bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0024961
HIT000422315
(
AK289518
)
Representative transcript
(Protein FAM153A; Renal carcinoma antigen NY-REN-7;)
genome : 175,487,692 - 175,542,870 (55,179)
query : 1 - 1,641 (1,641/1,641)
23 exons
identity = 0.993
5'(0.995;1.000;1.000;1.000;0.960;1.000;1.000;
1.000;0.920;1.000;0.968;1.000;1.000;1.000;
0.968;0.986;1.000;1.000;1.000;1.000;0.989)3'
coverage = 1.000
InterPro :
IPR023249 : FAM153
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000032446
HIX0024961
HIT000609967 (
ENST00000510151
)
(Protein FAM153A; Renal carcinoma antigen NY-REN-7;)
genome : 175,487,692 - 175,542,870 (55,179)
query : 1 - 1,641 (1,641/1,641)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000604739_01 (
ENST00000504530
)
(Protein FAM153A.)
genome : 175,487,692 - 175,520,277 (32,586)
query : 1 - 529 (529/539)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.981
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000389610
(
BC128074
)
(Hypothetical short protein.)
genome : 175,487,726 - 175,502,222 (14,497)
query : 1 - 721 (721/727)
3 exons
identity = 0.999
5'(0.998)3'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000614196 (
ENST00000514721
)
(Hypothetical short protein.)
genome : 175,487,726 - 175,502,222 (14,497)
query : 1 - 721 (721/721)
3 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000611383 (
ENST00000511680
)
(Conserved hypothetical protein.)
genome : 175,488,125 - 175,517,442 (29,318)
query : 1 - 557 (557/557)
6 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000476965 (
ENST00000393518
)
(Protein FAM153B.)
genome : 175,488,258 - 175,543,018 (54,761)
query : 1 - 1,071 (1,071/1,071)
12 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000612482 (
ENST00000512862
)
(Protein FAM153B.)
genome : 175,488,258 - 175,543,018 (54,761)
query : 1 - 1,071 (1,071/1,071)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000615223 (
ENST00000515817
)
(Protein FAM153A; Renal carcinoma antigen NY-REN-7;)
genome : 175,490,540 - 175,541,801 (51,262)
query : 1 - 1,966 (1,966/1,966)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000724482 (
NM_001265615
)
(Protein FAM153A; Renal carcinoma antigen NY-REN-7;)
genome : 175,490,712 - 175,541,801 (51,090)
query : 1 - 1,794 (1,794/1,794)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000607405_01 (
ENST00000507409
)
(Hypothetical short protein.)
genome : 175,490,712 - 175,517,799 (27,088)
query : 1 - 542 (542/542)
3 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, extr 12, cyto_nucl 10, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000040589
(
BC028606
)
(Protein FAM153B.)
genome : 175,511,849 - 175,536,577 (24,729)
query : 6 - 1,523 (1,518/1,538)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)3'
coverage = 0.997
InterPro :
IPR023249 : FAM153
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto 8.5, cyto_nucl 8, mito 7, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000476969 (
ENST00000393522
)
(Protein FAM153B.)
genome : 175,511,849 - 175,536,577 (24,729)
query : 1 - 1,518 (1,518/1,533)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto 8.5, cyto_nucl 8, mito 7, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000603994 (
ENST00000503724
)
(Protein FAM153B.)
genome : 175,511,859 - 175,528,584 (16,726)
query : 1 - 602 (602/602)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 13, extr 5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000106509 (
ENST00000253490
)
(Protein FAM153A; Renal carcinoma antigen NY-REN-7;)
genome : 175,511,909 - 175,543,458 (31,550)
query : 1 - 2,096 (2,096/2,096)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 11, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000603814 (
ENST00000503533
)
(Protein FAM153B.)
genome : 175,511,909 - 175,524,968 (13,060)
query : 1 - 545 (545/545)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 10, cyto 6.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000613748 (
ENST00000514235
)
(Conserved hypothetical protein.)
genome : 175,511,909 - 175,517,712 (5,804)
query : 1 - 581 (581/581)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000613473 (
ENST00000513938
)
(Conserved hypothetical protein.)
genome : 175,511,909 - 175,517,613 (5,705)
query : 1 - 532 (532/532)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 4, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000608232 (
ENST00000508296
)
(Protein FAM153A; Renal carcinoma antigen NY-REN-7;)
genome : 175,516,460 - 175,553,958 (37,499)
query : 13 - 4,330 (4,318/4,330)
26 exons
identity = 1.000
5'(0.985;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000602827 (
ENST00000502475
)
(Protein FAM153A.)
genome : 175,540,155 - 175,542,781 (2,627)
query : 1 - 587 (587/587)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, extr 8, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0216622
HIT000686724_01 (
ENST00000574375
)
(Non-protein coding transcript.)
genome : 175,544,237 - 175,544,355 (119)
query : 1 - 119 (119/120)
1 exon
identity = 0.975
5'(0.975)3'
coverage = 0.992
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216622)
HIX0024961
HIT000607653 (
ENST00000507672
)
(Centrosomal protein of 192 kDa.)
genome : 175,546,548 - 175,548,151 (1,604)
query : 1 - 560 (560/560)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 14.5, mito_pero 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000660334 (
NR_038402
)
(Conserved hypothetical protein.)
genome : 175,546,552 - 175,552,168 (5,617)
query : 1 - 967 (967/1,005)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3, mito 3, cyto_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000024792
(
AL117630
)
(Conserved hypothetical protein.)
genome : 175,546,563 - 175,552,168 (5,606)
query : 10 - 965 (956/1,003)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3, mito 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000613331 (
ENST00000513787
)
(Conserved hypothetical protein.)
genome : 175,546,563 - 175,552,168 (5,606)
query : 1 - 956 (956/956)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3, mito 3, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000609595 (
ENST00000509747
)
(Centrosomal protein of 192 kDa.)
genome : 175,546,649 - 175,548,817 (2,169)
query : 1 - 258 (258/258)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 12, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000011620
(
AK055006
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 175,547,893 - 175,559,261 (11,369)
query : 1 - 2,629 (2,629/2,629)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000608288 (
ENST00000508356
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 175,547,893 - 175,559,261 (11,369)
query : 1 - 2,628 (2,628/2,628)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, plas 5, nucl 5, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0024961
HIT000612189 (
ENST00000512543
)
(Conserved hypothetical protein.)
genome : 175,550,837 - 175,552,141 (1,305)
query : 1 - 576 (576/576)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5, cyto 3.5, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024961)
HIX0164477
HIT000604824 (
ENST00000504629
)
(Hypothetical short protein.)
genome : 175,551,213 - 175,558,464 (7,252)
query : 1 - 354 (354/354)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164477)
HIX0164477
HIT000448059_04
(
DQ581528
)
Representative transcript
(Non-protein coding transcript.)
genome : 175,558,378 - 175,558,406 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164477)
HIX0206888
HIT000609857 (
ENST00000510029
)
(Conserved hypothetical protein.)
genome : 175,564,160 - 175,582,741 (18,582)
query : 1 - 920 (920/920)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206888)
HIX0032054
HIT000659588 (
NR_036494
)
(Centrosomal protein of 192 kDa.)
genome : 175,570,088 - 175,626,298 (56,211)
query : 1 - 4,292 (4,292/4,307)
26 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.956;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 11, extr 10, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032054)
HIX0032054
HIT000259229
(
BC052945
)
Representative transcript
(Centrosomal protein of 192 kDa.)
genome : 175,570,088 - 175,612,158 (42,071)
query : 5 - 3,636 (3,632/3,651)
23 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.956;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, nucl 7.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032054)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY325252
HIX0032054
HIT000614838 (
ENST00000515403
)
(Centrosomal protein of 192 kDa.)
genome : 175,570,088 - 175,612,158 (42,071)
query : 1 - 3,632 (3,632/3,632)
23 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.956;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, nucl 7.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032054)
HIX0032054
HIT000613455 (
ENST00000513919
)
(Centrosomal protein of 192 kDa.)
genome : 175,570,453 - 175,575,050 (4,598)
query : 1 - 735 (735/735)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032054)
HIX0032054
HIT000603604 (
ENST00000503307
)
(Centrosomal protein of 192 kDa.)
genome : 175,585,887 - 175,595,041 (9,155)
query : 1 - 689 (689/689)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14, extr 7, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032054)
HIX0032054
HIT000093422
(
BC034407
)
(Hypothetical protein.)
genome : 175,600,352 - 175,626,298 (25,947)
query : 1 - 1,608 (1,608/1,664)
13 exons
identity = 0.998
3'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 7, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032054)
HIX0032054
HIT000608010 (
ENST00000508056
)
(Conserved hypothetical protein.)
genome : 175,600,355 - 175,626,298 (25,944)
query : 1 - 1,605 (1,605/1,605)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032054)
HIX0032054
HIT000609971 (
ENST00000510155
)
(Hypothetical short protein.)
genome : 175,600,356 - 175,602,396 (2,041)
query : 1 - 544 (544/544)
3 exons
identity = 0.993
3'(1.000;0.956;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032054)
HIX0164466
HIT000445907_04
(
DQ579376
)
Representative transcript
(Non-protein coding transcript.)
genome : 175,601,380 - 175,601,409 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164466)
HIX0164449
HIT000441988_04
(
DQ575457
)
Representative transcript
(Non-protein coding transcript.)
genome : 175,601,552 - 175,601,581 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164449)
HIX0164494
HIT000454345_04
(
DQ587814
)
Representative transcript
(Non-protein coding transcript.)
genome : 175,603,114 - 175,603,143 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164494)
HIX0032054
HIT000611930 (
ENST00000512260
)
(Hypothetical protein.)
genome : 175,603,523 - 175,612,183 (8,661)
query : 1 - 534 (534/534)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 10, extr 6, mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032054)
HIX0032054
HIT000610603 (
ENST00000510850
)
(Hypothetical short protein.)
genome : 175,607,010 - 175,612,159 (5,150)
query : 1 - 548 (548/548)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 14, cyto 3.5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032054)
HIX0121229
HIT000444695
(
DQ578164
)
Representative transcript
(Non-protein coding transcript.)
genome : 175,609,395 - 175,609,425 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0121229)
HIX0164495
HIT000454345_05
(
DQ587814
)
Representative transcript
(Non-protein coding transcript.)
genome : 175,609,571 - 175,609,600 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164495)
HIX0164534
HIT000468193_03
(
DQ601662
)
Representative transcript
(Non-protein coding transcript.)
genome : 175,609,670 - 175,609,699 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164534)
HIX0032054
HIT000460705
(
DQ594174
)
(Non-protein coding transcript.)
genome : 175,609,723 - 175,609,753 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032054)
HIX0164293
HIT000467502_03
(
DQ600971
)
(Non-protein coding transcript.)
genome : 175,609,744 - 175,609,773 (30)
query : 1 - 30 (30/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.938
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164293)
HIX0164293
HIT000467504_03
(
DQ600973
)
Representative transcript
(Non-protein coding transcript.)
genome : 175,609,744 - 175,609,775 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164293)
HIX0164293
HIT000467505_03
(
DQ600974
)
(Non-protein coding transcript.)
genome : 175,609,744 - 175,609,774 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164293)
HIX0164293
HIT000467501_03
(
DQ600970
)
(Non-protein coding transcript.)
genome : 175,609,744 - 175,609,773 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164293)
HIX0164293
HIT000467503_03
(
DQ600972
)
(Non-protein coding transcript.)
genome : 175,609,744 - 175,609,774 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164293)
HIX0164293
HIT000467498_03
(
DQ600967
)
(Non-protein coding transcript.)
genome : 175,609,744 - 175,609,771 (28)
query : 1 - 28 (28/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164293)
HIX0164293
HIT000467500_03
(
DQ600969
)
(Non-protein coding transcript.)
genome : 175,609,744 - 175,609,773 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164293)
HIX0164293
HIT000467506_03
(
DQ600975
)
(Non-protein coding transcript.)
genome : 175,609,744 - 175,609,772 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164293)
HIX0164293
HIT000437358_03
(
DQ570827
)
(Non-protein coding transcript.)
genome : 175,609,745 - 175,609,774 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164293)
HIX0164293
HIT000463170_03
(
DQ596639
)
(Non-protein coding transcript.)
genome : 175,609,746 - 175,609,775 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164293)
HIX0164293
HIT000464860_03
(
DQ598329
)
(Non-protein coding transcript.)
genome : 175,609,746 - 175,609,775 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164293)
HIX0164293
HIT000437186_03
(
DQ570655
)
(Non-protein coding transcript.)
genome : 175,609,749 - 175,609,777 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164293)
HIX0164293
HIT000464088_03
(
DQ597557
)
(Non-protein coding transcript.)
genome : 175,609,748 - 175,609,777 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164293)
HIX0164510
HIT000459711_03
(
DQ593180
)
Representative transcript
(Non-protein coding transcript.)
genome : 175,609,813 - 175,609,842 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164510)
HIX0164294
HIT000443868_03
(
DQ577337
)
(Non-protein coding transcript.)
genome : 175,610,045 - 175,610,075 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164294)
HIX0164294
HIT000438784_03
(
DQ572253
)
Representative transcript
(Non-protein coding transcript.)
genome : 175,610,047 - 175,610,077 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164294)
HIX0164294
HIT000454042_03
(
DQ587511
)
(Non-protein coding transcript.)
genome : 175,610,077 - 175,610,105 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164294)
HIX0164462
HIT000444648_03
(
DQ578117
)
Representative transcript
(Non-protein coding transcript.)
genome : 175,610,131 - 175,610,161 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164462)
HIX0164301
HIT000462735_03
(
DQ596204
)
(Non-protein coding transcript.)
genome : 175,610,213 - 175,610,242 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164301)
HIX0164301
HIT000466788_03
(
DQ600257
)
Representative transcript
(Non-protein coding transcript.)
genome : 175,610,231 - 175,610,261 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164301)
HIX0032441
HIT000096133
(
BC040332
)
Representative transcript
(Conserved hypothetical protein.)
genome : 175,610,680 - 175,614,280 (3,601)
query : 1 - 3,607 (3,607/3,638)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 10.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032441)
HIX0164478
HIT000448059_05
(
DQ581528
)
Representative transcript
(Non-protein coding transcript.)
genome : 175,631,844 - 175,631,872 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164478)
HIX0207109
HIT000598786 (
ENST00000495423
)
(Conserved hypothetical protein.)
genome : 175,665,385 - 175,723,677 (58,293)
query : 1 - 913 (913/913)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13.5, cyto 7.5, extr 3, plas 1,
mito 1, E.R. 1, pero 1, cysk 1, E.R._mito 1, mito_pero 1,
cysk_plas 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207109)
HIX0207109
HIT000493960
(
AK299336
)
Representative transcript
(SUMO-interacting motif-containing protein 1.)
genome : 175,665,403 - 175,731,480 (66,078)
query : 1 - 2,005 (2,005/2,005)
5 exons
identity = 1.000
5'(0.996;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207109)
HIX0207109
HIT000527536 (
ENST00000429602
)
(Conserved hypothetical protein.)
genome : 175,665,403 - 175,731,480 (66,078)
query : 1 - 2,004 (2,004/2,004)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17.5, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207109)
HIX0207109
HIT000608680 (
ENST00000508769
)
(Conserved hypothetical protein.)
genome : 175,665,456 - 175,716,802 (51,347)
query : 1 - 461 (461/461)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207109)
HIX0207109
HIT000572083 (
ENST00000467472
)
(Conserved hypothetical protein.)
genome : 175,665,510 - 175,723,325 (57,816)
query : 1 - 364 (364/364)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 12.5, cyto 8, plas 2, mito 2,
cysk 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207109)
HIX0207109
HIT000613645 (
ENST00000514128
)
(Conserved hypothetical protein.)
genome : 175,665,659 - 175,716,957 (51,299)
query : 1 - 697 (697/697)
2 exons
identity = 0.990
5'(0.992;0.987)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.1667, nucl 12.5, mito 9, cyto 8.5,
cyto_pero 6.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207109)
HIX0207109
HIT000603871 (
ENST00000503595
)
(Conserved hypothetical protein.)
genome : 175,697,233 - 175,717,212 (19,980)
query : 1 - 847 (847/847)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15.5, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207109)
HIX0207109
HIT000046077
(
AK126204
)
(SUMO-interacting motif-containing protein 1;)
genome : 175,715,842 - 175,723,503 (7,662)
query : 1 - 3,443 (3,443/3,443)
2 exons
identity = 0.997
5'(0.999;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207109)
HIX0206163
HIT000209187_02 (
NM_024332
)
(JAB1/MPN/MOV34 metalloenzyme domain containing protein.)
genome : 175,735,058 - 175,737,877 (2,820)
query : 101 - 2,926 (2,826/2,952)
1 exon
identity = 0.965
5'(0.965)3'
coverage = 0.965
EC number :
EC 3.1.2.15
,
EC 3.4.19.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cysk 11, nucl 2, mito 2, lyso 2, golg 2,
mito_nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206163)
HIX0206163
HIT000365586_02 (
NM_001018055
)
(JAB1/MPN/MOV34 metalloenzyme domain containing protein.)
genome : 175,735,058 - 175,737,877 (2,820)
query : 101 - 2,851 (2,751/2,877)
2 exons
identity = 0.964
5'(0.964;0.965)3'
coverage = 0.964
EC number :
EC 3.1.2.15
,
EC 3.4.19.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cysk 11, mito 3, nucl 2, lyso 2, golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206163)
HIX0206163
HIT000126442_02 (
ENST00000330045
)
(JAB1/MPN/MOV34 metalloenzyme domain containing protein.)
genome : 175,735,058 - 175,737,535 (2,478)
query : 90 - 2,496 (2,407/2,496)
2 exons
identity = 0.963
5'(0.964;0.963)3'
coverage = 0.964
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cysk 11, mito 3, nucl 2, lyso 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206163)
HIX0206163
HIT000608482_01 (
ENST00000508559
)
(JAB1/MPN/MOV34 metalloenzyme domain containing protein.)
genome : 175,735,066 - 175,736,016 (951)
query : 1 - 951 (951/951)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, cyto_nucl 8, nucl 7, cyto 7, extr 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206163)
HIX0216299
HIT000127980 (
ENST00000332772
)
(Conserved hypothetical protein.)
