bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0005470
HIT000127879 (
ENST00000332598
)
(TMP21-related family protein.)
genome : 177,019,159 - 177,023,125 (3,967)
query : 1 - 1,473 (1,473/1,473)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 8, extr 7, mito 7, plas 5, E.R. 4, cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005470)
HIX0005470
HIT000324425
(
X90872
)
(Transmembrane emp24 domain-containing protein 9 precursor.)
genome : 177,019,229 - 177,022,503 (3,275)
query : 42 - 824 (783/824)
5 exons
identity = 0.981
5'(1.000;0.970;0.976;0.993;0.967)3'
coverage = 0.994
InterPro :
IPR009038 : GOLD
IPR015720 : TMP21-related
GO :
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, mito 8.5, pero 7, cyto_mito 5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005470)
HIX0005470
HIT000432158
(
AK313292
)
(Transmembrane emp24 domain-containing protein 9; GMP25; Glycoprotein 25L2; p24 family protein alpha-2; p24alpha2; p25; Precursor;)
genome : 177,019,204 - 177,022,417 (3,214)
query : 1 - 720 (720/720)
5 exons
identity = 0.997
5'(0.995;1.000;0.992;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009038 : GOLD
IPR015720 : TMP21-related
GO :
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 9, extr 7, mito_pero 7, plas 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005470)
HIX0005470
HIT000030153
(
BC001123
)
Representative transcript
(Transmembrane emp24 domain-containing protein 9; GMP25; Glycoprotein 25L2; p24 family protein alpha-2; p24alpha2; p25; Precursor;)
genome : 177,019,213 - 177,023,098 (3,886)
query : 1 - 1,392 (1,392/1,411)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR009038 : GOLD
IPR015720 : TMP21-related
GO :
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 8, extr 7, mito 7, plas 5, E.R. 4, cyto_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005470)
HIX0005470
HIT000206434 (
NM_017510
)
(TMP21-related family protein.)
genome : 177,019,213 - 177,023,098 (3,886)
query : 1 - 1,392 (1,392/1,402)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 8, extr 7, mito 7, plas 5, E.R. 4, cyto_pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005470)
HIX0005470
HIT000605646 (
ENST00000505521
)
(GOLD domain containing protein.)
genome : 177,019,218 - 177,021,116 (1,899)
query : 1 - 925 (925/925)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 11.5, extr 10, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005470)
HIX0005470
HIT000079722
(
AF441399
)
(Transmembrane emp24 domain-containing protein 9 precursor.)
genome : 177,019,261 - 177,023,098 (3,838)
query : 1 - 1,344 (1,344/1,378)
5 exons
identity = 0.998
5'(1.000;1.000;0.992;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR009038 : GOLD
IPR015720 : TMP21-related
GO :
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12.5, cyto_mito 7, extr 6, plas 4, pero 4,
E.R. 2, golg 2, E.R._golg 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005470)
HIX0005470
HIT000493059
(
AK298435
)
(Transmembrane emp24 domain-containing protein 9 precursor.)
genome : 177,019,273 - 177,022,421 (3,149)
query : 1 - 1,018 (1,018/1,018)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009038 : GOLD
IPR015720 : TMP21-related
GO :
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._mito 12, mito 11.5, E.R. 5.5, pero 5, cyto 4,
lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005470)
HIX0005470
HIT000607702 (
ENST00000507723
)
(TMP21-related family protein.)
genome : 177,019,273 - 177,022,421 (3,149)
query : 1 - 1,018 (1,018/1,018)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._mito 12, mito 11.5, E.R. 5.5, pero 5, cyto 4,
lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005470)
HIX0005470
HIT000613342 (
ENST00000513799
)
(TMP21-related family protein.)
genome : 177,019,489 - 177,022,578 (3,090)
query : 1 - 772 (772/772)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, cyto 5.5, cyto_mito 4.5, nucl 3, mito 2.5,
E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005470)
HIX0005470
HIT000607564 (
ENST00000507578
)
(Non-protein coding transcript.)
genome : 177,019,651 - 177,021,196 (1,546)
query : 1 - 144 (144/144)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005470)
HIX0005470
HIT000610285 (
ENST00000510499
)
(GOLD domain containing protein.)
genome : 177,020,223 - 177,022,387 (2,165)
query : 1 - 821 (821/821)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, pero 8, extr_plas 8, mito 3.5, E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005470)
HIX0005470
HIT000387353
(
BC115367
)
(TMP21-related family protein.)
genome : 177,020,670 - 177,022,613 (1,944)
query : 1 - 600 (600/608)
3 exons
identity = 0.998
5'(0.991;1.000;1.000)3'
coverage = 0.987
InterPro :
IPR009038 : GOLD
IPR015720 : TMP21-related
GO :
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9, plas 8, cyto_mito 8, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005470)
HIX0005471
HIT000102290 (
ENST00000029410
)
(Beta-1,4-galactosyltransferase family protein.)
genome : 177,027,101 - 177,037,348 (10,248)
query : 1 - 1,747 (1,747/1,747)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7.5, cyto_nucl 7.5, nucl 6.5, plas 5.5, pero 5.5,
mito_pero 5, mito 3.5, extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000203760 (
NM_007255
)
(Beta-1,4-galactosyltransferase family protein.)
genome : 177,027,119 - 177,037,345 (10,227)
query : 1 - 1,726 (1,726/1,747)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.133
KEGG pathway :
00532 : Glycosaminoglycan biosynthesis - chondroitin sulfate (12)
00534 : Glycosaminoglycan biosynthesis - heparan sulfate (11)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7.5, cyto_nucl 7.5, nucl 6.5, plas 5.5, pero 5.5,
mito_pero 5, mito 3.5, extr_plas 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000033141
(
BC007317
)
(Beta-1,4-galactosyltransferase 7; Beta-1,4-GalTase 7; Beta4Gal-T7; b4Gal-T7; EC=2.4.1.-; UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 7; UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 7; Includes: Xylosylprotein 4-beta-galactosyltransferase; EC=2.4.1.133; Proteoglycan UDP-galactose:beta-xylose beta1,4-galactosyltransferase I; UDP-galactose:beta-xylose beta-1,4-galactosyltransferase; XGPT; XGalT-1; Xylosylprotein beta-1,4-galactosyltransferase;)
genome : 177,027,119 - 177,037,275 (10,157)
query : 1 - 1,656 (1,656/1,673)
6 exons
identity = 0.999
5'(1.000;0.997;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.133
KEGG pathway :
00532 : Glycosaminoglycan biosynthesis - chondroitin sulfate (12)
00534 : Glycosaminoglycan biosynthesis - heparan sulfate (11)
01100 : Metabolic pathways (1346)
InterPro :
IPR003859 : Beta-1,4-galactosyltransferase
IPR027791 : Galactosyltransferase, C-terminal
IPR027995 : Galactosyltransferase, N-terminal
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0005975 : Biological Process : carbohydrate metabolic process
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7.5, cyto_nucl 7.5, nucl 6.5, plas 5.5, pero 5.5,
mito_pero 5, mito 3.5, extr_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000264848
(
BC072403
)
(Beta-1,4-galactosyltransferase 7; Beta-1,4-GalTase 7; Beta4Gal-T7; b4Gal-T7; EC=2.4.1.-; UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 7; UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 7; Includes: Xylosylprotein 4-beta-galactosyltransferase; EC=2.4.1.133; Proteoglycan UDP-galactose:beta-xylose beta1,4-galactosyltransferase I; UDP-galactose:beta-xylose beta-1,4-galactosyltransferase; XGPT; XGalT-1; Xylosylprotein beta-1,4-galactosyltransferase;)
genome : 177,027,130 - 177,037,275 (10,146)
query : 1 - 1,645 (1,645/1,659)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.133
KEGG pathway :
00532 : Glycosaminoglycan biosynthesis - chondroitin sulfate (12)
00534 : Glycosaminoglycan biosynthesis - heparan sulfate (11)
01100 : Metabolic pathways (1346)
InterPro :
IPR003859 : Beta-1,4-galactosyltransferase
IPR027791 : Galactosyltransferase, C-terminal
IPR027995 : Galactosyltransferase, N-terminal
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0005975 : Biological Process : carbohydrate metabolic process
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7.5, cyto_nucl 7.5, nucl 6.5, plas 5.5, pero 5.5,
mito_pero 5, mito 3.5, extr_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000602777 (
ENST00000502420
)
(Beta-1,4-galactosyltransferase family protein.)
genome : 177,027,133 - 177,035,215 (8,083)
query : 1 - 1,305 (1,305/1,305)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 11.5, nucl 10.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000252622
(
AY358578
)
(Beta-1,4-galactosyltransferase 7; Beta-1,4-GalTase 7; Beta4Gal-T7; b4Gal-T7; EC=2.4.1.-; UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 7; UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 7; Includes: Xylosylprotein 4-beta-galactosyltransferase; EC=2.4.1.133; Proteoglycan UDP-galactose:beta-xylose beta1,4-galactosyltransferase I; UDP-galactose:beta-xylose beta-1,4-galactosyltransferase; XGPT; XGalT-1; Xylosylprotein beta-1,4-galactosyltransferase;)
genome : 177,027,136 - 177,037,054 (9,919)
query : 1 - 1,418 (1,418/1,524)
6 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;0.986)3'
coverage = 0.959
EC number :
EC 2.4.1.133
KEGG pathway :
00532 : Glycosaminoglycan biosynthesis - chondroitin sulfate (12)
00534 : Glycosaminoglycan biosynthesis - heparan sulfate (11)
01100 : Metabolic pathways (1346)
InterPro :
IPR003859 : Beta-1,4-galactosyltransferase
IPR027791 : Galactosyltransferase, C-terminal
IPR027995 : Galactosyltransferase, N-terminal
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0005975 : Biological Process : carbohydrate metabolic process
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7.5, cyto_nucl 7.5, nucl 6.5, plas 5.5, pero 5.5,
mito_pero 5, mito 3.5, extr_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000260693
(
BC062983
)
(Beta-1,4-galactosyltransferase 7; Beta-1,4-GalTase 7; Beta4Gal-T7; b4Gal-T7; EC=2.4.1.-; UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 7; UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 7; Includes: Xylosylprotein 4-beta-galactosyltransferase; EC=2.4.1.133; Proteoglycan UDP-galactose:beta-xylose beta1,4-galactosyltransferase I; UDP-galactose:beta-xylose beta-1,4-galactosyltransferase; XGPT; XGalT-1; Xylosylprotein beta-1,4-galactosyltransferase;)
genome : 177,027,152 - 177,037,275 (10,124)
query : 1 - 1,623 (1,623/1,644)
6 exons
identity = 0.999
5'(1.000;0.997;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.133
KEGG pathway :
00532 : Glycosaminoglycan biosynthesis - chondroitin sulfate (12)
00534 : Glycosaminoglycan biosynthesis - heparan sulfate (11)
01100 : Metabolic pathways (1346)
InterPro :
IPR003859 : Beta-1,4-galactosyltransferase
IPR027791 : Galactosyltransferase, C-terminal
IPR027995 : Galactosyltransferase, N-terminal
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0005975 : Biological Process : carbohydrate metabolic process
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7.5, cyto_nucl 7.5, nucl 6.5, plas 5.5, pero 5.5,
mito_pero 5, mito 3.5, extr_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000605566 (
ENST00000505433
)
(Beta-1,4-galactosyltransferase family protein.)
genome : 177,027,163 - 177,036,708 (9,546)
query : 1 - 1,064 (1,064/1,064)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 7.5, mito 5.5, mito_pero 5,
nucl 4.5, plas 4, pero 3.5, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000058932
(
AB028600
)
Representative transcript
(Beta-1,4-galactosyltransferase 7; Beta-1,4-GalTase 7; Beta4Gal-T7; b4Gal-T7; EC=2.4.1.-; UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 7; UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 7; Includes: Xylosylprotein 4-beta-galactosyltransferase; EC=2.4.1.133; Proteoglycan UDP-galactose:beta-xylose beta1,4-galactosyltransferase I; UDP-galactose:beta-xylose beta-1,4-galactosyltransferase; XGPT; XGalT-1; Xylosylprotein beta-1,4-galactosyltransferase;)
genome : 177,027,172 - 177,037,331 (10,160)
query : 1 - 1,659 (1,659/1,669)
6 exons
identity = 0.999
5'(1.000;0.997;1.000;1.000;0.990;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.133
KEGG pathway :
00532 : Glycosaminoglycan biosynthesis - chondroitin sulfate (12)
00534 : Glycosaminoglycan biosynthesis - heparan sulfate (11)
01100 : Metabolic pathways (1346)
InterPro :
IPR003859 : Beta-1,4-galactosyltransferase
IPR027791 : Galactosyltransferase, C-terminal
IPR027995 : Galactosyltransferase, N-terminal
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0005975 : Biological Process : carbohydrate metabolic process
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7.5, cyto_nucl 7.5, nucl 6.5, plas 5.5, pero 5.5,
mito_pero 5, mito 3.5, extr_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000006780
(
AK023506
)
(Beta-1,4-galactosyltransferase 7; Beta-1,4-GalTase 7; Beta4Gal-T7; b4Gal-T7; EC=2.4.1.-; UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 7; UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 7; Includes: Xylosylprotein 4-beta-galactosyltransferase; EC=2.4.1.133; Proteoglycan UDP-galactose:beta-xylose beta1,4-galactosyltransferase I; UDP-galactose:beta-xylose beta-1,4-galactosyltransferase; XGPT; XGalT-1; Xylosylprotein beta-1,4-galactosyltransferase;)
genome : 177,027,176 - 177,037,330 (10,155)
query : 1 - 1,654 (1,654/1,654)
6 exons
identity = 0.998
5'(1.000;0.997;1.000;1.000;0.990;0.999)3'
coverage = 1.000
EC number :
EC 2.4.1.133
KEGG pathway :
00532 : Glycosaminoglycan biosynthesis - chondroitin sulfate (12)
00534 : Glycosaminoglycan biosynthesis - heparan sulfate (11)
01100 : Metabolic pathways (1346)
InterPro :
IPR003859 : Beta-1,4-galactosyltransferase
IPR027791 : Galactosyltransferase, C-terminal
IPR027995 : Galactosyltransferase, N-terminal
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0005975 : Biological Process : carbohydrate metabolic process
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7.5, cyto_nucl 7.5, nucl 6.5, plas 5.5, pero 5.5,
mito_pero 5, mito 3.5, extr_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000071215
(
AF142675
)
(Beta-1,4-galactosyltransferase 7; Beta-1,4-GalTase 7; Beta4Gal-T7; b4Gal-T7; EC=2.4.1.-; UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 7; UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 7; Includes: Xylosylprotein 4-beta-galactosyltransferase; EC=2.4.1.133; Proteoglycan UDP-galactose:beta-xylose beta1,4-galactosyltransferase I; UDP-galactose:beta-xylose beta-1,4-galactosyltransferase; XGPT; XGalT-1; Xylosylprotein beta-1,4-galactosyltransferase;)
genome : 177,027,177 - 177,037,345 (10,169)
query : 1 - 1,665 (1,665/1,686)
6 exons
identity = 0.996
5'(1.000;1.000;0.996;1.000;0.990;0.994)3'
coverage = 1.000
EC number :
EC 2.4.1.133
KEGG pathway :
00532 : Glycosaminoglycan biosynthesis - chondroitin sulfate (12)
00534 : Glycosaminoglycan biosynthesis - heparan sulfate (11)
01100 : Metabolic pathways (1346)
InterPro :
IPR003859 : Beta-1,4-galactosyltransferase
IPR027791 : Galactosyltransferase, C-terminal
IPR027995 : Galactosyltransferase, N-terminal
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0005975 : Biological Process : carbohydrate metabolic process
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7.5, cyto_nucl 7.5, nucl 6.5, plas 5.5, pero 5.5,
mito_pero 5, mito 3.5, extr_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000610517 (
ENST00000510761
)
(Galactosyltransferase, N-terminal domain containing protein.)
genome : 177,027,207 - 177,034,358 (7,152)
query : 1 - 552 (552/552)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 8, extr 6.5, cyto 6, mito_pero 5.83333,
extr_plas 5.5, nucl 4, plas 3.5, E.R._mito 2.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000244036
(
AJ005382
)
(Beta-1,4-galactosyltransferase 7; Beta-1,4-GalTase 7; Beta4Gal-T7; b4Gal-T7; EC=2.4.1.-; UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 7; UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 7; Includes: Xylosylprotein 4-beta-galactosyltransferase; EC=2.4.1.133; Proteoglycan UDP-galactose:beta-xylose beta1,4-galactosyltransferase I; UDP-galactose:beta-xylose beta-1,4-galactosyltransferase; XGPT; XGalT-1; Xylosylprotein beta-1,4-galactosyltransferase;)
genome : 177,027,212 - 177,036,696 (9,485)
query : 1 - 984 (984/984)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.990;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.133
KEGG pathway :
00532 : Glycosaminoglycan biosynthesis - chondroitin sulfate (12)
00534 : Glycosaminoglycan biosynthesis - heparan sulfate (11)
01100 : Metabolic pathways (1346)
InterPro :
IPR003859 : Beta-1,4-galactosyltransferase
IPR027791 : Galactosyltransferase, C-terminal
IPR027995 : Galactosyltransferase, N-terminal
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0005975 : Biological Process : carbohydrate metabolic process
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7.5, cyto_nucl 7.5, nucl 6.5, plas 5.5, pero 5.5,
mito_pero 5, mito 3.5, extr_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000605599 (
ENST00000505468
)
(Galactosyltransferase, N-terminal domain containing protein.)
