bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0033207
HIT000549594 (
ENST00000451660
)
(Non-protein coding transcript.)
genome : 125,899,713 - 126,070,332 (170,620)
query : 1 - 708 (708/708)
5 exons
identity = 0.999
3'(0.988;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033207)
HIX0033207
HIT000525786 (
ENST00000427852
)
(Conserved hypothetical protein.)
genome : 125,899,713 - 126,066,174 (166,462)
query : 1 - 476 (476/476)
5 exons
identity = 0.998
3'(0.988;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 14.5, nucl 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033207)
HIX0033199
HIT000093662
(
BC035066
)
Representative transcript
(Conserved hypothetical protein.)
genome : 125,995,499 - 126,041,364 (45,866)
query : 6 - 2,970 (2,965/2,986)
4 exons
identity = 0.998
5'(1.000;1.000;0.999)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033199)
HIX0033199
HIT000725575 (
NR_038906
)
(Conserved hypothetical protein.)
genome : 125,995,499 - 126,041,364 (45,866)
query : 1 - 2,963 (2,963/2,979)
4 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033199)
HIX0033199
HIT000521142 (
ENST00000423208
)
(Hypothetical short protein.)
genome : 125,995,499 - 126,039,244 (43,746)
query : 1 - 843 (843/843)
4 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033199)
HIX0033207
HIT000094281
(
BC036196
)
Representative transcript
(Conserved hypothetical protein.)
genome : 126,039,387 - 126,070,336 (30,950)
query : 1 - 2,630 (2,630/2,645)
2 exons
identity = 0.998
3'(0.999;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 3.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033207)
HIX0033207
HIT000530055 (
ENST00000432121
)
(Non-protein coding transcript.)
genome : 126,041,489 - 126,070,332 (28,844)
query : 1 - 524 (524/524)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033207)
HIX0006197
HIT000498514
(
AK303890
)
(Hairy/enhancer-of-split related with YRPW motif protein 2; Cardiovascular helix-loop-helix factor 1; hCHF1; Class B basic helix-loop-helix protein 32; bHLHb32; HES-related repressor protein 2; Hairy and enhancer of split-related protein 2; HESR-2; Hairy-related transcription factor 2; HRT-2; hHRT2; Protein gridlock homolog;)
genome : 126,068,780 - 126,081,210 (12,431)
query : 4 - 1,289 (1,286/1,289)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.998
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006197)
HIX0006197
HIT000349645 (
ENST00000368365
)
(Hairy/enhancer-of-split related with YRPW motif protein 2; Cardiovascular helix-loop-helix factor 1; hCHF1; Class B basic helix-loop-helix protein 32; bHLHb32; HES-related repressor protein 2; Hairy and enhancer of split-related protein 2; HESR-2; Hairy-related transcription factor 2; HRT-2; hHRT2; Protein gridlock homolog;)
genome : 126,068,810 - 126,082,415 (13,606)
query : 1 - 2,461 (2,461/2,461)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006197)
HIX0006197
HIT000349644 (
ENST00000368364
)
(Hairy/enhancer-of-split related with YRPW motif protein 2; Cardiovascular helix-loop-helix factor 1; hCHF1; Class B basic helix-loop-helix protein 32; bHLHb32; HES-related repressor protein 2; Hairy and enhancer of split-related protein 2; HESR-2; Hairy-related transcription factor 2; HRT-2; hHRT2; Protein gridlock homolog;)
genome : 126,070,726 - 126,082,415 (11,690)
query : 1 - 2,678 (2,678/2,678)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006197)
HIX0006197
HIT000204040 (
NM_012259
)
(Hairy/enhancer-of-split related with YRPW motif protein 2; Cardiovascular helix-loop-helix factor 1; hCHF1; Class B basic helix-loop-helix protein 32; bHLHb32; HES-related repressor protein 2; Hairy and enhancer of split-related protein 2; HESR-2; Hairy-related transcription factor 2; HRT-2; hHRT2; Protein gridlock homolog;)
genome : 126,070,732 - 126,082,415 (11,684)
query : 1 - 2,672 (2,672/2,672)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006197)
HIX0006197
HIT000072461
(
AF173901
)
(Hairy/enhancer-of-split related with YRPW motif protein 2; Cardiovascular helix-loop-helix factor 1; hCHF1; Class B basic helix-loop-helix protein 32; bHLHb32; HES-related repressor protein 2; Hairy and enhancer of split-related protein 2; HESR-2; Hairy-related transcription factor 2; HRT-2; hHRT2; Protein gridlock homolog;)
genome : 126,070,769 - 126,081,084 (10,316)
query : 6 - 1,309 (1,304/1,331)
5 exons
identity = 0.997
5'(0.983;1.000;1.000;1.000;1.000)3'
coverage = 0.980
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006197)
HIX0006197
HIT000074646
(
AF232238
)
(Hairy/enhancer-of-split related with YRPW motif protein 2; Cardiovascular helix-loop-helix factor 1; hCHF1; Class B basic helix-loop-helix protein 32; bHLHb32; HES-related repressor protein 2; Hairy and enhancer of split-related protein 2; HESR-2; Hairy-related transcription factor 2; HRT-2; hHRT2; Protein gridlock homolog;)
genome : 126,070,819 - 126,081,081 (10,263)
query : 7 - 1,257 (1,251/1,257)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.995
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006197)
HIX0006197
HIT000422740
(
AK289943
)
(Hairy/enhancer-of-split related with YRPW motif protein 2; Cardiovascular helix-loop-helix factor 1; hCHF1; Class B basic helix-loop-helix protein 32; bHLHb32; HES-related repressor protein 2; Hairy and enhancer of split-related protein 2; HESR-2; Hairy-related transcription factor 2; HRT-2; hHRT2; Protein gridlock homolog;)
genome : 126,070,814 - 126,081,497 (10,684)
query : 1 - 1,672 (1,672/1,672)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006197)
HIX0006197
HIT000059423
(
AB044755
)
(Hairy/enhancer-of-split related with YRPW motif protein 2; Cardiovascular helix-loop-helix factor 1; hCHF1; Class B basic helix-loop-helix protein 32; bHLHb32; HES-related repressor protein 2; Hairy and enhancer of split-related protein 2; HESR-2; Hairy-related transcription factor 2; HRT-2; hHRT2; Protein gridlock homolog;)
genome : 126,070,827 - 126,081,085 (10,259)
query : 1 - 1,247 (1,247/1,247)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006197)
HIX0006197
HIT000033391
(
BC007707
)
(Hairy/enhancer-of-split related with YRPW motif protein 2; Cardiovascular helix-loop-helix factor 1; hCHF1; Class B basic helix-loop-helix protein 32; bHLHb32; HES-related repressor protein 2; Hairy and enhancer of split-related protein 2; HESR-2; Hairy-related transcription factor 2; HRT-2; hHRT2; Protein gridlock homolog;)
genome : 126,070,834 - 126,081,082 (10,249)
query : 1 - 1,237 (1,237/1,256)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006197)
HIX0006197
HIT000074762
(
AF237949
)
(Hairy/enhancer-of-split related with YRPW motif protein 2; Cardiovascular helix-loop-helix factor 1; hCHF1; Class B basic helix-loop-helix protein 32; bHLHb32; HES-related repressor protein 2; Hairy and enhancer of split-related protein 2; HESR-2; Hairy-related transcription factor 2; HRT-2; hHRT2; Protein gridlock homolog;)