genome : 175,740,083 - 175,772,992 (32,910)
query : 1 - 1,891 (1,891/1,891)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216299)
HIX0216299
HIT000265104
(
BC073880
)
Representative transcript
(Conserved hypothetical protein.)
genome : 175,740,148 - 175,772,989 (32,842)
query : 1 - 1,823 (1,823/1,853)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216299)
HIX0216299
HIT000051055
(
BC032390
)
(Conserved hypothetical protein.)
genome : 175,740,180 - 175,772,989 (32,810)
query : 1 - 1,791 (1,791/1,818)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216299)
HIX0005437
HIT000037836
(
BC017097
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,773,067 - 175,788,767 (15,701)
query : 1 - 2,784 (2,784/2,822)
9 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
InterPro :
IPR026759 : Putative monooxygenase p33MONOX
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 10.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000057506
(
BX648859
)
Representative transcript
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,773,067 - 175,788,809 (15,743)
query : 1 - 2,826 (2,826/2,852)
9 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
InterPro :
IPR026759 : Putative monooxygenase p33MONOX
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 10.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ851782
Mus
sp. (Mouse) : AK145025
Rattus
sp. (Rat) : BC085893
Bos
sp. (Cow) : BC102569
Danio
sp. (Zebrafish) : BC139588
Tetraodon
sp. (Tetraodon) : CR691756
Tetraodon
sp. (Tetraodon) : CR725457
Pongo
sp. (Orangutan) : CR860054
Oryzias
sp. (Medaka) : ENSORLT00000019304
Takifugu
sp. (Fugu) : SINFRUT00000143802
Takifugu
sp. (Fugu) : SINFRUT00000155926
Macaca
sp. (Macaque) : XM_001084197
Pan
sp. (Chimpanzee) : XM_001135485
Monodelphis
sp. (Opossum) : XM_001370882
Equus
sp. (Horse) : XM_001502706
Canis
sp. (Dog) : XM_861067
HIX0005437
HIT000207943 (
NM_020444
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,773,067 - 175,788,809 (15,743)
query : 1 - 2,826 (2,826/2,852)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 10.5, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000397908 (
NM_001079684
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,773,067 - 175,788,809 (15,743)
query : 1 - 2,739 (2,739/2,765)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, mito_pero 11.5, cyto 4, extr 3, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000397909 (
NM_001079685
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,773,067 - 175,788,809 (15,743)
query : 1 - 2,718 (2,718/2,744)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 10.5, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000032751
(
BC006316
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,773,067 - 175,788,742 (15,676)
query : 1 - 2,241 (2,241/2,258)
5 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
InterPro :
IPR026759 : Putative monooxygenase p33MONOX
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto 11, extr 6, cyto_mito 6, cyto_plas 6,
cyto_golg 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000035993
(
BC012848
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,773,067 - 175,788,745 (15,679)
query : 1 - 2,331 (2,331/2,345)
6 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
InterPro :
IPR026759 : Putative monooxygenase p33MONOX
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto_nucl 7.5, cyto 6.5, nucl 5.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000027470
(
AL832558
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,773,070 - 175,775,914 (2,845)
query : 1 - 2,844 (2,844/2,861)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
EC number :
EC 1.-.-.-
InterPro :
IPR026759 : Putative monooxygenase p33MONOX
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17.5, extr_plas 9.5, mito 7, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000034949
(
BC010448
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,773,071 - 175,788,745 (15,675)
query : 1 - 2,758 (2,758/2,773)
9 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
InterPro :
IPR026759 : Putative monooxygenase p33MONOX
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 10.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000026432
(
AL390217
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,773,067 - 175,788,768 (15,702)
query : 1 - 2,698 (2,698/2,707)
8 exons
identity = 0.997
3'(0.998;0.993;1.000;0.984;0.992;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
InterPro :
IPR026759 : Putative monooxygenase p33MONOX
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, mito_pero 11.5, cyto 4, extr 3, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000115122 (
ENST00000298569
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,773,064 - 175,788,971 (15,908)
query : 1 - 2,991 (2,991/2,991)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000477161 (
ENST00000393725
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,773,065 - 175,788,768 (15,704)
query : 1 - 2,700 (2,700/2,700)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, mito_pero 11.5, cyto 4, extr 3, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000477164 (
ENST00000393728
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,773,065 - 175,788,742 (15,678)
query : 1 - 2,243 (2,243/2,243)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto 11, extr 6, cyto_mito 6, cyto_plas 6,
cyto_golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000000907
(
AB033017
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,773,068 - 175,775,018 (1,951)
query : 1 - 1,837 (1,837/1,837)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000609979 (
ENST00000510164
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,774,497 - 175,788,764 (14,268)
query : 1 - 1,243 (1,243/1,243)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000434294
(
AK315428
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,774,603 - 175,788,767 (14,165)
query : 1 - 1,248 (1,248/1,248)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
InterPro :
IPR026759 : Putative monooxygenase p33MONOX
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 10.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000268181
(
CR457331
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,774,604 - 175,786,511 (11,908)
query : 1 - 917 (917/918)
7 exons
identity = 0.998
3'(0.995;0.993;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.-.-.-
InterPro :
IPR026759 : Putative monooxygenase p33MONOX
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 10.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000503659
(
DQ073392
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,774,603 - 175,786,511 (11,909)
query : 1 - 918 (918/918)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
InterPro :
IPR026759 : Putative monooxygenase p33MONOX
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 10.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0206809
HIT000608134 (
ENST00000508187
)
(Hypothetical protein.)
genome : 175,774,944 - 175,780,587 (5,644)
query : 1 - 504 (504/504)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 10, nucl 5, cyto_pero 5, cyto_plas 5,
cyto_golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206809)
HIX0005437
HIT000632631 (
ENST00000533553
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-;)
genome : 175,774,972 - 175,788,767 (13,796)
query : 1 - 560 (560/560)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto_nucl 7, nucl 6.5, cyto 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000607011 (
ENST00000506983
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,779,625 - 175,788,800 (9,176)
query : 1 - 502 (502/512)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.980
EC number :
EC 1.-.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000603393 (
ENST00000503082
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-;)
genome : 175,779,692 - 175,788,790 (9,099)
query : 1 - 639 (639/639)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 6.5, cyto_nucl 6.5, extr_plas 6.5,
mito_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000604876 (
ENST00000504688
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,779,706 - 175,788,767 (9,062)
query : 1 - 486 (486/486)
4 exons
identity = 0.992
3'(1.000;1.000;0.961;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 11.5, extr 9, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000606724 (
ENST00000506668
)
(Putative monooxygenase p33MONOX; EC=1.-.-.-; Brain-derived rescue factor p60MONOX; Flavin monooxygenase motif-containing protein of 33 kDa;)
genome : 175,780,199 - 175,788,738 (8,540)
query : 1 - 741 (741/741)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.-.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12, nucl 7.5, extr 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0207053
HIT000612549 (
ENST00000512934
)
(Conserved hypothetical protein.)
genome : 175,781,209 - 175,783,171 (1,963)
query : 1 - 528 (528/528)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207053)
HIX0005437
HIT000607982 (
ENST00000508023
)
(Hypothetical short protein.)
genome : 175,786,523 - 175,788,767 (2,245)
query : 1 - 562 (562/562)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0005437
HIT000606673 (
ENST00000506613
)
(Hypothetical short protein.)
genome : 175,786,528 - 175,788,565 (2,038)
query : 1 - 540 (540/540)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 8, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005437)
HIX0032072
HIT000118687 (
ENST00000310389
)
(ADP-ribosylation factor-like protein 10;)
genome : 175,792,471 - 175,808,912 (16,442)
query : 1 - 10,845 (10,845/10,845)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, E.R. 5, mito 4, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032072)
HIX0032072
HIT000259961
(
BC059361
)
Representative transcript
(ADP-ribosylation factor-like protein 10.)
genome : 175,792,471 - 175,796,962 (4,492)
query : 1 - 1,634 (1,634/1,650)
3 exons
identity = 0.991
5'(0.996;1.000;0.989)3'
coverage = 1.000
InterPro :
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr 9, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032072)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF205936
Bos
sp. (Cow) : BC114798
Gallus
sp. (Chicken) : BX933616
Danio
sp. (Zebrafish) : ENSDART00000085997
Oryzias
sp. (Medaka) : ENSORLT00000013707
Pongo
sp. (Orangutan) : ENSPPYT00000018703
Rattus
sp. (Rat) : ENSRNOT00000023200
Tetraodon
sp. (Tetraodon) : GSTENT00024512001
Takifugu
sp. (Fugu) : SINFRUT00000142063
Macaca
sp. (Macaque) : XM_001084431
Pan
sp. (Chimpanzee) : XM_001135736
Monodelphis
sp. (Opossum) : XM_001380865
HIX0032072
HIT000215040 (
NM_173664
)
(ADP-ribosylation factor-like protein 10;)
genome : 175,792,502 - 175,800,503 (8,002)
query : 1 - 2,405 (2,405/2,405)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, E.R. 5, mito 4, lyso 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032072)
HIX0032072
HIT000607159 (
ENST00000507151
)
(ADP-ribosylation factor-like protein 10.)
genome : 175,793,541 - 175,796,130 (2,590)
query : 1 - 365 (365/365)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9, nucl 7.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032072)
HIX0032072
HIT000614022 (
ENST00000514533
)
(Conserved hypothetical protein.)
genome : 175,795,853 - 175,828,866 (33,014)
query : 1 - 258 (258/258)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 8, nucl 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032072)
HIX0032072
HIT000603481 (
ENST00000503175
)
(Nucleolar protein 16 isoform 3.)
genome : 175,795,950 - 175,815,639 (19,690)
query : 1 - 380 (380/380)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 10.5, cyto 10, extr 5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032072)
HIX0032072
HIT000044950
(
AK125077
)
(Conserved hypothetical protein.)
genome : 175,802,969 - 175,807,380 (4,412)
query : 1 - 3,827 (3,827/3,827)
2 exons
identity = 0.994
5'(0.992;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 4, extr 2, mito 2, cyto_pero 2,
cyto_plas 2, cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032072)
HIX0032072
HIT000066950
(
AF086071
)
(Conserved hypothetical protein.)
genome : 175,808,459 - 175,808,912 (454)
query : 1 - 454 (454/463)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto 10.5, cyto_nucl 10.1667, cyto_pero 8,
nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032072)
HIX0005440
HIT000089906
(
BC019331
)
(Nucleolar protein 16 isoform 2.)
genome : 175,810,949 - 175,815,763 (4,815)
query : 1 - 954 (954/998)
5 exons
identity = 0.998
3'(0.994;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019002 : Ribosome biogenesis protein Nop16
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000052319
(
BC040106
)
Representative transcript
(Nucleolar protein 16; HBV pre-S2 trans-regulated protein 3;)
genome : 175,810,942 - 175,815,588 (4,647)
query : 1 - 877 (877/900)
5 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR019002 : Ribosome biogenesis protein Nop16
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000001966
(
AF151019
)
(HIG1 domain family member 2A, mitochondrial; RCF1 homolog B; RCF1b;)
genome : 175,810,949 - 175,815,928 (4,980)
query : 1 - 1,205 (1,205/1,231)
5 exons
identity = 0.988
3'(0.993;1.000;1.000;0.982;0.980)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000206107 (
NM_016391
)
(Ribosome biogenesis protein Nop16 family protein.)
genome : 175,810,940 - 175,815,763 (4,824)
query : 1 - 1,052 (1,052/1,069)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000723721 (
NM_001256539
)
(Ribosome biogenesis protein Nop16 family protein.)
genome : 175,810,940 - 175,815,763 (4,824)
query : 1 - 964 (964/981)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000723722 (
NM_001256540
)
(Ribosome biogenesis protein Nop16 family protein.)
genome : 175,810,940 - 175,815,763 (4,824)
query : 1 - 961 (961/978)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000002063
(
AF161460
)
(Nucleolar protein 16; HBV pre-S2 trans-regulated protein 3;)
genome : 175,810,949 - 175,815,602 (4,654)
query : 1 - 884 (884/910)
5 exons
identity = 0.995
3'(0.995;1.000;1.000;1.000;0.988)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000092651
(
BC032424
)
(Nucleolar protein 16; HBV pre-S2 trans-regulated protein 3;)
genome : 175,810,949 - 175,815,561 (4,613)
query : 11 - 765 (755/779)
5 exons
identity = 0.997
3'(0.994;1.000;1.000;1.000;1.000)5'
coverage = 0.987
InterPro :
IPR019002 : Ribosome biogenesis protein Nop16
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000071688
(
AF151875
)
(Nucleolar protein 16; HBV pre-S2 trans-regulated protein 3;)
genome : 175,810,949 - 175,815,976 (5,028)
query : 21 - 1,278 (1,258/1,280)
5 exons
identity = 0.995
3'(0.991;1.000;1.000;1.000;0.996)5'
coverage = 0.983
InterPro :
IPR019002 : Ribosome biogenesis protein Nop16
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000396068 (
ENST00000389158
)
(Ribosome biogenesis protein Nop16 family protein.)
genome : 175,810,949 - 175,815,976 (5,028)
query : 1 - 1,256 (1,256/1,256)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000609943 (
ENST00000510123
)
(Ribosome biogenesis protein Nop16 family protein.)
genome : 175,810,949 - 175,815,763 (4,815)
query : 1 - 952 (952/952)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000495507
(
AK300883
)
(Nucleolar protein 16 isoform 2.)
genome : 175,810,950 - 175,815,607 (4,658)
query : 1 - 797 (797/797)
5 exons
identity = 0.996
3'(0.991;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019002 : Ribosome biogenesis protein Nop16
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000607409 (
ENST00000507413
)
(Conserved hypothetical protein.)
genome : 175,810,961 - 175,815,576 (4,616)
query : 1 - 470 (470/470)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 8, extr 4, cyto_pero 4, cyto_plas 4,
cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000602997 (
ENST00000502663
)
(Ribosome biogenesis protein Nop16 family protein.)
genome : 175,811,209 - 175,815,588 (4,380)
query : 1 - 551 (551/551)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000255481
(
AY561704
)
(Nucleolar protein 16; HBV pre-S2 trans-regulated protein 3;)
genome : 175,811,232 - 175,815,540 (4,309)
query : 1 - 537 (537/537)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019002 : Ribosome biogenesis protein Nop16
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000268019
(
CR457169
)
(Nucleolar protein 16; HBV pre-S2 trans-regulated protein 3;)
genome : 175,811,236 - 175,815,540 (4,305)
query : 1 - 533 (533/537)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.993
InterPro :
IPR019002 : Ribosome biogenesis protein Nop16
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000604113 (
ENST00000503849
)
(Ribosome biogenesis protein Nop16 family protein.)
genome : 175,811,335 - 175,815,599 (4,265)
query : 1 - 582 (582/582)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 7.5, cyto_nucl 6.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000609132 (
ENST00000509257
)
(Ribosome biogenesis protein Nop16 family protein.)
genome : 175,811,644 - 175,815,569 (3,926)
query : 1 - 1,000 (1,000/1,000)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000604994 (
ENST00000504821
)
(Ribosome biogenesis protein Nop16 family protein.)
genome : 175,812,221 - 175,815,572 (3,352)
query : 1 - 532 (532/544)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.978
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 15, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000602917 (
ENST00000502577
)
(Ribosome biogenesis protein Nop16 family protein.)
genome : 175,812,942 - 175,815,599 (2,658)
query : 1 - 513 (513/513)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 12, nucl 11, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000497905
(
AK303281
)
(Nucleolar protein 16 isoform 3.)
genome : 175,813,025 - 175,815,599 (2,575)
query : 1 - 1,159 (1,159/1,159)
3 exons
identity = 0.997
3'(0.997;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019002 : Ribosome biogenesis protein Nop16
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005440
HIT000610386 (
ENST00000510608
)
(Ribosome biogenesis protein Nop16 family protein.)
genome : 175,813,025 - 175,815,599 (2,575)
query : 1 - 1,161 (1,161/1,161)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005440)
HIX0005439
HIT000111216_01 (
ENST00000274787
)
(HIG1 domain family member 2A, mitochondrial; RCF1 homolog B; RCF1b;)
genome : 175,815,748 - 175,816,772 (1,025)
query : 1 - 668 (668/668)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_mito 9, cyto 8.5, mito 8.5, plas 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005439)
HIX0005439
HIT000029754
(
BC000587
)
Representative transcript
(HIG1 domain family member 2A, mitochondrial; RCF1 homolog B; RCF1b;)
genome : 175,815,779 - 175,816,761 (983)
query : 10 - 635 (626/657)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.998
InterPro :
IPR007667 : Hypoxia induced protein, domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_mito 9, cyto 8.5, mito 8.5, plas 7, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005439)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK005269
Bos
sp. (Cow) : BC123383
Gallus
sp. (Chicken) : CR353161
Tetraodon
sp. (Tetraodon) : CR714923
Equus
sp. (Horse) : ENSECAT00000022244
Oryzias
sp. (Medaka) : ENSORLT00000008565
Pongo
sp. (Orangutan) : ENSPPYT00000018705
Takifugu
sp. (Fugu) : SINFRUT00000137215
Rattus
sp. (Rat) : XM_001070385
Macaca
sp. (Macaque) : XM_001084675
Monodelphis
sp. (Opossum) : XM_001380871
Canis
sp. (Dog) : XM_861054
HIX0005439
HIT000033256
(
BC007502
)
(HIG1 domain family member 2A, mitochondrial; RCF1 homolog B; RCF1b;)
genome : 175,815,784 - 175,816,751 (968)
query : 1 - 611 (611/628)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007667 : Hypoxia induced protein, domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_mito 9, cyto 8.5, mito 8.5, plas 7, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005439)
HIX0005439
HIT000212577 (
NM_138820
)
(HIG1 domain family member 2A, mitochondrial; RCF1 homolog B; RCF1b;)
genome : 175,815,784 - 175,816,751 (968)
query : 1 - 611 (611/628)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_mito 9, cyto 8.5, mito 8.5, plas 7, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005439)
HIX0121008
HIT000323847
(
X81637
)
Representative transcript
(Conserved hypothetical protein.)
