9, cysk_plas 9, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216677)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AJ549521
Mus
sp. (Mouse) : AK170775
Bos
sp. (Cow) : BC114846
Pongo
sp. (Orangutan) : CR859844
Equus
sp. (Horse) : ENSECAT00000016095
Pan
sp. (Chimpanzee) : ENSPTRT00000032283
Macaca
sp. (Macaque) : XM_001104859
Monodelphis
sp. (Opossum) : XM_001379553
Canis
sp. (Dog) : XM_536456
HIX0216677
HIT000621886 (
ENST00000522593
)
(Hepatitis A virus cellular receptor 2; HAVcr-2; T-cell immunoglobulin and mucin domain-containing protein 3; TIMD-3; T-cell membrane protein 3; TIM-3; Precursor;)
genome : 156,514,099 - 156,536,133 (22,035)
query : 1 - 975 (975/975)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, E.R. 6, extr 3, E.R._mito 3, E.R._golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216677)
HIX0216677
HIT000433272
(
AK314406
)
(Hepatitis A virus cellular receptor 2; HAVcr-2; T-cell immunoglobulin and mucin domain-containing protein 3; TIMD-3; T-cell membrane protein 3; TIM-3; Precursor;)
genome : 156,514,113 - 156,536,055 (21,943)
query : 1 - 967 (967/967)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.988;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, E.R. 9, cysk_plas 9, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216677)
HIX0216677
HIT000084154
(
AY069944
)
(Hepatitis A virus cellular receptor 2; HAVcr-2; T-cell immunoglobulin and mucin domain-containing protein 3; TIMD-3; T-cell membrane protein 3; TIM-3; Precursor;)
genome : 156,514,113 - 156,535,994 (21,882)
query : 1 - 906 (906/906)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.988;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, E.R. 9, cysk_plas 9, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216677)
HIX0216677
HIT000721875
(
JX049979
)
(Hepatitis A virus cellular receptor 2; HAVcr-2; T-cell immunoglobulin and mucin domain-containing protein 3; TIMD-3; T-cell membrane protein 3; TIM-3; Precursor;)
genome : 156,514,113 - 156,535,994 (21,882)
query : 1 - 906 (906/906)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.988;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, E.R. 9, cysk_plas 9, cyto_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216677)
HIX0216677
HIT000623483 (
ENST00000524219
)
(Hepatitis A virus cellular receptor 2; HAVcr-2; T-cell immunoglobulin and mucin domain-containing protein 3; TIMD-3; T-cell membrane protein 3; TIM-3; Precursor;)
genome : 156,522,419 - 156,569,880 (47,462)
query : 1 - 566 (566/566)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216677)
HIX0216677
HIT000620979 (
ENST00000521665
)
(Hepatitis A virus cellular receptor 2 homolog; HAVcr-2; T-cell immunoglobulin and mucin domain-containing protein 3; TIMD-3; T-cell membrane protein 3; TIM-3; Fragment;)
genome : 156,525,869 - 156,534,294 (8,426)
query : 1 - 785 (785/795)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 15.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216677)
HIX0216668
HIT000623236 (
ENST00000523969
)
(Cytoplasmic FMR1-interacting protein 1 isoform b.)
genome : 156,693,089 - 156,820,241 (127,153)
query : 1 - 4,209 (4,209/4,209)
32 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.980;0.948;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 12.8333, cyto_pero 12.8333,
E.R. 3.5, nucl 2.5, pero 2.5, E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000121607 (
ENST00000318218
)
(Cytoplasmic FMR1-interacting protein 2; p53-inducible protein 121;)
genome : 156,693,091 - 156,822,606 (129,516)
query : 1 - 6,573 (6,573/6,573)
32 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.990;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.980;0.948;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_mito 9.83333,
nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000366310 (
NM_001037333
)
(Cytoplasmic FMR1-interacting protein 2; p53-inducible protein 121;)
genome : 156,693,091 - 156,822,606 (129,516)
query : 1 - 6,498 (6,498/6,498)
31 exons
identity = 0.999
5'(1.000;1.000;1.000;0.987;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;0.948;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_mito 9.83333,
nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000025145
(
AL136549
)
(Cytoplasmic FMR1-interacting protein 2; p53-inducible protein 121;)
genome : 156,693,091 - 156,820,216 (127,126)
query : 1 - 4,108 (4,108/4,126)
31 exons
identity = 0.998
5'(1.000;1.000;1.000;0.987;1.000;1.000;1.000;
1.000;1.000;0.989;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.970;0.948;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008081 : Cytoplasmic FMR1-interacting
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_mito 9.83333,
nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000620087 (
ENST00000520759
)
(Cytoplasmic FMR1-interacting protein 1 isoform b.)