genome : 126,070,856 - 126,081,463 (10,608)
query : 1 - 1,596 (1,596/1,596)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006197)
HIX0006197
HIT000245933
(
AJ249545
)
Representative transcript
(Hairy/enhancer-of-split related with YRPW motif protein 2; Cardiovascular helix-loop-helix factor 1; hCHF1; Class B basic helix-loop-helix protein 32; bHLHb32; HES-related repressor protein 2; Hairy and enhancer of split-related protein 2; HESR-2; Hairy-related transcription factor 2; HRT-2; hHRT2; Protein gridlock homolog;)
genome : 126,070,873 - 126,082,417 (11,545)
query : 1 - 2,533 (2,533/2,533)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006197)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173613
Mus
sp. (Mouse) : AF172287
Danio
sp. (Zebrafish) : AF237948
Rattus
sp. (Rat) : AY059382
Equus
sp. (Horse) : ENSECAT00000014779
Oryzias
sp. (Medaka) : ENSORLT00000010378
Pongo
sp. (Orangutan) : ENSPPYT00000019772
Tetraodon
sp. (Tetraodon) : GSTENT00034074001
Takifugu
sp. (Fugu) : SINFRUT00000145180
Monodelphis
sp. (Opossum) : XM_001369616
Gallus
sp. (Chicken) : XM_419754
Pan
sp. (Chimpanzee) : XM_527497
Canis
sp. (Dog) : XM_541232
Bos
sp. (Cow) : XM_581531
HIX0006197
HIT000077019
(
AF311884
)
(Hairy/enhancer-of-split related with YRPW motif protein 2; Cardiovascular helix-loop-helix factor 1; hCHF1; Class B basic helix-loop-helix protein 32; bHLHb32; HES-related repressor protein 2; Hairy and enhancer of split-related protein 2; HESR-2; Hairy-related transcription factor 2; HRT-2; hHRT2; Protein gridlock homolog;)
genome : 126,070,923 - 126,080,948 (10,026)
query : 1 - 1,014 (1,014/1,014)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006197)
HIX0006197
HIT000266803
(
BT020067
)
(Hairy/enhancer-of-split related with YRPW motif protein 2; Cardiovascular helix-loop-helix factor 1; hCHF1; Class B basic helix-loop-helix protein 32; bHLHb32; HES-related repressor protein 2; Hairy and enhancer of split-related protein 2; HESR-2; Hairy-related transcription factor 2; HRT-2; hHRT2; Protein gridlock homolog;)
genome : 126,070,923 - 126,080,947 (10,025)
query : 1 - 1,013 (1,013/1,014)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006197)
HIX0006197
HIT000266804
(
BT020068
)
(Hairy/enhancer-of-split related with YRPW motif protein 2; Cardiovascular helix-loop-helix factor 1; hCHF1; Class B basic helix-loop-helix protein 32; bHLHb32; HES-related repressor protein 2; Hairy and enhancer of split-related protein 2; HESR-2; Hairy-related transcription factor 2; HRT-2; hHRT2; Protein gridlock homolog;)
genome : 126,070,923 - 126,080,947 (10,025)
query : 1 - 1,013 (1,013/1,014)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006197)
HIX0216840
HIT000094422
(
BC036461
)
(Nuclear receptor coactivator 7 isoform 2.)
genome : 126,112,086 - 126,205,465 (93,380)
query : 6 - 2,663 (2,658/2,678)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.998
InterPro :
IPR018392 : LysM domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 18.5, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216840)
HIX0216840
HIT000515428 (
ENST00000417494
)
(LysM domain containing protein.)
genome : 126,112,086 - 126,202,349 (90,264)
query : 1 - 765 (765/765)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 18, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216840)
HIX0216840
HIT000551236 (
ENST00000453302
)
(Conserved hypothetical protein.)
genome : 126,112,086 - 126,176,386 (64,301)
query : 1 - 581 (581/581)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto 10, extr 5, mito 5, cyto_pero 5,
cyto_plas 5, cyto_golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216840)
HIX0216840
HIT000328493
(
AB074157
)
Representative transcript
(Nuclear receptor coactivator 7 isoform 3.)
genome : 126,112,109 - 126,207,315 (95,207)
query : 1 - 1,879 (1,879/1,879)
8 exons
identity = 0.998
5'(1.000;1.000;0.995;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR018392 : LysM domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, nucl 17.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216840)
HIX0165652
HIT000526941 (
ENST00000429007
)
(Hypothetical short protein.)
genome : 126,119,002 - 126,140,004 (21,003)
query : 1 - 501 (501/501)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165652)
HIX0216840
HIT000526252 (
ENST00000428318
)
(Conserved hypothetical protein.)
genome : 126,131,281 - 126,176,386 (45,106)
query : 1 - 548 (548/548)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto 10, extr 5, mito 5, cyto_pero 5,
cyto_plas 5, cyto_golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216840)
HIX0216840
HIT000517594 (
ENST00000419660
)
(Conserved hypothetical protein.)
genome : 126,136,364 - 126,196,114 (59,751)
query : 1 - 488 (488/488)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216840)
HIX0216840
HIT000264601
(
BC071782
)
(Nuclear receptor coactivator 7 isoform 2.)
genome : 126,136,364 - 126,177,237 (40,874)
query : 1 - 1,259 (1,259/1,288)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, nucl 9, mito 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216840)
HIX0216840
HIT000591332 (
ENST00000487635
)
(Conserved hypothetical protein.)
genome : 126,136,364 - 126,176,736 (40,373)
query : 1 - 758 (758/758)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, nucl 9, mito 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216840)
HIX0165491
HIT000508510 (
ENST00000410513
)
(Hypothetical short protein.)
genome : 126,196,314 - 126,196,644 (331)
query : 1 - 331 (331/331)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165491)
HIX0216778
HIT000087270
(
BC009399
)
(Conserved hypothetical protein.)
genome : 126,210,168 - 126,211,130 (963)
query : 1 - 963 (963/991)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 2.5, cyto_golg 2.5, golg 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216778)
HIX0216778
HIT000247830
(
AJ420542
)
Representative transcript
(Nuclear receptor coactivator 7 isoform 3.)
genome : 126,210,908 - 126,252,253 (41,346)
query : 10 - 3,465 (3,456/3,504)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 0.989
InterPro :
IPR006571 : TLDc domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 16.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216778)
HIX0216778
HIT000531505 (
ENST00000433571
)
(TLDc domain containing protein.)
genome : 126,221,055 - 126,248,904 (27,850)
query : 1 - 636 (636/636)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216778)
HIX0216778
HIT000331798
(
AY364254
)
(Nuclear receptor coactivator 7 isoform 3.)
genome : 126,236,478 - 126,249,403 (12,926)
query : 1 - 608 (608/616)
5 exons
identity = 0.992
5'(1.000;0.992;1.000;1.000;0.952)3'
coverage = 0.987
InterPro :
IPR006571 : TLDc domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216778)
HIX0216778
HIT000656590 (
NM_001199622
)
(TLDc domain containing protein.)