genome : 175,819,345 - 175,825,274 (5,930)
query : 1 - 5,931 (5,931/5,938)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0121008)
HIX0005441
HIT000198766 (
NM_001834
)
(Clathrin light chain B isoform a.)
genome : 175,819,456 - 175,843,570 (24,115)
query : 1 - 1,160 (1,160/1,226)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 10, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
HIX0005441
HIT000203626 (
NM_007097
)
(Clathrin light chain B; Lcb;)
genome : 175,819,456 - 175,843,570 (24,115)
query : 1 - 1,214 (1,214/1,280)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.5, nucl 8.5, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
HIX0005441
HIT000726408 (
NR_045724
)
(Clathrin light chain B; Lcb;)
genome : 175,819,456 - 175,843,570 (24,115)
query : 1 - 1,712 (1,712/1,778)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12, extr 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
HIX0005441
HIT000032763
(
BC006332
)
(Clathrin light chain B isoform a.)
genome : 175,819,456 - 175,843,508 (24,053)
query : 1 - 1,098 (1,098/1,164)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR000996 : Clathrin light chain
GO :
0005198 : Molecular Function : structural molecule activity
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030130 : Cellular Component : clathrin coat of trans-Golgi network vesicle
0030132 : Cellular Component : clathrin coat of coated pit
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 10, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
HIX0005441
HIT000032844
(
BC006457
)
(Clathrin light chain B isoform a.)
genome : 175,819,487 - 175,843,494 (24,008)
query : 1 - 1,053 (1,053/1,099)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR000996 : Clathrin light chain
GO :
0005198 : Molecular Function : structural molecule activity
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030130 : Cellular Component : clathrin coat of trans-Golgi network vesicle
0030132 : Cellular Component : clathrin coat of coated pit
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 10, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
HIX0005441
HIT000118698 (
ENST00000310418
)
(Clathrin light chain B; Lcb;)
genome : 175,819,456 - 175,843,570 (24,115)
query : 1 - 1,215 (1,215/1,215)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.5, nucl 8.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
HIX0005441
HIT000307206 (
ENST00000345807
)
(Clathrin light chain B isoform a.)
genome : 175,819,456 - 175,843,570 (24,115)
query : 1 - 1,161 (1,161/1,161)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 10, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
HIX0005441
HIT000194730
(
M20470
)
(Clathrin light chain B isoform a.)
genome : 175,819,499 - 175,843,505 (24,007)
query : 1 - 1,051 (1,051/1,051)
5 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR000996 : Clathrin light chain
GO :
0005198 : Molecular Function : structural molecule activity
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030130 : Cellular Component : clathrin coat of trans-Golgi network vesicle
0030132 : Cellular Component : clathrin coat of coated pit
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 10, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
HIX0005441
HIT000194729
(
M20469
)
Representative transcript
(Clathrin light chain B; Lcb;)
genome : 175,819,503 - 175,843,530 (24,028)
query : 8 - 1,134 (1,127/1,134)
6 exons
identity = 0.977
3'(1.000;1.000;1.000;1.000;1.000;0.927)5'
coverage = 0.994
InterPro :
IPR000996 : Clathrin light chain
GO :
0005198 : Molecular Function : structural molecule activity
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030130 : Cellular Component : clathrin coat of trans-Golgi network vesicle
0030132 : Cellular Component : clathrin coat of coated pit
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.5, nucl 8.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720113
Mus
sp. (Mouse) : BC070404
Bos
sp. (Cow) : BC148120
Tetraodon
sp. (Tetraodon) : CR698430
Equus
sp. (Horse) : ENSECAT00000017599
Oryzias
sp. (Medaka) : ENSORLT00000008559
Pongo
sp. (Orangutan) : ENSPPYT00000018706
Rattus
sp. (Rat) : M15883
Takifugu
sp. (Fugu) : SINFRUT00000176860
Monodelphis
sp. (Opossum) : XM_001370928
Canis
sp. (Dog) : XM_546220
Macaca
sp. (Macaque) : XR_010995
Pan
sp. (Chimpanzee) : XR_022793
HIX0005441
HIT000608354 (
ENST00000508425
)
(Clathrin light chain B; Lcb;)
genome : 175,819,643 - 175,843,262 (23,620)
query : 1 - 527 (527/527)
4 exons
identity = 0.985
3'(1.000;0.932;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
HIX0005441
HIT000494824
(
AK300200
)
(Clathrin light chain B isoform a.)
genome : 175,819,650 - 175,843,540 (23,891)
query : 1 - 1,488 (1,488/1,488)
6 exons
identity = 0.999
3'(1.000;0.991;1.000;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR000996 : Clathrin light chain
GO :
0005198 : Molecular Function : structural molecule activity
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030130 : Cellular Component : clathrin coat of trans-Golgi network vesicle
0030132 : Cellular Component : clathrin coat of coated pit
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 6.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
HIX0005441
HIT000610493 (
ENST00000510734
)
(Clathrin light chain B; Lcb;)
genome : 175,819,650 - 175,843,540 (23,891)
query : 1 - 1,489 (1,489/1,489)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 6.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
HIX0005441
HIT000099948
(
BT007028
)
(Clathrin light chain B isoform a.)
genome : 175,819,775 - 175,843,364 (23,590)
query : 1 - 636 (636/636)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000996 : Clathrin light chain
GO :
0005198 : Molecular Function : structural molecule activity
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030130 : Cellular Component : clathrin coat of trans-Golgi network vesicle
0030132 : Cellular Component : clathrin coat of coated pit
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 10, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
HIX0005441
HIT000268513
(
CR536577
)
(Clathrin light chain B; Lcb;)
genome : 175,819,775 - 175,843,364 (23,590)
query : 1 - 636 (636/636)
5 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR000996 : Clathrin light chain
GO :
0005198 : Molecular Function : structural molecule activity
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030130 : Cellular Component : clathrin coat of trans-Golgi network vesicle
0030132 : Cellular Component : clathrin coat of coated pit
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 16, nucl 10, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
HIX0005441
HIT000603200 (
ENST00000502877
)
(Clathrin light chain B; Lcb;)
genome : 175,819,794 - 175,843,539 (23,746)
query : 1 - 552 (552/552)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 15, cyto 10, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
HIX0005441
HIT000607794 (
ENST00000507821
)
(Hypothetical short protein.)
genome : 175,832,591 - 175,833,341 (751)
query : 1 - 417 (417/417)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
HIX0005441
HIT000609190 (
ENST00000509319
)
(Hypothetical protein.)
genome : 175,833,168 - 175,834,592 (1,425)
query : 1 - 581 (581/581)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 13.5, nucl 12.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005441)
HIX0032299
HIT000247986
(
AJ431611
)
Representative transcript
(Hypothetical short protein.)
genome : 175,866,091 - 175,866,237 (147)
query : 1 - 148 (148/150)
1 exon
identity = 0.986
5'(0.986)3'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032299)
HIX0005438
HIT000610489 (
ENST00000510730
)
(FAS-associated factor 2; Protein ETEA; UBX domain-containing protein 3B; UBX domain-containing protein 8;)
genome : 175,874,629 - 175,913,428 (38,800)
query : 1 - 684 (684/684)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005438)
HIX0005438
HIT000108195 (
ENST00000261942
)
(FAS-associated factor 2; Protein ETEA; UBX domain-containing protein 3B; UBX domain-containing protein 8;)
genome : 175,875,356 - 175,937,075 (61,720)
query : 1 - 4,515 (4,515/4,515)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005438)
HIX0005438
HIT000204939 (
NM_014613
)
(FAS-associated factor 2; Protein ETEA; UBX domain-containing protein 3B; UBX domain-containing protein 8;)
genome : 175,875,356 - 175,937,075 (61,720)
query : 1 - 4,515 (4,515/4,515)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 13.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005438)
HIX0005438
HIT000085951
(
BC001069
)
(FAS-associated factor 2; Protein ETEA; UBX domain-containing protein 3B; UBX domain-containing protein 8;)
genome : 175,875,378 - 175,934,025 (58,648)
query : 1 - 1,443 (1,443/1,460)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001012 : UBX domain
IPR006577 : UAS
IPR009060 : UBA-like
IPR012336 : Thioredoxin-like fold
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005438)
HIX0005438
HIT000498970
(
AK304346
)
(FAS-associated factor 2; Protein ETEA; UBX domain-containing protein 3B; UBX domain-containing protein 8;)
genome : 175,875,386 - 175,934,571 (59,186)
query : 1 - 912 (912/912)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR009060 : UBA-like
IPR012336 : Thioredoxin-like fold
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 13, nucl 9, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005438)
HIX0005438
HIT000036460
(
BC014001
)
(FAS-associated factor 2; Protein ETEA; UBX domain-containing protein 3B; UBX domain-containing protein 8;)
genome : 175,875,397 - 175,934,638 (59,242)
query : 1 - 2,037 (2,037/2,059)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001012 : UBX domain
IPR006577 : UAS
IPR009060 : UBA-like
IPR012336 : Thioredoxin-like fold
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005438)
HIX0005438
HIT000086600
(
BC006145
)
(FAS-associated factor 2; Protein ETEA; UBX domain-containing protein 3B; UBX domain-containing protein 8;)
genome : 175,875,397 - 175,934,638 (59,242)
query : 1 - 2,037 (2,037/2,059)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001012 : UBX domain
IPR006577 : UAS
IPR009060 : UBA-like
IPR012336 : Thioredoxin-like fold
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005438)
HIX0005438
HIT000061463
(
AB088120
)
Representative transcript
(FAS-associated factor 2; Protein ETEA; UBX domain-containing protein 3B; UBX domain-containing protein 8;)
genome : 175,875,403 - 175,937,075 (61,673)
query : 1 - 4,475 (4,475/4,503)
11 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR001012 : UBX domain
IPR006577 : UAS
IPR009060 : UBA-like
IPR012336 : Thioredoxin-like fold
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005438)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC046817
Rattus
sp. (Rat) : BC091224
Bos
sp. (Cow) : BC105572
Gallus
sp. (Chicken) : BX931953
Monodelphis
sp. (Opossum) : ENSMODT00000006507
Oryzias
sp. (Medaka) : ENSORLT00000009139
Pongo
sp. (Orangutan) : ENSPPYT00000018707
Pan
sp. (Chimpanzee) : ENSPTRT00000032460
Tetraodon
sp. (Tetraodon) : GSTENT00010205001
Takifugu
sp. (Fugu) : SINFRUT00000164040
Macaca
sp. (Macaque) : XM_001090859
Equus
sp. (Horse) : XM_001502650
Canis
sp. (Dog) : XM_546218
HIX0005438
HIT000000604
(
AB020694
)
(FAS-associated factor 2; Protein ETEA; UBX domain-containing protein 3B; UBX domain-containing protein 8;)
genome : 175,875,414 - 175,937,074 (61,661)
query : 1 - 4,456 (4,456/4,456)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005438)
HIX0005438
HIT000606149 (
ENST00000506061
)
(Hypothetical short protein.)
genome : 175,875,430 - 175,880,560 (5,131)
query : 1 - 337 (337/337)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, cyto_plas 12, extr 6,
nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005438)
HIX0164547
HIT000506540 (
ENST00000408446
)
(Non-protein coding transcript.)
genome : 175,878,763 - 175,878,873 (111)
query : 1 - 111 (111/111)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164547)
HIX0005438
HIT000610239 (
ENST00000510446
)
(FAS-associated factor 2; Protein ETEA; UBX domain-containing protein 3B; UBX domain-containing protein 8;)
genome : 175,880,140 - 175,916,028 (35,889)
query : 1 - 756 (756/756)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 12, nucl 9.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005438)
HIX0005438
HIT000605144 (
ENST00000504983
)
(FAS-associated factor 2; Protein ETEA; UBX domain-containing protein 3B; UBX domain-containing protein 8;)
genome : 175,919,240 - 175,925,978 (6,739)
query : 1 - 613 (613/613)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, extr 12, nucl 10, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005438)
HIX0005438
HIT000613185 (
ENST00000513627
)
(FAS-associated factor 2; Protein ETEA; UBX domain-containing protein 3B; UBX domain-containing protein 8;)
genome : 175,921,023 - 175,923,987 (2,965)
query : 1 - 656 (656/656)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6, nucl 4.5, cyto 4.5, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005438)
HIX0005438
HIT000088808
(
BC015791
)
(Conserved hypothetical protein.)
genome : 175,935,150 - 175,937,066 (1,917)
query : 1 - 1,919 (1,919/1,980)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005438)
HIX0005442
HIT000029219
(
AL834489
)
(RING finger protein 44;)
genome : 175,953,714 - 175,970,421 (16,708)
query : 37 - 3,691 (3,655/3,747)
10 exons
identity = 0.967
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.868;0.615)5'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 11.5, cyto 11.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005442)
HIX0005442
HIT000111220 (
ENST00000274811
)
(RING finger protein 44;)
genome : 175,953,698 - 175,964,421 (10,724)
query : 1 - 4,155 (4,155/4,155)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 12.5, cyto_nucl 6, nucl 5.5,
cyto 5, cyto_pero 4.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005442)
HIX0005442
HIT000260818
(
BC063297
)
Representative transcript
(RING finger protein 44;)
genome : 175,953,714 - 175,964,421 (10,708)
query : 1 - 4,140 (4,140/4,155)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 12.5, cyto_nucl 6, nucl 5.5,
cyto 5, cyto_pero 4.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005442)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC035548
Rattus
sp. (Rat) : BC098030
Bos
sp. (Cow) : ENSBTAT00000023598
Equus
sp. (Horse) : ENSECAT00000009508
Oryzias
sp. (Medaka) : ENSORLT00000009103
Oryzias
sp. (Medaka) : ENSORLT00000017999
Pongo
sp. (Orangutan) : ENSPPYT00000018795
Tetraodon
sp. (Tetraodon) : GSTENT00010204001
Takifugu
sp. (Fugu) : SINFRUT00000164038
Macaca
sp. (Macaque) : XM_001091221
Pan
sp. (Chimpanzee) : XM_001136577
Monodelphis
sp. (Opossum) : XM_001380885
Danio
sp. (Zebrafish) : XM_690108
Canis
sp. (Dog) : XM_860890
HIX0005442
HIT000205182 (
NM_014901
)
(RING finger protein 44;)
genome : 175,953,700 - 175,964,421 (10,722)
query : 1 - 4,153 (4,153/4,153)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 12.5, cyto_nucl 6, nucl 5.5,
cyto 5, cyto_pero 4.16667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005442)
HIX0005442
HIT000052263
(
BC039833
)
(RING finger protein 44;)
genome : 175,953,714 - 175,964,378 (10,665)
query : 1 - 4,095 (4,095/4,109)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 12.5, cyto_nucl 6, nucl 5.5,
cyto 5, cyto_pero 4.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005442)
HIX0005442
HIT000000817
(
AB029023
)
(RING finger protein 44;)
genome : 175,953,715 - 175,964,306 (10,592)
query : 1 - 4,023 (4,023/4,023)
11 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 12.5, cyto_nucl 6, nucl 5.5,
cyto 5, cyto_pero 4.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005442)
HIX0005442
HIT000047546
(
AK127673
)
(RING finger protein 44;)
genome : 175,953,715 - 175,956,809 (3,095)
query : 1 - 2,533 (2,533/2,533)
3 exons
identity = 0.999
3'(1.000;0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 11, nucl 10, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005442)
HIX0005442
HIT000606443 (
ENST00000506378
)
(RING finger protein 44;)
genome : 175,955,940 - 175,957,646 (1,707)
query : 1 - 848 (848/848)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 14, cyto 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005442)
HIX0005442
HIT000497009
(
AK302385
)
(RING finger protein 44;)
genome : 175,955,959 - 175,965,026 (9,068)
query : 1 - 1,647 (1,647/1,647)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 11.5, cyto 11.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005442)
HIX0005442
HIT000612631 (
ENST00000513029
)
(RING finger protein 44;)
genome : 175,955,959 - 175,965,026 (9,068)
query : 1 - 1,647 (1,647/1,647)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 11.5, cyto 11.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005442)
HIX0005442
HIT000636532 (
ENST00000537487
)
(RING finger protein 44;)
genome : 175,955,959 - 175,965,026 (9,068)
query : 1 - 1,647 (1,647/1,647)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 11.5, cyto 11.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005442)
HIX0005442
HIT000614509 (
ENST00000515051
)
(RING finger protein 44;)
genome : 175,956,079 - 175,956,809 (731)
query : 1 - 596 (596/596)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 11, nucl 10, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005442)
HIX0005442
HIT000608406 (
ENST00000508478
)
(RING finger protein 44;)
genome : 175,956,489 - 175,957,611 (1,123)
query : 1 - 662 (662/662)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 8.66667, nucl 8, extr 5, cyto 5,
cyto_pero 4.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005442)
HIX0005442
HIT000604400 (
ENST00000504160
)
(RING finger protein 44;)
genome : 175,957,938 - 175,964,297 (6,360)
query : 1 - 887 (887/887)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005442)
HIX0005442
HIT000604651 (
ENST00000504434
)
(RING finger protein 44;)
genome : 175,958,883 - 175,964,881 (5,999)
query : 1 - 785 (785/785)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005442)
HIX0005442
HIT000609271 (
ENST00000509404
)
(Hypothetical short protein.)