genome : 156,693,091 - 156,820,216 (127,126)
query : 1 - 4,107 (4,107/4,123)
31 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;0.948;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, E.R. 3.5, E.R._mito 3, pero 2, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000540217 (
ENST00000442283
)
(Cytoplasmic FMR1-interacting protein 1 isoform b.)
genome : 156,693,091 - 156,820,215 (127,125)
query : 1 - 4,102 (4,102/4,102)
31 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;0.948;1.000;1.000;
1.000;0.977;0.986;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, E.R. 3.5, E.R._mito 3, pero 2, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000490489
(
AK295865
)
(Cytoplasmic FMR1-interacting protein 2.)
genome : 156,693,133 - 156,820,231 (127,099)
query : 1 - 3,673 (3,673/3,675)
28 exons
identity = 0.998
5'(1.000;1.000;1.000;0.987;1.000;1.000;0.989;
1.000;1.000;0.992;1.000;1.000;1.000;1.000;
0.980;0.948;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR008081 : Cytoplasmic FMR1-interacting
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_mito 9.83333,
nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000622403 (
ENST00000523119
)
(Cytoplasmic FMR1-interacting protein 1 isoform b.)
genome : 156,693,133 - 156,820,216 (127,084)
query : 1 - 3,657 (3,657/3,672)
28 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.980;0.948;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000488844
(
AK294220
)
(Cytoplasmic FMR1-interacting protein 2.)
genome : 156,693,133 - 156,820,215 (127,083)
query : 1 - 3,477 (3,477/3,477)
26 exons
identity = 0.997
5'(1.000;0.993;1.000;1.000;0.989;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.980;0.948;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.989;0.996;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008081 : Cytoplasmic FMR1-interacting
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.8333, cyto_mito 10.3333,
nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000492025
(
AK297401
)
(Cytoplasmic FMR1-interacting protein 2.)
genome : 156,693,133 - 156,820,215 (127,083)
query : 1 - 3,840 (3,840/3,840)
29 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;0.993;1.000;
1.000;0.970;0.948;1.000;1.000;0.995;0.989;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR008081 : Cytoplasmic FMR1-interacting
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.3333, cyto_mito 9.83333,
nucl 7.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000621759 (
ENST00000522463
)
(Cytoplasmic FMR1-interacting protein 2.)
genome : 156,693,133 - 156,820,215 (127,083)
query : 1 - 3,477 (3,477/3,477)
26 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.980;0.948;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.3333, cyto_mito 9.83333,
nucl 7.5, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000498326
(
AK303702
)
(Cytoplasmic FMR1-interacting protein 2.)
genome : 156,693,138 - 156,820,215 (127,078)
query : 2 - 3,983 (3,982/3,983)
30 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.989;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;0.980;0.948;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008081 : Cytoplasmic FMR1-interacting
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.3333, cyto_mito 9.83333,
nucl 7.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000620737 (
ENST00000521420
)
(Cytoplasmic FMR1-interacting protein 2.)