genome : 177,027,231 - 177,034,339 (7,109)
query : 1 - 544 (544/544)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 8.5, cyto 7, extr_plas 6.5, mito_pero 5.16667,
E.R._mito 5, cyto_pero 5, mito 4.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000020737
(
AK095882
)
(Beta-1,4-galactosyltransferase 7; Beta-1,4-GalTase 7; Beta4Gal-T7; b4Gal-T7; EC=2.4.1.-; UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 7; UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 7; Includes: Xylosylprotein 4-beta-galactosyltransferase; EC=2.4.1.133; Proteoglycan UDP-galactose:beta-xylose beta1,4-galactosyltransferase I; UDP-galactose:beta-xylose beta-1,4-galactosyltransferase; XGPT; XGalT-1; Xylosylprotein beta-1,4-galactosyltransferase;)
genome : 177,030,059 - 177,037,274 (7,216)
query : 1 - 2,259 (2,259/2,259)
6 exons
identity = 0.995
5'(0.998;0.990;0.987;1.000;0.990;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.133
KEGG pathway :
00532 : Glycosaminoglycan biosynthesis - chondroitin sulfate (12)
00534 : Glycosaminoglycan biosynthesis - heparan sulfate (11)
01100 : Metabolic pathways (1346)
InterPro :
IPR003859 : Beta-1,4-galactosyltransferase
IPR027791 : Galactosyltransferase, C-terminal
IPR027995 : Galactosyltransferase, N-terminal
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0005975 : Biological Process : carbohydrate metabolic process
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 6, cyto 6, mito_pero 6, pero 5.5, E.R. 5,
extr_plas 5, cyto_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000607081 (
ENST00000507061
)
(Beta-1,4-galactosyltransferase family protein.)
genome : 177,031,313 - 177,032,225 (913)
query : 1 - 410 (410/410)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 12, cyto_nucl 10.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000005840
(
AK022566
)
(Beta-1,4-galactosyltransferase 7; Beta-1,4-GalTase 7; Beta4Gal-T7; b4Gal-T7; EC=2.4.1.-; UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 7; UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 7; Includes: Xylosylprotein 4-beta-galactosyltransferase; EC=2.4.1.133; Proteoglycan UDP-galactose:beta-xylose beta1,4-galactosyltransferase I; UDP-galactose:beta-xylose beta-1,4-galactosyltransferase; XGPT; XGalT-1; Xylosylprotein beta-1,4-galactosyltransferase;)
genome : 177,032,792 - 177,037,267 (4,476)
query : 3 - 2,655 (2,653/2,655)
4 exons
identity = 0.998
5'(0.998;1.000;0.990;1.000)3'
coverage = 0.999
EC number :
EC 2.4.1.133
KEGG pathway :
00532 : Glycosaminoglycan biosynthesis - chondroitin sulfate (12)
00534 : Glycosaminoglycan biosynthesis - heparan sulfate (11)
01100 : Metabolic pathways (1346)
InterPro :
IPR003859 : Beta-1,4-galactosyltransferase
IPR027791 : Galactosyltransferase, C-terminal
IPR027995 : Galactosyltransferase, N-terminal
IPR029044 : Nucleotide-diphospho-sugar transferases
GO :
0005975 : Biological Process : carbohydrate metabolic process
0016757 : Molecular Function : transferase activity, transferring glycosyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 10.5, extr 9, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000605300 (
ENST00000505145
)
(Beta-1,4-galactosyltransferase family protein.)
genome : 177,032,792 - 177,037,267 (4,476)
query : 1 - 2,653 (2,653/2,653)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 10.5, extr 9, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000042965
(
AK123092
)
(Galactosyltransferase, C-terminal domain containing protein.)
genome : 177,034,366 - 177,037,329 (2,964)
query : 1 - 2,436 (2,436/2,437)
2 exons
identity = 0.997
5'(0.996;0.999)3'
coverage = 1.000
InterPro :
IPR027791 : Galactosyltransferase, C-terminal
IPR029044 : Nucleotide-diphospho-sugar transferases
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8, cyto_nucl 7.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0005471
HIT000614792 (
ENST00000515353
)
(Galactosyltransferase, C-terminal domain containing protein.)
genome : 177,034,366 - 177,037,329 (2,964)
query : 1 - 2,439 (2,439/2,439)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8, cyto_nucl 7.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005471)
HIX0017610
HIT000602221 (
ENST00000499900
)
(Hypothetical protein.)
genome : 177,038,254 - 177,046,755 (8,502)
query : 1 - 1,751 (1,751/1,751)
3 exons
identity = 0.997
5'(0.997;0.981;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8.5, cyto_nucl 7.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017610)
HIX0024867
HIT000044007
(
AK124134
)
(Hypothetical protein.)
genome : 177,038,254 - 177,046,753 (8,500)
query : 1 - 1,749 (1,749/1,749)
3 exons
identity = 0.995
3'(0.993;0.981;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 10, cyto_nucl 9, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024867)
HIX0024867
HIT000004897
(
AK021623
)
(Conserved hypothetical protein.)
genome : 177,044,277 - 177,046,739 (2,463)
query : 2 - 2,465 (2,464/2,465)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, extr 9, cyto_nucl 9, mito 5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024867)
HIX0024867
HIT000563097 (
NR_026921
)
(SUMO-interacting motif-containing protein 1;)
genome : 177,045,501 - 177,099,278 (53,778)
query : 1 - 2,857 (2,857/2,857)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14.5, extr 5, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024867)
HIX0024867
HIT000602128 (
ENST00000499314
)
(SUMO-interacting motif-containing protein 1;)
genome : 177,046,060 - 177,058,536 (12,477)
query : 1 - 838 (838/838)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, nucl 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024867)
HIX0017610
HIT000067076
(
AF086197
)
Representative transcript
(Hypothetical protein.)
genome : 177,046,177 - 177,046,754 (578)
query : 1 - 578 (578/587)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8.5, cyto_nucl 7.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017610)
HIX0024867
HIT000492081
(
AK297457
)
Representative transcript
(SUMO-interacting motif-containing protein 1.)
genome : 177,053,083 - 177,099,278 (46,196)
query : 1 - 914 (914/914)
3 exons
identity = 0.997
3'(0.998;1.000;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14.5, cyto 10, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024867)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK028926
Rattus
sp. (Rat) : X79860
Pan
sp. (Chimpanzee) : XM_001138650
Monodelphis
sp. (Opossum) : XM_001380861
Equus
sp. (Horse) : XM_001498775
Bos
sp. (Cow) : XM_602105
HIX0024867
HIT000325805
(
Y13871
)
(SUMO-interacting motif-containing protein 1.)
genome : 177,053,360 - 177,059,702 (6,343)
query : 2 - 1,717 (1,716/1,718)
3 exons
identity = 0.998
3'(1.000;1.000;0.997)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, nucl 9, cyto 8, mito 8, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024867)
HIX0024867
HIT000602315 (
ENST00000500444
)
(SUMO-interacting motif-containing protein 1;)
genome : 177,053,437 - 177,099,150 (45,714)
query : 1 - 432 (432/432)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024867)
HIX0024867
HIT000614503 (
ENST00000515045
)
(SUMO-interacting motif-containing protein 1;)
genome : 177,059,076 - 177,099,210 (40,135)
query : 1 - 853 (853/853)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 12, cyto_nucl 11, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024867)
HIX0164479
HIT000609232 (
ENST00000509363
)
(Hypothetical short protein.)
genome : 177,109,295 - 177,140,970 (31,676)
query : 1 - 431 (431/431)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164479)
HIX0164479
HIT000448059_06
(
DQ581528
)
Representative transcript
(Non-protein coding transcript.)
genome : 177,133,765 - 177,133,793 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164479)
HIX0019692
HIT000606103 (
ENST00000506011
)
(Conserved hypothetical protein.)
genome : 177,134,982 - 177,144,253 (9,272)
query : 1 - 556 (556/556)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto_nucl 4, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000314020 (
ENST00000360669
)
(Protein FAM153A; Renal carcinoma antigen NY-REN-7;)
genome : 177,138,070 - 177,175,706 (37,637)
query : 13 - 4,499 (4,487/4,499)
26 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.964;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.985)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000000477
(
AB018295
)
Representative transcript
(Protein FAM153A; Renal carcinoma antigen NY-REN-7;)
genome : 177,138,237 - 177,175,706 (37,470)
query : 13 - 4,332 (4,320/4,332)
26 exons
identity = 0.994
3'(0.997;1.000;0.986;0.978;1.000;0.974;0.992;
0.964;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.986;0.968;0.986;1.000;1.000;1.000;
1.000;0.960;1.000;1.000;0.985)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000609463 (
ENST00000509607
)
(Centrosomal protein of 192 kDa.)
genome : 177,140,026 - 177,141,181 (1,156)
query : 17 - 443 (427/443)
3 exons
identity = 0.998
3'(1.000;1.000;0.991)5'
coverage = 0.964
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 11, nucl 9, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000614364 (
ENST00000514899
)
(Hypothetical short protein.)
genome : 177,140,070 - 177,141,153 (1,084)
query : 1 - 370 (370/370)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto_nucl 4, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0216623
HIT000686724_02 (
ENST00000574375
)
(Non-protein coding transcript.)
genome : 177,147,807 - 177,147,925 (119)
query : 1 - 119 (119/120)
1 exon
identity = 0.975
3'(0.975)5'
coverage = 0.992
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216623)
HIX0019692
HIT000610085 (
ENST00000510276
)
(Protein FAM153A; Renal carcinoma antigen NY-REN-7;)
genome : 177,149,296 - 177,210,399 (61,104)
query : 1 - 1,641 (1,641/1,641)
23 exons
identity = 0.998
3'(1.000;0.964;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000612190_01 (
ENST00000512544
)
(Hypothetical protein.)
genome : 177,149,337 - 177,150,157 (821)
query : 1 - 497 (497/497)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, extr 14, cyto_mito 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000071907
(
AF155097
)
(Protein FAM153A; Renal carcinoma antigen NY-REN-7;)
genome : 177,150,365 - 177,207,677 (57,313)
query : 1 - 1,965 (1,965/1,969)
20 exons
identity = 0.995
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.986;0.968;0.986;1.000;1.000;1.000;
1.000;0.960;1.000;1.000;1.000;0.987)5'
coverage = 0.998
InterPro :
IPR023249 : FAM153
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000215039 (
NM_173663
)
(Protein FAM153A; Renal carcinoma antigen NY-REN-7;)
genome : 177,150,365 - 177,207,505 (57,141)
query : 1 - 1,794 (1,794/1,798)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000538539 (
ENST00000440605
)
(Protein FAM153A; Renal carcinoma antigen NY-REN-7;)
genome : 177,150,365 - 177,207,677 (57,313)
query : 1 - 1,966 (1,966/1,966)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000613115 (
ENST00000513554
)
(Protein FAM153B.)
genome : 177,150,578 - 177,207,634 (57,057)
query : 1 - 1,437 (1,437/1,437)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000605656 (
ENST00000505531
)
(Protein FAM153B.)
genome : 177,151,160 - 177,209,838 (58,679)
query : 1 - 596 (596/596)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000612253 (
ENST00000512612
)
(Protein FAM153A.)
genome : 177,158,575 - 177,172,215 (13,641)
query : 1 - 553 (553/553)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, extr 13, nucl 13, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000615194 (
ENST00000515787
)
(Protein FAM153A.)
genome : 177,164,049 - 177,180,276 (16,228)
query : 1 - 576 (576/576)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.5, cyto 9.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000604110 (
ENST00000503845
)
(Conserved hypothetical protein.)
genome : 177,166,616 - 177,180,298 (13,683)
query : 1 - 563 (563/563)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000604727 (
ENST00000504518
)
(Protein FAM153A.)
genome : 177,166,636 - 177,180,297 (13,662)
query : 1 - 448 (448/448)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 12, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000605796 (
ENST00000505683
)
(Protein FAM153A.)
genome : 177,167,194 - 177,180,264 (13,071)
query : 1 - 545 (545/545)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 11, cyto 5.5, E.R._mito 5.5,
mito_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000604169 (
ENST00000503909
)
(Protein FAM153A.)
genome : 177,168,295 - 177,177,395 (9,101)
query : 1 - 469 (469/469)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000604739_02 (
ENST00000504530
)
(Protein FAM153A.)
genome : 177,171,889 - 177,210,399 (38,511)
query : 1 - 529 (529/539)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.981
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000607600 (
ENST00000507615
)
(Conserved hypothetical protein.)
genome : 177,174,455 - 177,180,264 (5,810)
query : 1 - 581 (581/581)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000606423 (
ENST00000506354
)
(Conserved hypothetical protein.)
genome : 177,174,528 - 177,180,276 (5,749)
query : 1 - 570 (570/570)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 4, cyto 2, E.R._mito 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000603845 (
ENST00000503567
)
(Conserved hypothetical protein.)
genome : 177,174,725 - 177,209,966 (35,242)
query : 1 - 558 (558/558)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000603444 (
ENST00000503136
)
(Hypothetical short protein.)
genome : 177,189,930 - 177,210,365 (20,436)
query : 1 - 719 (719/719)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0024913
HIT000048412
(
AK128539
)
Representative transcript
(Conserved hypothetical protein.)
genome : 177,194,436 - 177,199,149 (4,714)
query : 1 - 4,717 (4,717/4,717)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, plas 7, mito_nucl 7, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024913)
HIX0019692
HIT000612939_01 (
ENST00000513363
)
(Non-protein coding transcript.)
genome : 177,206,498 - 177,208,685 (2,188)
query : 1 - 377 (377/377)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000605531_01 (
ENST00000505394
)
(Non-protein coding transcript.)
genome : 177,206,502 - 177,208,685 (2,184)
query : 1 - 373 (373/373)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0019692
HIT000606305 (
ENST00000506229
)
(Non-protein coding transcript.)
genome : 177,206,557 - 177,209,814 (3,258)
query : 1 - 289 (289/289)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019692)
HIX0164337
HIT000027784_04
(
AL832872
)
Representative transcript
(Hypothetical short protein.)
genome : 177,208,289 - 177,209,620 (1,332)
query : 1 - 724 (724/741)
2 exons
identity = 0.989
3'(0.990;0.989)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 7, mito 7, cyto_nucl 6.16667,
cyto_pero 3.66667, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164337)
HIX0206517
HIT000602864 (
ENST00000502515
)
(Conserved hypothetical protein.)
genome : 177,209,198 - 177,221,397 (12,200)
query : 1 - 1,517 (1,517/1,517)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 10, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206517)
HIX0207190
HIT000615151 (
ENST00000515739
)
(Conserved hypothetical protein.)
genome : 177,228,205 - 177,230,345 (2,141)
query : 1 - 684 (684/684)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207190)
HIX0032096
HIT000614522 (
ENST00000515065
)
(WD40-repeat-containing domain containing protein.)
genome : 177,236,408 - 177,310,917 (74,510)
query : 1 - 628 (628/628)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 5, lyso 3, cyto_mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032096)
HIX0032096
HIT000606167 (
ENST00000506082
)
(WD40-repeat-containing domain containing protein.)
genome : 177,236,482 - 177,305,849 (69,368)
query : 1 - 634 (634/649)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.977
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 10.5, extr 10, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032096)
HIX0032096
HIT000610453_02 (
ENST00000510692
)
(WD40-repeat-containing domain containing protein.)
genome : 177,259,753 - 177,309,517 (49,765)
query : 1 - 551 (551/551)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, extr 10, cyto_nucl 10, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032096)
HIX0206915
HIT000610257 (
ENST00000510464
)
(Conserved hypothetical protein.)
genome : 177,263,435 - 177,264,647 (1,213)
query : 1 - 894 (894/894)
2 exons
identity = 0.992
3'(1.000;0.973)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, E.R._mito 6.33333, E.R. 6, mito 4.5, plas 4,
cyto 4, cyto_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206915)
HIX0207047
HIT000612481 (
ENST00000512861
)
(Hypothetical short protein.)
genome : 177,283,141 - 177,283,894 (754)
query : 1 - 504 (504/504)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, extr 10, mito_pero 9, mito_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207047)
HIX0164468
HIT000446850_11
(
DQ580319
)
Representative transcript
(Non-protein coding transcript.)
genome : 177,284,790 - 177,284,821 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164468)
HIX0164296
HIT000605395 (
ENST00000505248
)
(Conserved hypothetical protein.)
genome : 177,284,946 - 177,298,191 (13,246)
query : 1 - 547 (547/547)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 8, cyto 4, E.R._mito 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164296)
HIX0164296
HIT000460271_05
(
DQ593740
)
(Non-protein coding transcript.)
genome : 177,285,024 - 177,285,053 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164296)
HIX0164296
HIT000444391_05
(
DQ577860
)
Representative transcript
(Non-protein coding transcript.)
genome : 177,285,025 - 177,285,054 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164296)
HIX0164296
HIT000467218_03
(
DQ600687
)
(Non-protein coding transcript.)
genome : 177,285,030 - 177,285,059 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164296)
HIX0164296
HIT000604587_02 (
ENST00000504362
)
(Hypothetical short protein.)