genome : 175,959,481 - 175,963,331 (3,851)
query : 1 - 372 (372/372)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005442)
HIX0005443
HIT000610410 (
ENST00000510636
)
(Cadherin-related family member 2; Protocadherin LKC; PC-LKC; Protocadherin-24; Precursor;)
genome : 175,969,512 - 176,022,975 (53,464)
query : 1 - 4,509 (4,509/4,509)
32 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.988;0.987;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005443)
HIX0005443
HIT000654866 (
NM_001171976
)
(Cadherin-related family member 2; Protocadherin LKC; PC-LKC; Protocadherin-24; Precursor;)
genome : 175,969,512 - 176,022,769 (53,258)
query : 1 - 4,303 (4,303/4,313)
32 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.988;0.987;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005443)
HIX0005443
HIT000433921
(
AK315055
)
Representative transcript
(Cadherin-related family member 2; Protocadherin LKC; PC-LKC; Protocadherin-24; Precursor;)
genome : 175,969,512 - 176,022,673 (53,162)
query : 1 - 4,207 (4,207/4,207)
32 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;0.988;0.980;1.000;
1.000;0.996;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.984;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002126 : Cadherin
IPR015919 : Cadherin-like
IPR020894 : Cadherin conserved site
GO :
0005509 : Molecular Function : calcium ion binding
0005886 : Cellular Component : plasma membrane
0007155 : Biological Process : cell adhesion
0007156 : Biological Process : homophilic cell adhesion
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 3, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005443)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK144400
Canis
sp. (Dog) : ENSCAFT00000026388
Oryzias
sp. (Medaka) : ENSORLT00000009076
Pongo
sp. (Orangutan) : ENSPPYT00000018789
Takifugu
sp. (Fugu) : SINFRUT00000164032
Rattus
sp. (Rat) : XM_001070261
Monodelphis
sp. (Opossum) : XM_001380893
Equus
sp. (Horse) : XM_001917135
Gallus
sp. (Chicken) : XM_414546
Bos
sp. (Cow) : XM_589349
Macaca
sp. (Macaque) : XR_010104
Pan
sp. (Chimpanzee) : XR_022818
HIX0005443
HIT000609944 (
ENST00000510124
)
(Cadherin-related family member 2; Protocadherin LKC; PC-LKC; Protocadherin-24; Precursor;)
genome : 175,970,542 - 175,995,768 (25,227)
query : 1 - 575 (575/575)
5 exons
identity = 0.991
5'(1.000;1.000;1.000;0.977;0.988)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005443)
HIX0005443
HIT000048319
(
AK128446
)
(Conserved hypothetical protein.)
genome : 175,970,634 - 175,973,613 (2,980)
query : 3 - 2,991 (2,989/2,991)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005443)
HIX0005443
HIT000206552 (
NM_017675
)
(Cadherin-related family member 2; Protocadherin LKC; PC-LKC; Protocadherin-24; Precursor;)
genome : 175,976,343 - 176,022,769 (46,427)
query : 1 - 4,117 (4,117/4,127)
32 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.988;0.987;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005443)
HIX0005443
HIT000108196 (
ENST00000261944
)
(Cadherin-related family member 2; Protocadherin LKC; PC-LKC; Protocadherin-24; Precursor;)
genome : 175,976,392 - 176,022,769 (46,378)
query : 1 - 4,068 (4,068/4,068)
32 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.988;0.987;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005443)
HIX0005443
HIT000390072
(
BC130282
)
(Cadherin-related family member 2; Protocadherin LKC; PC-LKC; Protocadherin-24; Precursor;)
genome : 175,992,307 - 176,022,698 (30,392)
query : 1 - 4,005 (4,005/4,005)
31 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;0.988;0.980;1.000;1.000;
0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.984;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002126 : Cadherin
IPR015919 : Cadherin-like
IPR020894 : Cadherin conserved site
GO :
0005509 : Molecular Function : calcium ion binding
0005886 : Cellular Component : plasma membrane
0007155 : Biological Process : cell adhesion
0007156 : Biological Process : homophilic cell adhesion
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 3, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005443)
HIX0005443
HIT000606417 (
ENST00000506348
)
(Cadherin-related family member 2; Protocadherin LKC; PC-LKC; Protocadherin-24; Precursor;)
genome : 175,992,307 - 176,022,698 (30,392)
query : 1 - 4,005 (4,005/4,005)
31 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.988;0.987;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005443)
HIX0005443
HIT000059471
(
AB047004
)
(Cadherin-related family member 2; Protocadherin LKC; PC-LKC; Protocadherin-24; Precursor;)
genome : 175,992,337 - 176,022,769 (30,433)
query : 22 - 4,067 (4,046/4,088)
31 exons
identity = 0.998
5'(1.000;1.000;0.993;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;0.988;0.980;1.000;1.000;
0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.984;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.995
InterPro :
IPR002126 : Cadherin
IPR015919 : Cadherin-like
IPR020894 : Cadherin conserved site
GO :
0005509 : Molecular Function : calcium ion binding
0005886 : Cellular Component : plasma membrane
0007155 : Biological Process : cell adhesion
0007156 : Biological Process : homophilic cell adhesion
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 3, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005443)
HIX0005443
HIT000002865
(
AK000390
)
(Cadherin-related family member 2; Protocadherin LKC; PC-LKC; Protocadherin-24; Precursor;)
genome : 175,998,256 - 176,022,769 (24,514)
query : 1 - 3,671 (3,671/3,692)
27 exons
identity = 0.997
5'(1.000;1.000;0.992;1.000;1.000;1.000;0.988;
0.974;1.000;1.000;0.996;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.984;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 17, extr 8, extr_plas 7.5, plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005443)
HIX0005443
HIT000002606
(
AK000131
)
(Cadherin-related family member 2; Protocadherin LKC; PC-LKC; Protocadherin-24; Precursor;)
genome : 176,005,565 - 176,022,769 (17,205)
query : 1 - 2,256 (2,256/2,274)
17 exons
identity = 0.999
5'(1.000;0.996;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;1.000;
0.988;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10.5, nucl 5.5, mito 5, plas 4.5,
extr_plas 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005443)
HIX0005443
HIT000384347
(
AK225217
)
(Cadherin-related family member 2; Protocadherin LKC; PC-LKC; Protocadherin-24; Precursor;)
genome : 176,005,565 - 176,022,769 (17,205)
query : 1 - 2,256 (2,256/2,274)
17 exons
identity = 0.999
5'(1.000;0.996;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;1.000;
0.988;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002126 : Cadherin
IPR015919 : Cadherin-like
IPR020894 : Cadherin conserved site
GO :
0005509 : Molecular Function : calcium ion binding
0005886 : Cellular Component : plasma membrane
0007155 : Biological Process : cell adhesion
0007156 : Biological Process : homophilic cell adhesion
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10.5, nucl 5.5, mito 5, plas 4.5,
extr_plas 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005443)
HIX0005443
HIT000612633 (
ENST00000513031
)
(Cadherin-related family member 2; Protocadherin LKC; PC-LKC; Protocadherin-24; Precursor;)
genome : 176,013,652 - 176,017,662 (4,011)
query : 1 - 849 (849/849)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 13, extr 11, plas 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005443)
HIX0005443
HIT000608038 (
ENST00000508085
)
(Cadherin-related family member 2; Protocadherin LKC; PC-LKC; Protocadherin-24; Precursor;)
genome : 176,013,660 - 176,016,571 (2,912)
query : 1 - 577 (577/577)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005443)
HIX0005443
HIT000514299 (
ENST00000416365
)
(Cadherin-related family member 2; Protocadherin LKC; PC-LKC; Protocadherin-24; Precursor;)
genome : 176,017,602 - 176,018,691 (1,090)
query : 1 - 488 (488/488)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, E.R. 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005443)
HIX0024920
HIT000048751
(
AK128878
)
Representative transcript
(Conserved hypothetical protein.)
genome : 176,020,206 - 176,020,902 (697)
query : 1 - 697 (697/697)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 9.83333, nucl 8.5, cyto 8,
cyto_pero 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024920)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000018708
HIX0200714
HIT000053835
(
BC052950
)
(G protein-regulated inducer of neurite outgrowth 1; GRIN1;)
genome : 176,022,804 - 176,037,131 (14,328)
query : 1 - 4,207 (4,207/4,222)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16.3333, cyto 6.5,
cyto_golg 4.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200714)
HIX0200714
HIT000116601 (
ENST00000303991
)
(G protein-regulated inducer of neurite outgrowth 1; GRIN1;)
genome : 176,022,803 - 176,037,134 (14,332)
query : 1 - 4,211 (4,211/4,211)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16.3333, cyto 6.5,
cyto_golg 4.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200714)
HIX0200714
HIT000317716 (
NM_052899
)
(G protein-regulated inducer of neurite outgrowth 1; GRIN1;)
genome : 176,022,803 - 176,037,131 (14,329)
query : 1 - 4,208 (4,208/4,208)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16.3333, cyto 6.5,
cyto_golg 4.66667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200714)
HIX0200714
HIT000001608
(
AB067480
)
Representative transcript
(G protein-regulated inducer of neurite outgrowth 1.)
genome : 176,022,805 - 176,037,137 (14,333)
query : 1 - 3,517 (3,517/3,517)
3 exons
identity = 0.997
3'(0.996;0.999;0.979)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14.1667, cyto 9.5,
cyto_golg 7.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200714)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK138306
Canis
sp. (Dog) : ENSCAFT00000036868
Equus
sp. (Horse) : ENSECAT00000002039
Macaca
sp. (Macaque) : ENSMMUT00000018649
Pongo
sp. (Orangutan) : ENSPPYT00000018709
Pan
sp. (Chimpanzee) : ENSPTRT00000032466
Monodelphis
sp. (Opossum) : XM_001380897
Rattus
sp. (Rat) : XM_344571
Bos
sp. (Cow) : XR_028004
HIX0200714
HIT000028895
(
AL834165
)
(G protein-regulated inducer of neurite outgrowth 1.)
genome : 176,024,146 - 176,026,289 (2,144)
query : 1 - 2,119 (2,119/2,119)
1 exon
identity = 0.983
3'(0.983)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14.8333, cyto 8,
cyto_golg 5.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200714)
HIX0005445
HIT000328964
(
AB209029
)
(Beta-synuclein;)
genome : 176,044,345 - 176,056,691 (12,347)
query : 1 - 5,714 (5,714/5,714)
3 exons
identity = 0.995
3'(0.998;0.988;0.998)5'
coverage = 1.000
InterPro :
IPR002461 : Beta-synuclein
GO :
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10, cyto_mito 10, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000118590 (
ENST00000310112
)
(Beta-synuclein;)
genome : 176,047,085 - 176,057,365 (10,281)
query : 1 - 1,383 (1,383/1,383)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 5, extr 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000031277
(
BC002902
)
Representative transcript
(Beta-synuclein;)
genome : 176,047,210 - 176,057,365 (10,156)
query : 1 - 1,259 (1,259/1,277)
7 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.992;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001058 : Synuclein
IPR002461 : Beta-synuclein
GO :
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 5, extr 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AY650316
Mus
sp. (Mouse) : BC019409
Rattus
sp. (Rat) : BC087579
Danio
sp. (Zebrafish) : BC095672
Bos
sp. (Cow) : BC118378
Takifugu
sp. (Fugu) : DQ177905
Gallus
sp. (Chicken) : ENSGALT00000040881
Monodelphis
sp. (Opossum) : ENSMODT00000040190
Oryzias
sp. (Medaka) : ENSORLT00000009053
Pongo
sp. (Orangutan) : ENSPPYT00000018710
Tetraodon
sp. (Tetraodon) : GSTENT00010198001
Pan
sp. (Chimpanzee) : XM_001136812
Canis
sp. (Dog) : XM_847475
HIX0005445
HIT000199949 (
NM_003085
)
(Beta-synuclein;)
genome : 176,047,210 - 176,057,557 (10,348)
query : 1 - 1,293 (1,293/1,310)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 5, extr 4, mito_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000315401 (
NM_001001502
)
(Beta-synuclein;)
genome : 176,047,210 - 176,057,557 (10,348)
query : 1 - 1,450 (1,450/1,467)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 5, extr 4, mito_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000715588
(
JF960950
)
(Beta-synuclein;)
genome : 176,047,210 - 176,057,557 (10,348)
query : 1 - 1,408 (1,408/1,425)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001058 : Synuclein
IPR002461 : Beta-synuclein
GO :
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000715589
(
JF960951
)
(Beta-synuclein;)
genome : 176,047,210 - 176,057,557 (10,348)
query : 1 - 1,360 (1,360/1,377)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001058 : Synuclein
IPR002461 : Beta-synuclein
GO :
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 7, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000715590
(
JF960952
)
(Beta-synuclein;)
genome : 176,047,210 - 176,057,557 (10,348)
query : 1 - 1,251 (1,251/1,268)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001058 : Synuclein
IPR002461 : Beta-synuclein
GO :
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000715591
(
JF960953
)
(Beta-synuclein;)
genome : 176,047,210 - 176,057,557 (10,348)
query : 1 - 1,203 (1,203/1,220)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001058 : Synuclein
IPR002461 : Beta-synuclein
GO :
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 7, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000477131 (
ENST00000393693
)
(Beta-synuclein;)
genome : 176,047,242 - 176,057,530 (10,289)
query : 1 - 1,234 (1,234/1,234)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 5, extr 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000216353
(
S69965
)
(Beta-synuclein;)
genome : 176,047,541 - 176,057,325 (9,785)
query : 1 - 730 (730/730)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001058 : Synuclein
IPR002461 : Beta-synuclein
GO :
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 5, extr 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000610188 (
ENST00000510387
)
(Beta-synuclein;)
genome : 176,047,682 - 176,056,995 (9,314)
query : 1 - 730 (730/730)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 5, extr 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000606749 (
ENST00000506696
)
(Beta-synuclein;)
genome : 176,047,786 - 176,057,001 (9,216)
query : 1 - 552 (552/552)
6 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;0.974)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 5, extr 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000099547
(
BT006627
)
(Beta-synuclein;)
genome : 176,047,812 - 176,056,655 (8,844)
query : 1 - 405 (405/405)
5 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR001058 : Synuclein
IPR002461 : Beta-synuclein
GO :
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 5, extr 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000267877
(
CR457027
)
(Beta-synuclein;)
genome : 176,047,813 - 176,056,655 (8,843)
query : 1 - 404 (404/405)
5 exons
identity = 0.998
3'(0.969;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR001058 : Synuclein
IPR002461 : Beta-synuclein
GO :
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 5, extr 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000428001
(
AK309135
)
(Beta-synuclein;)
genome : 176,048,214 - 176,057,049 (8,836)
query : 1 - 970 (970/971)
3 exons
identity = 0.999
3'(1.000;1.000;0.998)5'
coverage = 0.999
InterPro :
IPR001058 : Synuclein
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000607966 (
ENST00000508006
)
(Beta-synuclein;)
genome : 176,048,215 - 176,057,049 (8,835)
query : 1 - 969 (969/969)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000659502 (
NR_036239
)
(Non-protein coding transcript.)
genome : 176,056,440 - 176,056,501 (62)
query : 1 - 62 (62/62)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0005445
HIT000692762 (
ENST00000580852
)
(Non-protein coding transcript.)
genome : 176,056,440 - 176,056,501 (62)
query : 1 - 62 (62/62)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005445)
HIX0200743
HIT000121781 (
ENST00000318682
)
(Eukaryotic translation initiation factor 4E type 1B;)
genome : 176,057,683 - 176,073,642 (15,960)
query : 1 - 1,974 (1,974/1,974)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 5.5, mito 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200743)
HIX0200743
HIT000485368 (
NM_001099408
)
(Eukaryotic translation initiation factor 4E type 1B;)
genome : 176,057,683 - 176,073,642 (15,960)
query : 1 - 1,974 (1,974/1,974)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 5.5, mito 2, cysk 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200743)
HIX0200743
HIT000610265 (
ENST00000510473
)
(Conserved hypothetical protein.)
genome : 176,057,683 - 176,069,738 (12,056)
query : 1 - 533 (533/533)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 2, cyto 2, cyto_nucl 2, golg 2,
cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200743)
HIX0200743
HIT000019125
(
AK094270
)
Representative transcript
(Eukaryotic translation initiation factor 4E type 1B.)
genome : 176,057,956 - 176,073,642 (15,687)
query : 1 - 2,824 (2,824/2,824)
6 exons
identity = 1.000
5'(1.000;0.992;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001040 : Translation Initiation factor eIF- 4e
IPR023398 : Translation Initiation factor eIF- 4e-like domain
GO :
0003723 : Molecular Function : RNA binding
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0006413 : Biological Process : translational initiation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, extr 8, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200743)
Ortholog candidate ( ->
Evola
)
Tetraodon
sp. (Tetraodon) : CR725540
Mus
sp. (Mouse) : DQ279473
Bos
sp. (Cow) : ENSBTAT00000004037
Canis
sp. (Dog) : ENSCAFT00000026360
Monodelphis
sp. (Opossum) : ENSMODT00000006403
Rattus
sp. (Rat) : XM_001066554
Macaca
sp. (Macaque) : XM_001092045
Equus
sp. (Horse) : XM_001498575
HIX0200743
HIT000614891 (
ENST00000515458
)
(Eukaryotic translation initiation factor 4E type 1B.)
genome : 176,057,956 - 176,073,642 (15,687)
query : 1 - 2,836 (2,836/2,836)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, extr 8, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200743)
HIX0200743
HIT000610429 (
ENST00000510660
)
(Eukaryotic translation initiation factor 4E type 1B.)
genome : 176,057,956 - 176,070,709 (12,754)
query : 1 - 581 (581/581)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12, extr 8, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200743)
HIX0200743
HIT000604797 (
ENST00000504597
)
(Eukaryotic translation initiation factor 4E type 1B;)
genome : 176,068,673 - 176,073,608 (4,936)
query : 1 - 1,676 (1,676/1,676)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 5.5, mito 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200743)
HIX0200743
HIT000604156 (
ENST00000503895
)
(Eukaryotic translation initiation factor 4E type 1B.)
genome : 176,069,929 - 176,072,301 (2,373)
query : 1 - 564 (564/564)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13.5, extr 5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200743)
HIX0200743
HIT000605625 (
ENST00000505497
)
(Eukaryotic translation initiation factor 4E type 1B.)
genome : 176,070,624 - 176,072,982 (2,359)
query : 8 - 514 (507/514)
5 exons
identity = 0.990
5'(0.955;1.000;1.000;1.000;1.000)3'
coverage = 0.986
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6.5, cyto_nucl 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200743)
HIX0200743
HIT000612362 (
ENST00000512734
)
(Eukaryotic translation initiation factor 4E type 1B.)
genome : 176,071,581 - 176,073,141 (1,561)
query : 1 - 561 (561/561)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 4, extr 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200743)
HIX0005447
HIT000316298 (
NM_001006616
)
(Tetraspanin-17 isoform c.)