genome : 126,240,370 - 126,253,176 (12,807)
query : 1 - 4,052 (4,052/4,052)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 16, nucl 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216778)
HIX0216778
HIT000536429 (
ENST00000438495
)
(TLDc domain containing protein.)
genome : 126,240,451 - 126,252,257 (11,807)
query : 1 - 3,052 (3,052/3,052)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 16, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216778)
HIX0216778
HIT000542062 (
ENST00000444128
)
(TLDc domain containing protein.)
genome : 126,240,451 - 126,252,257 (11,807)
query : 1 - 2,978 (2,978/2,978)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 13.5, nucl 12.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216778)
HIX0216778
HIT000546038 (
ENST00000448104
)
(TLDc domain containing protein.)
genome : 126,240,451 - 126,249,393 (8,943)
query : 1 - 567 (567/567)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216778)
HIX0216778
HIT000019561
(
AK094706
)
(Nuclear receptor coactivator 7 isoform 4.)
genome : 126,240,478 - 126,252,254 (11,777)
query : 1 - 3,023 (3,023/3,023)
6 exons
identity = 0.998
5'(1.000;0.992;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR006571 : TLDc domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 16, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216778)
HIX0216778
HIT000095924
(
BC039853
)
(Conserved hypothetical protein.)
genome : 126,250,999 - 126,252,254 (1,256)
query : 1 - 1,256 (1,256/1,272)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 10, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216778)
HIX0200852
HIT000212449 (
NM_138571
)
(Histidine triad (HIT) protein family protein.)
genome : 126,277,861 - 126,301,388 (23,528)
query : 1 - 3,378 (3,378/3,396)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.-.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, nucl 3, cyto_mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200852)
HIX0200852
HIT000055875
(
BX647228
)
(Histidine triad nucleotide-binding protein 3; HINT-3; EC=3.-.-.-;)
genome : 126,277,871 - 126,301,388 (23,518)
query : 1 - 3,370 (3,370/3,532)
5 exons
identity = 0.997
5'(0.998;1.000;1.000;0.992;0.997)3'
coverage = 1.000
EC number :
EC 3.-.-.-
InterPro :
IPR001310 : Histidine triad (HIT) protein
IPR011146 : HIT-like domain
GO :
0003824 : Molecular Function : catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200852)
HIX0200852
HIT000428723
(
AK309857
)
(Histidine triad nucleotide-binding protein 3.)
genome : 126,277,920 - 126,299,230 (21,311)
query : 1 - 871 (871/871)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.-.-.-
InterPro :
IPR001310 : Histidine triad (HIT) protein
IPR011146 : HIT-like domain
GO :
0003824 : Molecular Function : catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 12.5, cyto 11.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200852)
HIX0200852
HIT000247865
(
AJ420577
)
(Histidine triad nucleotide-binding protein 3; HINT-3; EC=3.-.-.-;)
genome : 126,277,934 - 126,299,200 (21,267)
query : 10 - 1,126 (1,117/1,155)
5 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000)3'
coverage = 0.992
EC number :
EC 3.-.-.-
InterPro :
IPR001310 : Histidine triad (HIT) protein
IPR011146 : HIT-like domain
GO :
0003824 : Molecular Function : catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, nucl 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200852)
HIX0200852
HIT000104214 (
ENST00000229633
)
(Histidine triad (HIT) protein family protein.)
genome : 126,277,927 - 126,301,387 (23,461)
query : 1 - 3,311 (3,311/3,311)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, nucl 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200852)
HIX0200852
HIT000037280
(
BC015732
)
Representative transcript
(Histidine triad nucleotide-binding protein 3; HINT-3; EC=3.-.-.-;)
genome : 126,277,927 - 126,299,200 (21,274)
query : 1 - 1,124 (1,124/1,143)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.-.-.-
InterPro :
IPR001310 : Histidine triad (HIT) protein
IPR011146 : HIT-like domain
GO :
0003824 : Molecular Function : catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, nucl 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200852)
HIX0200852
HIT000014295
(
AK057688
)
(Histidine triad nucleotide-binding protein 3; HINT-3; EC=3.-.-.-;)
genome : 126,277,932 - 126,300,735 (22,804)
query : 2 - 2,657 (2,656/2,657)
5 exons
identity = 0.997
5'(0.995;1.000;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 3.-.-.-
InterPro :
IPR001310 : Histidine triad (HIT) protein
IPR011146 : HIT-like domain
GO :
0003824 : Molecular Function : catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, nucl 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200852)
HIX0200852
HIT000083510
(
AY035388
)
(Histidine triad nucleotide-binding protein 3; HINT-3; EC=3.-.-.-;)
genome : 126,277,936 - 126,299,572 (21,637)
query : 1 - 1,486 (1,486/1,504)
5 exons
identity = 0.997
5'(0.997;1.000;1.000;1.000;0.996)3'
coverage = 0.999
EC number :
EC 3.-.-.-
InterPro :
IPR001310 : Histidine triad (HIT) protein
IPR011146 : HIT-like domain
GO :
0003824 : Molecular Function : catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, nucl 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200852)
HIX0200852
HIT000083509
(
AY035387
)
(Histidine triad nucleotide-binding protein 3; HINT-3; EC=3.-.-.-;)
genome : 126,277,936 - 126,299,201 (21,266)
query : 1 - 1,116 (1,116/1,134)
5 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.-.-.-
InterPro :
IPR001310 : Histidine triad (HIT) protein
IPR011146 : HIT-like domain
GO :
0003824 : Molecular Function : catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, nucl 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200852)
HIX0200852
HIT000254900
(
AY486460
)
(Histidine triad nucleotide-binding protein 3; HINT-3; EC=3.-.-.-;)
genome : 126,278,124 - 126,298,822 (20,699)
query : 1 - 549 (549/549)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.-.-.-
InterPro :
IPR001310 : Histidine triad (HIT) protein
IPR011146 : HIT-like domain
GO :
0003824 : Molecular Function : catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, nucl 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200852)
HIX0200852
HIT000254901
(
AY486461
)
(Histidine triad nucleotide-binding protein 3; HINT-3; EC=3.-.-.-;)
genome : 126,278,124 - 126,298,822 (20,699)
query : 1 - 549 (549/549)
5 exons
identity = 0.998
5'(0.995;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.-.-.-
InterPro :
IPR001310 : Histidine triad (HIT) protein
IPR011146 : HIT-like domain
GO :
0003824 : Molecular Function : catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, nucl 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200852)
HIX0200852
HIT000013472
(
AK056858
)
(Conserved hypothetical protein.)
genome : 126,299,534 - 126,301,387 (1,854)
query : 1 - 1,857 (1,857/1,857)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, cyto 11, nucl 3, mito 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200852)
HIX0207525
HIT000615514 (
ENST00000516111
)
(Non-protein coding transcript.)