genome : 177,291,394 - 177,298,195 (6,802)
query : 1 - 348 (348/348)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7.5, cyto_nucl 6.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164296)
HIX0164296
HIT000609199_02 (
ENST00000509329
)
(Hypothetical short protein.)
genome : 177,291,394 - 177,298,195 (6,802)
query : 1 - 348 (348/348)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7.5, cyto_nucl 6.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164296)
HIX0164296
HIT000604452_02 (
ENST00000504214
)
(Hypothetical short protein.)
genome : 177,291,566 - 177,298,184 (6,619)
query : 1 - 401 (401/401)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164296)
HIX0164296
HIT000611492_02 (
ENST00000511796
)
(Hypothetical short protein.)
genome : 177,291,566 - 177,298,184 (6,619)
query : 1 - 401 (401/401)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164296)
HIX0032096
HIT000486354 (
NR_003615
)
(WD40-repeat-containing domain containing protein.)
genome : 177,302,262 - 177,311,269 (9,008)
query : 1 - 1,827 (1,827/1,827)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 13, nucl 11, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032096)
HIX0032096
HIT000606728 (
ENST00000506672
)
(WD40-repeat-containing domain containing protein.)
genome : 177,302,523 - 177,311,273 (8,751)
query : 1 - 1,570 (1,570/1,570)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 13, nucl 11, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032096)
HIX0032096
HIT000116367 (
ENST00000303154
)
(WD40-repeat-containing domain containing protein.)
genome : 177,302,551 - 177,311,238 (8,688)
query : 1 - 1,505 (1,505/1,505)
6 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10.5, cyto_nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032096)
HIX0032096
HIT000612471 (
ENST00000512851
)
(WD40-repeat-containing domain containing protein.)
genome : 177,302,596 - 177,310,832 (8,237)
query : 1 - 1,056 (1,056/1,056)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, extr 9, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032096)
HIX0032096
HIT000610106_02 (
ENST00000510300
)
(WD40-repeat-containing domain containing protein.)
genome : 177,303,256 - 177,309,753 (6,498)
query : 1 - 699 (699/699)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 9.5, cyto_nucl 6, nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032096)
HIX0032096
HIT000614948_02 (
ENST00000515525
)
(WD40-repeat-containing domain containing protein.)
genome : 177,303,256 - 177,309,506 (6,251)
query : 1 - 573 (573/573)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032096)
HIX0032096
HIT000602940 (
ENST00000502601
)
(WD40-repeat-containing domain containing protein.)
genome : 177,305,532 - 177,309,532 (4,001)
query : 1 - 481 (481/490)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9.5, cyto_nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032096)
HIX0032096
HIT000610813_02 (
ENST00000511074
)
(WD40-repeat-containing domain containing protein.)
genome : 177,305,791 - 177,310,702 (4,912)
query : 1 - 478 (478/478)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11.5, cyto_nucl 8.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032096)
HIX0032096
HIT000604934 (
ENST00000504756
)
(WD40-repeat-containing domain containing protein.)
genome : 177,309,392 - 177,310,001 (610)
query : 1 - 489 (489/489)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 10.5, nucl 10, cyto_pero 8.5,
extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032096)
HIX0032096
HIT000312149 (
ENST00000358442
)
(WD40-repeat-containing domain containing protein.)
genome : 177,309,444 - 177,348,388 (38,945)
query : 1 - 515 (515/515)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032096)
HIX0032096
HIT000614117 (
ENST00000514635
)
(Conserved hypothetical protein.)
genome : 177,309,687 - 177,344,268 (34,582)
query : 1 - 250 (250/250)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13.5, extr 8, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032096)
HIX0206558
HIT000603737 (
ENST00000503449
)
(Non-protein coding transcript.)
genome : 177,312,261 - 177,359,278 (47,018)
query : 1 - 568 (568/568)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206558)
HIX0005434
HIT000005330
(
AK022056
)
Representative transcript
(Conserved hypothetical protein.)
genome : 177,316,932 - 177,319,556 (2,625)
query : 1 - 2,624 (2,624/2,624)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, mito_nucl 10.8333, cyto_nucl 9.66667,
extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005434)
HIX0206987
HIT000611354 (
ENST00000511650
)
(Hypothetical protein.)
genome : 177,366,623 - 177,410,055 (43,433)
query : 1 - 547 (547/547)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, mito 11, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206987)
HIX0216290
HIT000046489
(
AK126616
)
Representative transcript
(Conserved hypothetical protein.)
genome : 177,376,757 - 177,384,937 (8,181)
query : 1 - 2,562 (2,562/2,716)
4 exons
identity = 0.966
5'(0.967;0.992;0.981;0.922)3'
coverage = 0.943
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216290)
HIX0216290
HIT000602863 (
ENST00000502514
)
(Hypothetical short protein.)
genome : 177,377,336 - 177,384,751 (7,416)
query : 1 - 613 (613/613)
3 exons
identity = 0.989
5'(1.000;0.988;0.972)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 6, cyto 3, E.R._mito 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216290)
HIX0216290
HIT000607091 (
ENST00000507072
)
(Hypothetical protein.)
genome : 177,378,414 - 177,390,961 (12,548)
query : 1 - 551 (551/551)
4 exons
identity = 0.987
5'(1.000;0.988;0.944;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 12, cyto_nucl 3.66667, cyto 3.5,
cyto_pero 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216290)
HIX0216290
HIT000603562 (
ENST00000503263
)
(Conserved hypothetical protein.)
genome : 177,380,166 - 177,384,760 (4,595)
query : 1 - 279 (279/279)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 6, cyto 3, E.R._mito 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216290)
HIX0216290
HIT000347469 (
ENST00000366189
)
(Conserved hypothetical protein.)
genome : 177,384,609 - 177,387,150 (2,542)
query : 9 - 511 (503/511)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.984
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 6, cyto 3.5, mito_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216290)
HIX0184041
HIT000605937 (
ENST00000505831
)
(Sds3-like family protein.)
genome : 177,398,317 - 177,399,282 (966)
query : 1 - 966 (966/966)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 9, mito_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0184041)
HIX0184041
pHIT000010324 ( pHIT000010324 )
Representative transcript
(Conserved hypothetical protein.)
genome : 177,398,317 - 177,399,282 (966)
query : 1 - 966 (966/966)
1 exon
InterPro :
IPR013907 : Sds3-like
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0184041)
CAGE tag :
H08BA01C2106
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC062176
Tetraodon
sp. (Tetraodon) : CR635614
Oryzias
sp. (Medaka) : ENSORLT00000001422
Takifugu
sp. (Fugu) : SINFRUT00000157065
Macaca
sp. (Macaque) : XR_011319
HIX0031962
HIT000066180
(
AF076215
)
Representative transcript
(Homeobox protein prophet of Pit-1; PROP-1; Pituitary-specific homeodomain factor;)
genome : 177,419,236 - 177,423,243 (4,008)
query : 1 - 1,463 (1,463/1,463)
3 exons
identity = 0.998
3'(0.998;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR000047 : Helix-turn-helix motif
IPR017970 : Homeobox, conserved site
GO :
0000976 : Molecular Function : transcription regulatory region sequence-specific DNA binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031962)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB037922
Bos
sp. (Cow) : AF453510
Pongo
sp. (Orangutan) : ENSPPYT00000018736
Canis
sp. (Dog) : NM_001020807
Mus
sp. (Mouse) : U77946
Macaca
sp. (Macaque) : XM_001096271
Danio
sp. (Zebrafish) : XM_001341349
Monodelphis
sp. (Opossum) : XM_001371224
Equus
sp. (Horse) : XM_001501626
Pan
sp. (Chimpanzee) : XM_527140
HIX0031962
HIT000117934 (
ENST00000308304
)
(Homeobox protein prophet of Pit-1; PROP-1; Pituitary-specific homeodomain factor;)
genome : 177,419,236 - 177,423,243 (4,008)
query : 1 - 1,464 (1,464/1,464)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031962)
HIX0031962
HIT000202867 (
NM_006261
)
(Homeobox protein prophet of Pit-1; PROP-1; Pituitary-specific homeodomain factor;)
genome : 177,419,236 - 177,423,243 (4,008)
query : 1 - 1,464 (1,464/1,464)
3 exons
identity = 0.999
3'(1.000;1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031962)
HIX0031962
HIT000263248
(
BC069076
)
(Homeobox protein prophet of Pit-1; PROP-1; Pituitary-specific homeodomain factor;)
genome : 177,419,709 - 177,422,934 (3,226)
query : 1 - 682 (682/683)
3 exons
identity = 0.999
3'(1.000;1.000;0.991)5'
coverage = 0.999
InterPro :
IPR000047 : Helix-turn-helix motif
IPR017970 : Homeobox, conserved site
GO :
0000976 : Molecular Function : transcription regulatory region sequence-specific DNA binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031962)
HIX0032419
HIT000094717
(
BC036933
)
Representative transcript
(Hypothetical protein.)
genome : 177,431,776 - 177,434,059 (2,284)
query : 1 - 2,312 (2,312/2,356)
1 exon
identity = 0.982
3'(0.982)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 13, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032419)
HIX0057489
HIT000604739_03 (
ENST00000504530
)
(Protein FAM153A.)
genome : 177,433,406 - 177,465,918 (32,513)
query : 1 - 529 (529/539)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.981
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000605701 (
ENST00000505582
)
(Conserved hypothetical protein.)
genome : 177,433,839 - 177,463,082 (29,244)
query : 1 - 558 (558/558)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000660285 (
NR_038353
)
(Protein FAM153B.)
genome : 177,433,967 - 177,476,088 (42,122)
query : 1 - 1,077 (1,077/1,077)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000489386
(
AK294762
)
(Protein FAM153B.)
genome : 177,433,973 - 177,476,088 (42,116)
query : 1 - 1,071 (1,071/1,071)
12 exons
identity = 0.996
5'(0.978;1.000;1.000;1.000;1.000;1.000;0.972;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR023249 : FAM153
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 6, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000607820 (
ENST00000507848
)
(Protein FAM153B.)
genome : 177,433,973 - 177,476,088 (42,116)
query : 1 - 1,071 (1,071/1,071)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000608746 (
ENST00000508839
)
(Non-protein coding transcript.)
genome : 177,433,991 - 177,437,275 (3,285)
query : 1 - 289 (289/289)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000612939_02 (
ENST00000513363
)
(Non-protein coding transcript.)
genome : 177,435,154 - 177,437,334 (2,181)
query : 1 - 377 (377/377)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000605531_02 (
ENST00000505394
)
(Non-protein coding transcript.)
genome : 177,435,154 - 177,437,330 (2,177)
query : 1 - 373 (373/373)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000481333 (
ENST00000398106
)
(Protein FAM153B.)
genome : 177,435,986 - 177,474,656 (38,671)
query : 1 - 1,510 (1,510/1,510)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000503140
(
BC146883
)
(Protein FAM153B.)
genome : 177,435,986 - 177,474,282 (38,297)
query : 1 - 1,136 (1,136/1,136)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR023249 : FAM153
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000503145
(
BC146888
)
(Protein FAM153B.)
genome : 177,435,986 - 177,474,282 (38,297)
query : 1 - 1,136 (1,136/1,136)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR023249 : FAM153
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000503541
(
BC171810
)
(Protein FAM153B.)
genome : 177,435,986 - 177,474,282 (38,297)
query : 1 - 1,049 (1,049/1,049)
10 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR023249 : FAM153
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000336722
(
BC101339
)
Representative transcript
(Protein FAM153A.)
genome : 177,436,198 - 177,474,656 (38,459)
query : 1 - 1,435 (1,435/1,435)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR023249 : FAM153
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000336723
(
BC101340
)
(Protein FAM153B.)
genome : 177,436,198 - 177,474,656 (38,459)
query : 1 - 1,210 (1,210/1,210)
10 exons
identity = 0.998
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR023249 : FAM153
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000336724
(
BC101341
)
(Protein FAM153B.)
genome : 177,436,198 - 177,474,656 (38,459)
query : 1 - 1,298 (1,298/1,298)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR023249 : FAM153
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000390639
(
BC131737
)
(Protein FAM153B.)
genome : 177,436,198 - 177,474,656 (38,459)
query : 1 - 1,210 (1,210/1,210)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR023249 : FAM153
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000336721
(
BC101338
)
(Protein FAM153B.)
genome : 177,436,198 - 177,474,652 (38,455)
query : 1 - 1,294 (1,294/1,294)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
InterPro :
IPR023249 : FAM153
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000607405_02 (
ENST00000507409
)
(Hypothetical short protein.)
genome : 177,436,327 - 177,463,439 (27,113)
query : 1 - 542 (542/542)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, extr 12, cyto_nucl 10, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0094804
HIT000389878
(
BC128513
)
Representative transcript
(Hypothetical protein.)
genome : 177,446,415 - 177,446,907 (493)
query : 3 - 493 (491/493)
1 exon
identity = 0.988
5'(0.988)3'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0094804)
HIX0057489
HIT000611549 (
ENST00000511856
)
(Protein FAM153B.)
genome : 177,457,525 - 177,473,896 (16,372)
query : 1 - 597 (597/597)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 13, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000610920 (
ENST00000511189
)
(Protein FAM153B.)
genome : 177,457,537 - 177,476,000 (18,464)
query : 1 - 926 (926/926)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 10, cyto 5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000612190_02 (
ENST00000512544
)
(Hypothetical protein.)
genome : 177,475,079 - 177,475,899 (821)
query : 1 - 497 (497/497)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, extr 14, cyto_mito 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000611226 (
ENST00000511511
)
(Centrosomal protein of 192 kDa.)
genome : 177,475,777 - 177,481,134 (5,358)
query : 1 - 1,098 (1,098/1,098)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16.5, extr 13, mito_pero 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0216624
HIT000686724_03 (
ENST00000574375
)
(Non-protein coding transcript.)
genome : 177,477,304 - 177,477,422 (119)
query : 1 - 119 (119/120)
1 exon
identity = 0.975
5'(0.975)3'
coverage = 0.992
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216624)
HIX0024853
HIT000042997
(
AK123124
)
Representative transcript
(Conserved hypothetical protein.)
genome : 177,477,481 - 177,479,328 (1,848)
query : 1 - 1,847 (1,847/1,847)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8.5, cyto_nucl 5.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024853)
HIX0057489
HIT000611513_01 (
ENST00000511819
)
(Centrosomal protein of 192 kDa.)
genome : 177,479,420 - 177,481,780 (2,361)
query : 1 - 632 (632/632)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16.5, extr 13, mito_pero 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000606180 (
ENST00000506096
)
(Centrosomal protein of 192 kDa.)
genome : 177,479,627 - 177,482,560 (2,934)
query : 1 - 457 (457/457)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 11, mito 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0057489
HIT000615282 (
ENST00000515878
)
(Conserved hypothetical protein.)
genome : 177,480,873 - 177,482,560 (1,688)
query : 1 - 385 (385/385)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.5, cyto 9.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057489)
HIX0183502
HIT000691303_01 (
ENST00000579374
)
(Ribosomal protein L19/L19e domain containing protein.)
genome : 177,482,577 - 177,483,269 (693)
query : 2 - 685 (684/690)
1 exon
identity = 0.964
5'(0.964)3'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0183502)
HIX0183502
HIT000059733_03
(
AB055766
)
Representative transcript
(Non-protein coding transcript.)
genome : 177,482,577 - 177,482,609 (33)
query : 1 - 33 (33/34)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.971
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0183502)
HIX0183502
HIT000582087_01 (
ENST00000477964
)
(Ribosomal protein L19/L19e domain containing protein.)
genome : 177,482,605 - 177,483,195 (591)
query : 1 - 591 (591/591)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.5, cyto 10.5, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0183502)
HIX0018030
HIT000007031
(
AK023757
)
Representative transcript
(Conserved hypothetical protein.)
genome : 177,492,362 - 177,495,160 (2,799)
query : 2 - 2,797 (2,796/2,797)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10, cyto_nucl 9.66667, nucl 7,
cyto_pero 6.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018030)
HIX0005472
HIT000111187 (
ENST00000274605
)
(NEDD4-binding protein 3; N4BP3;)
genome : 177,540,444 - 177,553,088 (12,645)
query : 1 - 6,080 (6,080/6,080)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13, cyto 10.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005472)
HIX0005472
HIT000366864 (
NM_015111
)
(NEDD4-binding protein 3; N4BP3;)
genome : 177,540,556 - 177,553,107 (12,552)
query : 1 - 5,987 (5,987/5,987)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13, cyto 10.5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005472)
HIX0005472
HIT000053873
(
BC053323
)
Representative transcript
(NEDD4-binding protein 3; N4BP3;)
genome : 177,540,556 - 177,549,402 (8,847)
query : 1 - 2,282 (2,282/2,307)
5 exons
identity = 0.999
5'(1.000;1.000;0.996;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13, cyto 10.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005472)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC055831
Rattus
sp. (Rat) : DQ176639
Equus
sp. (Horse) : ENSECAT00000009470
Gallus
sp. (Chicken) : ENSGALT00000022741
Oryzias
sp. (Medaka) : ENSORLT00000004858
Pongo
sp. (Orangutan) : ENSPPYT00000018738
Tetraodon
sp. (Tetraodon) : GSTENT00017132001
Takifugu
sp. (Fugu) : SINFRUT00000174165
Macaca
sp. (Macaque) : XM_001093839
Pan
sp. (Chimpanzee) : XM_001146257
Monodelphis
sp. (Opossum) : XM_001381069
Canis
sp. (Dog) : XM_538567
Bos
sp. (Cow) : XM_590649
HIX0005472
HIT000000047
(
AB002339
)
(NEDD4-binding protein 3; N4BP3;)
genome : 177,546,577 - 177,553,080 (6,504)
query : 1 - 5,721 (5,721/5,721)
4 exons
identity = 0.998
5'(0.997;0.998;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, cyto 10, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005472)
HIX0005472
HIT000047097
(
AK127224
)
(NEDD4-binding protein 3.)