genome : 156,693,138 - 156,822,603 (129,466)
query : 1 - 6,370 (6,370/6,370)
30 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.980;0.948;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.3333, cyto_mito 9.33333,
nucl 8.5, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000000884
(
AB032994
)
(Cytoplasmic FMR1-interacting protein 2; p53-inducible protein 121;)
genome : 156,693,150 - 156,820,241 (127,092)
query : 1 - 4,149 (4,149/4,149)
32 exons
identity = 0.998
5'(1.000;1.000;1.000;0.987;1.000;1.000;1.000;
1.000;1.000;0.989;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.980;0.948;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_mito 9.83333,
nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000072061
(
AF160973
)
(Cytoplasmic FMR1-interacting protein 2; p53-inducible protein 121;)
genome : 156,693,181 - 156,820,216 (127,036)
query : 1 - 4,018 (4,018/4,035)
31 exons
identity = 0.998
5'(1.000;1.000;1.000;0.987;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;0.948;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008081 : Cytoplasmic FMR1-interacting
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_mito 9.83333,
nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000307446 (
ENST00000347377
)
(Cytoplasmic FMR1-interacting protein 2; p53-inducible protein 121;)
genome : 156,693,187 - 156,822,606 (129,420)
query : 1 - 6,791 (6,791/6,791)
31 exons
identity = 0.999
5'(1.000;1.000;1.000;0.987;0.990;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;0.948;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.3333, cyto_mito 9.33333,
nucl 8.5, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000366309 (
NM_001037332
)
(Cytoplasmic FMR1-interacting protein 2; p53-inducible protein 121;)
genome : 156,693,187 - 156,822,606 (129,420)
query : 1 - 6,791 (6,791/6,791)
31 exons
identity = 0.999
5'(1.000;1.000;1.000;0.987;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;0.948;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_mito 9.83333,
nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000090332
(
BC021008
)
(Cytoplasmic FMR1-interacting protein 2; p53-inducible protein 121;)
genome : 156,696,352 - 156,820,216 (123,865)
query : 1 - 4,235 (4,235/4,308)
31 exons
identity = 0.998
5'(1.000;1.000;1.000;0.987;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;0.948;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008081 : Cytoplasmic FMR1-interacting
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_mito 9.83333,
nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000618516 (
ENST00000519153
)
(Cytoplasmic FMR1-interacting protein 1 isoform b.)
genome : 156,696,352 - 156,820,216 (123,865)
query : 1 - 4,234 (4,234/4,255)
31 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;0.948;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, E.R. 3.5, E.R._mito 3, pero 2, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000035434
(
BC011762
)
(Cytoplasmic FMR1-interacting protein 2; p53-inducible protein 121;)
genome : 156,696,352 - 156,820,216 (123,865)
query : 1 - 4,235 (4,235/4,250)
31 exons
identity = 0.998
5'(1.000;1.000;1.000;0.987;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;0.948;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008081 : Cytoplasmic FMR1-interacting
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_mito 9.83333,
nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000204756 (
NM_014376
)
(Cytoplasmic FMR1-interacting protein 2; p53-inducible protein 121;)
genome : 156,696,362 - 156,822,606 (126,245)
query : 1 - 6,615 (6,615/6,615)
31 exons
identity = 0.999
5'(1.000;1.000;1.000;0.987;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;0.948;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_mito 9.83333,
nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000358856 (
ENST00000377576
)
(Cytoplasmic FMR1-interacting protein 2; p53-inducible protein 121;)
genome : 156,696,362 - 156,822,606 (126,245)
query : 1 - 6,615 (6,615/6,615)
31 exons
identity = 0.999
5'(1.000;1.000;1.000;0.987;0.990;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;0.948;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.3333, cyto_mito 9.33333,
nucl 8.5, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000617146 (
ENST00000517753
)
(Cytoplasmic FMR1-interacting protein 1 isoform b.)