genome : 126,300,958 - 126,301,080 (123)
query : 1 - 123 (123/123)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207525)
HIX0006199
HIT000365992 (
NM_001031712
)
(tRNA (guanine(10)-N2)-methyltransferase homolog; EC=2.1.1.-; tRNA guanosine-2'-O-methyltransferase TRM11 homolog;)
genome : 126,307,576 - 126,360,419 (52,844)
query : 1 - 1,950 (1,950/1,967)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 10, extr 4, pero 3, nucl 2, E.R. 2,
extr_plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0006199
HIT000128920 (
ENST00000334379
)
(tRNA (guanine(10)-N2)-methyltransferase homolog; EC=2.1.1.-; tRNA guanosine-2'-O-methyltransferase TRM11 homolog;)
genome : 126,307,576 - 126,360,418 (52,843)
query : 1 - 1,949 (1,949/1,949)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 10, extr 4, pero 3, nucl 2, E.R. 2,
extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0006199
HIT000259603
(
BC056878
)
(tRNA (guanine(10)-N2)-methyltransferase homolog; EC=2.1.1.-; tRNA guanosine-2'-O-methyltransferase TRM11 homolog;)
genome : 126,307,576 - 126,360,026 (52,451)
query : 1 - 1,557 (1,557/1,571)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR000241 : Putative RNA methylase domain
IPR002052 : DNA methylase, N-6 adenine-specific, conserved site
IPR002296 : N6 adenine-specific DNA methyltransferase, N12 class
IPR016691 : tRNA guanosine-2'-O-methyltransferase, TRM11
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
GO :
0003676 : Molecular Function : nucleic acid binding
0008168 : Molecular Function : methyltransferase activity
0032259 : Biological Process : methylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 11, cyto_mito 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0006199
HIT000548292 (
ENST00000450358
)
(TRNA (guanine(10)-N2)-methyltransferase homolog.)
genome : 126,307,576 - 126,329,618 (22,043)
query : 1 - 881 (881/895)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.984
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, mito 8, cyto_nucl 6.5, extr 5, E.R._mito 5,
pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0006199
HIT000243732
(
AF532977
)
Representative transcript
(tRNA (guanine(10)-N2)-methyltransferase homolog; EC=2.1.1.-; tRNA guanosine-2'-O-methyltransferase TRM11 homolog;)
genome : 126,307,611 - 126,360,419 (52,809)
query : 1 - 1,915 (1,915/1,932)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR000241 : Putative RNA methylase domain
IPR002052 : DNA methylase, N-6 adenine-specific, conserved site
IPR002296 : N6 adenine-specific DNA methyltransferase, N12 class
IPR016691 : tRNA guanosine-2'-O-methyltransferase, TRM11
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
GO :
0003676 : Molecular Function : nucleic acid binding
0008168 : Molecular Function : methyltransferase activity
0032259 : Biological Process : methylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 10, extr 4, pero 3, nucl 2, E.R. 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF532978
Takifugu
sp. (Fugu) : AF532980
Danio
sp. (Zebrafish) : AF532981
Mus
sp. (Mouse) : AK010722
Gallus
sp. (Chicken) : AY139090
Bos
sp. (Cow) : BC122733
Pongo
sp. (Orangutan) : CR859531
Canis
sp. (Dog) : ENSCAFT00000035266
Equus
sp. (Horse) : ENSECAT00000019044
Macaca
sp. (Macaque) : ENSMMUT00000006105
Monodelphis
sp. (Opossum) : ENSMODT00000022431
Oryzias
sp. (Medaka) : ENSORLT00000007264
Tetraodon
sp. (Tetraodon) : GSTENT00035363001
Pan
sp. (Chimpanzee) : XM_001166097
Gallus
sp. (Chicken) : XM_001236018
HIX0006199
HIT000585498 (
ENST00000481529
)
(tRNA (guanine(10)-N2)-methyltransferase homolog; EC=2.1.1.-; tRNA guanosine-2'-O-methyltransferase TRM11 homolog;)
genome : 126,307,625 - 126,360,937 (53,313)
query : 1 - 2,409 (2,409/2,409)
13 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.927;0.992;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, mito 10, cyto_mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0006199
HIT000349612 (
ENST00000368332
)
(tRNA (guanine(10)-N2)-methyltransferase homolog; EC=2.1.1.-; tRNA guanosine-2'-O-methyltransferase TRM11 homolog;)
genome : 126,307,625 - 126,360,422 (52,798)
query : 1 - 1,889 (1,889/1,889)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, mito 10, cyto_mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0006199
HIT000583794 (
ENST00000479748
)
(TRNA (guanine(10)-N2)-methyltransferase homolog.)
genome : 126,307,625 - 126,360,422 (52,798)
query : 1 - 2,093 (2,093/2,093)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, mito 8, cyto_nucl 6.5, extr 5, E.R._mito 5,
pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0006199
HIT000566032 (
ENST00000461129
)
(TRNA (guanine(10)-N2)-methyltransferase homolog.)
genome : 126,307,625 - 126,329,626 (22,002)
query : 1 - 758 (758/758)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 8, cyto_nucl 7.5, mito 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0006199
HIT000002194
(
AF182423
)
(TRNA (guanine(10)-N2)-methyltransferase homolog.)
genome : 126,307,631 - 126,360,419 (52,789)
query : 1 - 2,080 (2,080/2,103)
15 exons
identity = 0.997
5'(0.978;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;0.990;1.000;1.000;1.000;0.992;
1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, mito 8, cyto_nucl 6.5, extr 5, E.R._mito 5,
pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0006199
HIT000427517
(
AK308651
)
(TRNA (guanine(10)-N2)-methyltransferase homolog.)
genome : 126,307,661 - 126,332,304 (24,644)
query : 1 - 1,030 (1,030/1,030)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR000241 : Putative RNA methylase domain
IPR016691 : tRNA guanosine-2'-O-methyltransferase, TRM11
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
GO :
0008168 : Molecular Function : methyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, mito 8, cyto_nucl 5.5, E.R._mito 5.5,
extr 5, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0006199
HIT000572678 (
ENST00000468097
)
(TRNA (guanine(10)-N2)-methyltransferase homolog.)
genome : 126,307,672 - 126,329,896 (22,225)
query : 1 - 992 (992/1,009)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.989)3'
coverage = 0.983
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12.5, mito_nucl 8.83333, extr 7,
cyto_nucl 4.83333, cyto 4.5, extr_plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0006199
HIT000577613 (
ENST00000473273
)
(TRNA (guanine(10)-N2)-methyltransferase homolog.)
genome : 126,307,697 - 126,319,280 (11,584)
query : 1 - 258 (258/258)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto_nucl 10, nucl 8, cyto 8, mito 5,
extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0006199
HIT000544615 (
ENST00000446681
)
(TRNA (guanine(10)-N2)-methyltransferase homolog.)
genome : 126,307,699 - 126,320,671 (12,973)
query : 1 - 657 (657/657)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15.5, cyto_plas 11.8333, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0006199
HIT000542055 (
ENST00000444121
)
(TRNA (guanine(10)-N2)-methyltransferase homolog.)
genome : 126,307,699 - 126,319,776 (12,078)
query : 1 - 617 (617/617)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.5, nucl 6, mito 4, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0006199
HIT000593519 (
ENST00000489934
)
(TRNA (guanine(10)-N2)-methyltransferase homolog.)
genome : 126,308,060 - 126,319,244 (11,185)
query : 1 - 418 (418/418)
3 exons
identity = 0.964
5'(0.956;0.974;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 9, cyto 8.5, extr 8, cyto_nucl 7.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0006199
HIT000551927 (
ENST00000453993
)
(TRNA (guanine(10)-N2)-methyltransferase homolog.)