genome : 176,074,388 - 176,086,059 (11,672)
query : 1 - 2,547 (2,547/2,564)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.6.5.3
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0005447
HIT000317088 (
NM_012171
)
(Tetraspanin-17; Tspan-17; F-box only protein 23; Tetraspan protein SB134; Transmembrane 4 superfamily member 17;)
genome : 176,074,388 - 176,086,059 (11,672)
query : 1 - 2,588 (2,588/2,605)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.6.5.3
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0005447
HIT000317756 (
NM_130465
)
(Tetraspanin-17; Tspan-17; F-box only protein 23; Tetraspan protein SB134; Transmembrane 4 superfamily member 17;)
genome : 176,074,388 - 176,086,059 (11,672)
query : 1 - 2,579 (2,579/2,596)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.6.5.3
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0005447
HIT000505260 (
ENST00000405525
)
(Tetraspanin-17 isoform c.)
genome : 176,074,388 - 176,086,058 (11,671)
query : 1 - 2,555 (2,555/2,555)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.5.3
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0005447
HIT000118564 (
ENST00000310032
)
(Tetraspanin-17; Tspan-17; F-box only protein 23; Tetraspan protein SB134; Transmembrane 4 superfamily member 17;)
genome : 176,074,388 - 176,086,021 (11,634)
query : 1 - 2,550 (2,550/2,550)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0005447
HIT000083530
(
AY037146
)
(Tetraspanin-17 isoform b.)
genome : 176,074,468 - 176,086,055 (11,588)
query : 1 - 2,809 (2,809/2,815)
4 exons
identity = 0.997
5'(1.000;1.000;1.000;0.997)3'
coverage = 0.998
EC number :
EC 3.6.5.3
InterPro :
IPR018499 : Tetraspanin/Peripherin
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0005447
HIT000115119 (
ENST00000298564
)
(Tetraspanin-17; Tspan-17; F-box only protein 23; Tetraspan protein SB134; Transmembrane 4 superfamily member 17;)
genome : 176,074,468 - 176,086,055 (11,588)
query : 1 - 2,810 (2,810/2,810)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0005447
HIT000007701
(
AK024427
)
(Tetraspanin-17 isoform c.)
genome : 176,074,498 - 176,086,054 (11,557)
query : 1 - 4,445 (4,445/4,445)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;0.998;1.000;1.000;1.000;
0.996)3'
coverage = 1.000
EC number :
EC 3.6.5.3
InterPro :
IPR018499 : Tetraspanin/Peripherin
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, extr_plas 9, cyto 7, nucl 5, extr 3,
mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0005447
HIT000614181 (
ENST00000514705
)
(Tetraspanin-17 isoform c.)
genome : 176,074,498 - 176,086,054 (11,557)
query : 1 - 4,445 (4,445/4,445)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.6.5.3
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, extr_plas 9, cyto 7, nucl 5, extr 3,
mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0005447
HIT000262440
(
BC067105
)
Representative transcript
(Tetraspanin-17; Tspan-17; F-box only protein 23; Tetraspan protein SB134; Transmembrane 4 superfamily member 17;)
genome : 176,074,503 - 176,086,052 (11,550)
query : 1 - 2,457 (2,457/2,493)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000301 : Tetraspanin
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
IPR018503 : Tetraspanin, conserved site
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK166272
Rattus
sp. (Rat) : BC097431
Bos
sp. (Cow) : BC111310
Danio
sp. (Zebrafish) : BC160601
Oryzias
sp. (Medaka) : ENSORLT00000008977
Pongo
sp. (Orangutan) : ENSPPYT00000018712
Tetraodon
sp. (Tetraodon) : GSTENT00017140001
Takifugu
sp. (Fugu) : SINFRUT00000156433
Macaca
sp. (Macaque) : XM_001085953
Monodelphis
sp. (Opossum) : XM_001370986
Equus
sp. (Horse) : XM_001917127
Pan
sp. (Chimpanzee) : XM_518122
Canis
sp. (Dog) : XM_847462
HIX0005447
HIT000608111 (
ENST00000508164
)
(Tetraspanin-17; Tspan-17; F-box only protein 23; Tetraspan protein SB134; Transmembrane 4 superfamily member 17;)
genome : 176,074,503 - 176,086,052 (11,550)
query : 1 - 2,457 (2,457/2,457)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0005447
HIT000603341 (
ENST00000503030
)
(Tetraspanin-17; Tspan-17; F-box only protein 23; Tetraspan protein SB134; Transmembrane 4 superfamily member 17;)
genome : 176,074,503 - 176,084,619 (10,117)
query : 1 - 909 (909/909)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, nucl 1, cyto 1, mito 1, cyto_nucl 1, lyso 1,
cyto_mito 1, mito_nucl 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0005447
HIT000604407 (
ENST00000504168
)
(Tetraspanin-17 isoform c.)
genome : 176,074,506 - 176,083,957 (9,452)
query : 1 - 884 (884/884)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.6.5.3
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0005447
HIT000603356 (
ENST00000503045
)
(Tetraspanin-17; Tspan-17; F-box only protein 23; Tetraspan protein SB134; Transmembrane 4 superfamily member 17;)
genome : 176,074,562 - 176,084,733 (10,172)
query : 1 - 1,019 (1,019/1,019)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0005447
HIT000034921
(
BC010405
)
(Tetraspanin-17 isoform c.)
genome : 176,074,569 - 176,086,054 (11,486)
query : 4 - 2,364 (2,361/2,417)
9 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)3'
coverage = 0.998
EC number :
EC 3.6.5.3
InterPro :
IPR000301 : Tetraspanin
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
IPR018503 : Tetraspanin, conserved site
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0005447
HIT000615122 (
ENST00000515708
)
(Tetraspanin-17 isoform c.)
genome : 176,074,569 - 176,086,054 (11,486)
query : 1 - 2,361 (2,361/2,361)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.5.3
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0005447
HIT000072612
(
AF174603
)
(Tetraspanin-17 isoform c.)
genome : 176,074,581 - 176,079,787 (5,207)
query : 1 - 368 (368/368)
4 exons
identity = 0.984
5'(0.992;1.000;0.980;0.955)3'
coverage = 1.000
EC number :
EC 3.6.5.3
InterPro :
IPR000301 : Tetraspanin
IPR018499 : Tetraspanin/Peripherin
IPR018503 : Tetraspanin, conserved site
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0005447
HIT000607461 (
ENST00000507471
)
(Tetraspanin-17 isoform c.)
genome : 176,074,621 - 176,084,057 (9,437)
query : 1 - 707 (707/707)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.5.3
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005447)
HIX0206764
HIT000607239 (
ENST00000507236
)
(Hypothetical protein.)
genome : 176,134,357 - 176,153,244 (18,888)
query : 1 - 578 (578/578)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 7, nucl 6.5, extr_plas 6.5,
cyto_nucl 6.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206764)
HIX0184039
pHIT000010236 ( pHIT000010236 )
Representative transcript
(Hypothetical short protein.)
genome : 176,139,272 - 176,152,830 (13,559)
query : 1 - 165 (165/165)
2 exons
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0184039)
CAGE tag :
H22BB42C0802
HIX0207018
HIT000611918 (
ENST00000512245
)
(Hypothetical short protein.)
genome : 176,153,943 - 176,166,459 (12,517)
query : 1 - 553 (553/553)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 10.5, cyto 8.5, extr 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207018)
HIX0184040
pHIT000010237 ( pHIT000010237 )
Representative transcript
(Hypothetical protein.)
genome : 176,170,120 - 176,170,428 (309)
query : 1 - 309 (309/309)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0184040)
CAGE tag :
H22BB42C0802
HIX0207012
HIT000611796 (
ENST00000512115
)
(Hypothetical short protein.)
genome : 176,170,206 - 176,170,872 (667)
query : 1 - 560 (560/560)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 9, cyto_nucl 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207012)
HIX0005448
HIT000126175 (
ENST00000329542
)
(Netrin receptor UNC5A; Protein unc-5 homolog 1; Protein unc-5 homolog A; Precursor;)
genome : 176,237,478 - 176,307,896 (70,419)
query : 1 - 3,812 (3,812/3,812)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, extr_plas 11.5, plas 9, lyso 5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005448)
HIX0005448
HIT000366923 (
NM_133369
)
(Netrin receptor UNC5A; Protein unc-5 homolog 1; Protein unc-5 homolog A; Precursor;)
genome : 176,237,560 - 176,307,898 (70,339)
query : 1 - 3,732 (3,732/3,749)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, extr_plas 11.5, plas 9, lyso 5, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005448)
HIX0005448
HIT000249668
(
AK131380
)
(Netrin receptor UNC5A precursor.)
genome : 176,237,560 - 176,299,149 (61,590)
query : 1 - 2,229 (2,229/2,230)
8 exons
identity = 0.990
5'(1.000;1.000;0.995;1.000;1.000;1.000;1.000;
0.975)3'
coverage = 1.000
InterPro :
IPR000884 : Thrombospondin, type 1 repeat
IPR013098 : Immunoglobulin I-set
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005448)
HIX0005448
HIT000503379
(
BC157824
)
Representative transcript
(Netrin receptor UNC5A; Protein unc-5 homolog 1; Protein unc-5 homolog A; Precursor;)
genome : 176,237,677 - 176,307,858 (70,182)
query : 1 - 3,575 (3,575/3,575)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR000488 : Death domain
IPR000884 : Thrombospondin, type 1 repeat
IPR000906 : ZU5 domain
IPR011029 : Death-like domain
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, extr_plas 11.5, plas 9, lyso 5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005448)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AJ487852
Danio
sp. (Zebrafish) : DQ365815
Bos
sp. (Cow) : ENSBTAT00000043831
Equus
sp. (Horse) : ENSECAT00000008385
Monodelphis
sp. (Opossum) : ENSMODT00000032701
Oryzias
sp. (Medaka) : ENSORLT00000008482
Pongo
sp. (Orangutan) : ENSPPYT00000018713
Tetraodon
sp. (Tetraodon) : GSTENT00017119001
Takifugu
sp. (Fugu) : SINFRUT00000137200
Rattus
sp. (Rat) : U87305
Macaca
sp. (Macaque) : XM_001093654
Gallus
sp. (Chicken) : XM_424067
Pan
sp. (Chimpanzee) : XM_518123
Canis
sp. (Dog) : XM_860725
HIX0005448
HIT000093204
(
BC033727
)
(Netrin receptor UNC5A precursor.)
genome : 176,289,621 - 176,301,401 (11,781)
query : 11 - 1,532 (1,522/1,532)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.993
InterPro :
IPR000884 : Thrombospondin, type 1 repeat
IPR013098 : Immunoglobulin I-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, plas 6, nucl 5, mito 2, pero 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005448)
HIX0005448
HIT000613429 (
ENST00000513890
)
(Netrin receptor UNC5A precursor.)
genome : 176,289,625 - 176,301,401 (11,777)
query : 1 - 1,518 (1,518/1,518)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, plas 6, nucl 5, mito 2, pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005448)
HIX0005448
HIT000609438 (
ENST00000509580
)
(Netrin receptor UNC5A precursor.)
genome : 176,289,659 - 176,301,049 (11,391)
query : 1 - 1,031 (1,031/1,031)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7, extr 6.5, extr_plas 6, E.R. 5.5,
E.R._mito 4.83333, plas 4.5, nucl 3, mito 3, mito_pero 2.83333,
E.R._golg 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005448)
HIX0005448
HIT000108202 (
ENST00000261961
)
(Netrin receptor UNC5A precursor.)
genome : 176,292,551 - 176,307,897 (15,347)
query : 1 - 3,419 (3,419/3,419)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.5, nucl 6, plas 5, mito 2,
pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005448)
HIX0005448
HIT000087257
(
BC009333
)
(Netrin receptor UNC5A precursor.)
genome : 176,300,985 - 176,307,895 (6,911)
query : 1 - 2,635 (2,635/2,688)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000488 : Death domain
IPR000906 : ZU5 domain
IPR011029 : Death-like domain
GO :
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 15, extr 13, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005448)
HIX0005448
HIT000388450
(
BC122556
)
(Netrin receptor UNC5A precursor.)
genome : 176,301,016 - 176,307,409 (6,394)
query : 3 - 2,120 (2,118/2,120)
9 exons
identity = 0.999
5'(0.986;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000488 : Death domain
IPR000906 : ZU5 domain
IPR011029 : Death-like domain
GO :
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, E.R. 7, lyso 3, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005448)
HIX0005448
HIT000001691
(
AB075856
)
(Netrin receptor UNC5A precursor.)
genome : 176,301,403 - 176,307,897 (6,495)
query : 1 - 6,495 (6,495/6,495)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14.5, extr 5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005448)
HIX0200716
HIT000199037 (
NM_002115
)
(Hexokinase-3; EC=2.7.1.1; Hexokinase type III; HK III;)
genome : 176,307,870 - 176,326,333 (18,464)
query : 1 - 3,068 (3,068/3,080)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00521 : Streptomycin biosynthesis (18)
00524 : Butirosin and neomycin biosynthesis (2)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.5, nucl 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200716)
HIX0200716
HIT000220204
(
U51333
)
(Hexokinase-3; EC=2.7.1.1; Hexokinase type III; HK III;)
genome : 176,307,870 - 176,326,315 (18,446)
query : 1 - 3,050 (3,050/3,062)
19 exons
identity = 0.999
3'(1.000;0.996;1.000;1.000;1.000;1.000;1.000;
1.000;0.997;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00521 : Streptomycin biosynthesis (18)
00524 : Butirosin and neomycin biosynthesis (2)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001312 : Hexokinase
IPR019807 : Hexokinase, conserved site
IPR022672 : Hexokinase, N-terminal
IPR022673 : Hexokinase, C-terminal
GO :
0004396 : Molecular Function : hexokinase activity
0005524 : Molecular Function : ATP binding
0005975 : Biological Process : carbohydrate metabolic process
0006096 : Biological Process : glycolytic process
0016773 : Molecular Function : phosphotransferase activity, alcohol group as acceptor
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.5, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200716)
HIX0200716
HIT000219804
(
U42303
)
(Hexokinase-2; EC=2.7.1.1; Hexokinase type II; HK II;)
genome : 176,307,870 - 176,315,648 (7,779)
query : 3 - 1,983 (1,981/1,994)
10 exons
identity = 0.981
3'(0.983;0.983;0.994;0.967;1.000;0.990;0.983;
0.985;0.970;0.981)5'
coverage = 0.999
EC number :
EC 2.7.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00521 : Streptomycin biosynthesis (18)
00524 : Butirosin and neomycin biosynthesis (2)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001312 : Hexokinase
IPR022672 : Hexokinase, N-terminal
IPR022673 : Hexokinase, C-terminal
GO :
0005524 : Molecular Function : ATP binding
0005975 : Biological Process : carbohydrate metabolic process
0016773 : Molecular Function : phosphotransferase activity, alcohol group as acceptor
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 12.5, nucl 10, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200716)
HIX0200716
HIT000040454
(
BC028129
)
Representative transcript
(Hexokinase-3; EC=2.7.1.1; Hexokinase type III; HK III;)
genome : 176,307,872 - 176,326,333 (18,462)
query : 1 - 3,066 (3,066/3,073)
19 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 2.7.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00521 : Streptomycin biosynthesis (18)
00524 : Butirosin and neomycin biosynthesis (2)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001312 : Hexokinase
IPR019807 : Hexokinase, conserved site
IPR022672 : Hexokinase, N-terminal
IPR022673 : Hexokinase, C-terminal
GO :
0004396 : Molecular Function : hexokinase activity
0005524 : Molecular Function : ATP binding
0005975 : Biological Process : carbohydrate metabolic process
0006096 : Biological Process : glycolytic process
0016773 : Molecular Function : phosphotransferase activity, alcohol group as acceptor
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.5, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200716)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK171580
Rattus
sp. (Rat) : BC100648
Bos
sp. (Cow) : BC149752
Equus
sp. (Horse) : ENSECAT00000017859
Macaca
sp. (Macaque) : ENSMMUT00000003781
Oryzias
sp. (Medaka) : ENSORLT00000019340
Pongo
sp. (Orangutan) : ENSPPYT00000018714
Pan
sp. (Chimpanzee) : ENSPTRT00000032477
Tetraodon
sp. (Tetraodon) : GSTENT00025792001
Takifugu
sp. (Fugu) : SINFRUT00000156185
Monodelphis
sp. (Opossum) : XM_001380931
Canis
sp. (Dog) : XM_546212
HIX0200716
HIT000606874 (
ENST00000506834
)
(Hexokinase-2; EC=2.7.1.1; Hexokinase type II; HK II;)
genome : 176,307,870 - 176,315,648 (7,779)
query : 1 - 1,988 (1,988/1,988)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00521 : Streptomycin biosynthesis (18)
00524 : Butirosin and neomycin biosynthesis (2)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 13, nucl 9, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200716)
HIX0200716
HIT000113579 (
ENST00000292432
)
(Hexokinase-3; EC=2.7.1.1; Hexokinase type III; HK III;)
genome : 176,307,872 - 176,326,333 (18,462)
query : 1 - 3,066 (3,066/3,066)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00521 : Streptomycin biosynthesis (18)
00524 : Butirosin and neomycin biosynthesis (2)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.5, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200716)
HIX0200716
HIT000328886
(
AB208951
)
(Hexokinase-1; EC=2.7.1.1; Hexokinase type I; HK I; Hexokinase, tumor isozyme;)
genome : 176,307,892 - 176,326,678 (18,787)
query : 1 - 4,111 (4,111/4,111)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999;0.990;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00521 : Streptomycin biosynthesis (18)
00524 : Butirosin and neomycin biosynthesis (2)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001312 : Hexokinase
IPR019807 : Hexokinase, conserved site
IPR022672 : Hexokinase, N-terminal
IPR022673 : Hexokinase, C-terminal
GO :
0004396 : Molecular Function : hexokinase activity
0005524 : Molecular Function : ATP binding
0005975 : Biological Process : carbohydrate metabolic process
0006096 : Biological Process : glycolytic process
0016773 : Molecular Function : phosphotransferase activity, alcohol group as acceptor
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 5, cyto 4.5, cyto_nucl 4.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200716)
HIX0200716
HIT000614146 (
ENST00000514666
)
(Hexokinase-3; EC=2.7.1.1; Hexokinase type III; HK III;)
genome : 176,308,303 - 176,308,873 (571)
query : 1 - 415 (415/415)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00521 : Streptomycin biosynthesis (18)
00524 : Butirosin and neomycin biosynthesis (2)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16.3333, cyto_pero 10.3333,
nucl 8.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200716)
HIX0200716
HIT000613582 (
ENST00000514058
)
(Hexokinase-2; EC=2.7.1.1; Hexokinase type II; HK II; Muscle form hexokinase;)
genome : 176,308,957 - 176,311,135 (2,179)
query : 1 - 395 (395/395)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00521 : Streptomycin biosynthesis (18)
00524 : Butirosin and neomycin biosynthesis (2)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 9, extr 8, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200716)
HIX0200716
HIT000609566 (
ENST00000509717
)
(Hexokinase-3; EC=2.7.1.1; Hexokinase type III; HK III;)
genome : 176,314,067 - 176,318,539 (4,473)
query : 1 - 450 (450/450)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00521 : Streptomycin biosynthesis (18)
00524 : Butirosin and neomycin biosynthesis (2)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11, cyto 7.5, extr 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200716)
HIX0200716
HIT000605077 (
ENST00000504910
)
(Hexokinase-3; EC=2.7.1.1; Hexokinase type III; HK III;)
genome : 176,316,662 - 176,318,281 (1,620)
query : 4 - 547 (544/547)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.995
EC number :
EC 2.7.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00521 : Streptomycin biosynthesis (18)
00524 : Butirosin and neomycin biosynthesis (2)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200716)
HIX0163405
HIT000025663
(
AL137375
)
(Conserved hypothetical protein.)