genome : 177,548,097 - 177,552,586 (4,490)
query : 1 - 4,490 (4,490/4,490)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, cyto_nucl 11, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005472)
HIX0005472
HIT000490287
(
AK295663
)
(NEDD4-binding protein 3.)
genome : 177,548,132 - 177,549,481 (1,350)
query : 1 - 1,229 (1,229/1,229)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 11.5, nucl 10.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005472)
HIX0005472
HIT000091371
(
BC027715
)
(Hypothetical short protein.)
genome : 177,551,796 - 177,552,587 (792)
query : 1 - 792 (792/806)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005472)
HIX0005473
HIT000614552 (
ENST00000515098
)
(Protein RMD5 homolog B;)
genome : 177,557,997 - 177,577,566 (19,570)
query : 1 - 4,066 (4,066/4,066)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 6.5, mito 2, E.R. 2,
E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000119722 (
ENST00000313386
)
(Protein RMD5 homolog B;)
genome : 177,557,997 - 177,575,569 (17,573)
query : 1 - 1,929 (1,929/1,929)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 6.5, mito 2, E.R. 2,
E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000018348
(
AK093481
)
(Protein RMD5 homolog B;)
genome : 177,558,012 - 177,575,550 (17,539)
query : 1 - 1,886 (1,886/1,886)
11 exons
identity = 0.997
5'(1.000;1.000;0.972;0.993;1.000;0.990;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006594 : LIS1 homology motif
IPR006595 : CTLH, C-terminal LisH motif
IPR013144 : CRA domain
IPR024964 : CTLH/CRA C-terminal to LisH motif domain
IPR027370 : RING-type zinc-finger, LisH dimerisation motif
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.5, nucl 11, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000018922
(
AK094065
)
(Protein RMD5 homolog B;)
genome : 177,558,012 - 177,575,550 (17,539)
query : 1 - 2,092 (2,092/2,092)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;0.998;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR006594 : LIS1 homology motif
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 13, extr 9, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000607562 (
ENST00000507575
)
(Protein RMD5 homolog B;)
genome : 177,558,012 - 177,575,550 (17,539)
query : 1 - 2,092 (2,092/2,092)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 13, extr 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000641143 (
ENST00000542098
)
(Protein RMD5 homolog B;)
genome : 177,558,012 - 177,575,550 (17,539)
query : 1 - 1,884 (1,884/1,884)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15, nucl 11.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000045210
(
AK125337
)
Representative transcript
(Protein RMD5 homolog B;)
genome : 177,558,015 - 177,577,566 (19,552)
query : 1 - 4,047 (4,047/4,047)
12 exons
identity = 0.999
5'(1.000;1.000;0.986;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR006594 : LIS1 homology motif
IPR006595 : CTLH, C-terminal LisH motif
IPR013144 : CRA domain
IPR024964 : CTLH/CRA C-terminal to LisH motif domain
IPR027370 : RING-type zinc-finger, LisH dimerisation motif
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 6.5, mito 2, E.R. 2,
E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK075599
Danio
sp. (Zebrafish) : BC059606
Rattus
sp. (Rat) : BC093386
Bos
sp. (Cow) : BC120327
Monodelphis
sp. (Opossum) : ENSMODT00000032605
Oryzias
sp. (Medaka) : ENSORLT00000008793
Pongo
sp. (Orangutan) : ENSPPYT00000018739
Tetraodon
sp. (Tetraodon) : GSTENT00017131001
Takifugu
sp. (Fugu) : SINFRUT00000137246
Macaca
sp. (Macaque) : XM_001095477
Pan
sp. (Chimpanzee) : XM_001147539
Equus
sp. (Horse) : XM_001502097
Canis
sp. (Dog) : XM_531873
HIX0005473
HIT000603140 (
ENST00000502814
)
(Protein RMD5 homolog B;)
genome : 177,558,015 - 177,569,909 (11,895)
query : 1 - 653 (653/653)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9, nucl 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000612300 (
ENST00000512663
)
(Protein RMD5 homolog B;)
genome : 177,558,018 - 177,569,977 (11,960)
query : 1 - 738 (738/738)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000607447 (
ENST00000507457
)
(Protein RMD5 homolog B;)
genome : 177,558,026 - 177,569,994 (11,969)
query : 1 - 791 (791/808)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.979
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, extr 11, cyto 10.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000034663
(
BC009911
)
(Protein RMD5 homolog B;)
genome : 177,558,028 - 177,575,479 (17,452)
query : 1 - 1,808 (1,808/1,825)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006594 : LIS1 homology motif
IPR006595 : CTLH, C-terminal LisH motif
IPR013144 : CRA domain
IPR024964 : CTLH/CRA C-terminal to LisH motif domain
IPR027370 : RING-type zinc-finger, LisH dimerisation motif
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 6.5, mito 2, E.R. 2,
E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000208845 (
NM_022762
)
(Protein RMD5 homolog B;)
genome : 177,558,028 - 177,575,479 (17,452)
query : 1 - 1,808 (1,808/1,825)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 6.5, mito 2, E.R. 2,
E.R._mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000343516
(
DQ494789
)
(Protein RMD5 homolog B;)
genome : 177,558,028 - 177,575,479 (17,452)
query : 1 - 1,808 (1,808/1,825)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006594 : LIS1 homology motif
IPR006595 : CTLH, C-terminal LisH motif
IPR013144 : CRA domain
IPR024964 : CTLH/CRA C-terminal to LisH motif domain
IPR027370 : RING-type zinc-finger, LisH dimerisation motif
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 6.5, mito 2, E.R. 2,
E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000608566 (
ENST00000508647
)
(Protein RMD5 homolog B;)
genome : 177,558,236 - 177,569,614 (11,379)
query : 19 - 562 (544/562)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.968
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000026595
(
AL713670
)
(Protein RMD5 homolog B;)
genome : 177,558,281 - 177,575,551 (17,271)
query : 1 - 1,809 (1,809/1,819)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006594 : LIS1 homology motif
IPR006595 : CTLH, C-terminal LisH motif
IPR013144 : CRA domain
IPR024964 : CTLH/CRA C-terminal to LisH motif domain
IPR027370 : RING-type zinc-finger, LisH dimerisation motif
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 6.5, mito 2, E.R. 2,
E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000612433 (
ENST00000512811
)
(Protein RMD5 homolog B;)
genome : 177,565,109 - 177,570,710 (5,602)
query : 1 - 471 (471/471)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000253136
(
AY359092
)
(Protein RMD5 homolog B;)
genome : 177,568,341 - 177,575,567 (7,227)
query : 1 - 2,820 (2,820/2,823)
8 exons
identity = 1.000
5'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR006594 : LIS1 homology motif
IPR006595 : CTLH, C-terminal LisH motif
IPR013144 : CRA domain
IPR024964 : CTLH/CRA C-terminal to LisH motif domain
IPR027370 : RING-type zinc-finger, LisH dimerisation motif
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, cyto_mito 12.6667, cyto_pero 4.33333,
nucl 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000614799 (
ENST00000515360
)
(Protein RMD5 homolog B;)
genome : 177,568,341 - 177,575,567 (7,227)
query : 1 - 2,820 (2,820/2,820)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, cyto_mito 12.6667, cyto_pero 4.33333,
nucl 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000042565
(
AK122692
)
(Protein RMD5 homolog B;)
genome : 177,568,673 - 177,576,992 (8,320)
query : 1 - 4,250 (4,250/4,250)
6 exons
identity = 1.000
5'(0.999;0.998;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006594 : LIS1 homology motif
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 4, cyto 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000612757 (
ENST00000513162
)
(Protein RMD5 homolog B;)
genome : 177,568,673 - 177,576,992 (8,320)
query : 1 - 4,250 (4,250/4,250)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 4, cyto 3, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000009245
(
AK025971
)
(Protein RMD5 homolog B;)
genome : 177,569,654 - 177,575,560 (5,907)
query : 1 - 1,500 (1,500/1,518)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR006594 : LIS1 homology motif
IPR006595 : CTLH, C-terminal LisH motif
IPR013144 : CRA domain
IPR024964 : CTLH/CRA C-terminal to LisH motif domain
IPR027370 : RING-type zinc-finger, LisH dimerisation motif
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 16.5, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000025669
(
AL137381
)
(Protein RMD5 homolog B;)
genome : 177,571,057 - 177,575,551 (4,495)
query : 1 - 1,059 (1,059/1,071)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013144 : CRA domain
IPR024964 : CTLH/CRA C-terminal to LisH motif domain
IPR027370 : RING-type zinc-finger, LisH dimerisation motif
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, extr 9, mito_pero 9, cyto 5.5,
cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000018489
(
AK093622
)
(Protein RMD5 homolog B;)
genome : 177,572,971 - 177,575,541 (2,571)
query : 1 - 2,393 (2,393/2,393)
3 exons
identity = 0.998
5'(0.998;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR027370 : RING-type zinc-finger, LisH dimerisation motif
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000607901 (
ENST00000507937
)
(Protein RMD5 homolog B;)
genome : 177,572,971 - 177,575,541 (2,571)
query : 1 - 2,393 (2,393/2,393)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005473
HIT000463629
(
DQ597098
)
(Non-protein coding transcript.)
genome : 177,573,204 - 177,573,233 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005473)
HIX0005474
HIT000002961
(
AK000486
)
(H/ACA ribonucleoprotein complex subunit 2; Nucleolar protein family A member 2; snoRNP protein NHP2;)
genome : 177,576,467 - 177,580,867 (4,401)
query : 1 - 758 (758/842)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, nucl 3, mito 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005474)
HIX0005474
HIT000029277
(
BC000009
)
(H/ACA ribonucleoprotein complex subunit 2; Nucleolar protein family A member 2; snoRNP protein NHP2;)
genome : 177,576,467 - 177,580,869 (4,403)
query : 1 - 760 (760/805)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002415 : H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote
IPR004038 : Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR018492 : Ribosomal protein L7Ae/L8/Nhp2 family
IPR029064 : 50S ribosomal protein L30e-like
GO :
0003723 : Molecular Function : RNA binding
0005730 : Cellular Component : nucleolus
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, nucl 3, mito 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005474)
HIX0005474
HIT000072134
(
AF161404
)
(H/ACA ribonucleoprotein complex subunit 2; Nucleolar protein family A member 2; snoRNP protein NHP2;)
genome : 177,576,467 - 177,580,872 (4,406)
query : 1 - 761 (761/784)
4 exons
identity = 0.995
3'(0.992;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR002415 : H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote
IPR004038 : Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR018492 : Ribosomal protein L7Ae/L8/Nhp2 family
IPR029064 : 50S ribosomal protein L30e-like
GO :
0003723 : Molecular Function : RNA binding
0005730 : Cellular Component : nucleolus
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, nucl 3, mito 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005474)
HIX0005474
HIT000032800
(
BC006387
)
Representative transcript
(H/ACA ribonucleoprotein complex subunit 2; Nucleolar protein family A member 2; snoRNP protein NHP2;)
genome : 177,576,467 - 177,580,895 (4,429)
query : 1 - 786 (786/807)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002415 : H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote
IPR004038 : Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR018492 : Ribosomal protein L7Ae/L8/Nhp2 family
IPR029064 : 50S ribosomal protein L30e-like
GO :
0003723 : Molecular Function : RNA binding
0005730 : Cellular Component : nucleolus
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, nucl 3, mito 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005474)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK019134
Danio
sp. (Zebrafish) : BC059569
Bos
sp. (Cow) : BC103161
Gallus
sp. (Chicken) : CR353787
Tetraodon
sp. (Tetraodon) : CR717215
Pongo
sp. (Orangutan) : CR858415
Canis
sp. (Dog) : ENSCAFT00000000376
Equus
sp. (Horse) : ENSECAT00000024585
Oryzias
sp. (Medaka) : ENSORLT00000000891
Rattus
sp. (Rat) : XM_001071992
Macaca
sp. (Macaque) : XM_001095587
Pan
sp. (Chimpanzee) : XM_001148113
Monodelphis
sp. (Opossum) : XM_001371133
HIX0005474
HIT000206700 (
NM_017838
)
(H/ACA ribonucleoprotein complex subunit 2; Nucleolar protein family A member 2; snoRNP protein NHP2;)
genome : 177,576,467 - 177,580,961 (4,495)
query : 1 - 852 (852/867)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, nucl 3, mito 3, mito_nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005474)
HIX0005474
HIT000366220 (
NM_001034833
)
(H/ACA ribonucleoprotein complex subunit 2; Nucleolar protein family A member 2; snoRNP protein NHP2;)
genome : 177,576,467 - 177,580,961 (4,495)
query : 1 - 746 (746/761)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005474)
HIX0005474
HIT000246615
(
AJ293309
)
(H/ACA ribonucleoprotein complex subunit 2; Nucleolar protein family A member 2; snoRNP protein NHP2;)
genome : 177,576,467 - 177,580,884 (4,418)
query : 2 - 776 (775/791)
4 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR002415 : H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote
IPR004038 : Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR018492 : Ribosomal protein L7Ae/L8/Nhp2 family
IPR029064 : 50S ribosomal protein L30e-like
GO :
0003723 : Molecular Function : RNA binding
0005730 : Cellular Component : nucleolus
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, nucl 3, mito 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005474)
HIX0005474
HIT000079102
(
AF401217
)
(Hypothetical short protein.)
genome : 177,576,467 - 177,576,767 (301)
query : 1 - 301 (301/313)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 10, cyto 3.5, cyto_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005474)
HIX0005474
HIT000111188 (
ENST00000274606
)
(H/ACA ribonucleoprotein complex subunit 2; Nucleolar protein family A member 2; snoRNP protein NHP2;)
genome : 177,576,461 - 177,580,968 (4,508)
query : 1 - 865 (865/865)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005474)
HIX0005474
HIT000120131_01 (
ENST00000314397
)
(H/ACA ribonucleoprotein complex subunit 2; Nucleolar protein family A member 2; snoRNP protein NHP2;)
genome : 177,576,483 - 177,580,830 (4,348)
query : 1 - 599 (599/599)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005474)
HIX0005474
HIT000079104
(
AF401219
)
(H/ACA ribonucleoprotein complex subunit 2; Nucleolar protein family A member 2; snoRNP protein NHP2;)
genome : 177,576,486 - 177,580,819 (4,334)
query : 1 - 691 (691/691)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002415 : H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote
IPR004038 : Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR018492 : Ribosomal protein L7Ae/L8/Nhp2 family
IPR029064 : 50S ribosomal protein L30e-like
GO :
0003723 : Molecular Function : RNA binding
0005730 : Cellular Component : nucleolus
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, nucl 3, mito 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005474)
HIX0005474
HIT000268088
(
CR457238
)
(H/ACA ribonucleoprotein complex subunit 2; Nucleolar protein family A member 2; snoRNP protein NHP2;)
genome : 177,576,718 - 177,580,818 (4,101)
query : 1 - 458 (458/462)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.991
InterPro :
IPR002415 : H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote
IPR004038 : Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR018492 : Ribosomal protein L7Ae/L8/Nhp2 family
IPR029064 : 50S ribosomal protein L30e-like
GO :
0003723 : Molecular Function : RNA binding
0005730 : Cellular Component : nucleolus
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, nucl 3, mito 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005474)
HIX0005474
HIT000602628 (
ENST00000502263
)
(H/ACA ribonucleoprotein complex subunit 2; Nucleolar protein family A member 2; snoRNP protein NHP2;)
genome : 177,577,532 - 177,580,580 (3,049)
query : 1 - 552 (552/552)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 10.5, mito 9, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005474)
HIX0005474
HIT000613859 (
ENST00000514354
)
(H/ACA ribonucleoprotein complex subunit 2 isoform b.)
genome : 177,577,640 - 177,580,883 (3,244)
query : 1 - 472 (472/472)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, pero 10, mito_pero 7.5, mito 3, nucl 2,
extr 1.5, extr_plas 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005474)
HIX0005474
HIT000610817 (
ENST00000511078
)
(H/ACA ribonucleoprotein complex subunit 2; Nucleolar protein family A member 2; snoRNP protein NHP2;)
genome : 177,577,827 - 177,580,895 (3,069)
query : 1 - 475 (475/475)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, extr 5, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005474)
HIX0005474
HIT000610167 (
ENST00000510363
)
(H/ACA ribonucleoprotein complex subunit 2; Nucleolar protein family A member 2; snoRNP protein NHP2;)
genome : 177,580,223 - 177,580,885 (663)
query : 1 - 566 (566/566)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 10, extr 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005474)
HIX0207048
HIT000612510 (
ENST00000512891
)
(Conserved hypothetical protein.)