genome : 156,712,346 - 156,820,216 (107,871)
query : 1 - 3,995 (3,995/4,011)
30 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.980;0.948;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, E.R. 3.5, E.R._mito 3, pero 2, mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0216668
HIT000331384
(
AK223604
)
Representative transcript
(Cytoplasmic FMR1-interacting protein 2; p53-inducible protein 121;)
genome : 156,712,355 - 156,820,095 (107,741)
query : 1 - 3,941 (3,941/3,941)
31 exons
identity = 0.998
5'(1.000;1.000;0.987;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;0.948;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008081 : Cytoplasmic FMR1-interacting
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_mito 9.83333,
nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK147224
Pongo
sp. (Orangutan) : CR860395
Danio
sp. (Zebrafish) : EF531617
Oryzias
sp. (Medaka) : ENSORLT00000009831
Tetraodon
sp. (Tetraodon) : GSTENT00004812001
Rattus
sp. (Rat) : S74327
Takifugu
sp. (Fugu) : SINFRUT00000152773
Macaca
sp. (Macaque) : XM_001105005
Pan
sp. (Chimpanzee) : XM_001137120
Monodelphis
sp. (Opossum) : XM_001379629
Equus
sp. (Horse) : XM_001500928
Gallus
sp. (Chicken) : XM_414567
Canis
sp. (Dog) : XM_536455
Bos
sp. (Cow) : XM_597034
HIX0216668
HIT000640176 (
ENST00000541131
)
(Cytoplasmic FMR1-interacting protein 2.)
genome : 156,712,372 - 156,822,606 (110,235)
query : 1 - 6,135 (6,135/6,135)
28 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.980;0.948;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.3333, cyto_mito 9.83333,
nucl 7.5, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216668)
HIX0005355
pHIT000010111 ( pHIT000010111 )
(Conserved hypothetical protein.)
genome : 156,692,866 - 156,770,589 (77,724)
query : 1 - 3,444 (3,444/3,444)
25 exons
InterPro :
IPR008081 : Cytoplasmic FMR1-interacting
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005355)
CAGE tag :
H04BA02D0705,H04BA07O0507,H04BA17E1709
H04BA28D2109,H04BA83C0307
HIX0184135
pHIT000103850 ( pHIT000103850 )
Representative transcript
(Conserved hypothetical protein.)
genome : 157,095,180 - 157,098,847 (3,668)
query : 1 - 324 (324/324)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0184135)
CAGE tag :
T05R095C1E07
HIX0183555
pHIT000010119 ( pHIT000010119 )
Representative transcript
(Conserved hypothetical protein.)
genome : 157,098,623 - 157,107,007 (8,385)
query : 1 - 516 (516/516)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0183555)
CAGE tag :
H09BA18F0101,H39BA32G0505,H39BA99G1913
H40BA31N1503,H40BB82K0501
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK162162
Bos
sp. (Cow) : BC149549
Canis
sp. (Dog) : ENSCAFT00000035164
Equus
sp. (Horse) : ENSECAT00000021163
Macaca
sp. (Macaque) : ENSMMUT00000003169
Pongo
sp. (Orangutan) : ENSPPYT00000018614
Pan
sp. (Chimpanzee) : ENSPTRT00000032306
Rattus
sp. (Rat) : XM_001065286
Monodelphis
sp. (Opossum) : XM_001380452
AC011345.5
156000001-156024210 F -
NCBI
AC008535.5
156024211-156069682 F +
NCBI
AC016577.4
156069683-156141326 F +
NCBI
AC025434.6
156141327-156230618 F -
NCBI
AC011414.4
156230619-156293851 F +
NCBI
AC008491.6
156293852-156380953 F +
NCBI
AC026777.4
156380954-156509277 F +
NCBI
AC011377.6
156509278-156548744 F -
NCBI
AC010609.7
156548745-156687726 F +
NCBI
AC009185.6
156687727-156740357 F +
NCBI
AC016571.7
156740358-156800659 F +
NCBI
AC008676.6
156800660-156981355 F -
NCBI
AC106801.2
156981356-156996190 F -
NCBI
AC008694.6
156996191-157118746 F +
NCBI
AC106759.3
157118747-157127929 F +
NCBI
AC026407.4
157127930-157274725 F -
NCBI
AC011394.5
157274726-157315974 F +
NCBI
AC022411.6
157315975-157356095 F +
NCBI
AC008677.5
157356096-157511560 F -
NCBI
AC091880.3
157511561-157575321 F -
NCBI
AC025437.6
157575322-157600000 F -
NCBI