genome : 176,332,051 - 176,370,409 (38,359)
query : 8 - 877 (870/889)
6 exons
identity = 0.983
3'(1.000;1.000;1.000;1.000;1.000;0.800)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, extr 12, cyto_nucl 11, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163405)
HIX0163405
HIT000610177 (
ENST00000510376
)
(Conserved hypothetical protein.)
genome : 176,332,194 - 176,333,177 (984)
query : 1 - 466 (466/466)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 11.5, cyto 9, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163405)
HIX0163405
HIT000605378 (
ENST00000505229
)
(Conserved hypothetical protein.)
genome : 176,332,659 - 176,334,308 (1,650)
query : 1 - 584 (584/584)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163405)
HIX0163405
HIT000603572 (
ENST00000503273
)
(Conserved hypothetical protein.)
genome : 176,335,634 - 176,395,890 (60,257)
query : 1 - 955 (955/955)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, cyto 9, mito 5, E.R._mito 4, extr 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163405)
HIX0163405
HIT000394809
(
EF077644
)
Representative transcript
(Conserved hypothetical protein.)
genome : 176,346,202 - 176,396,707 (50,506)
query : 2 - 555 (554/555)
6 exons
identity = 0.993
3'(1.000;1.000;1.000;1.000;1.000;0.964)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 11, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163405)
HIX0032264
HIT000069792
(
AF113675
)
Representative transcript
(Conserved hypothetical protein.)
genome : 176,360,549 - 176,361,808 (1,260)
query : 23 - 1,282 (1,260/1,293)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 8, mito_pero 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032264)
HIX0163405
HIT000394807
(
EF077642
)
(Conserved hypothetical protein.)
genome : 176,370,425 - 176,396,221 (25,797)
query : 1 - 677 (677/677)
6 exons
identity = 0.987
3'(0.938;1.000;1.000;1.000;0.995;0.977)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163405)
HIX0163405
HIT000609113 (
ENST00000509236
)
(Ubiquitin interacting motif conserved site containing protein.)
genome : 176,396,598 - 176,449,603 (53,006)
query : 1 - 614 (614/619)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163405)
HIX0163405
HIT000499418
(
AK304794
)
(Ubiquitin interacting motif conserved site containing protein.)
genome : 176,396,942 - 176,433,366 (36,425)
query : 1 - 1,248 (1,248/1,248)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003903 : Ubiquitin interacting motif
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 8.5, nucl 7.5, pero 4.5,
mito_pero 4.5, plas 4, mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163405)
HIX0163405
HIT000515420 (
ENST00000417486
)
(Ubiquitin interacting motif conserved site containing protein.)
genome : 176,396,942 - 176,433,366 (36,425)
query : 1 - 1,248 (1,248/1,248)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 8.5, nucl 7.5, pero 4.5,
mito_pero 4.5, plas 4, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163405)
HIX0163405
HIT000614916 (
ENST00000515488
)
(Ubiquitin interacting motif conserved site containing protein.)
genome : 176,397,691 - 176,449,634 (51,944)
query : 1 - 587 (587/587)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, extr 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163405)
HIX0163405
HIT000607502 (
ENST00000507513
)
(Conserved hypothetical protein.)
genome : 176,397,833 - 176,433,715 (35,883)
query : 1 - 425 (425/425)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11, extr 9, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163405)
HIX0163405
HIT000605982 (
ENST00000505879
)
(Conserved hypothetical protein.)
genome : 176,402,417 - 176,407,277 (4,861)
query : 1 - 221 (221/221)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163405)
HIX0163405
HIT000526316 (
ENST00000428382
)
(Conserved hypothetical protein.)
genome : 176,409,522 - 176,433,571 (24,050)
query : 1 - 249 (249/249)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 5, mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163405)
HIX0005451
HIT000492208
(
AK297584
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,697 - 176,507,555 (57,859)
query : 1 - 1,575 (1,575/1,575)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000611984 (
ENST00000512315
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,697 - 176,507,555 (57,859)
query : 1 - 1,575 (1,575/1,575)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000204054 (
NM_012279
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,697 - 176,493,744 (44,048)
query : 1 - 3,072 (3,072/3,089)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000311891 (
ENST00000358149
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,697 - 176,492,986 (43,290)
query : 1 - 2,314 (2,314/2,314)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000492072
(
AK297448
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,697 - 176,492,242 (42,546)
query : 1 - 1,276 (1,276/1,276)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003604 : Zinc finger, U1-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000606746 (
ENST00000506693
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,697 - 176,492,242 (42,546)
query : 1 - 1,276 (1,276/1,276)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000490173
(
AK295549
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,705 - 176,491,967 (42,263)
query : 1 - 1,191 (1,191/1,191)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003604 : Zinc finger, U1-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000603715 (
ENST00000503425
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,705 - 176,491,967 (42,263)
query : 1 - 1,191 (1,191/1,191)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000066569
(
AF083340
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,708 - 176,491,627 (41,920)
query : 1 - 944 (944/944)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003604 : Zinc finger, U1-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000009901
(
AK026627
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,713 - 176,492,978 (43,266)
query : 1 - 2,292 (2,292/2,369)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR003604 : Zinc finger, U1-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000494689
(
AK300065
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,717 - 176,492,459 (42,743)
query : 1 - 1,622 (1,622/1,622)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000608103 (
ENST00000508155
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,717 - 176,492,459 (42,743)
query : 1 - 1,622 (1,622/1,622)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000033438
(
BC007775
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,726 - 176,492,976 (43,251)
query : 1 - 2,281 (2,281/2,318)
7 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR003604 : Zinc finger, U1-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000108198 (
ENST00000261948
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,726 - 176,492,975 (43,250)
query : 1 - 2,349 (2,349/2,349)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000026304
(
AL359576
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,733 - 176,492,971 (43,239)
query : 1 - 2,263 (2,263/2,278)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003604 : Zinc finger, U1-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000306681
(
CR749692
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,733 - 176,492,971 (43,239)
query : 1 - 2,263 (2,263/2,278)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003604 : Zinc finger, U1-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000611528 (
ENST00000511834
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,733 - 176,492,966 (43,234)
query : 1 - 2,306 (2,306/2,306)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000249757
(
AK131469
)
Representative transcript
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,736 - 176,508,190 (58,455)
query : 1 - 2,774 (2,774/2,774)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)3'
coverage = 1.000
InterPro :
IPR003604 : Zinc finger, U1-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF083339
Danio
sp. (Zebrafish) : BC133150
Bos
sp. (Cow) : BC134498
Canis
sp. (Dog) : ENSCAFT00000026196
Equus
sp. (Horse) : ENSECAT00000009118
Macaca
sp. (Macaque) : ENSMMUT00000040627
Oryzias
sp. (Medaka) : ENSORLT00000009533
Pongo
sp. (Orangutan) : ENSPPYT00000018717
Tetraodon
sp. (Tetraodon) : GSTENT00014620001
Takifugu
sp. (Fugu) : SINFRUT00000135244
Monodelphis
sp. (Opossum) : XM_001380944
Gallus
sp. (Chicken) : XM_414475
Pan
sp. (Chimpanzee) : XM_518126
HIX0005451
HIT000603350 (
ENST00000503039
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,736 - 176,508,190 (58,455)
query : 1 - 2,774 (2,774/2,774)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000495362
(
AK300738
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,736 - 176,492,019 (42,284)
query : 1 - 977 (977/977)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000613145 (
ENST00000513587
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,449,736 - 176,492,019 (42,284)
query : 1 - 977 (977/977)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000610679 (
ENST00000510933
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,468,125 - 176,469,250 (1,126)
query : 9 - 586 (578/586)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.986
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000604800 (
ENST00000504600
)
(Zinc finger protein 346; Just another zinc finger protein;)
genome : 176,471,328 - 176,477,893 (6,566)
query : 1 - 349 (349/349)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0207162
HIT000614707 (
ENST00000515264
)
(Conserved hypothetical protein.)
genome : 176,478,715 - 176,479,964 (1,250)
query : 1 - 745 (745/745)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 10, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207162)
HIX0005451
HIT000007924
(
AK024650
)
(Conserved hypothetical protein.)
genome : 176,492,878 - 176,493,744 (867)
query : 1 - 867 (867/884)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, cyto_nucl 5.5, nucl 4.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0121317
HIT000449753
(
DQ583222
)
Representative transcript
(Non-protein coding transcript.)
genome : 176,494,575 - 176,494,604 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0121317)
HIX0005451
HIT000005566
(
AK022292
)
(Conserved hypothetical protein.)
genome : 176,505,680 - 176,508,190 (2,511)
query : 1 - 2,513 (2,513/2,513)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 5, cyto_pero 2.5, mito_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0005451
HIT000306231
(
CR627467
)
(Conserved hypothetical protein.)
genome : 176,506,512 - 176,508,189 (1,678)
query : 1 - 1,678 (1,678/1,696)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 6, cyto 4, cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005451)
HIX0200758
HIT000035489
(
BC011847
)
Representative transcript
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,513,887 - 176,525,125 (11,239)
query : 1 - 3,102 (3,102/3,175)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AF170490
Mus
sp. (Mouse) : BC033313
Rattus
sp. (Rat) : BC085772
Oryzias
sp. (Medaka) : D13553
Pongo
sp. (Orangutan) : ENSPPYT00000018718
Tetraodon
sp. (Tetraodon) : GSTENT00014622001
Takifugu
sp. (Fugu) : SINFRUT00000143771
Takifugu
sp. (Fugu) : SINFRUT00000160770
Danio
sp. (Zebrafish) : U23839
Macaca
sp. (Macaque) : XM_001087243
Monodelphis
sp. (Opossum) : XM_001380966
Equus
sp. (Horse) : XM_001498500
Pan
sp. (Chimpanzee) : XM_518127
Canis
sp. (Dog) : XM_546211
HIX0200758
HIT000113573 (
ENST00000292408
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,513,887 - 176,525,145 (11,259)
query : 1 - 3,122 (3,122/3,122)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000477087 (
ENST00000393648
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,513,906 - 176,525,023 (11,118)
query : 1 - 2,733 (2,733/2,733)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20.5, extr_plas 11, lyso 6, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000495793
(
AK301169
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,513,906 - 176,525,023 (11,118)
query : 1 - 2,733 (2,733/2,733)
18 exons
identity = 0.999
5'(1.000;1.000;0.989;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20.5, extr_plas 11, lyso 6, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000603979 (
ENST00000503708
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,513,906 - 176,518,105 (4,200)
query : 1 - 770 (770/770)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000385039
(
AK225909
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,513,915 - 176,525,143 (11,229)
query : 1 - 3,048 (3,048/3,080)
18 exons
identity = 0.997
5'(1.000;0.986;0.996;0.988;0.994;0.992;1.000;
1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)3'
coverage = 0.990
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000113574 (
ENST00000292410
)
(Fibroblast growth factor receptor 4 isoform 2 precursor.)
genome : 176,513,915 - 176,525,143 (11,229)
query : 1 - 2,928 (2,928/2,928)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20.5, extr_plas 11, lyso 6, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000384410
(
AK225280
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,513,915 - 176,524,733 (10,819)
query : 1 - 2,638 (2,638/2,638)
18 exons
identity = 0.998
5'(1.000;0.993;0.996;0.988;0.994;0.992;1.000;
1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000603228 (
ENST00000502906
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,513,915 - 176,524,733 (10,819)
query : 1 - 2,638 (2,638/2,638)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000613964 (
ENST00000514472
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,513,915 - 176,517,642 (3,728)
query : 1 - 552 (552/552)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000607687 (
ENST00000507708
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,513,917 - 176,517,564 (3,648)
query : 1 - 476 (476/476)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000610659 (
ENST00000510911
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,513,917 - 176,517,561 (3,645)
query : 1 - 709 (709/709)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 25, extr 3, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000191599
(
L03840
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,513,932 - 176,525,127 (11,196)
query : 14 - 3,029 (3,016/3,031)
18 exons
identity = 0.999
5'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.997)3'
coverage = 0.995
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000198938 (
NM_002011
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,513,921 - 176,525,125 (11,205)
query : 1 - 3,024 (3,024/3,040)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000320586 (
NM_213647
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,513,921 - 176,525,125 (11,205)
query : 1 - 3,068 (3,068/3,084)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000612761 (
ENST00000513166
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,514,420 - 176,517,623 (3,204)
query : 1 - 594 (594/594)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, extr_plas 14, plas 12, nucl 2, mito 2,
lyso 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000329566
(
AB209631
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,515,440 - 176,525,124 (9,685)
query : 1 - 5,192 (5,192/5,192)
14 exons
identity = 0.996
5'(0.992;0.997;0.992;1.000;0.999;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR008266 : Tyrosine-protein kinase, active site
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, pero 7.5, mito_pero 5, plas 4.5,
extr_plas 3.5, nucl 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000322074
(
X57205
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,560 - 176,525,127 (8,568)
query : 12 - 2,914 (2,903/2,915)
17 exons
identity = 0.998
5'(0.993;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993)3'
coverage = 0.996
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000208942 (
NM_022963
)
(Fibroblast growth factor receptor 4 isoform 2 precursor.)
genome : 176,516,551 - 176,525,125 (8,575)
query : 1 - 2,790 (2,790/2,807)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20.5, extr_plas 11, lyso 6, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000073781
(
AF202063
)
(Fibroblast growth factor receptor 4 isoform 2 precursor.)
genome : 176,516,568 - 176,524,770 (8,203)
query : 1 - 2,418 (2,418/2,418)
16 exons
identity = 0.998
5'(1.000;0.996;0.975;0.994;0.992;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20.5, extr_plas 11, lyso 6, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000477078 (
ENST00000393637
)
(Fibroblast growth factor receptor 4 isoform 2 precursor.)
genome : 176,516,568 - 176,524,770 (8,203)
query : 1 - 2,418 (2,418/2,418)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20.5, extr_plas 11, lyso 6, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000528219 (
ENST00000430285
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,577 - 176,518,105 (1,529)
query : 1 - 713 (713/713)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000558187
(
EU826602
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,577 - 176,518,105 (1,529)
query : 1 - 713 (713/713)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000078327
(
AF359241
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,599 - 176,518,097 (1,499)
query : 1 - 711 (711/711)
3 exons
identity = 0.997
5'(1.000;1.000;0.994)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR003598 : Immunoglobulin subtype 2
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000524546 (
ENST00000426612
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,599 - 176,518,097 (1,499)
query : 1 - 712 (712/712)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000715915
(
JN007471
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,604 - 176,524,677 (8,074)
query : 1 - 2,409 (2,409/2,409)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000715916
(
JN007472
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,604 - 176,524,677 (8,074)
query : 1 - 2,409 (2,409/2,409)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000715917
(
JN007473
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,604 - 176,524,677 (8,074)
query : 1 - 2,409 (2,409/2,409)
17 exons
identity = 0.999
5'(1.000;0.996;0.988;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000715918
(
JN007474
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,604 - 176,524,677 (8,074)
query : 1 - 2,409 (2,409/2,409)
17 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000715919
(
JN007475
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,604 - 176,524,677 (8,074)
query : 1 - 2,409 (2,409/2,409)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000715920
(
JN007476
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,604 - 176,524,677 (8,074)
query : 1 - 2,409 (2,409/2,409)
17 exons
identity = 0.999
5'(1.000;0.996;0.988;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000715921
(
JN007477
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,604 - 176,524,677 (8,074)
query : 1 - 2,409 (2,409/2,409)
17 exons
identity = 0.998
5'(0.989;0.996;0.988;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10, extr_plas 8.5, lyso 8, E.R. 6, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000715922
(
JN007478
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,604 - 176,524,677 (8,074)
query : 1 - 2,409 (2,409/2,409)
17 exons
identity = 0.998
5'(0.989;0.996;0.988;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10, extr_plas 8.5, lyso 8, E.R. 6, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000715923
(
JN007479
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,604 - 176,524,677 (8,074)
query : 1 - 2,409 (2,409/2,409)
17 exons
identity = 0.999
5'(1.000;0.996;0.988;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000715924
(
JN007480
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,604 - 176,524,677 (8,074)
query : 1 - 2,409 (2,409/2,409)
17 exons
identity = 0.998
5'(1.000;0.996;0.988;1.000;0.992;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000715925
(
JN007481
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,604 - 176,524,677 (8,074)
query : 1 - 2,409 (2,409/2,409)
17 exons
identity = 0.998
5'(1.000;0.996;0.988;1.000;0.992;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000715926
(
JN007482
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,516,604 - 176,524,677 (8,074)
query : 1 - 2,409 (2,409/2,409)
17 exons
identity = 0.998
5'(1.000;0.996;0.988;1.000;0.992;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10.5, extr_plas 9.5, lyso 8, extr 5.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000558188
(
EU826603
)
(Fibroblast growth factor receptor 4 isoform 2 precursor.)