genome : 177,592,703 - 177,593,563 (861)
query : 1 - 861 (861/861)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 8, cyto 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207048)
HIX0005475
HIT000039755
(
BC024185
)
(Putative germ cell-less protein-like 1-like;)
genome : 177,611,510 - 177,614,422 (2,913)
query : 6 - 2,919 (2,914/2,957)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 0.998
InterPro :
IPR000210 : BTB/POZ-like
IPR011333 : BTB/POZ fold
IPR013069 : BTB/POZ
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 7, plas 5, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005475)
HIX0005475
HIT000042015
(
BC033886
)
Representative transcript
(Putative germ cell-less protein-like 1-like;)
genome : 177,611,504 - 177,614,433 (2,930)
query : 1 - 2,930 (2,930/2,945)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR011333 : BTB/POZ fold
IPR013069 : BTB/POZ
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 7, plas 5, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005475)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168490
Oryzias
sp. (Medaka) : AF355473
Pongo
sp. (Orangutan) : ENSPPYT00000018741
Takifugu
sp. (Fugu) : SINFRUT00000159828
Pan
sp. (Chimpanzee) : XM_001148182
Equus
sp. (Horse) : XR_044503
HIX0005475
HIT000039754
(
BC024184
)
(Putative germ cell-less protein-like 1-like;)
genome : 177,611,504 - 177,614,418 (2,915)
query : 2 - 2,917 (2,916/2,931)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR011333 : BTB/POZ fold
IPR013069 : BTB/POZ
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 6, plas 5, E.R. 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005475)
HIX0005475
HIT000398522 (
NR_003281
)
(Putative germ cell-less protein-like 1-like;)
genome : 177,611,511 - 177,614,433 (2,923)
query : 1 - 2,923 (2,923/2,923)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 7, plas 5, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005475)
HIX0005475
HIT000073704
(
AF198534
)
(Germ cell-less protein-like 1;)
genome : 177,612,371 - 177,613,882 (1,512)
query : 2 - 1,509 (1,508/1,526)
1 exon
identity = 0.984
3'(0.984)5'
coverage = 0.988
InterPro :
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
IPR013069 : BTB/POZ
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 14, cyto 8, extr_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005475)
HIX0005475
HIT000434567
(
AK315701
)
(Putative germ cell-less protein-like 1-like;)
genome : 177,612,720 - 177,614,403 (1,684)
query : 1 - 1,684 (1,684/1,684)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR011333 : BTB/POZ fold
IPR013069 : BTB/POZ
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 7, plas 5, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005475)
HIX0005475
HIT000568233 (
ENST00000463439
)
(Putative germ cell-less protein-like 1-like;)
genome : 177,612,720 - 177,614,300 (1,581)
query : 1 - 1,581 (1,581/1,581)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 7, plas 5, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005475)
HIX0005476
pHIT000103997 ( pHIT000103997 )
(Conserved hypothetical protein.)
genome : 177,614,088 - 177,632,656 (18,569)
query : 1 - 327 (327/327)
2 exons
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
CAGE tag :
T05F0A93EE11
HIX0005476
HIT000022511
(
AK097657
)
Representative transcript
(Heterogeneous nuclear ribonucleoprotein A/B isoform a.)
genome : 177,631,508 - 177,638,162 (6,655)
query : 2 - 1,795 (1,794/1,795)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171138
Rattus
sp. (Rat) : AJ238854
Mus
sp. (Mouse) : AK013709
Danio
sp. (Zebrafish) : BC055525
Bos
sp. (Cow) : BC102923
Tetraodon
sp. (Tetraodon) : CR707758
Equus
sp. (Horse) : ENSECAT00000019498
Gallus
sp. (Chicken) : ENSGALT00000023234
Oryzias
sp. (Medaka) : ENSORLT00000006717
Pongo
sp. (Orangutan) : ENSPPYT00000018742
Takifugu
sp. (Fugu) : SINFRUT00000164671
Takifugu
sp. (Fugu) : SINFRUT00000180765
Monodelphis
sp. (Opossum) : XM_001381084
Pan
sp. (Chimpanzee) : XM_518142
Canis
sp. (Dog) : XM_844317
HIX0005476
HIT000201245 (
NM_004499
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform b.)
genome : 177,631,508 - 177,638,184 (6,677)
query : 1 - 1,675 (1,675/1,696)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000210092 (
NM_031266
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform a.)
genome : 177,631,508 - 177,638,184 (6,677)
query : 1 - 1,816 (1,816/1,837)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000312066 (
ENST00000358344
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform a.)
genome : 177,631,508 - 177,638,164 (6,657)
query : 1 - 1,796 (1,796/1,796)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000331205
(
AK223425
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform a.)
genome : 177,631,535 - 177,638,163 (6,629)
query : 5 - 1,772 (1,768/1,791)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
0.997)3'
coverage = 0.998
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000011214
(
AK054600
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform b.)
genome : 177,631,534 - 177,638,163 (6,630)
query : 1 - 1,702 (1,702/1,702)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000606408 (
ENST00000506339
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform a.)
genome : 177,631,534 - 177,638,156 (6,623)
query : 1 - 1,747 (1,747/1,747)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000309921 (
ENST00000355836
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform b.)
genome : 177,631,540 - 177,638,143 (6,604)
query : 1 - 1,602 (1,602/1,602)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000032025
(
BC004561
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform b.)
genome : 177,631,541 - 177,638,163 (6,623)
query : 1 - 1,621 (1,621/1,638)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000614115 (
ENST00000514633
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform b.)
genome : 177,631,542 - 177,638,120 (6,579)
query : 1 - 1,571 (1,571/1,571)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000034306
(
BC009359
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform b.)
genome : 177,631,545 - 177,638,163 (6,619)
query : 1 - 1,617 (1,617/1,643)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000614640 (
ENST00000515193
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform b.)
genome : 177,631,545 - 177,638,156 (6,612)
query : 1 - 1,595 (1,595/1,595)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000030518
(
BC001616
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform b.)
genome : 177,631,549 - 177,638,163 (6,615)
query : 1 - 1,613 (1,613/1,631)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000031044
(
BC002625
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform b.)
genome : 177,631,549 - 177,638,163 (6,615)
query : 1 - 1,613 (1,613/1,631)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000088735
(
BC015556
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform b.)
genome : 177,631,549 - 177,638,163 (6,615)
query : 1 - 1,614 (1,614/1,632)
7 exons
identity = 0.999
5'(1.000;1.000;0.994;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000606332 (
ENST00000506259
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform b.)
genome : 177,631,549 - 177,638,150 (6,602)
query : 1 - 1,674 (1,674/1,674)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000605065 (
ENST00000504898
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform a.)
genome : 177,631,572 - 177,638,143 (6,572)
query : 1 - 1,785 (1,785/1,785)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000051777
(
BC036708
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform a.)
genome : 177,631,582 - 177,638,182 (6,601)
query : 1 - 1,740 (1,740/1,811)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000196157
(
M65028
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform b.)
genome : 177,631,611 - 177,638,162 (6,552)
query : 1 - 1,536 (1,536/1,537)
7 exons
identity = 0.973
5'(0.859;0.952;1.000;0.975;1.000;1.000;0.987)3'
coverage = 0.999
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000221320
(
U76713
)
(Heterogeneous nuclear ribonucleoprotein A/B; hnRNP A/B; APOBEC1-binding protein 1; ABBP-1;)
genome : 177,631,824 - 177,638,182 (6,359)
query : 1 - 1,570 (1,570/1,584)
7 exons
identity = 0.988
5'(0.969;1.000;0.975;1.000;1.000;1.000;0.987)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000604972 (
ENST00000504796
)
(Heterogeneous nuclear ribonucleoprotein A/B isoform b.)
genome : 177,632,569 - 177,633,867 (1,299)
query : 1 - 578 (578/578)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0005476
HIT000327152
(
Z36844
)
(Heterogeneous nuclear ribonucleoprotein A/B; hnRNP A/B; APOBEC1-binding protein 1; ABBP-1;)
genome : 177,634,134 - 177,637,709 (3,576)
query : 2 - 368 (367/368)
3 exons
identity = 0.995
5'(1.000;1.000;0.987)3'
coverage = 0.997
InterPro :
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 12, extr 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
HIX0216212
HIT000006744
(
AK023470
)
Representative transcript
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,635,500 - 177,653,080 (17,581)
query : 1 - 2,025 (2,025/2,025)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.989;1.000)5'
coverage = 1.000
InterPro :
IPR005814 : Aminotransferase class-III
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0008483 : Molecular Function : transaminase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10.5, mito 6, nucl 3.5, extr 3,
pero 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216212)
HIX0216212
HIT000585407 (
ENST00000481436
)
(Aminotransferase class-III family protein.)
genome : 177,635,500 - 177,653,080 (17,581)
query : 1 - 2,025 (2,025/2,025)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10.5, mito 6, nucl 3.5, extr 3,
pero 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216212)
HIX0216212
HIT000476935 (
ENST00000393488
)
(Aminotransferase class-III family protein.)
genome : 177,635,624 - 177,649,477 (13,854)
query : 1 - 1,001 (1,001/1,001)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.8333, cyto_pero 10.8333, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216212)
HIX0216212
HIT000018604
(
AK093737
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,637,969 - 177,652,011 (14,043)
query : 1 - 2,251 (2,251/2,251)
7 exons
identity = 0.998
3'(0.998;1.000;1.000;0.994;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR005814 : Aminotransferase class-III
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0008483 : Molecular Function : transaminase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10, mito 7, nucl 4.5,
mito_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216212)
HIX0216212
HIT000580679 (
ENST00000476487
)
(Aminotransferase class-III family protein.)
genome : 177,637,969 - 177,652,011 (14,043)
query : 1 - 2,251 (2,251/2,251)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10, mito 7, nucl 4.5,
mito_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216212)
HIX0216212
HIT000606135 (
ENST00000506045
)
(Aminotransferase class-III family protein.)
genome : 177,638,891 - 177,649,935 (11,045)
query : 1 - 731 (731/731)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12, nucl 4, pero 4, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216212)
HIX0216212
HIT000604340 (
ENST00000504096
)
(Conserved hypothetical protein.)
genome : 177,650,389 - 177,651,497 (1,109)
query : 1 - 607 (607/607)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216212)
HIX0164247
HIT000249631
(
AK131343
)
Representative transcript
(Conserved hypothetical protein.)
genome : 177,653,097 - 177,655,369 (2,273)
query : 1 - 2,270 (2,270/2,270)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164247)
HIX0164247
HIT000611416 (
ENST00000511716
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,653,467 - 177,659,542 (6,076)
query : 1 - 562 (562/562)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 6.5, cyto_nucl 5.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164247)
HIX0164247
HIT000580380 (
ENST00000476170
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,655,126 - 177,659,572 (4,447)
query : 1 - 824 (824/824)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13, cyto_nucl 9.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164247)
HIX0164247
HIT000007350
(
AK024076
)
(Conserved hypothetical protein.)
genome : 177,657,542 - 177,659,615 (2,074)
query : 1 - 2,075 (2,075/2,075)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, nucl 9.5, extr 9, cyto 9,
cyto_pero 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164247)
HIX0164247
HIT000266216
(
BC088800
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,657,938 - 177,659,791 (1,854)
query : 1 - 1,843 (1,843/1,860)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 12.5, extr 9, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164247)
HIX0164247
HIT000015264
(
AK090397
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,657,939 - 177,659,167 (1,229)
query : 1 - 1,229 (1,229/1,229)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 13, extr 7, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164247)
HIX0200749
HIT000052691
(
BC042428
)
(Collagen alpha-1(XXIII) chain;)
genome : 177,664,621 - 177,989,743 (325,123)
query : 1 - 2,841 (2,841/2,938)
29 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.911;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR008160 : Collagen triple helix repeat
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 8.5, mito_pero 8.5, cyto_nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200749)
HIX0200749
HIT000025749
(
AL137461
)
(Collagen alpha-1(V) chain; Precursor;)
genome : 177,664,621 - 177,677,105 (12,485)
query : 1 - 1,686 (1,686/1,740)
12 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.984;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR008160 : Collagen triple helix repeat
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200749)
HIX0200749
HIT000214853 (
NM_173465
)
(Collagen alpha-1(XXIII) chain;)
genome : 177,664,617 - 178,017,556 (352,940)
query : 1 - 3,063 (3,063/3,080)
28 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.911;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18.5, extr_plas 10, cyto 6.5, cyto_mito 4,
nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200749)
HIX0200749
HIT000084851
(
AY158895
)
Representative transcript
(Collagen alpha-1(XXIII) chain;)
genome : 177,664,619 - 178,017,556 (352,938)
query : 1 - 3,060 (3,060/3,067)
28 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.911;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR008160 : Collagen triple helix repeat
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18.5, extr_plas 10, cyto 6.5, cyto_mito 4,
nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200749)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF410792
Rattus
sp. (Rat) : AY158896
Oryzias
sp. (Medaka) : ENSORLT00000014130
Pongo
sp. (Orangutan) : ENSPPYT00000018744
Macaca
sp. (Macaque) : XM_001097974
Monodelphis
sp. (Opossum) : XM_001381099
Equus
sp. (Horse) : XM_001498232
Gallus
sp. (Chicken) : XM_414689
Danio
sp. (Zebrafish) : XM_690666
Canis
sp. (Dog) : XM_844285
Bos
sp. (Cow) : XM_864013
Pan
sp. (Chimpanzee) : XR_023202
HIX0200749
HIT000332531
(
AY898961
)
(Collagen alpha-1(XXIII) chain;)
genome : 177,664,619 - 178,017,556 (352,938)
query : 1 - 3,060 (3,060/3,067)
28 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.911;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR008160 : Collagen triple helix repeat
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18.5, extr_plas 10, cyto 6.5, cyto_mito 4,
nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200749)
HIX0200749
HIT000397337 (
ENST00000390654
)
(Collagen alpha-1(XXIII) chain;)
genome : 177,664,619 - 178,017,556 (352,938)
query : 1 - 3,061 (3,061/3,061)
28 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.911;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18.5, extr_plas 10, cyto 6.5, cyto_mito 4,
nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200749)
HIX0200749
HIT000506032 (
ENST00000407622
)
(Collagen alpha-1(II) chain; Alpha-1 type II collagen; Precursor;)
genome : 177,681,975 - 177,989,239 (307,265)
query : 1 - 930 (930/930)
15 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.911;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 6.5, cyto_nucl 5.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200749)
HIX0207304
HIT000621114 (
ENST00000521803
)
(Hypothetical short protein.)
genome : 177,777,868 - 177,779,251 (1,384)
query : 1 - 666 (666/666)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 12.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207304)
HIX0032557
HIT000602550 (
ENST00000501834
)
(Conserved hypothetical protein.)
genome : 177,865,682 - 177,870,095 (4,414)
query : 1 - 1,458 (1,458/1,458)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 7, cyto_nucl 6.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032557)
HIX0024939
HIT000049666
(
AK130395
)
Representative transcript
(Conserved hypothetical protein.)
genome : 177,932,269 - 177,933,938 (1,670)
query : 1 - 1,670 (1,670/1,670)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 10, nucl 8.5, extr_plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024939)
HIX0206346
HIT000448150_06
(
DQ581619
)
Representative transcript
(Non-protein coding transcript.)
genome : 177,945,200 - 177,945,229 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206346)
HIX0206249
HIT000711254_06 (
ENST00000599499
)
(Hypothetical protein.)
genome : 177,945,795 - 177,945,971 (177)
query : 1 - 177 (177/177)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206249)
HIX0206249
HIT000663536_07 (
ENST00000549699
)
(Hypothetical protein.)
genome : 177,945,795 - 177,945,941 (147)
query : 1 - 147 (147/147)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206249)
HIX0206249
HIT000694782_09 (
ENST00000582896
)
(Hypothetical protein.)
genome : 177,945,795 - 177,945,939 (145)
query : 1 - 145 (145/145)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 16, cyto 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206249)
HIX0206249
HIT000682410_06 (
ENST00000569468
)
(Hypothetical protein.)
genome : 177,945,796 - 177,945,971 (176)
query : 1 - 176 (176/176)
1 exon
identity = 0.977
3'(0.977)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206249)
HIX0206249
HIT000620948_07 (
ENST00000521633
)
(Hypothetical protein.)
genome : 177,945,797 - 177,945,941 (145)
query : 1 - 145 (145/145)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 10, cyto_nucl 9.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206249)
HIX0206249
HIT000661149_06 (
ENST00000546955
)
(Hypothetical protein.)
genome : 177,945,798 - 177,945,972 (175)
query : 1 - 175 (175/175)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206249)
HIX0206249
HIT000607854_05 (
ENST00000507884
)
(Hypothetical protein.)
genome : 177,945,798 - 177,945,971 (174)
query : 1 - 174 (174/174)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206249)
HIX0206249
HIT000698430_06 (
ENST00000586584
)
(Hypothetical protein.)
genome : 177,945,798 - 177,945,971 (174)
query : 1 - 174 (174/174)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206249)
HIX0206249
HIT000619815_07 (
ENST00000520478
)
(Hypothetical protein.)
genome : 177,945,798 - 177,945,942 (145)
query : 1 - 145 (145/145)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206249)
HIX0206249
HIT000619722_08 (
ENST00000520383
)
(Hypothetical protein.)
genome : 177,945,798 - 177,945,941 (144)
query : 1 - 144 (144/144)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206249)
HIX0206249
HIT000709973_05 (
ENST00000598203
)
(Hypothetical protein.)