genome : 126,320,686 - 126,334,231 (13,546)
query : 1 - 509 (509/509)
5 exons
identity = 0.990
5'(1.000;1.000;1.000;0.939;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 11.5, mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0006199
HIT000570974 (
ENST00000466316
)
(TRNA (guanine(10)-N2)-methyltransferase homolog.)
genome : 126,327,988 - 126,359,899 (31,912)
query : 1 - 729 (729/729)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, E.R. 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006199)
HIX0165772
HIT000542163 (
ENST00000444229
)
(Hypothetical short protein.)
genome : 126,498,339 - 126,523,385 (25,047)
query : 1 - 583 (583/583)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 8, cyto_nucl 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165772)
HIX0123075
HIT000538268 (
ENST00000440334
)
(PKC-activated phosphatase-1 inhibitor family protein.)
genome : 126,579,067 - 126,579,501 (435)
query : 1 - 435 (435/435)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 7, cyto_nucl 6.5, cyto_plas 6, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123075)
HIX0025142
HIT000046633
(
AK126760
)
Representative transcript
(Conserved hypothetical protein.)
genome : 126,580,160 - 126,583,822 (3,663)
query : 1 - 3,663 (3,663/3,663)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito_nucl 9.33333, nucl 9, mito 9, cyto_nucl 8.66667,
extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025142)
HIX0021708
HIT000027147
(
AL832235
)
(Centromere protein W.)
genome : 126,660,935 - 126,804,466 (143,532)
query : 1 - 3,543 (3,543/3,561)
4 exons
identity = 0.997
5'(0.998;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR009072 : Histone-fold
IPR028847 : Centromere protein W
GO :
0003677 : Molecular Function : DNA binding
0007067 : Biological Process : mitotic nuclear division
0046982 : Molecular Function : protein heterodimerization activity
0051382 : Biological Process : kinetochore assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 13, cyto 10, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021708)
HIX0021708
HIT000095817
(
BC039556
)
Representative transcript
(Centromere protein W; CENP-W; Cancer-up-regulated gene 2 protein;)
genome : 126,661,253 - 126,669,752 (8,500)
query : 1 - 548 (548/567)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR009072 : Histone-fold
IPR028847 : Centromere protein W
GO :
0003677 : Molecular Function : DNA binding
0007067 : Biological Process : mitotic nuclear division
0046982 : Molecular Function : protein heterodimerization activity
0051382 : Biological Process : kinetochore assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11.5, mito 9, cyto_mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021708)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK141272
Rattus
sp. (Rat) : BC129114
Gallus
sp. (Chicken) : CR385186
Bos
sp. (Cow) : ENSBTAT00000038095
Equus
sp. (Horse) : ENSECAT00000021374
Pongo
sp. (Orangutan) : ENSPPYT00000019776
Macaca
sp. (Macaque) : XM_001107096
Pan
sp. (Chimpanzee) : XM_001166235
HIX0021708
HIT000316906 (
NM_001012507
)
(Centromere protein W; CENP-W; Cancer-up-regulated gene 2 protein;)
genome : 126,661,253 - 126,669,754 (8,502)
query : 1 - 550 (550/567)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11.5, mito 9, cyto_mito 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021708)
HIX0021708
HIT000258854
(
AY902475
)
(Centromere protein W; CENP-W; Cancer-up-regulated gene 2 protein;)
genome : 126,661,275 - 126,669,748 (8,474)
query : 10 - 531 (522/531)
3 exons
identity = 0.998
5'(0.996;1.000;1.000)3'
coverage = 0.983
InterPro :
IPR009072 : Histone-fold
IPR028847 : Centromere protein W
GO :
0003677 : Molecular Function : DNA binding
0007067 : Biological Process : mitotic nuclear division
0046982 : Molecular Function : protein heterodimerization activity
0051382 : Biological Process : kinetochore assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11.5, mito 9, cyto_mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021708)
HIX0021708
HIT000260689
(
BC062798
)
(Centromere protein W; CENP-W; Cancer-up-regulated gene 2 protein;)
genome : 126,661,294 - 126,669,754 (8,461)
query : 5 - 513 (509/596)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.992
InterPro :
IPR009072 : Histone-fold
IPR028847 : Centromere protein W
GO :
0003677 : Molecular Function : DNA binding
0007067 : Biological Process : mitotic nuclear division
0046982 : Molecular Function : protein heterodimerization activity
0051382 : Biological Process : kinetochore assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11.5, mito 9, cyto_mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021708)
HIX0021708
HIT000098304
(
BC046178
)
(Centromere protein W; CENP-W; Cancer-up-regulated gene 2 protein;)
genome : 126,661,307 - 126,669,749 (8,443)
query : 5 - 495 (491/514)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.992
InterPro :
IPR009072 : Histone-fold
IPR028847 : Centromere protein W
GO :
0003677 : Molecular Function : DNA binding
0007067 : Biological Process : mitotic nuclear division
0046982 : Molecular Function : protein heterodimerization activity
0051382 : Biological Process : kinetochore assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11.5, mito 9, cyto_mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021708)
HIX0021708
HIT000089469
(
BC017928
)
(Centromere protein W; CENP-W; Cancer-up-regulated gene 2 protein;)
genome : 126,661,320 - 126,669,749 (8,430)
query : 3 - 480 (478/512)
3 exons
identity = 0.998
5'(0.996;1.000;1.000)3'
coverage = 0.990
InterPro :
IPR009072 : Histone-fold
IPR028847 : Centromere protein W
GO :
0003677 : Molecular Function : DNA binding
0007067 : Biological Process : mitotic nuclear division
0046982 : Molecular Function : protein heterodimerization activity
0051382 : Biological Process : kinetochore assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11.5, mito 9, cyto_mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021708)
HIX0021708
HIT000349608 (
ENST00000368328
)
(Centromere protein W; CENP-W; Cancer-up-regulated gene 2 protein;)
genome : 126,661,320 - 126,670,021 (8,702)
query : 1 - 750 (750/750)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11.5, mito 9, cyto_mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021708)
HIX0021708
HIT000349605 (
ENST00000368325
)
(Centromere protein W; CENP-W; Cancer-up-regulated gene 2 protein;)
genome : 126,661,320 - 126,669,754 (8,435)
query : 1 - 528 (528/528)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto 11, extr 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021708)
HIX0021708
HIT000349606 (
ENST00000368326
)
(Centromere protein W; CENP-W; Cancer-up-regulated gene 2 protein;)
genome : 126,661,320 - 126,669,754 (8,435)
query : 1 - 443 (443/443)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021708)
HIX0025153
HIT000047345
(
AK127472
)
Representative transcript
(Conserved hypothetical protein.)
genome : 126,698,801 - 127,440,994 (742,194)
query : 1 - 3,571 (3,571/3,571)
10 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 6.5, extr 6, mito 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025153)
HIX0122986
HIT000470856 (
ENST00000384900
)
(Non-protein coding transcript.)
genome : 126,805,777 - 126,805,859 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0122986)
HIX0122986
HIT000658308 (
NR_030316
)
(Non-protein coding transcript.)
genome : 126,805,777 - 126,805,859 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0122986)
HIX0165158
HIT000504098 (
ENST00000402383
)
(Intermediate filament protein family protein.)