genome : 176,516,604 - 176,520,069 (3,466)
query : 1 - 1,341 (1,341/1,341)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12.5, extr_plas 12, extr 10.5, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000609373 (
ENST00000509511
)
(Fibroblast growth factor receptor 4 isoform 2 precursor.)
genome : 176,516,604 - 176,520,069 (3,466)
query : 1 - 1,341 (1,341/1,341)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12.5, extr_plas 12, extr 10.5, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000078329
(
AF359246
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,517,967 - 176,525,128 (7,162)
query : 1 - 2,396 (2,396/2,396)
14 exons
identity = 0.999
5'(1.000;0.992;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR003598 : Immunoglobulin subtype 2
IPR008266 : Tyrosine-protein kinase, active site
IPR013098 : Immunoglobulin I-set
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 9, E.R. 5, plas 4.5, nucl 4.5,
pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000608088 (
ENST00000508139
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,518,779 - 176,520,497 (1,719)
query : 1 - 720 (720/720)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 9, pero 6, plas 5.5, nucl 4.5,
extr_plas 3.5, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000610815 (
ENST00000511076
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,520,176 - 176,523,180 (3,005)
query : 1 - 838 (838/838)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24.5, extr_plas 13.5, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000587743 (
ENST00000483872
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; Fibroblast growth factor receptor-like embryonic kinase; Precursor;)
genome : 176,521,826 - 176,522,580 (755)
query : 1 - 663 (663/663)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 4, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000195894
(
M59373
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,523,065 - 176,523,367 (303)
query : 1 - 195 (195/197)
2 exons
identity = 0.995
5'(1.000;0.988)3'
coverage = 0.990
EC number :
EC 2.7.10.1
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_nucl 10, cyto 8.5, nucl 6.5,
E.R._mito 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0200758
HIT000612993 (
ENST00000513423
)
(Fibroblast growth factor receptor 4; FGFR-4; EC=2.7.10.1; AltName: CD_antigen=CD334; Precursor;)
genome : 176,524,192 - 176,524,765 (574)
query : 1 - 445 (445/445)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 6.16667, nucl 4.5, cyto 4.5,
cyto_pero 4.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200758)
HIX0005453
HIT000046464
(
AK126591
)
(Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific; EC=2.1.1.43; Androgen receptor coactivator 267 kDa protein; Androgen receptor-associated protein of 267 kDa; H3-K36-HMTase; H4-K20-HMTase; Lysine N-methyltransferase 3B; Nuclear receptor-binding SET domain-containing protein 1; NR-binding SET domain-containing protein;)
genome : 176,560,026 - 176,631,306 (71,281)
query : 1 - 1,397 (1,397/1,404)
4 exons
identity = 0.987
5'(0.992;0.999;1.000;0.916)3'
coverage = 0.995
EC number :
EC 2.1.1.43
KEGG pathway :
00310 : Lysine degradation (49)
InterPro :
IPR000313 : PWWP domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000612596 (
ENST00000512992
)
(Hypothetical protein.)
genome : 176,560,026 - 176,562,427 (2,402)
query : 1 - 470 (470/470)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, extr 12, cyto_nucl 10, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000610698 (
ENST00000510954
)
(PWWP domain containing protein.)
genome : 176,560,080 - 176,631,237 (71,158)
query : 1 - 533 (533/533)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000608799 (
ENST00000508896
)
(PWWP domain containing protein.)
genome : 176,560,601 - 176,636,673 (76,073)
query : 1 - 585 (585/585)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000050758
(
BC021961
)
(Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific; EC=2.1.1.43; H3-K36-HMTase; H4-K20-HMTase; Nuclear receptor-binding SET domain-containing protein 1; NR-binding SET domain-containing protein;)
genome : 176,560,799 - 176,563,331 (2,533)
query : 1 - 1,399 (1,399/1,415)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.43
KEGG pathway :
00310 : Lysine degradation (49)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 7.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000714018 (
ENST00000602285
)
(Conserved hypothetical protein.)
genome : 176,560,799 - 176,563,331 (2,533)
query : 1 - 1,399 (1,399/1,414)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 7.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000610984 (
ENST00000511258
)
(Conserved hypothetical protein.)
genome : 176,561,174 - 176,564,405 (3,232)
query : 1 - 809 (809/809)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12, extr 8, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000013281
(
AK056667
)
(PWWP domain containing protein.)
genome : 176,562,988 - 176,662,907 (99,920)
query : 1 - 2,999 (2,999/2,999)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.988)3'
coverage = 1.000
InterPro :
IPR000313 : PWWP domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 17.8333, cyto 6.5, cyto_golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000016225
(
AK091358
)
(Conserved hypothetical protein.)
genome : 176,637,456 - 176,673,749 (36,294)
query : 1 - 2,394 (2,394/2,394)
6 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000011801
(
AK055187
)
Representative transcript
(Zinc finger, PHD-finger domain containing protein.)
genome : 176,638,471 - 176,718,983 (80,513)
query : 1 - 3,217 (3,217/3,217)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000313 : PWWP domain
IPR001214 : SET domain
IPR001965 : Zinc finger, PHD-type
IPR003616 : Post-SET domain
IPR006560 : AWS domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0008270 : Molecular Function : zinc ion binding
0018024 : Molecular Function : histone-lysine N-methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 16, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000356630 (
ENST00000375350
)
(Conserved hypothetical protein.)
genome : 176,639,112 - 176,666,866 (27,755)
query : 1 - 442 (442/442)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000009340
(
AK026066
)
(Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific; EC=2.1.1.43; Androgen receptor coactivator 267 kDa protein; Androgen receptor-associated protein of 267 kDa; H3-K36-HMTase; H4-K20-HMTase; Lysine N-methyltransferase 3B; Nuclear receptor-binding SET domain-containing protein 1; NR-binding SET domain-containing protein;)
genome : 176,683,949 - 176,722,758 (38,810)
query : 18 - 3,644 (3,627/3,660)
11 exons
identity = 0.999
5'(1.000;0.994;0.994;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;0.999)3'
coverage = 0.995
EC number :
EC 2.1.1.43
KEGG pathway :
00310 : Lysine degradation (49)
InterPro :
IPR000313 : PWWP domain
IPR001214 : SET domain
IPR001965 : Zinc finger, PHD-type
IPR003616 : Post-SET domain
IPR006560 : AWS domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019786 : Zinc finger, PHD-type, conserved site
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0008270 : Molecular Function : zinc ion binding
0018024 : Molecular Function : histone-lysine N-methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 14.5, nucl 9, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0150890
HIT000454561
(
DQ588030
)
Representative transcript
(Non-protein coding transcript.)
genome : 176,691,734 - 176,691,764 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0150890)
HIX0206392
HIT000565530 (
ENST00000460608
)
(Ribosomal protein L21e family protein.)
genome : 176,691,767 - 176,692,242 (476)
query : 1 - 476 (476/476)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 10, mito 7, cyto_pero 7, cyto_plas 7,
cyto_golg 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206392)
HIX0121493
HIT000459247
(
DQ592716
)
Representative transcript
(Non-protein coding transcript.)
genome : 176,692,146 - 176,692,175 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0121493)
HIX0005453
HIT000607987 (
ENST00000508029
)
(Zinc finger, PHD-finger domain containing protein.)
genome : 176,692,466 - 176,696,759 (4,294)
query : 1 - 561 (561/561)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0206361
HIT000453125_03
(
DQ586594
)
Representative transcript
(Non-protein coding transcript.)
genome : 176,692,721 - 176,692,750 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206361)
HIX0005453
HIT000603367 (
ENST00000503056
)
(PWWP domain containing protein.)
genome : 176,692,728 - 176,700,787 (8,060)
query : 1 - 561 (561/578)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.971
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0150756
HIT000451585
(
DQ585054
)
Representative transcript
(Non-protein coding transcript.)
genome : 176,692,849 - 176,692,879 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0150756)
HIX0150756
HIT000452489
(
DQ585958
)
(Non-protein coding transcript.)
genome : 176,692,849 - 176,692,876 (28)
query : 3 - 30 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0150756)
HIX0206384
HIT000466233
(
DQ599702
)
Representative transcript
(Non-protein coding transcript.)
genome : 176,693,042 - 176,693,071 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206384)
HIX0005453
HIT000604673 (
ENST00000504457
)
(Zinc finger, PHD-finger domain containing protein.)
genome : 176,693,338 - 176,696,685 (3,348)
query : 1 - 561 (561/561)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 12.5, cyto_nucl 6.5, cyto 4.5,
cyto_pero 4.16667, extr 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000605532 (
ENST00000505395
)
(Zinc finger, PHD-finger domain containing protein.)
genome : 176,693,381 - 176,696,672 (3,292)
query : 1 - 519 (519/519)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 12.5, cyto_nucl 9, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000615148 (
ENST00000515735
)
(PWWP domain containing protein.)
genome : 176,693,588 - 176,696,808 (3,221)
query : 1 - 506 (506/513)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.986
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, mito 6, mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000027895
(
AL832983
)
(SET domain containing protein.)
genome : 176,696,673 - 176,722,758 (26,086)
query : 1 - 3,016 (3,016/3,024)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 0.997
InterPro :
IPR000313 : PWWP domain
IPR001214 : SET domain
IPR001965 : Zinc finger, PHD-type
IPR003616 : Post-SET domain
IPR006560 : AWS domain
IPR011011 : Zinc finger, FYVE/PHD-type
GO :
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0008270 : Molecular Function : zinc ion binding
0018024 : Molecular Function : histone-lysine N-methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 9.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000009190
(
AK025916
)
(Conserved hypothetical protein.)
genome : 176,709,482 - 176,722,758 (13,277)
query : 1 - 2,481 (2,481/2,515)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 7, nucl 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000613286 (
ENST00000513736
)
(Post-SET domain containing protein.)
genome : 176,715,527 - 176,719,128 (3,602)
query : 1 - 574 (574/574)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 12, cyto_nucl 10, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0005453
HIT000066737
(
AF085858
)
(Conserved hypothetical protein.)
genome : 176,722,130 - 176,722,758 (629)
query : 11 - 639 (629/648)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 8, mito_pero 8, nucl 4, cyto_nucl 4,
extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005453)
HIX0216480
HIT000004020
(
AK001546
)
Representative transcript
(Hypothetical protein.)
genome : 176,724,685 - 176,727,213 (2,529)
query : 1 - 2,528 (2,528/2,528)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 12, cyto_nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216480)
HIX0005455
HIT000039177
(
BC021263
)
(Ras-related protein Rab-24;)
genome : 176,728,208 - 176,730,705 (2,498)
query : 1 - 1,564 (1,564/1,582)
8 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 7, nucl 7, cyto_plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000242648
(
AF087904
)
(Ras-related protein Rab-24.)
genome : 176,728,206 - 176,730,463 (2,258)
query : 1 - 1,340 (1,340/1,349)
8 exons
identity = 0.977
3'(0.964;1.000;1.000;0.980;0.971;1.000;0.957;
0.993)5'
coverage = 0.993
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, mito 6, extr 5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000212068 (
NM_130781
)
(Ras-related protein Rab-24;)
genome : 176,728,199 - 176,730,744 (2,546)
query : 1 - 1,526 (1,526/1,526)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 7, nucl 7, cyto_plas 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000365963 (
NM_001031677
)
(Ras-related protein Rab-24;)
genome : 176,728,199 - 176,730,744 (2,546)
query : 1 - 1,612 (1,612/1,612)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 7, nucl 7, cyto_plas 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000582349 (
ENST00000478234
)
(Ras-related protein Rab-24;)
genome : 176,728,199 - 176,730,734 (2,536)
query : 1 - 1,820 (1,820/1,820)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9, nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000028771
(
AL833898
)
(Ras-related protein Rab-24.)
genome : 176,728,452 - 176,730,287 (1,836)
query : 1 - 902 (902/999)
8 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000037171
(
BC015534
)
Representative transcript
(Ras-related protein Rab-24;)
genome : 176,728,452 - 176,730,707 (2,256)
query : 1 - 1,236 (1,236/1,275)
9 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 7, nucl 7, cyto_plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK007602
Danio
sp. (Zebrafish) : BC098610
Bos
sp. (Cow) : BC102183
Tetraodon
sp. (Tetraodon) : CR699148
Oryzias
sp. (Medaka) : ENSORLT00000017546
Pongo
sp. (Orangutan) : ENSPPYT00000018720
Takifugu
sp. (Fugu) : SINFRUT00000143797
Macaca
sp. (Macaque) : XM_001087473
Pan
sp. (Chimpanzee) : XM_001139937
Monodelphis
sp. (Opossum) : XM_001371011
Equus
sp. (Horse) : XM_001502424
Gallus
sp. (Chicken) : XM_425199
Canis
sp. (Dog) : XM_536420
HIX0005455
HIT000034732
(
BC010006
)
(Ras-related protein Rab-24;)
genome : 176,728,452 - 176,730,668 (2,217)
query : 1 - 1,197 (1,197/1,214)
9 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 7, nucl 7, cyto_plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000075229
(
AF258583
)
(Ras-related protein Rab-24;)
genome : 176,728,454 - 176,730,489 (2,036)
query : 1 - 1,320 (1,320/1,337)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9, nucl 7, extr_plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000477054 (
ENST00000393611
)
(Ras-related protein Rab-24;)
genome : 176,728,452 - 176,730,707 (2,256)
query : 1 - 1,236 (1,236/1,236)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 7, nucl 7, cyto_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000005035
(
AK021761
)
(Ras-related protein Rab-24.)
genome : 176,728,453 - 176,730,682 (2,230)
query : 1 - 1,608 (1,608/1,608)
6 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9, nucl 7, extr_plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000598820 (
ENST00000495458
)
(Ras-related protein Rab-24.)
genome : 176,728,453 - 176,730,682 (2,230)
query : 1 - 1,608 (1,608/1,608)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9, nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000116396 (
ENST00000303251
)
(Ras-related protein Rab-24;)
genome : 176,728,465 - 176,730,709 (2,245)
query : 1 - 1,311 (1,311/1,311)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 7, nucl 7, cyto_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000116401 (
ENST00000303270
)
(Ras-related protein Rab-24.)
genome : 176,728,487 - 176,730,711 (2,225)
query : 1 - 1,385 (1,385/1,385)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4, cyto_nucl 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000575894 (
ENST00000471466
)
(Ras-related protein Rab-24;)
genome : 176,728,504 - 176,730,706 (2,203)
query : 1 - 1,642 (1,642/1,642)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 12, extr 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000427021
(
AK308155
)
(Ras-related protein Rab-24.)
genome : 176,728,725 - 176,730,700 (1,976)
query : 1 - 1,174 (1,174/1,174)
8 exons
identity = 0.999
3'(1.000;1.000;0.997;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 8, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000100188
(
BT007268
)
(Ras-related protein Rab-24;)
genome : 176,728,746 - 176,730,289 (1,544)
query : 1 - 610 (610/612)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991)5'
coverage = 0.997
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 7, nucl 7, cyto_plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000477053 (
ENST00000393610
)
(Ras-related protein Rab-24.)
genome : 176,729,236 - 176,730,643 (1,408)
query : 1 - 870 (870/870)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, extr 11, cyto_nucl 10.5, cyto 5.5,
extr_plas 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000604617 (
ENST00000504395
)
(Ras-related protein Rab-24.)
genome : 176,730,009 - 176,730,745 (737)
query : 1 - 553 (553/563)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005455
HIT000612384 (
ENST00000512758
)
(Non-protein coding transcript.)