genome : 177,945,800 - 177,945,971 (172)
query : 1 - 171 (171/171)
1 exon
identity = 0.965
3'(0.965)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206249)
HIX0200749
HIT000588586 (
ENST00000484750
)
(Hypothetical short protein.)
genome : 177,950,506 - 177,989,727 (39,222)
query : 1 - 568 (568/568)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 12, cyto_mito 10, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200749)
HIX0216309
HIT000055970
(
BX647323
)
Representative transcript
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,030,271 - 178,044,389 (14,119)
query : 1 - 3,129 (3,129/3,147)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
InterPro :
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 7.5, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216309)
HIX0216309
HIT000618495 (
ENST00000519132
)
(Serine/threonine-protein kinase, active site containing protein.)
genome : 178,030,271 - 178,044,389 (14,119)
query : 1 - 3,129 (3,129/3,129)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 7.5, cysk 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216309)
HIX0216309
HIT000098329
(
BC046211
)
(Conserved hypothetical protein.)
genome : 178,030,630 - 178,031,823 (1,194)
query : 1 - 1,193 (1,193/1,208)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 11, nucl 6, cyto_pero 6, cyto_plas 6,
cyto_golg 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216309)
HIX0216309
HIT000622037 (
ENST00000522749
)
(Conserved hypothetical protein.)
genome : 178,043,883 - 178,047,120 (3,238)
query : 1 - 572 (572/572)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216309)
HIX0216309
HIT000489466
(
AK294842
)
(Conserved hypothetical protein.)
genome : 178,046,292 - 178,047,743 (1,452)
query : 1 - 1,443 (1,443/1,443)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 10, extr_plas 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216309)
HIX0216309
HIT000616058 (
ENST00000516655
)
(Conserved hypothetical protein.)
genome : 178,046,729 - 178,046,999 (271)
query : 1 - 271 (271/271)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216309)
HIX0216309
HIT000427540
(
AK308674
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,047,136 - 178,054,113 (6,978)
query : 1 - 867 (867/867)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216309)
HIX0216309
HIT000427745
(
AK308879
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,047,140 - 178,054,083 (6,944)
query : 1 - 900 (900/900)
4 exons
identity = 0.999
3'(1.000;0.985;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 10, mito_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216309)
HIX0216309
HIT000427444
(
AK308578
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,047,171 - 178,054,087 (6,917)
query : 1 - 864 (864/864)
4 exons
identity = 0.987
3'(0.978;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 10, mito_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216309)
HIX0216309
HIT000428081
(
AK309215
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,047,172 - 178,054,083 (6,912)
query : 1 - 859 (859/859)
4 exons
identity = 0.986
3'(0.976;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 10, mito_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216309)
HIX0216309
HIT000262013
(
BC065732
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,048,814 - 178,054,031 (5,218)
query : 5 - 1,693 (1,689/1,724)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 0.996
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 10, mito_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216309)
HIX0216309
HIT000622297 (
ENST00000523013
)
(Conserved hypothetical protein.)
genome : 178,048,810 - 178,050,340 (1,531)
query : 1 - 735 (735/735)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 10, nucl 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216309)
HIX0216309
HIT000620280 (
ENST00000520957
)
(Conserved hypothetical protein.)
genome : 178,048,813 - 178,054,031 (5,219)
query : 1 - 1,690 (1,690/1,690)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 10, mito_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216309)
HIX0200799
HIT000348283 (
ENST00000367003
)
(Conserved hypothetical protein.)
genome : 178,107,232 - 178,366,360 (259,129)
query : 1 - 358 (358/358)
2 exons
identity = 0.992
5'(1.000;0.988)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200799)
HIX0024796
HIT000202325 (
NM_005649
)
(Zinc finger protein 354A; Transcription factor 17; TCF-17; Zinc finger protein eZNF;)
genome : 178,138,522 - 178,157,703 (19,182)
query : 1 - 2,555 (2,555/2,555)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024796)
HIX0024796
HIT000094458
(
BC036517
)
(Zinc finger protein 354A.)
genome : 178,138,594 - 178,157,653 (19,060)
query : 6 - 2,436 (2,431/2,453)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.990)5'
coverage = 0.998
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024796)
HIX0024796
HIT000053088
(
BC047105
)
(Zinc finger protein 354A; Transcription factor 17; TCF-17; Zinc finger protein eZNF;)
genome : 178,138,597 - 178,157,660 (19,064)
query : 1 - 2,437 (2,437/2,453)
5 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;0.981)5'
coverage = 0.999
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024796)
HIX0024796
HIT000069916
(
AF116030
)
Representative transcript
(Zinc finger protein 354A; Transcription factor 17; TCF-17; Zinc finger protein eZNF;)
genome : 178,138,595 - 178,157,703 (19,109)
query : 7 - 2,500 (2,494/2,513)
5 exons
identity = 0.995
3'(0.994;1.000;1.000;1.000;0.993)5'
coverage = 0.998
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024796)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : BC078777
Mus
sp. (Mouse) : BC087540
Equus
sp. (Horse) : ENSECAT00000012891
Monodelphis
sp. (Opossum) : ENSMODT00000002643
Monodelphis
sp. (Opossum) : ENSMODT00000005405
Pongo
sp. (Orangutan) : ENSPPYT00000018747
Pan
sp. (Chimpanzee) : XM_001140640
Bos
sp. (Cow) : XM_602426
HIX0024796
HIT000129810 (
ENST00000335815
)
(Zinc finger protein 354A; Transcription factor 17; TCF-17; Zinc finger protein eZNF;)
genome : 178,138,593 - 178,157,703 (19,111)
query : 1 - 2,484 (2,484/2,484)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024796)
HIX0024796
HIT000102056
(
D89928
)
(Zinc finger protein 354A; Transcription factor 17; TCF-17; Zinc finger protein eZNF;)
genome : 178,138,596 - 178,157,657 (19,062)
query : 1 - 2,435 (2,435/2,435)
5 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;0.970)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024796)
HIX0024796
HIT000423508
(
AK290711
)
(Zinc finger protein 354A; Transcription factor 17; TCF-17; Zinc finger protein eZNF;)
genome : 178,138,624 - 178,157,598 (18,975)
query : 1 - 2,348 (2,348/2,348)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024796)
HIX0024796
HIT000619671 (
ENST00000520331
)
(Zinc finger protein 354A.)
genome : 178,140,474 - 178,156,384 (15,911)
query : 1 - 766 (766/766)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 11.5, extr 9, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024796)
HIX0024796
HIT000617434 (
ENST00000518048
)
(Zinc finger protein 354A.)
genome : 178,152,377 - 178,157,660 (5,284)
query : 1 - 564 (564/564)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 8, cyto 7.5, nucl 5.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024796)
HIX0024796
HIT000048754
(
AK128881
)
(Hypothetical short protein.)
genome : 178,157,048 - 178,157,670 (623)
query : 1 - 624 (624/624)
1 exon
identity = 0.987
3'(0.987)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024796)
HIX0032043
HIT000090902
(
BC024222
)
Representative transcript
(Acetoacetyl-CoA synthetase.)
genome : 178,191,865 - 178,245,436 (53,572)
query : 1 - 2,819 (2,819/2,836)
11 exons
identity = 0.996
3'(0.999;0.967;0.995;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;0.994)5'
coverage = 1.000
EC number :
EC 6.2.1.16
KEGG pathway :
00650 : Butanoate metabolism (47)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 6, cyto 6, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032043)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XR_023232
HIX0032043
HIT000603773 (
ENST00000503486
)
(Acetoacetyl-CoA synthetase.)
genome : 178,191,862 - 178,245,436 (53,575)
query : 1 - 2,822 (2,822/2,822)
11 exons
identity = 0.998
3'(1.000;0.967;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.16
KEGG pathway :
00650 : Butanoate metabolism (47)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 6, cyto 6, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032043)
HIX0032043
HIT000562297 (
NR_024035
)
(Acetoacetyl-CoA synthetase.)
genome : 178,191,862 - 178,203,277 (11,416)
query : 1 - 2,175 (2,175/2,175)
7 exons
identity = 0.997
3'(1.000;0.967;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.16
KEGG pathway :
00650 : Butanoate metabolism (47)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 7, cyto_nucl 6.16667, cyto_pero 4.16667,
extr 3, cyto 3, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032043)
HIX0032043
HIT000501518
(
BC140764
)
(Acetoacetyl-CoA synthetase.)
genome : 178,193,085 - 178,245,387 (52,303)
query : 1 - 1,553 (1,553/1,553)
11 exons
identity = 0.994
3'(1.000;0.962;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.997)5'
coverage = 1.000
EC number :
EC 6.2.1.16
KEGG pathway :
00650 : Butanoate metabolism (47)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 6, cyto 6, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032043)
HIX0032043
HIT000502884
(
BC144474
)
(Acetoacetyl-CoA synthetase.)
genome : 178,193,085 - 178,245,387 (52,303)
query : 1 - 1,552 (1,552/1,552)
11 exons
identity = 0.994
3'(1.000;0.962;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993)5'
coverage = 1.000
EC number :
EC 6.2.1.16
KEGG pathway :
00650 : Butanoate metabolism (47)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 6, cyto 6, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032043)
HIX0032043
HIT000635699 (
ENST00000536654
)
(Acetoacetyl-CoA synthetase.)
genome : 178,193,085 - 178,245,387 (52,303)
query : 1 - 1,553 (1,553/1,553)
11 exons
identity = 0.996
3'(1.000;0.967;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.16
KEGG pathway :
00650 : Butanoate metabolism (47)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 6, cyto 6, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032043)
HIX0032043
HIT000620729 (
ENST00000521412
)
(Acetoacetyl-CoA synthetase.)
genome : 178,194,205 - 178,224,612 (30,408)
query : 1 - 1,095 (1,095/1,095)
10 exons
identity = 0.979
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.866;
1.000;0.962;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.16
KEGG pathway :
00650 : Butanoate metabolism (47)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 2, nucl 1, cyto 1, cyto_nucl 1, pero 1,
golg 1, extr_plas 1, cyto_pero 1, cyto_golg 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032043)
HIX0164517
HIT000462094_03
(
DQ595563
)
Representative transcript
(Non-protein coding transcript.)
genome : 178,265,689 - 178,265,718 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164517)
HIX0207319
HIT000622133 (
ENST00000522847
)
(Conserved hypothetical protein.)
genome : 178,267,098 - 178,268,135 (1,038)
query : 1 - 1,038 (1,038/1,038)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 9, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207319)
HIX0019480
HIT000090530
(
BC022190
)
Representative transcript
(Zinc finger protein 354A.)
genome : 178,286,954 - 178,312,029 (25,076)
query : 1 - 2,800 (2,800/2,816)
5 exons
identity = 0.998
5'(0.989;1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019480)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK148756
Monodelphis
sp. (Opossum) : ENSMODT00000000346
Pongo
sp. (Orangutan) : ENSPPYT00000018749
Rattus
sp. (Rat) : XM_001072258
Macaca
sp. (Macaque) : XM_001102012
Pan
sp. (Chimpanzee) : XM_001148803
Equus
sp. (Horse) : XM_001497818
Canis
sp. (Dog) : XM_531878
HIX0019480
HIT000094425
(
BC036466
)
(Zinc finger protein 354A.)
genome : 178,286,954 - 178,312,029 (25,076)
query : 1 - 2,800 (2,800/2,816)
5 exons
identity = 0.998
5'(0.989;1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019480)
HIX0019480
HIT000123152 (
ENST00000322434
)
(Zinc finger protein 354A.)
genome : 178,286,954 - 178,312,029 (25,076)
query : 1 - 2,802 (2,802/2,802)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019480)
HIX0019480
HIT000211731 (
NM_058230
)
(Zinc finger protein 354A.)
genome : 178,286,954 - 178,311,424 (24,471)
query : 1 - 2,197 (2,197/2,200)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019480)
HIX0019480
HIT000014344
(
AK057737
)
(Zinc finger protein 354A.)
genome : 178,287,001 - 178,311,415 (24,415)
query : 1 - 2,140 (2,140/2,140)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019480)
HIX0019480
HIT000422464
(
AK289667
)
(Zinc finger protein 354A.)
genome : 178,287,044 - 178,311,353 (24,310)
query : 1 - 2,036 (2,036/2,036)
5 exons
identity = 1.000
5'(1.000;0.988;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019480)
HIX0019480
HIT000619716 (
ENST00000520377
)
(Zinc finger protein 354A.)
genome : 178,287,688 - 178,309,855 (22,168)
query : 1 - 763 (763/763)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 12, cyto_nucl 9, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019480)
HIX0019480
HIT000337865
(
BC104777
)
(Zinc finger protein 354A.)
genome : 178,287,996 - 178,311,319 (23,324)
query : 5 - 1,923 (1,919/1,923)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019480)
HIX0019480
HIT000340240
(
BC112111
)
(Zinc finger protein 354A.)
genome : 178,287,996 - 178,311,319 (23,324)
query : 5 - 1,923 (1,919/1,923)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 0.998
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019480)
HIX0019480
HIT000622003 (
ENST00000522714
)
(Zinc finger protein 502.)
genome : 178,310,866 - 178,315,123 (4,258)
query : 1 - 1,280 (1,280/1,280)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 18.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019480)
HIX0019480
HIT000621916 (
ENST00000522624
)
(Disrupted in schizophrenia 1 protein isoform c.)
genome : 178,311,168 - 178,315,123 (3,956)
query : 1 - 986 (986/986)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 12, cyto_nucl 12, cyto_plas 10.1667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019480)
HIX0005480
HIT000314627 (
ENST00000361362
)
(Zinc finger protein 2; Zfp-2; Protein mKR2;)
genome : 178,322,895 - 178,360,213 (37,319)
query : 1 - 2,429 (2,429/2,429)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005480)
HIX0005480
HIT000619994 (
ENST00000520660
)
(Zinc finger protein 454.)
genome : 178,322,899 - 178,358,383 (35,485)
query : 1 - 598 (598/598)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 13, nucl 9, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005480)
HIX0005480
HIT000209870 (
NM_030613
)
(Zinc finger protein 2; Zfp-2; Protein mKR2;)
genome : 178,322,916 - 178,360,210 (37,295)
query : 1 - 2,405 (2,405/2,405)
5 exons
identity = 0.998
5'(1.000;1.000;0.989;0.993;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005480)
HIX0005480
HIT000249655
(
AK131367
)
Representative transcript
(Zinc finger protein 2; Zfp-2; Protein mKR2;)
genome : 178,322,916 - 178,360,210 (37,295)
query : 1 - 2,405 (2,405/2,405)
5 exons
identity = 0.998
5'(1.000;1.000;0.989;0.993;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005480)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK036776
Bos
sp. (Cow) : BC140589
Danio
sp. (Zebrafish) : BC153948
Equus
sp. (Horse) : ENSECAT00000005072
Gallus
sp. (Chicken) : ENSGALT00000035592
Monodelphis
sp. (Opossum) : ENSMODT00000010086
Pongo
sp. (Orangutan) : ENSPPYT00000018751
Rattus
sp. (Rat) : XM_001072183
Macaca
sp. (Macaque) : XM_001097848
Canis
sp. (Dog) : XM_531878
HIX0005480
HIT000620131 (
ENST00000520805
)
(Zinc finger protein 74 isoform a.)
genome : 178,322,916 - 178,358,340 (35,425)
query : 1 - 532 (532/532)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 13, nucl 9, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005480)
HIX0005480
HIT000435483
(
BC142989
)
(Zinc finger protein 2; Zfp-2; Protein mKR2;)
genome : 178,322,928 - 178,360,211 (37,284)
query : 2 - 2,396 (2,395/2,411)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005480)
HIX0207225
HIT000617208 (
ENST00000517817
)
(Defective-in-cullin neddylation protein family protein.)
genome : 178,336,711 - 178,337,610 (900)
query : 1 - 900 (900/900)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, nucl 11.5, cyto 10.5, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207225)
HIX0005480
HIT000390832
(
BC132779
)
(Zinc finger protein 2; Zfp-2; Protein mKR2;)
genome : 178,339,982 - 178,360,054 (20,073)
query : 14 - 2,043 (2,030/2,043)
3 exons
identity = 0.999
5'(0.989;1.000;0.999)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005480)
HIX0005480
HIT000502642
(
BC144213
)
(Zinc finger protein 2; Zfp-2; Protein mKR2;)
genome : 178,339,982 - 178,360,054 (20,073)
query : 14 - 2,043 (2,030/2,043)
3 exons
identity = 0.998
5'(0.989;1.000;0.998)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005480)
HIX0005480
HIT000502645
(
BC144216
)
(Zinc finger protein 2; Zfp-2; Protein mKR2;)
genome : 178,339,982 - 178,360,054 (20,073)
query : 14 - 2,154 (2,141/2,154)
4 exons
identity = 0.997
5'(0.989;0.943;1.000;0.999)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005480)
HIX0005480
HIT000603795 (
ENST00000503510
)
(Zinc finger protein 2; Zfp-2; Protein mKR2;)
genome : 178,339,982 - 178,360,054 (20,073)
query : 14 - 2,043 (2,030/2,043)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005480)
HIX0005480
HIT000619641 (
ENST00000520301
)
(Zinc finger protein 2; Zfp-2; Protein mKR2;)
genome : 178,339,982 - 178,360,054 (20,073)
query : 14 - 2,043 (2,030/2,043)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005480)
HIX0005480
HIT000622568 (
ENST00000523286
)
(Zinc finger protein 2; Zfp-2; Protein mKR2;)
genome : 178,339,982 - 178,360,054 (20,073)
query : 14 - 2,154 (2,141/2,154)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005480)
HIX0005480
HIT000390834
(
BC132781
)
(Zinc finger protein 2; Zfp-2; Protein mKR2;)
genome : 178,339,982 - 178,360,047 (20,066)
query : 14 - 2,061 (2,048/2,061)
3 exons
identity = 0.999
5'(1.000;0.993;0.999)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005480)
HIX0207253
HIT000618543_02 (
ENST00000519180
)
(GPI biosynthesis protein Pig-F family protein.)
genome : 178,349,065 - 178,349,717 (653)
query : 1 - 653 (653/653)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207253)
HIX0206340
HIT000443029_06
(
DQ576498
)
Representative transcript
(Non-protein coding transcript.)
genome : 178,351,747 - 178,351,777 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206340)
HIX0005480
HIT000008555
(
AK025281
)
(Zinc finger protein 2; Zfp-2; Protein mKR2;)
genome : 178,358,470 - 178,360,211 (1,742)
query : 1 - 1,742 (1,742/1,759)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005480)
HIX0200799
HIT000012359
(
AK055745
)
Representative transcript
(PDZ and LIM domain protein 5 isoform i.)
genome : 178,365,678 - 178,368,084 (2,407)
query : 1 - 2,287 (2,287/2,287)
2 exons
identity = 0.997
5'(1.000;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, extr 7, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200799)
HIX0005479
HIT000122307 (
ENST00000320129
)
(Zinc finger protein 454.)
genome : 178,368,192 - 178,393,434 (25,243)
query : 1 - 2,332 (2,332/2,332)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005479)
HIX0005479
HIT000318674 (
NM_182594
)
(Zinc finger protein 454.)
genome : 178,368,194 - 178,393,218 (25,025)
query : 1 - 2,114 (2,114/2,114)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005479)
HIX0005479
HIT000655306 (
NM_001178089
)
(Zinc finger protein 454.)
genome : 178,368,194 - 178,393,218 (25,025)
query : 1 - 2,172 (2,172/2,172)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005479)
HIX0005479
HIT000655307 (
NM_001178090
)
(Zinc finger protein 454.)
genome : 178,368,194 - 178,393,218 (25,025)
query : 1 - 2,111 (2,111/2,111)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005479)
HIX0005479
HIT000019618
(
AK094763
)
Representative transcript
(Zinc finger protein 454.)
genome : 178,368,224 - 178,393,434 (25,211)
query : 1 - 2,300 (2,300/2,300)
5 exons
identity = 0.993
5'(1.000;1.000;0.992;1.000;0.992)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005479)
HIX0005479
HIT000425114
(
AK292317
)
(Zinc finger protein 454.)
genome : 178,368,224 - 178,393,218 (24,995)
query : 1 - 2,142 (2,142/2,142)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005479)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC049793
Gallus
sp. (Chicken) : ENSGALT00000035876
Macaca
sp. (Macaque) : ENSMMUT00000012546
Monodelphis
sp. (Opossum) : ENSMODT00000009384
Tetraodon
sp. (Tetraodon) : GSTENT00018363001
Equus
sp. (Horse) : XM_001501556
Danio
sp. (Zebrafish) : XM_001922670
Pan
sp. (Chimpanzee) : XM_527146
Canis
sp. (Dog) : XM_531878
HIX0005479
HIT000618914 (
ENST00000519564
)
(Zinc finger protein 454.)
genome : 178,368,224 - 178,393,218 (24,995)
query : 1 - 2,142 (2,142/2,142)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005479)
HIX0005479
HIT000622113 (
ENST00000522827
)
(Zinc finger protein 454.)
genome : 178,369,429 - 178,373,987 (4,559)
query : 1 - 614 (614/629)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.976
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, nucl 10.5, cyto 10.5, mito 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005479)
HIX0005479
HIT000340405
(
BC112276
)
(Zinc finger protein 454.)
genome : 178,369,728 - 178,393,003 (23,276)
query : 1 - 1,663 (1,663/1,663)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005479)
HIX0005479
HIT000338149
(
BC105061
)
(Zinc finger protein 454.)
genome : 178,369,730 - 178,393,003 (23,274)
query : 1 - 1,661 (1,661/1,661)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005479)
HIX0207256
HIT000618841 (
ENST00000519491
)
(Conserved hypothetical protein.)
genome : 178,396,391 - 178,417,117 (20,727)
query : 1 - 674 (674/674)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207256)
HIX0024983
HIT000055815
(
BX647168
)
(Metabotropic glutamate receptor 6; mGluR6; Precursor;)
genome : 178,404,588 - 178,411,069 (6,482)
query : 1 - 5,428 (5,428/5,447)
2 exons
identity = 0.998
3'(0.998;0.997)5'
coverage = 1.000
InterPro :
IPR017978 : GPCR, family 3, C-terminal
IPR017979 : GPCR, family 3, conserved site
GO :
0004930 : Molecular Function : G-protein coupled receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R._mito 3.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024983)
HIX0024983
HIT000104361 (
ENST00000231188
)
(Metabotropic glutamate receptor 6; mGluR6; Precursor;)
genome : 178,405,328 - 178,422,124 (16,797)
query : 1 - 6,143 (6,143/6,143)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024983)
HIX0024983
HIT000197853 (
NM_000843
)
(Metabotropic glutamate receptor 6; mGluR6; Precursor;)
genome : 178,405,328 - 178,422,124 (16,797)
query : 1 - 6,143 (6,143/6,143)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024983)
HIX0024983
HIT000617110 (
ENST00000517717
)
(Metabotropic glutamate receptor 6; mGluR6; Precursor;)
genome : 178,408,658 - 178,421,966 (13,309)
query : 19 - 2,673 (2,655/2,673)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.993
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024983)
HIX0024983
HIT000618370 (
ENST00000519003
)
(Metabotropic glutamate receptor 6; mGluR6; Precursor;)
genome : 178,409,808 - 178,413,253 (3,446)
query : 1 - 538 (538/538)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024983)
HIX0024983
HIT000617468 (
ENST00000518082
)
(Metabotropic glutamate receptor 6; mGluR6; Precursor;)
genome : 178,413,444 - 178,415,973 (2,530)
query : 1 - 579 (579/579)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 8.5, mito 8, cyto_nucl 8, cyto 6.5, plas 4,
E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024983)
HIX0024983
HIT000245897
(
AJ245872
)
Representative transcript
(Metabotropic glutamate receptor 6; mGluR6; Precursor;)
genome : 178,413,540 - 178,416,143 (2,604)
query : 16 - 584 (569/584)
3 exons
identity = 0.993
3'(1.000;0.993;0.986)5'
coverage = 0.974
InterPro :
IPR000112 : GPCR, family 3, metabotropic glutamate receptor 6
IPR001828 : Extracellular ligand-binding receptor
IPR011500 : GPCR, family 3, nine cysteines domain
IPR017979 : GPCR, family 3, conserved site
IPR028082 : Periplasmic binding protein-like I
GO :
0004930 : Molecular Function : G-protein coupled receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6, cyto 5.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024983)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC129205
Mus
sp. (Mouse) : BC152480
Rattus
sp. (Rat) : D13963
Macaca
sp. (Macaque) : DQ417748
Bos
sp. (Cow) : ENSBTAT00000021547
Canis
sp. (Dog) : ENSCAFT00000000509
Oryzias
sp. (Medaka) : ENSORLT00000017877
Pongo
sp. (Orangutan) : ENSPPYT00000018752
Pan
sp. (Chimpanzee) : ENSPTRT00000032562
Tetraodon
sp. (Tetraodon) : GSTENT00014074001
Takifugu
sp. (Fugu) : SINFRUT00000164838
Monodelphis
sp. (Opossum) : XM_001371661
Equus
sp. (Horse) : XM_001916934
HIX0024983
HIT000245896
(
AJ245871
)
(Metabotropic glutamate receptor 6; mGluR6; Precursor;)
genome : 178,413,540 - 178,416,044 (2,505)
query : 13 - 482 (470/482)
3 exons
identity = 0.994
3'(1.000;0.993;0.982)5'
coverage = 0.975
InterPro :
IPR000112 : GPCR, family 3, metabotropic glutamate receptor 6
IPR001828 : Extracellular ligand-binding receptor
IPR011500 : GPCR, family 3, nine cysteines domain
IPR017979 : GPCR, family 3, conserved site
IPR028082 : Periplasmic binding protein-like I
GO :
0004930 : Molecular Function : G-protein coupled receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024983)
HIX0207252
HIT000618538 (
ENST00000519175
)
(Hypothetical short protein.)
genome : 178,422,279 - 178,423,207 (929)
query : 1 - 363 (363/363)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, cyto 3.5, mito_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207252)
HIX0207296
HIT000620803 (
ENST00000521486
)
(WD40-repeat-containing domain containing protein.)
genome : 178,424,970 - 178,425,816 (847)
query : 1 - 847 (847/847)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207296)
HIX0024992
HIT000542083 (
ENST00000444149
)
(Zinc finger protein 879;)
genome : 178,450,753 - 178,462,050 (11,298)
query : 1 - 3,289 (3,289/3,304)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024992)
HIX0024992
HIT000560299 (
NM_001136116
)
(Zinc finger protein 879;)
genome : 178,450,776 - 178,461,388 (10,613)
query : 1 - 2,604 (2,604/2,605)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024992)
HIX0024992
HIT000621738 (
ENST00000522442
)
(Zinc finger protein 879;)
genome : 178,450,805 - 178,459,353 (8,549)
query : 1 - 553 (553/553)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 9.5, mito_pero 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024992)
HIX0024992
HIT000619243 (
ENST00000519896
)
(Zinc finger protein 879;)
genome : 178,450,805 - 178,459,322 (8,518)
query : 1 - 543 (543/543)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cysk 10, nucl 4, extr 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024992)
HIX0024992
HIT000057384
(
BX648737
)
Representative transcript
(Zinc finger protein 879;)
genome : 178,450,806 - 178,462,050 (11,245)
query : 1 - 3,232 (3,232/3,249)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024992)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK036152
Takifugu
sp. (Fugu) : SINFRUT00000153945
Rattus
sp. (Rat) : XM_001072082
Macaca
sp. (Macaque) : XM_001102824
Monodelphis
sp. (Opossum) : XM_001368963
Equus
sp. (Horse) : XM_001497646
Gallus
sp. (Chicken) : XM_423860
Pan
sp. (Chimpanzee) : XM_518146
Canis
sp. (Dog) : XM_531880
HIX0024992
HIT000495128
(
AK300504
)
(Zinc finger protein 879;)
genome : 178,450,844 - 178,461,387 (10,544)
query : 1 - 2,531 (2,531/2,531)
5 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024992)
HIX0024992
HIT000620602 (
ENST00000521285
)
(Zinc finger protein 354C; Kidney, ischemia, and developmentally-regulated protein 3; hKID3;)
genome : 178,451,439 - 178,454,563 (3,125)
query : 1 - 690 (690/690)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 6, cyto_nucl 6, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024992)
HIX0121151
HIT000439836
(
DQ573305
)
Representative transcript
(Non-protein coding transcript.)
genome : 178,471,586 - 178,471,615 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0121151)
HIX0018017
HIT000120526 (
ENST00000315475
)
(Zinc finger protein 354C; Kidney, ischemia, and developmentally-regulated protein 3; hKID3;)
genome : 178,487,416 - 178,510,538 (23,123)
query : 1 - 5,411 (5,411/5,411)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018017)
HIX0018017
HIT000260833
(
BC063312
)
Representative transcript
(Zinc finger protein 354C; Kidney, ischemia, and developmentally-regulated protein 3; hKID3;)
genome : 178,487,416 - 178,510,424 (23,009)
query : 1 - 5,295 (5,295/5,310)
5 exons
identity = 0.995
5'(0.996;1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018017)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF321874
Mus
sp. (Mouse) : AK220194
Oryzias
sp. (Medaka) : ENSORLT00000009110
Pongo
sp. (Orangutan) : ENSPPYT00000018753
Macaca
sp. (Macaque) : XM_001102824
Pan
sp. (Chimpanzee) : XM_001149321
Equus
sp. (Horse) : XM_001916914
Canis
sp. (Dog) : XM_531880
Bos
sp. (Cow) : XM_601630
HIX0018017
HIT000081237
(
AF525463
)
(Zinc finger protein 354C; Kidney, ischemia, and developmentally-regulated protein 3; hKID3;)
genome : 178,487,607 - 178,507,690 (20,084)
query : 1 - 2,372 (2,372/2,390)
5 exons
identity = 1.000
5'(0.984;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018017)
HIX0018017
HIT000317131 (
NM_014594
)
(Zinc finger protein 354C; Kidney, ischemia, and developmentally-regulated protein 3; hKID3;)
genome : 178,487,607 - 178,507,690 (20,084)
query : 1 - 2,372 (2,372/2,390)
5 exons
identity = 1.000
5'(0.984;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018017)
HIX0018017
HIT000078909
(
AF395540
)
(Zinc finger protein 354C; Kidney, ischemia, and developmentally-regulated protein 3; hKID3;)
genome : 178,503,446 - 178,507,690 (4,245)
query : 1 - 2,230 (2,230/2,255)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018017)
HIX0018017
HIT000025771
(
AL137483
)
(Zinc finger protein 354C; Kidney, ischemia, and developmentally-regulated protein 3; hKID3;)
genome : 178,506,138 - 178,507,690 (1,553)
query : 1 - 1,553 (1,553/1,579)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018017)
HIX0024870
HIT000044258
(
AK124385
)
Representative transcript
(Cold shock domain-containing protein E1; Protein UNR; Fragment;)
genome : 178,508,200 - 178,510,530 (2,331)
query : 1 - 2,331 (2,331/2,331)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
InterPro :
IPR002059 : Cold-shock protein, DNA-binding
IPR011129 : Cold shock protein
IPR012340 : Nucleic acid-binding, OB-fold
IPR024642 : SUZ-C domain
GO :
0003676 : Molecular Function : nucleic acid binding
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11, cyto 10.5, nucl 6.5,
extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024870)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : ENSORLT00000000879
Takifugu
sp. (Fugu) : SINFRUT00000180392
Macaca
sp. (Macaque) : XM_001098123
Danio
sp. (Zebrafish) : XM_702926
Pan
sp. (Chimpanzee) : XR_020346
Mus
sp. (Mouse) : XR_031138
HIX0024870
HIT000623008 (
ENST00000523735
)
(Cold shock domain-containing protein E1; Protein UNR; Fragment;)
genome : 178,509,681 - 178,510,195 (515)
query : 1 - 515 (515/515)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024870)
HIX0032006
HIT000054391
(
BX537606
)
(Hypothetical short protein.)
genome : 178,537,854 - 178,539,212 (1,359)
query : 1 - 1,359 (1,359/1,437)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 7.5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032006)
HIX0032006
HIT000204634 (
NM_014244
)
(A disintegrin and metalloproteinase with thrombospondin motifs 2; ADAM-TS 2; ADAM-TS2; ADAMTS-2; EC=3.4.24.14; Procollagen I N-proteinase; PC I-NP; Procollagen I/II amino propeptide-processing enzyme; Procollagen N-endopeptidase; pNPI; Precursor;)
genome : 178,537,852 - 178,772,431 (234,580)
query : 1 - 6,754 (6,754/6,772)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.14
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032006)
HIX0032006
HIT000336032
(
BC098581
)
(Hypothetical short protein.)
genome : 178,537,854 - 178,540,736 (2,883)
query : 1 - 2,883 (2,883/2,901)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12.1667, cyto_nucl 5, extr 4,
nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032006)
HIX0032006
HIT000106165 (
ENST00000251582
)
(A disintegrin and metalloproteinase with thrombospondin motifs 2; ADAM-TS 2; ADAM-TS2; ADAMTS-2; EC=3.4.24.14; Procollagen I N-proteinase; PC I-NP; Procollagen I/II amino propeptide-processing enzyme; Procollagen N-endopeptidase; pNPI; Precursor;)
genome : 178,537,852 - 178,772,431 (234,580)
query : 1 - 6,754 (6,754/6,754)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.14
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032006)
HIX0032006
HIT000244001
(
AJ003125
)
Representative transcript
(A disintegrin and metalloproteinase with thrombospondin motifs 2; ADAM-TS 2; ADAM-TS2; ADAMTS-2; EC=3.4.24.14; Procollagen I N-proteinase; PC I-NP; Procollagen I/II amino propeptide-processing enzyme; Procollagen N-endopeptidase; pNPI; Precursor;)
genome : 178,540,868 - 178,772,329 (231,462)
query : 1 - 3,636 (3,636/3,636)
22 exons
identity = 0.999
3'(0.998;1.000;0.992;1.000;1.000;0.994;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.14
InterPro :
IPR000884 : Thrombospondin, type 1 repeat
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR002870 : Peptidase M12B, propeptide
IPR010294 : ADAM-TS Spacer 1
IPR010909 : PLAC
IPR013273 : Peptidase M12B, ADAM-TS
IPR013275 : Peptidase M12B, ADAM-TS2
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005578 : Cellular Component : proteinaceous extracellular matrix
0006508 : Biological Process : proteolysis
0008233 : Molecular Function : peptidase activity
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
0031012 : Cellular Component : extracellular matrix
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032006)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC046456
Canis
sp. (Dog) : ENSCAFT00000000511
Equus
sp. (Horse) : ENSECAT00000017505
Oryzias
sp. (Medaka) : ENSORLT00000016354
Pongo
sp. (Orangutan) : ENSPPYT00000018754
Tetraodon
sp. (Tetraodon) : GSTENT00008314001
Takifugu
sp. (Fugu) : SINFRUT00000136382
Takifugu
sp. (Fugu) : SINFRUT00000150215
Bos
sp. (Cow) : X96389
Rattus
sp. (Rat) : XM_001071965
Macaca
sp. (Macaque) : XM_001102920
Monodelphis
sp. (Opossum) : XM_001379076
Pan
sp. (Chimpanzee) : XM_518147
Danio
sp. (Zebrafish) : XM_695292
Gallus
sp. (Chicken) : XR_027221
HIX0032006
HIT000622222 (
ENST00000522937
)
(A disintegrin and metalloproteinase with thrombospondin motifs 3; ADAM-TS 3; ADAM-TS3; ADAMTS-3; EC=3.4.24.-; Procollagen II N-proteinase; PC II-NP; Procollagen II amino propeptide-processing enzyme; Precursor;)
genome : 178,541,065 - 178,548,855 (7,791)
query : 1 - 455 (455/455)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9, cyto_nucl 8.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032006)
HIX0032006
HIT000622730 (
ENST00000523450
)
(A disintegrin and metalloproteinase with thrombospondin motifs 2; ADAM-TS 2; ADAM-TS2; ADAMTS-2; EC=3.4.24.14; Procollagen I N-proteinase; PC I-NP; Procollagen I/II amino propeptide-processing enzyme; Procollagen N-endopeptidase; pNPI; Precursor;)
genome : 178,541,290 - 178,549,840 (8,551)
query : 1 - 322 (322/322)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.14
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3, mito 2, cyto_nucl 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032006)
HIX0032006
HIT000617717 (
ENST00000518335
)
(A disintegrin and metalloproteinase with thrombospondin motifs 2; ADAM-TS 2; ADAM-TS2; ADAMTS-2; EC=3.4.24.14; Procollagen I N-proteinase; PC I-NP; Procollagen I/II amino propeptide-processing enzyme; Procollagen N-endopeptidase; pNPI; Precursor;)
genome : 178,548,212 - 178,549,768 (1,557)
query : 1 - 664 (664/664)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.14
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, nucl 10, cyto_nucl 9.5, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032006)
HIX0032006
HIT000208358 (
NM_021599
)
(A disintegrin and metalloproteinase with thrombospondin motifs 2; ADAM-TS 2; ADAM-TS2; ADAMTS-2; EC=3.4.24.14; Procollagen I N-proteinase; PC I-NP; Procollagen I/II amino propeptide-processing enzyme; Procollagen N-endopeptidase; pNPI; Precursor;)
genome : 178,577,886 - 178,772,431 (194,546)
query : 1 - 2,047 (2,047/2,064)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.14
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, lyso 5, E.R. 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032006)
HIX0032006
HIT000427079
(
AK308213
)
(A disintegrin and metalloproteinase with thrombospondin motifs 2 isoform 2 preproprotein.)
genome : 178,577,887 - 178,772,431 (194,545)
query : 1 - 2,050 (2,050/2,050)
11 exons
identity = 0.997
3'(0.997;0.991;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.14
InterPro :
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR002870 : Peptidase M12B, propeptide
IPR013275 : Peptidase M12B, ADAM-TS2
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005578 : Cellular Component : proteinaceous extracellular matrix
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, lyso 7, golg 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032006)
HIX0032006
HIT000111189 (
ENST00000274609
)
(A disintegrin and metalloproteinase with thrombospondin motifs 2 isoform 2 preproprotein.)
genome : 178,577,889 - 178,772,431 (194,543)
query : 1 - 2,044 (2,044/2,044)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.14
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, lyso 5, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032006)
HIX0216712
HIT000429140
(
AK310274
)
Representative transcript
(THO complex subunit 3.)
genome : 177,303,256 - 177,377,733 (74,478)
query : 1 - 1,123 (1,123/1,123)
6 exons
identity = 0.998
5'(1.000;1.000;0.995;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10, cyto_nucl 7.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216712)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK010668
Monodelphis
sp. (Opossum) : ENSMODT00000006719
Rattus
sp. (Rat) : ENSRNOT00000000116
Pan
sp. (Chimpanzee) : XM_001156891
Equus
sp. (Horse) : XM_001502732
HIX0216712
HIT000607059 (
ENST00000507037
)
(THO complex subunit 3.)
genome : 177,303,256 - 177,377,733 (74,478)
query : 1 - 1,123 (1,123/1,123)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10, cyto_nucl 7.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216712)
HIX0019604
HIT000117880 (
ENST00000308158
)
(5-phosphohydroxy-L-lysine phospho-lyase; EC=4.2.3.134; Alanine--glyoxylate aminotransferase 2-like 2;)
genome : 177,635,498 - 177,659,786 (24,289)
query : 1 - 2,038 (2,038/2,038)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16.5, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000051937
(
BC037567
)
Representative transcript
(5-phosphohydroxy-L-lysine phospho-lyase; EC=4.2.3.134; Alanine--glyoxylate aminotransferase 2-like 2;)
genome : 177,635,590 - 177,659,786 (24,197)
query : 1 - 1,945 (1,945/2,010)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR005814 : Aminotransferase class-III
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0008483 : Molecular Function : transaminase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK133235
Rattus
sp. (Rat) : BC079163
Danio
sp. (Zebrafish) : BC110111
Gallus
sp. (Chicken) : CR385620
Tetraodon
sp. (Tetraodon) : CR693147
Monodelphis
sp. (Opossum) : ENSMODT00000005204
Oryzias
sp. (Medaka) : ENSORLT00000006736
Pongo
sp. (Orangutan) : ENSPPYT00000018743
Takifugu
sp. (Fugu) : SINFRUT00000164668
Macaca
sp. (Macaque) : XM_001095786
Equus
sp. (Horse) : XM_001498244
Gallus
sp. (Chicken) : XM_414688
Canis
sp. (Dog) : XM_538569
Bos
sp. (Cow) : XM_617398
Pan
sp. (Chimpanzee) : XR_023871
HIX0019604
HIT000091439
(
BC028002
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,635,645 - 177,659,774 (24,130)
query : 1 - 2,297 (2,297/2,415)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR005814 : Aminotransferase class-III
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0008483 : Molecular Function : transaminase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, mito_nucl 10, cyto_nucl 9.83333, nucl 9.5,
cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000214329 (
NM_153373
)
(5-phosphohydroxy-L-lysine phospho-lyase; EC=4.2.3.134; Alanine--glyoxylate aminotransferase 2-like 2;)
genome : 177,635,540 - 177,659,803 (24,264)
query : 1 - 2,013 (2,013/2,017)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16.5, nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000095459
(
BC039012
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,635,640 - 177,659,769 (24,130)
query : 1 - 1,969 (1,969/2,070)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005814 : Aminotransferase class-III
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0008483 : Molecular Function : transaminase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 8.16667, extr 8, mito 7, nucl 6.5, cyto 6.5,
cyto_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000051869
(
BC037238
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,635,585 - 177,659,792 (24,208)
query : 1 - 2,780 (2,780/2,806)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.989;0.987;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR005814 : Aminotransferase class-III
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0008483 : Molecular Function : transaminase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 27, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000077302
(
AF318375
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,635,585 - 177,671,205 (35,621)
query : 22 - 2,925 (2,904/2,943)
7 exons
identity = 0.980
3'(1.000;1.000;1.000;1.000;0.999;1.000;0.725)5'
coverage = 0.992
InterPro :
IPR005814 : Aminotransferase class-III
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0008483 : Molecular Function : transaminase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 8, mito 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000262713
(
BC067745
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,635,585 - 177,659,783 (24,199)
query : 1 - 1,659 (1,659/1,675)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR005814 : Aminotransferase class-III
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0008483 : Molecular Function : transaminase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, cyto_nucl 17.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000033586
(
BC008009
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,635,588 - 177,659,791 (24,204)
query : 1 - 1,539 (1,539/1,556)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993)5'
coverage = 1.000
InterPro :
IPR005814 : Aminotransferase class-III
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0008483 : Molecular Function : transaminase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10.5, mito 6, nucl 3.5, extr 3,
pero 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000592872 (
ENST00000489262
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,635,585 - 177,659,792 (24,208)
query : 1 - 2,780 (2,780/2,780)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 26, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000585773 (
ENST00000481811
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,635,585 - 177,657,941 (22,357)
query : 1 - 2,709 (2,709/2,709)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.5, nucl 8, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000578356 (
ENST00000474052
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,635,588 - 177,659,791 (24,204)
query : 1 - 1,539 (1,539/1,539)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10.5, mito 6, nucl 3.5, extr 3,
pero 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000424858
(
AK292061
)
(5-phosphohydroxy-L-lysine phospho-lyase; EC=4.2.3.134; Alanine--glyoxylate aminotransferase 2-like 2;)
genome : 177,635,591 - 177,659,785 (24,195)
query : 1 - 1,944 (1,944/1,944)
13 exons
identity = 0.999
3'(1.000;0.988;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005814 : Aminotransferase class-III
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0008483 : Molecular Function : transaminase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000596644 (
ENST00000493197
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,635,640 - 177,659,769 (24,130)
query : 1 - 1,969 (1,969/1,969)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 8.16667, extr 8, mito 7, nucl 6.5, cyto 6.5,
cyto_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000597534 (
ENST00000494126
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,635,645 - 177,659,774 (24,130)
query : 1 - 2,297 (2,297/2,297)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, mito_nucl 10, cyto_nucl 9.83333, nucl 9.5,
cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000610733 (
ENST00000510991
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,635,655 - 177,657,321 (21,667)
query : 1 - 814 (814/814)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000339502
(
BC110335
)
(5-phosphohydroxy-L-lysine phospho-lyase; EC=4.2.3.134; Alanine--glyoxylate aminotransferase 2-like 2;)
genome : 177,635,738 - 177,659,795 (24,058)
query : 1 - 1,807 (1,807/1,867)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.993)5'
coverage = 1.000
InterPro :
IPR005814 : Aminotransferase class-III
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0008483 : Molecular Function : transaminase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000610661 (
ENST00000510913
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,649,477 - 177,657,074 (7,598)
query : 1 - 643 (643/643)
6 exons
identity = 0.994
3'(1.000;1.000;0.971;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 13.5, cyto 11.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000613921 (
ENST00000514424
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,651,332 - 177,657,050 (5,719)
query : 1 - 584 (584/584)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 14.5, cyto 10, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000123551 (
ENST00000323594
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,651,450 - 177,659,631 (8,182)
query : 1 - 739 (739/739)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 14, nucl 11, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0019604
HIT000606093 (
ENST00000506001
)
(5-phosphohydroxy-L-lysine phospho-lyase.)
genome : 177,651,513 - 177,657,307 (5,795)
query : 1 - 583 (583/583)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 7.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019604)
HIX0024806
HIT000208020 (
NM_020666
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,029,665 - 178,054,054 (24,390)
query : 1 - 2,507 (2,507/2,524)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000435941
(
BC151233
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,029,665 - 178,054,089 (24,425)
query : 1 - 3,721 (3,721/3,736)
13 exons
identity = 0.998
3'(1.000;1.000;0.975;1.000;1.000;1.000;1.000;
1.000;1.000;0.998;1.000;1.000;0.993)5'
coverage = 1.000
EC number :
EC 2.7.12.1
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 14.3333, cyto_plas 13.8333,
nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000120840 (
ENST00000316308
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,029,665 - 178,054,115 (24,451)
query : 1 - 2,568 (2,568/2,568)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000620203 (
ENST00000520878
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,029,665 - 178,054,089 (24,425)
query : 1 - 3,722 (3,722/3,722)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 16.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000430351
(
AK311485
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,030,169 - 178,054,056 (23,888)
query : 1 - 1,955 (1,955/1,955)
13 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;0.988;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000621439 (
ENST00000522136
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,030,169 - 178,054,056 (23,888)
query : 1 - 1,955 (1,955/1,955)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000260763
(
BC063116
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,030,273 - 178,054,042 (23,770)
query : 5 - 3,466 (3,462/3,492)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 16.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000076560
(
AF294429
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,030,271 - 178,050,417 (20,147)
query : 1 - 1,793 (1,793/1,814)
12 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000306526
(
CR749504
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,030,271 - 178,054,030 (23,760)
query : 1 - 2,780 (2,780/2,798)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;0.988;1.000;0.989;1.000;
1.000;1.000;1.000;1.000;0.998;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000620936 (
ENST00000521621
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,030,271 - 178,054,030 (23,760)
query : 1 - 2,780 (2,780/2,780)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000618933 (
ENST00000519583
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,030,273 - 178,054,042 (23,770)
query : 1 - 3,462 (3,462/3,462)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 6, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000500293
(
BC136261
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,030,593 - 178,054,002 (23,410)
query : 1 - 1,527 (1,527/1,531)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.997
EC number :
EC 2.7.12.1
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000501998
(
BC143547
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,030,590 - 178,054,002 (23,413)
query : 1 - 1,206 (1,206/1,206)
10 exons
identity = 0.997
3'(1.000;0.949;0.990;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
InterPro :
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000088861
(
BC015942
)
Representative transcript
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,030,630 - 178,054,054 (23,425)
query : 1 - 1,542 (1,542/1,556)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172719
Rattus
sp. (Rat) : BC079006
Danio
sp. (Zebrafish) : BC090270
Bos
sp. (Cow) : BC123633
Gallus
sp. (Chicken) : BX931976
Monodelphis
sp. (Opossum) : ENSMODT00000005182
Oryzias
sp. (Medaka) : ENSORLT00000006632
Takifugu
sp. (Fugu) : SINFRUT00000157113
Equus
sp. (Horse) : XM_001501953
Canis
sp. (Dog) : XM_531875
Pan
sp. (Chimpanzee) : XR_023202
HIX0024806
HIT000501989
(
BC143538
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,030,908 - 178,054,002 (23,095)
query : 1 - 1,266 (1,266/1,266)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
InterPro :
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cysk 12, cyto_plas 8, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000499238
(
AK304614
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,044,072 - 178,054,055 (9,984)
query : 2 - 858 (857/858)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000619540 (
ENST00000520199
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,044,072 - 178,054,055 (9,984)
query : 1 - 857 (857/857)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000093518
(
BC034633
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,044,701 - 178,057,616 (12,916)
query : 1 - 1,302 (1,302/1,317)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000620234 (
ENST00000520909
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,044,698 - 178,057,616 (12,919)
query : 1 - 1,305 (1,305/1,305)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000489545
(
AK294921
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,044,732 - 178,054,053 (9,322)
query : 1 - 1,316 (1,316/1,316)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000619469 (
ENST00000520126
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,044,732 - 178,054,053 (9,322)
query : 1 - 1,316 (1,316/1,316)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000621849 (
ENST00000522556
)
(Dual specificity protein kinase CLK4; EC=2.7.12.1; CDC-like kinase 4;)
genome : 178,045,695 - 178,054,113 (8,419)
query : 1 - 1,249 (1,249/1,249)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0024806
HIT000429293
(
AK310427
)
(Dual specificity protein kinase CLK1; EC=2.7.12.1; CDC-like kinase 1;)
genome : 178,045,695 - 178,054,036 (8,342)
query : 1 - 1,163 (1,163/1,163)
4 exons
identity = 0.990
3'(1.000;0.987;1.000;0.989)5'
coverage = 1.000
EC number :
EC 2.7.12.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024806)
HIX0184041
pHIT000010324 ( pHIT000010324 )
Representative transcript
(Conserved hypothetical protein.)
genome : 177,398,317 - 177,399,282 (966)
query : 1 - 966 (966/966)
1 exon
InterPro :
IPR013907 : Sds3-like
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0184041)
CAGE tag :
H05BA12F0702,H08BA01C2106
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC062176
Tetraodon
sp. (Tetraodon) : CR635614
Oryzias
sp. (Medaka) : ENSORLT00000001422
Takifugu
sp. (Fugu) : SINFRUT00000157065
Macaca
sp. (Macaque) : XR_011319
HIX0005476
pHIT000103997 ( pHIT000103997 )
(Conserved hypothetical protein.)
genome : 177,614,088 - 177,632,656 (18,569)
query : 1 - 327 (327/327)
2 exons
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0005476)
CAGE tag :
T05F0A93EE11
AC139795.3
177000001-177077070 F +
NCBI
AC138819.3
177077071-177147647 F -
NCBI
AC140125.3
177147648-177292465 F -
NCBI
AC106795.3
177292466-177396511 F -
NCBI
AC136940.2
177396512-177456544 F -
NCBI
AC136632.3
177456545-177658032 F +
NCBI
AC136601.2
177658033-177781452 F -
NCBI
AC093290.4
177781453-177789424 F +
NCBI
AC008659.5
177789425-177974007 F +
NCBI
AC022096.7
177974008-178114335 F +
NCBI
AC113348.2
178114336-178194934 F -
NCBI
AC126915.2
178194935-178327387 F -
NCBI
AC104117.2
178327388-178522967 F +
NCBI
AC010216.8
178522968-178600000 F -
NCBI