genome : 126,923,501 - 126,924,797 (1,297)
query : 1 - 1,297 (1,297/1,297)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 8.16667, nucl 7.5, cyto 5.5,
cyto_pero 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165158)
HIX0032940
HIT000265741
(
BC078182
)
Representative transcript
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 126,964,609 - 126,965,536 (928)
query : 94 - 1,022 (929/1,039)
1 exon
identity = 0.953
5'(0.953)3'
coverage = 0.909
InterPro :
IPR006797 : PRELI/MSF1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032940)
Ortholog candidate ( ->
Evola
)
Tetraodon
sp. (Tetraodon) : CR715120
Pan
sp. (Chimpanzee) : XR_022034
HIX0032940
HIT000604795_04 (
ENST00000504594
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 126,964,621 - 126,965,544 (924)
query : 7 - 886 (880/886)
2 exons
identity = 0.964
5'(0.967;0.960)3'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto_nucl 4.5, nucl 4, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032940)
HIX0032940
HIT000680287_02 (
ENST00000567272
)
(PRELI domain-containing protein 1, mitochondrial isoform 2 precursor.)
genome : 126,964,634 - 126,965,536 (903)
query : 1 - 903 (903/903)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_mito 10, cyto 9, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032940)
HIX0032940
HIT000504527 (
ENST00000403549
)
(PRELI domain-containing protein 1, mitochondrial isoform 2 precursor.)
genome : 126,964,786 - 126,965,445 (660)
query : 1 - 660 (660/660)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_mito 10, cyto 9, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032940)
HIX0032940
HIT000529525_03 (
ENST00000431591
)
(PRELI domain-containing protein 1, mitochondrial; 25 kDa protein of relevant evolutionary and lymphoid interest; Px19-like protein; Precursor;)
genome : 126,964,786 - 126,965,444 (659)
query : 1 - 659 (659/659)
1 exon
identity = 0.956
5'(0.956)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, mito 10, cyto_nucl 9.5, cyto 6, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032940)
HIX0165306
HIT000505112 (
ENST00000405151
)
(Ribosomal protein S4e, central region domain containing protein.)
genome : 127,004,181 - 127,004,992 (812)
query : 1 - 780 (780/780)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 13, cyto_nucl 8, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165306)
HIX0207427
eHIT000019854 ( ESTsASS_6_504 )
Representative transcript
(Non-protein coding transcript.)
genome : 127,170,330 - 127,202,061 (31,732)
query : 1 - 794 (794/794)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207427)
ESTs used for assembly :
BG221200
HIX0033161
HIT000090268
(
BC020857
)
Representative transcript
(Conserved hypothetical protein.)
genome : 127,206,068 - 127,207,563 (1,496)
query : 1 - 1,496 (1,496/1,525)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 7, extr_plas 7, nucl 6, cyto 6,
mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033161)
HIX0006200
HIT000310652 (
ENST00000356698
)
(R-spondin-3; Protein with TSP type-1 repeat; hPWTSR; Roof plate-specific spondin-3; hRspo3; Thrombospondin type-1 domain-containing protein 2; Precursor;)
genome : 127,439,749 - 127,518,441 (78,693)
query : 1 - 2,697 (2,697/2,697)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006200)
HIX0006200
HIT000039500
(
BC022367
)
Representative transcript
(R-spondin-3; Protein with TSP type-1 repeat; hPWTSR; Roof plate-specific spondin-3; hRspo3; Thrombospondin type-1 domain-containing protein 2; Precursor;)
genome : 127,439,819 - 127,517,993 (78,175)
query : 1 - 2,060 (2,060/2,089)
6 exons
identity = 0.997
5'(1.000;0.987;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR000884 : Thrombospondin, type 1 repeat
IPR006212 : Furin-like repeat
IPR009030 : Insulin-like growth factor binding protein, N-terminal
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006200)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : AB035930
Mus
sp. (Mouse) : AK076308
Bos
sp. (Cow) : BC114713
Gallus
sp. (Chicken) : CR406671
Monodelphis
sp. (Opossum) : ENSMODT00000022428
Oryzias
sp. (Medaka) : ENSORLT00000007234
Pongo
sp. (Orangutan) : ENSPPYT00000019778
Equus
sp. (Horse) : EU029662
Tetraodon
sp. (Tetraodon) : GSTENT00035366001
Takifugu
sp. (Fugu) : SINFRUT00000136059
Rattus
sp. (Rat) : XM_001059176
Macaca
sp. (Macaque) : XM_001106900
Pan
sp. (Chimpanzee) : XM_001166327
Canis
sp. (Dog) : XM_533492
HIX0006200
HIT000210879 (
NM_032784
)
(R-spondin-3; Protein with TSP type-1 repeat; hPWTSR; Roof plate-specific spondin-3; hRspo3; Thrombospondin type-1 domain-containing protein 2; Precursor;)
genome : 127,440,048 - 127,518,183 (78,136)
query : 1 - 2,140 (2,140/2,165)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006200)
HIX0006200
HIT000075050
(
AF251057
)
(R-spondin-3; Protein with TSP type-1 repeat; hPWTSR; Roof plate-specific spondin-3; hRspo3; Thrombospondin type-1 domain-containing protein 2; Precursor;)
genome : 127,440,056 - 127,518,441 (78,386)
query : 1 - 2,390 (2,390/2,390)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR000884 : Thrombospondin, type 1 repeat
IPR006212 : Furin-like repeat
IPR009030 : Insulin-like growth factor binding protein, N-terminal
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006200)
HIX0006200
HIT000349597 (
ENST00000368317
)
(R-spondin-3; Protein with TSP type-1 repeat; hPWTSR; Roof plate-specific spondin-3; hRspo3; Thrombospondin type-1 domain-containing protein 2; Precursor;)
genome : 127,440,183 - 127,518,910 (78,728)
query : 1 - 1,290 (1,290/1,290)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006200)
HIX0006200
HIT000433778
(
AK314912
)
(R-spondin-3; Protein with TSP type-1 repeat; hPWTSR; Roof plate-specific spondin-3; hRspo3; Thrombospondin type-1 domain-containing protein 2; Precursor;)
genome : 127,440,279 - 127,517,152 (76,874)
query : 3 - 880 (878/880)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;0.995;1.000)3'
coverage = 0.998
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR000884 : Thrombospondin, type 1 repeat
IPR006212 : Furin-like repeat
IPR009030 : Insulin-like growth factor binding protein, N-terminal
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006200)
HIX0006200
HIT000589551 (
ENST00000485757
)
(R-spondin-3; Protein with TSP type-1 repeat; hPWTSR; Roof plate-specific spondin-3; hRspo3; Thrombospondin type-1 domain-containing protein 2; Precursor;)
genome : 127,440,972 - 127,476,430 (35,459)
query : 1 - 526 (526/526)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3.5, cyto_nucl 3.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006200)
HIX0006200
HIT000067177
(
AF086298
)
(Hypothetical short protein.)
genome : 127,517,597 - 127,518,183 (587)
query : 1 - 587 (587/596)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 6, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006200)
HIX0006201
HIT000349594 (
ENST00000368314
)
(E3 ubiquitin-protein ligase RNF146; EC=6.3.2.-; Dactylidin; Iduna; RING finger protein 146;)
genome : 127,587,755 - 127,609,703 (21,949)
query : 1 - 2,369 (2,369/2,369)
3 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000581125 (
ENST00000476956
)
(E3 ubiquitin-protein ligase RNF146 isoform a.)
genome : 127,587,871 - 127,608,036 (20,166)
query : 1 - 884 (884/884)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000722721 (
NM_001242844
)
(E3 ubiquitin-protein ligase RNF146 isoform a.)
genome : 127,587,883 - 127,609,704 (21,822)
query : 1 - 2,649 (2,649/2,670)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000722724 (
NM_001242849
)
(E3 ubiquitin-protein ligase RNF146; EC=6.3.2.-; Dactylidin; Iduna; RING finger protein 146;)
genome : 127,587,883 - 127,609,704 (21,822)
query : 1 - 2,412 (2,412/2,433)
3 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000722727 (
NM_001242852
)
(E3 ubiquitin-protein ligase RNF146 isoform a.)
genome : 127,587,883 - 127,609,704 (21,822)
query : 1 - 2,629 (2,629/2,650)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000726260 (
NR_045102
)
(E3 ubiquitin-protein ligase RNF146 isoform a.)
genome : 127,587,883 - 127,609,704 (21,822)
query : 1 - 2,540 (2,540/2,561)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000210042 (
NM_030963
)
(E3 ubiquitin-protein ligase RNF146 isoform a.)
genome : 127,587,983 - 127,609,704 (21,722)
query : 1 - 2,379 (2,379/2,400)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000722722 (
NM_001242845
)
(E3 ubiquitin-protein ligase RNF146 isoform a.)
genome : 127,587,983 - 127,609,704 (21,722)
query : 1 - 2,498 (2,498/2,519)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000722723 (
NM_001242846
)
(E3 ubiquitin-protein ligase RNF146 isoform a.)
genome : 127,587,983 - 127,609,704 (21,722)
query : 1 - 2,411 (2,411/2,432)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000722725 (
NM_001242850
)
(E3 ubiquitin-protein ligase RNF146; EC=6.3.2.-; Dactylidin; Iduna; RING finger protein 146;)
genome : 127,587,983 - 127,609,704 (21,722)
query : 1 - 2,142 (2,142/2,163)
3 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000726261 (
NR_045103
)
(E3 ubiquitin-protein ligase RNF146 isoform a.)
genome : 127,587,983 - 127,609,704 (21,722)
query : 1 - 2,270 (2,270/2,291)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000310739 (
ENST00000356799
)
(E3 ubiquitin-protein ligase RNF146 isoform a.)
genome : 127,587,994 - 127,609,712 (21,719)
query : 1 - 2,267 (2,267/2,267)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000010830
(
AK027558
)
Representative transcript
(E3 ubiquitin-protein ligase RNF146; EC=6.3.2.-; Dactylidin; Iduna; RING finger protein 146;)
genome : 127,587,996 - 127,609,703 (21,708)
query : 3 - 2,130 (2,128/2,130)
3 exons
identity = 1.000
5'(1.000)3'
coverage = 0.999
EC number :
EC 6.3.2.-
InterPro :
IPR004170 : WWE domain
IPR017907 : Zinc finger, RING-type, conserved site
IPR018123 : WWE domain, subgroup
IPR018957 : Zinc finger, C3HC4 RING-type
GO :
0008270 : Molecular Function : zinc ion binding
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB220491
Danio
sp. (Zebrafish) : BC048897
Mus
sp. (Mouse) : BC050795
Rattus
sp. (Rat) : BC083675
Bos
sp. (Cow) : BC102139
Gallus
sp. (Chicken) : BX929276
Pongo
sp. (Orangutan) : CR858046
Oryzias
sp. (Medaka) : ENSORLT00000007219
Tetraodon
sp. (Tetraodon) : GSTENT00035368001
Takifugu
sp. (Fugu) : SINFRUT00000136062
Pan
sp. (Chimpanzee) : XM_001166747
Monodelphis
sp. (Opossum) : XM_001369683
Equus
sp. (Horse) : XM_001504242
Canis
sp. (Dog) : XM_533493
HIX0006201
HIT000598560 (
ENST00000495188
)
(Non-protein coding transcript.)
genome : 127,587,996 - 127,601,825 (13,830)
query : 1 - 525 (525/525)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000581909 (
ENST00000477776
)
(E3 ubiquitin-protein ligase RNF146 isoform a.)
genome : 127,588,009 - 127,607,994 (19,986)
query : 1 - 762 (762/762)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000025425
(
AL136829
)
(E3 ubiquitin-protein ligase RNF146 isoform a.)
genome : 127,588,020 - 127,609,503 (21,484)
query : 1 - 2,141 (2,141/2,158)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR004170 : WWE domain
IPR017907 : Zinc finger, RING-type, conserved site
IPR018123 : WWE domain, subgroup
IPR018957 : Zinc finger, C3HC4 RING-type
GO :
0008270 : Molecular Function : zinc ion binding
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000118418 (
ENST00000309649
)
(E3 ubiquitin-protein ligase RNF146 isoform a.)
genome : 127,588,020 - 127,609,502 (21,483)
query : 1 - 2,140 (2,140/2,140)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000593134 (
ENST00000489534
)
(E3 ubiquitin-protein ligase RNF146 isoform b.)
genome : 127,588,028 - 127,608,098 (20,071)
query : 1 - 610 (610/610)
3 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006201
HIT000584463 (
ENST00000480444
)
(E3 ubiquitin-protein ligase RNF146 isoform a.)
genome : 127,588,033 - 127,608,048 (20,016)
query : 1 - 843 (843/843)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006201)
HIX0006198
HIT000656587 (
NM_001199619
)
(Nuclear receptor coactivator 7; 140 kDa estrogen receptor-associated protein; Estrogen nuclear receptor coactivator 1;)
genome : 126,102,307 - 126,253,176 (150,870)
query : 1 - 6,440 (6,440/6,440)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000656588 (
NM_001199620
)
(Nuclear receptor coactivator 7; 140 kDa estrogen receptor-associated protein; Estrogen nuclear receptor coactivator 1;)
genome : 126,102,307 - 126,253,176 (150,870)
query : 1 - 6,558 (6,558/6,558)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000080790
(
AF493978
)
(Nuclear receptor coactivator 7; 140 kDa estrogen receptor-associated protein; Estrogen nuclear receptor coactivator 1;)
genome : 126,102,307 - 126,252,257 (149,951)
query : 1 - 5,520 (5,520/5,550)
17 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;0.989;0.999;1.000;1.000;1.000;1.000;
1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR006571 : TLDc domain
IPR018392 : LysM domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000349637 (
ENST00000368357
)
(Nuclear receptor coactivator 7; 140 kDa estrogen receptor-associated protein; Estrogen nuclear receptor coactivator 1;)
genome : 126,102,307 - 126,252,257 (149,951)
query : 1 - 5,521 (5,521/5,521)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000426261
(
AK307395
)
(Nuclear receptor coactivator 7 isoform 1.)
genome : 126,102,328 - 126,211,130 (108,803)
query : 1 - 2,261 (2,261/2,271)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995)3'
coverage = 0.996
InterPro :
IPR018392 : LysM domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 19, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000501062
(
BC137094
)
Representative transcript
(Nuclear receptor coactivator 7; 140 kDa estrogen receptor-associated protein; Estrogen nuclear receptor coactivator 1;)
genome : 126,102,391 - 126,249,982 (147,592)
query : 1 - 3,280 (3,280/3,280)
18 exons
identity = 1.000
5'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006571 : TLDc domain
IPR018392 : LysM domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168140
Gallus
sp. (Chicken) : AJ719310
Mus
sp. (Mouse) : AK128935
Bos
sp. (Cow) : BC149071
Pongo
sp. (Orangutan) : CR859716
Monodelphis
sp. (Opossum) : ENSMODT00000022442
Oryzias
sp. (Medaka) : ENSORLT00000021743
Tetraodon
sp. (Tetraodon) : GSTENT00030349001
Takifugu
sp. (Fugu) : SINFRUT00000149934
Pan
sp. (Chimpanzee) : XM_001165745
Equus
sp. (Horse) : XM_001917049
Canis
sp. (Dog) : XM_533488
Rattus
sp. (Rat) : XM_574285
Danio
sp. (Zebrafish) : XM_692637
HIX0006198
HIT000501063
(
BC137095
)
(Nuclear receptor coactivator 7; 140 kDa estrogen receptor-associated protein; Estrogen nuclear receptor coactivator 1;)
genome : 126,102,391 - 126,249,982 (147,592)
query : 1 - 3,162 (3,162/3,162)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006571 : TLDc domain
IPR018392 : LysM domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000318488 (
NM_181782
)
(Nuclear receptor coactivator 7; 140 kDa estrogen receptor-associated protein; Estrogen nuclear receptor coactivator 1;)
genome : 126,111,909 - 126,253,176 (141,268)
query : 1 - 6,457 (6,457/6,457)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000486069 (
NM_001122842
)
(Nuclear receptor coactivator 7; 140 kDa estrogen receptor-associated protein; Estrogen nuclear receptor coactivator 1;)
genome : 126,111,909 - 126,253,176 (141,268)
query : 1 - 6,424 (6,424/6,424)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000656589 (
NM_001199621
)
(Nuclear receptor coactivator 7 isoform 3.)
genome : 126,111,909 - 126,253,176 (141,268)
query : 1 - 6,203 (6,203/6,203)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000475960 (
ENST00000392477
)
(Nuclear receptor coactivator 7; 140 kDa estrogen receptor-associated protein; Estrogen nuclear receptor coactivator 1;)
genome : 126,112,001 - 126,252,266 (140,266)
query : 1 - 5,455 (5,455/5,455)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000047385
(
AK127512
)
(Nuclear receptor coactivator 7; 140 kDa estrogen receptor-associated protein; Estrogen nuclear receptor coactivator 1;)
genome : 126,112,099 - 126,250,105 (138,007)
query : 1 - 3,163 (3,163/3,163)
16 exons
identity = 1.000
5'(1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006571 : TLDc domain
IPR018392 : LysM domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 19, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000104215 (
ENST00000229634
)
(Nuclear receptor coactivator 7 isoform 3.)
genome : 126,112,111 - 126,250,173 (138,063)
query : 1 - 2,998 (2,998/2,998)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000489182
(
AK294558
)
(Nuclear receptor coactivator 7 isoform 3.)
genome : 126,112,111 - 126,250,173 (138,063)
query : 1 - 2,998 (2,998/2,998)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999;0.994;0.993;1.000;1.000;1.000;0.986;
1.000)3'
coverage = 1.000
InterPro :
IPR006571 : TLDc domain
IPR018392 : LysM domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000054200
(
BX537385
)
(Nuclear receptor coactivator 7; 140 kDa estrogen receptor-associated protein; Estrogen nuclear receptor coactivator 1;)
genome : 126,112,114 - 126,252,253 (140,140)
query : 1 - 5,329 (5,329/5,381)
16 exons
identity = 0.999
5'(0.990;1.000;1.000;1.000;1.000;0.991;1.000;
0.995;0.999;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
InterPro :
IPR006571 : TLDc domain
IPR018392 : LysM domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000027533
(
AL832621
)
(Nuclear receptor coactivator 7 isoform 2.)
genome : 126,112,116 - 126,252,253 (140,138)
query : 1 - 5,294 (5,294/5,301)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 0.999
InterPro :
IPR006571 : TLDc domain
IPR018392 : LysM domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000027540
(
AL832628
)
(Nuclear receptor coactivator 7 isoform 2.)
genome : 126,112,153 - 126,252,253 (140,101)
query : 2 - 5,256 (5,255/5,283)
16 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.991;1.000;0.992;
1.000;0.998;1.000;1.000;0.968;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
InterPro :
IPR018392 : LysM domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000328492
(
AB074156
)
(Nuclear receptor coactivator 7 isoform 3.)
genome : 126,112,160 - 126,211,130 (98,971)
query : 1 - 1,794 (1,794/1,808)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;0.991;1.000;0.992;1.000;
0.998)3'
coverage = 0.992
InterPro :
IPR018392 : LysM domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14, cyto 7.5, cysk 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000029172
(
AL834442
)
(Nuclear receptor coactivator 7 isoform 3.)
genome : 126,176,326 - 126,253,176 (76,851)
query : 1 - 5,844 (5,844/5,862)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006571 : TLDc domain
IPR018392 : LysM domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000511019 (
ENST00000413085
)
(Nuclear receptor coactivator 7 isoform 3.)
genome : 126,203,572 - 126,211,127 (7,556)
query : 1 - 1,321 (1,321/1,321)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 14.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0006198
HIT000093158
(
BC033612
)
(Nuclear receptor coactivator 7 isoform 3.)
genome : 126,206,376 - 126,252,253 (45,878)
query : 11 - 4,361 (4,351/4,375)
9 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994)3'
coverage = 0.998
InterPro :
IPR006571 : TLDc domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 13.5, cyto 5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006198)
HIX0207427
eHIT000019854 ( ESTsASS_6_504 )
Representative transcript
(Non-protein coding transcript.)
genome : 127,170,330 - 127,202,061 (31,732)
query : 1 - 794 (794/794)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207427)
ESTs used for assembly :
BG221200
AL389919.11
126000001-126006131 F +
NCBI
AL078594.36
126006132-126168955 F +
NCBI
AL136163.15
126168956-126248294 F +
NCBI
AL035689.26
126248295-126392558 F -
NCBI
AL391115.10
126392559-126417373 F +
NCBI
AL162580.20
126417374-126494906 F +
NCBI
AC020559.4
126494907-126688985 F +
NCBI
AL356534.12
126688986-126857799 F +
NCBI
AL450347.5
126857800-126933094 F +
NCBI
AL359535.10
126933095-126973733 F +
NCBI
AL137183.7
126973734-127001900 F +
NCBI
AL035603.11
127001901-127140242 F +
NCBI
AL390055.14
127140243-127187465 F +
NCBI
AL354858.16
127187466-127342723 F +
NCBI
AL590791.1
127342724-127345288 F +
NCBI
AL031776.7
127345289-127453396 F -
NCBI
AL590733.8
127453397-127586903 F +
NCBI
AL109939.13
127586904-127600000 F +
NCBI