genome : 176,730,058 - 176,730,662 (605)
query : 1 - 519 (519/519)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005455)
HIX0005456
HIT000204225 (
NM_013237
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,763 - 176,733,960 (3,198)
query : 1 - 1,273 (1,273/1,288)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000725071 (
NM_001271828
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,763 - 176,733,960 (3,198)
query : 1 - 1,240 (1,240/1,255)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000116384 (
ENST00000303204
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,775 - 176,733,960 (3,186)
query : 1 - 1,261 (1,261/1,261)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000033107
(
BC007268
)
Representative transcript
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,800 - 176,733,950 (3,151)
query : 1 - 1,226 (1,226/1,243)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.987;0.998)3'
coverage = 1.000
InterPro :
IPR006797 : PRELI/MSF1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : AY398403
Mus
sp. (Mouse) : BC059038
Bos
sp. (Cow) : BC110001
Tetraodon
sp. (Tetraodon) : CR715120
Monodelphis
sp. (Opossum) : ENSMODT00000006038
Oryzias
sp. (Medaka) : ENSORLT00000002730
Oryzias
sp. (Medaka) : ENSORLT00000008327
Pongo
sp. (Orangutan) : ENSPPYT00000018721
Pan
sp. (Chimpanzee) : ENSPTRT00000032492
Takifugu
sp. (Fugu) : SINFRUT00000153464
Macaca
sp. (Macaque) : XM_001088735
Equus
sp. (Horse) : XM_001498441
Canis
sp. (Dog) : XM_847310
HIX0005456
HIT000089802
(
BC018904
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,800 - 176,733,950 (3,151)
query : 1 - 1,226 (1,226/1,243)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.987;0.998)3'
coverage = 1.000
InterPro :
IPR006797 : PRELI/MSF1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000611033 (
ENST00000511309
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,804 - 176,733,148 (2,345)
query : 1 - 778 (778/778)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 5.66667, nucl 5.5, cyto_pero 3.5,
extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000431036
(
AK312170
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,810 - 176,733,571 (2,762)
query : 1 - 838 (838/838)
5 exons
identity = 0.996
5'(0.993;1.000;1.000;0.987;1.000)3'
coverage = 1.000
InterPro :
IPR006797 : PRELI/MSF1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000071677
(
AF151864
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,811 - 176,733,950 (3,140)
query : 1 - 1,215 (1,215/1,217)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.987;0.998)3'
coverage = 0.998
InterPro :
IPR006797 : PRELI/MSF1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000610552 (
ENST00000510797
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,812 - 176,733,154 (2,343)
query : 1 - 712 (712/712)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 11.5, cyto 10.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000069686
(
AF111112
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,825 - 176,733,662 (2,838)
query : 13 - 924 (912/1,006)
5 exons
identity = 0.997
5'(0.996;1.000;1.000;0.987;0.996)3'
coverage = 0.987
InterPro :
IPR006797 : PRELI/MSF1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000029275
(
BC000007
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,814 - 176,733,662 (2,849)
query : 1 - 924 (924/981)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.987;0.996)3'
coverage = 1.000
InterPro :
IPR006797 : PRELI/MSF1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000034033
(
BC008866
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,814 - 176,733,668 (2,855)
query : 1 - 930 (930/949)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.987;0.996)3'
coverage = 0.999
InterPro :
IPR006797 : PRELI/MSF1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000604795_03 (
ENST00000504594
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,816 - 176,733,670 (2,855)
query : 1 - 886 (886/886)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto_nucl 4.5, nucl 4, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000001884
(
AF112203
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,822 - 176,733,950 (3,129)
query : 4 - 1,174 (1,171/1,191)
5 exons
identity = 0.997
5'(1.000;1.000;0.991;0.987;0.998)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000242614
(
AF087858
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,819 - 176,733,665 (2,847)
query : 1 - 925 (925/960)
5 exons
identity = 0.988
5'(0.970;1.000;1.000;0.987;0.992)3'
coverage = 0.999
InterPro :
IPR006797 : PRELI/MSF1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000036340
(
BC013733
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,820 - 176,733,662 (2,843)
query : 1 - 916 (916/956)
5 exons
identity = 0.996
5'(0.992;1.000;1.000;0.987;0.996)3'
coverage = 1.000
InterPro :
IPR006797 : PRELI/MSF1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000603521 (
ENST00000503216
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,822 - 176,733,950 (3,129)
query : 1 - 1,171 (1,171/1,171)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000071860
(
AF153607
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,825 - 176,733,668 (2,844)
query : 1 - 915 (915/943)
5 exons
identity = 0.992
5'(0.980;1.000;1.000;0.987;0.996)3'
coverage = 0.999
InterPro :
IPR006797 : PRELI/MSF1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000036347
(
BC013748
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,835 - 176,733,950 (3,116)
query : 1 - 1,191 (1,191/1,287)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.987;0.998)3'
coverage = 1.000
InterPro :
IPR006797 : PRELI/MSF1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000033714
(
BC008307
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,837 - 176,733,950 (3,114)
query : 1 - 1,189 (1,189/1,227)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.987;0.998)3'
coverage = 1.000
InterPro :
IPR006797 : PRELI/MSF1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000603004 (
ENST00000502670
)
(PRELI domain-containing protein 1, mitochondrial; Px19-like protein; Precursor;)
genome : 176,730,856 - 176,731,851 (996)
query : 1 - 587 (587/587)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 10, cyto_nucl 9, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000073779
(
AF201925
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,730,947 - 176,733,877 (2,931)
query : 3 - 1,008 (1,006/1,008)
5 exons
identity = 0.997
5'(1.000;1.000;0.991;0.987;0.998)3'
coverage = 0.998
InterPro :
IPR006797 : PRELI/MSF1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0005456
HIT000604117 (
ENST00000503853
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 176,731,689 - 176,733,615 (1,927)
query : 1 - 608 (608/608)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_mito 11.8333, mito_pero 10.3333,
nucl 8.5, cyto_nucl 7.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0078003
HIT000560791 (
NM_001142935
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,732,501 - 176,739,292 (6,792)
query : 1 - 2,662 (2,662/2,662)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0078003
HIT000013648
(
AK057034
)
Representative transcript
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,732,501 - 176,738,899 (6,399)
query : 1 - 2,269 (2,269/2,269)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK138742
Danio
sp. (Zebrafish) : BC055579
Bos
sp. (Cow) : BC149735
Equus
sp. (Horse) : ENSECAT00000022625
Oryzias
sp. (Medaka) : ENSORLT00000008345
Tetraodon
sp. (Tetraodon) : GSTENT00017105001
Takifugu
sp. (Fugu) : SINFRUT00000157865
Rattus
sp. (Rat) : U45986
Macaca
sp. (Macaque) : XM_001087473
Monodelphis
sp. (Opossum) : XM_001381000
Gallus
sp. (Chicken) : XM_425201
Canis
sp. (Dog) : XM_546209
HIX0078003
HIT000525842 (
ENST00000427908
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,732,501 - 176,738,899 (6,399)
query : 1 - 2,269 (2,269/2,269)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0078003
HIT000017709
(
AK092842
)
(Max dimerization protein 3 isoform b.)
genome : 176,732,501 - 176,735,063 (2,563)
query : 2 - 2,560 (2,559/2,560)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14, cyto 10.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0005456
HIT000610462 (
ENST00000510701
)
(PRELI domain-containing protein 1, mitochondrial; Px19-like protein; Precursor;)
genome : 176,732,617 - 176,733,164 (548)
query : 1 - 435 (435/435)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11.5, nucl 10.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005456)
HIX0078003
HIT000500081
(
AK316468
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,733,818 - 176,738,896 (5,079)
query : 1 - 1,534 (1,534/1,534)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 18, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0078003
HIT000521505 (
ENST00000423571
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,733,818 - 176,738,896 (5,079)
query : 1 - 1,534 (1,534/1,534)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 18, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0078003
HIT000498021
(
AK303397
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,733,884 - 176,738,899 (5,016)
query : 1 - 1,471 (1,471/1,471)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 18, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0078003
HIT000096838
(
BC041690
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,734,209 - 176,738,876 (4,668)
query : 1 - 1,855 (1,855/1,926)
4 exons
identity = 0.999
3'(0.998;1.000;1.000;0.991)5'
coverage = 0.999
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0078003
HIT000029888
(
BC000745
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,734,212 - 176,738,881 (4,670)
query : 1 - 1,048 (1,048/1,082)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0078003
HIT000028832
(
AL833959
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,734,212 - 176,738,854 (4,643)
query : 1 - 2,105 (2,105/2,139)
3 exons
identity = 1.000
3'(1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0078003
HIT000210125 (
NM_031300
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,734,206 - 176,739,292 (5,087)
query : 1 - 1,465 (1,465/1,483)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0078003
HIT000330359
(
AK222579
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,734,212 - 176,738,896 (4,685)
query : 2 - 1,064 (1,063/1,079)
6 exons
identity = 0.999
3'(1.000;0.995;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0078003
HIT000092718
(
BC032586
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,734,212 - 176,738,885 (4,674)
query : 12 - 1,140 (1,129/1,154)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.990
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 18, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0078003
HIT000242699
(
AF114834
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,734,208 - 176,738,886 (4,679)
query : 1 - 1,055 (1,055/1,058)
6 exons
identity = 0.980
3'(0.980;0.978;0.983;1.000;1.000;0.960)5'
coverage = 0.997
InterPro :
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0078003
HIT000537676 (
ENST00000439742
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,734,206 - 176,739,310 (5,105)
query : 1 - 1,483 (1,483/1,483)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0078003
HIT000604048 (
ENST00000503782
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,734,209 - 176,738,876 (4,668)
query : 1 - 1,854 (1,854/1,854)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 7.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0078003
HIT000612662 (
ENST00000513063
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,734,436 - 176,739,758 (5,323)
query : 1 - 861 (861/861)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0078003
HIT000612764 (
ENST00000513169
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,734,814 - 176,738,883 (4,070)
query : 1 - 555 (555/555)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 12, mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0078003
HIT000602876 (
ENST00000502529
)
(Max dimerization protein 3; Max dimerizer 3; Class C basic helix-loop-helix protein 13; bHLHc13; Max-associated protein 3; Max-interacting transcriptional repressor MAD3; Myx;)
genome : 176,734,883 - 176,738,897 (4,015)
query : 1 - 440 (440/440)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078003)
HIX0005458
HIT000008315
(
AK025041
)
(Hypothetical protein.)
genome : 176,743,808 - 176,758,591 (14,784)
query : 1 - 2,515 (2,515/2,532)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10.5, nucl 9, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005458)
HIX0005458
HIT000203384 (
NM_006816
)
(Legume-like lectin family protein.)
genome : 176,758,563 - 176,778,885 (20,323)
query : 1 - 1,832 (1,832/1,853)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, mito 7, E.R. 4, pero 4, plas 3.5, nucl 3,
extr_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005458)
HIX0005458
HIT000330389
(
AK222609
)
(Legume-like lectin family protein.)
genome : 176,758,563 - 176,778,652 (20,090)
query : 1 - 1,598 (1,598/1,619)
8 exons
identity = 0.999
3'(0.999;0.992;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR005052 : Legume-like lectin
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, mito 7, E.R. 4, pero 4, plas 3.5, nucl 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005458)
HIX0005458
HIT000116357 (
ENST00000303127
)
(Legume-like lectin family protein.)
genome : 176,758,563 - 176,778,853 (20,291)
query : 1 - 1,800 (1,800/1,800)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, mito 7, E.R. 4, pero 4, plas 3.5, nucl 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005458)
HIX0005458
HIT000496231
(
AK301607
)
(Legume-like lectin family protein.)
genome : 176,758,564 - 176,778,541 (19,978)
query : 29 - 1,515 (1,487/1,515)
8 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000;0.992;1.000;
0.978)5'
coverage = 0.982
InterPro :
IPR005052 : Legume-like lectin
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10, cyto 9, nucl 4, mito 3, E.R. 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005458)
HIX0005458
HIT000424896
(
AK292099
)
(Legume-like lectin family protein.)
genome : 176,758,570 - 176,778,662 (20,093)
query : 1 - 1,601 (1,601/1,601)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;0.994;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR005052 : Legume-like lectin
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9, mito 7, E.R. 4, plas 3.5, nucl 3, pero 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005458)
HIX0005458
HIT000217995
(
U10362
)
Representative transcript
(Legume-like lectin family protein.)
genome : 176,758,751 - 176,778,648 (19,898)
query : 1 - 1,407 (1,407/1,407)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR005052 : Legume-like lectin
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, mito 7, E.R. 4, pero 4, plas 3.5, nucl 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005458)
HIX0005458
HIT000037911
(
BC017263
)
(Legume-like lectin family protein.)
genome : 176,758,955 - 176,778,665 (19,711)
query : 1 - 1,220 (1,220/1,237)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR005052 : Legume-like lectin
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8, mito 7, E.R. 4, pero 4, plas 3.5, nucl 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005458)
HIX0005458
HIT000604318 (
ENST00000504071
)
(Conserved hypothetical protein.)
genome : 176,758,955 - 176,761,553 (2,599)
query : 1 - 562 (562/562)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, pero 7, cyto_mito 7, plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005458)
HIX0005458
HIT000614656 (
ENST00000515209
)
(Legume-like lectin family protein.)
genome : 176,759,032 - 176,778,648 (19,617)
query : 1 - 1,149 (1,149/1,149)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 13, nucl 12, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005458)
HIX0005458
HIT000426893
(
AK308027
)
(Legume-like lectin family protein.)
genome : 176,759,121 - 176,778,796 (19,676)
query : 1 - 1,185 (1,185/1,185)
8 exons
identity = 0.998
3'(1.000;1.000;0.991;1.000;1.000;1.000;1.000;
0.997)5'
coverage = 1.000
InterPro :
IPR005052 : Legume-like lectin
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 8, nucl 7, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005458)
HIX0005458
HIT000613951 (
ENST00000514458
)
(Legume-like lectin family protein.)
genome : 176,759,203 - 176,778,653 (19,451)
query : 1 - 616 (616/616)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, mito 8, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005458)
HIX0005458
HIT000602902 (
ENST00000502560
)
(Legume-like lectin family protein.)
genome : 176,761,310 - 176,778,660 (17,351)
query : 1 - 876 (876/876)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 13.5, nucl 11.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005458)
HIX0005458
HIT000603053 (
ENST00000502721
)
(Legume-like lectin family protein.)
genome : 176,763,912 - 176,765,545 (1,634)
query : 1 - 639 (639/639)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 14, nucl 11, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005458)
HIX0005458
HIT000613416 (
ENST00000513877
)
(Legume-like lectin family protein.)
genome : 176,764,139 - 176,778,523 (14,385)
query : 1 - 823 (823/823)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 10, cyto 10, extr 7, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005458)
HIX0005458
HIT000606380 (
ENST00000506310
)
(Legume-like lectin family protein.)
genome : 176,764,436 - 176,778,668 (14,233)
query : 1 - 564 (564/564)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14, mito 8, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005458)
HIX0206412
HIT000572909 (
ENST00000468335
)
(Ribosomal protein S10 domain containing protein.)
genome : 176,773,074 - 176,773,427 (354)
query : 1 - 354 (354/354)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 10, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206412)
HIX0005459
HIT000506963 (
ENST00000408923
)
(Regulator of G-protein signaling 14; RGS14;)
genome : 176,784,838 - 176,799,602 (14,765)
query : 1 - 2,415 (2,415/2,415)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 15.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005459)
HIX0005459
HIT000043255
(
AK123382
)
(Regulator of G-protein signaling 14; RGS14;)
genome : 176,784,844 - 176,799,597 (14,754)
query : 2 - 1,748 (1,747/1,748)
10 exons
identity = 0.990
5'(1.000;1.000;0.922;0.967;1.000;0.992;1.000;
1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR003109 : GoLoco motif
IPR003116 : Raf-like Ras-binding
IPR029071 : Ubiquitin-related domain
GO :
0005057 : Molecular Function : receptor signaling protein activity
0007165 : Biological Process : signal transduction
0030695 : Molecular Function : GTPase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 10.5, extr 7, cyto 5, mito 4.5,
E.R._mito 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005459)
HIX0005459
HIT000203076 (
NM_006480
)
(Regulator of G-protein signaling 14; RGS14;)
genome : 176,784,844 - 176,799,599 (14,756)
query : 1 - 2,406 (2,406/2,418)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 15.5, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005459)
HIX0005459
HIT000036516
(
BC014094
)
Representative transcript
(Regulator of G-protein signaling 14; RGS14;)
genome : 176,784,874 - 176,799,597 (14,724)
query : 1 - 2,374 (2,374/2,393)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR003109 : GoLoco motif
IPR003116 : Raf-like Ras-binding
IPR016137 : RGS domain
IPR024066 : RGS, subdomain 1
IPR029071 : Ubiquitin-related domain
GO :
0005057 : Molecular Function : receptor signaling protein activity
0007165 : Biological Process : signal transduction
0030695 : Molecular Function : GTPase regulator activity
0038032 : Biological Process : termination of G-protein coupled receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 15.5, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005459)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC030321
Danio
sp. (Zebrafish) : BC129245
Danio
sp. (Zebrafish) : ENSDART00000084559
Gallus
sp. (Chicken) : ENSGALT00000004915
Macaca
sp. (Macaque) : ENSMMUT00000040610
Oryzias
sp. (Medaka) : ENSORLT00000006339
Pongo
sp. (Orangutan) : ENSPPYT00000018723
Takifugu
sp. (Fugu) : SINFRUT00000158917
Rattus
sp. (Rat) : U92279
Pan
sp. (Chimpanzee) : XM_001142206
Monodelphis
sp. (Opossum) : XM_001381053
Equus
sp. (Horse) : XM_001917096
Canis
sp. (Dog) : XM_546208
Bos
sp. (Cow) : XM_611732
HIX0005459
HIT000604826 (
ENST00000504631
)
(Regulator of G-protein signaling 14; RGS14;)
genome : 176,793,429 - 176,794,558 (1,130)
query : 1 - 661 (661/661)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 2, nucl 1, cyto 1, cyto_nucl 1, lyso 1,
golg 1, E.R._mito 1, mito_pero 1, cyto_golg 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005459)
HIX0005459
HIT000063358
(
AF037195
)
(Regulator of G-protein signaling 14; RGS14;)
genome : 176,793,944 - 176,799,299 (5,356)
query : 6 - 1,531 (1,526/1,531)
11 exons
identity = 0.993
5'(1.000;1.000;0.991;1.000;0.985;1.000;1.000;
1.000;1.000;1.000;0.984)3'
coverage = 0.997
InterPro :
IPR003116 : Raf-like Ras-binding
IPR016137 : RGS domain
IPR029071 : Ubiquitin-related domain
GO :
0005057 : Molecular Function : receptor signaling protein activity
0007165 : Biological Process : signal transduction
0038032 : Biological Process : termination of G-protein coupled receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005459)
HIX0005459
HIT000063357
(
AF037194
)
(Regulator of G-protein signaling 14; RGS14;)
genome : 176,793,944 - 176,796,076 (2,133)
query : 6 - 822 (817/822)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
InterPro :
IPR003116 : Raf-like Ras-binding
IPR016137 : RGS domain
IPR029071 : Ubiquitin-related domain
GO :
0005057 : Molecular Function : receptor signaling protein activity
0007165 : Biological Process : signal transduction
0038032 : Biological Process : termination of G-protein coupled receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 16, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005459)
HIX0005459
HIT000611582 (
ENST00000511890
)
(Regulator of G-protein signaling 14; RGS14;)
genome : 176,793,944 - 176,799,299 (5,356)
query : 1 - 1,536 (1,536/1,536)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 16, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005459)
HIX0005459
HIT000614189 (
ENST00000514713
)
(Regulator of G-protein signaling 14; RGS14;)
genome : 176,793,944 - 176,796,076 (2,133)
query : 1 - 817 (817/817)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005459)
HIX0005459
HIT000603420 (
ENST00000503110
)
(Regulator of G-protein signaling 14; RGS14;)
genome : 176,794,218 - 176,795,889 (1,672)
query : 1 - 587 (587/587)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, mito_nucl 14.3333, cyto_nucl 13.3333,
mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005459)
HIX0005459
HIT000611687 (
ENST00000512000
)
(Regulator of G-protein signaling 14; RGS14;)
genome : 176,794,303 - 176,795,017 (715)
query : 1 - 559 (559/559)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005459)
HIX0005459
HIT000612139 (
ENST00000512490
)
(Regulator of G-protein signaling 14; RGS14;)
genome : 176,794,304 - 176,795,805 (1,502)
query : 1 - 565 (565/565)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005459)
HIX0005459
HIT000022984
(
AK098150
)
(Regulator of G-protein signaling 14; RGS14;)
genome : 176,794,315 - 176,799,597 (5,283)
query : 1 - 2,329 (2,329/2,329)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :