bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0006213
HIT000724179 (
NM_001258275
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,465,447 - 130,686,570 (221,124)
query : 1 - 2,390 (2,390/2,390)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_mito 12.5, cyto_nucl 10.8333,
mito_pero 4.83333, mito 4.5, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000365469 (
NM_001017373
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,465,447 - 130,544,099 (78,653)
query : 1 - 2,109 (2,109/2,109)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_mito 12.5, cyto_nucl 10.8333,
mito_pero 4.83333, mito 4.5, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000725388 (
NM_001277185
)
(Sterile alpha motif domain-containing protein 3 isoform 3.)
genome : 130,465,447 - 130,537,030 (71,584)
query : 1 - 1,891 (1,891/1,891)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_mito 10.8333, cyto_nucl 9.83333,
mito_pero 6.83333, pero 5.5, mito 5, nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000349414 (
ENST00000368134
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,465,460 - 130,686,570 (221,111)
query : 1 - 2,377 (2,377/2,377)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_mito 12.5, cyto_nucl 10.8333,
mito_pero 4.83333, mito 4.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000016218
(
AK091351
)
Representative transcript
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,465,463 - 130,686,570 (221,108)
query : 3 - 2,376 (2,374/2,376)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)5'
coverage = 0.999
InterPro :
IPR001660 : Sterile alpha motif domain
IPR013761 : Sterile alpha motif/pointed domain
IPR021129 : Sterile alpha motif, type 1
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_mito 12.5, cyto_nucl 10.8333,
mito_pero 4.83333, mito 4.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK082201
Bos
sp. (Cow) : BC111302
Canis
sp. (Dog) : ENSCAFT00000001709
Equus
sp. (Horse) : ENSECAT00000011884
Gallus
sp. (Chicken) : ENSGALT00000022690
Pongo
sp. (Orangutan) : ENSPPYT00000019791
Rattus
sp. (Rat) : ENSRNOT00000061393
Macaca
sp. (Macaque) : XM_001104456
Pan
sp. (Chimpanzee) : XM_001168433
Monodelphis
sp. (Opossum) : XM_001380274
HIX0006213
HIT000016749
(
AK091882
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,465,463 - 130,544,099 (78,637)
query : 1 - 2,093 (2,093/2,093)
12 exons
identity = 0.999
3'(1.000;0.995;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001660 : Sterile alpha motif domain
IPR013761 : Sterile alpha motif/pointed domain
IPR021129 : Sterile alpha motif, type 1
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_mito 12.5, cyto_nucl 10.8333,
mito_pero 4.83333, mito 4.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000537024 (
ENST00000439090
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,465,463 - 130,544,099 (78,637)
query : 1 - 2,093 (2,093/2,093)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_mito 12.5, cyto_nucl 10.8333,
mito_pero 4.83333, mito 4.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000496852
(
AK302228
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,465,463 - 130,537,030 (71,568)
query : 3 - 1,877 (1,875/1,877)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001660 : Sterile alpha motif domain
IPR013761 : Sterile alpha motif/pointed domain
IPR021129 : Sterile alpha motif, type 1
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_mito 10.8333, cyto_nucl 9.83333,
mito_pero 6.83333, pero 5.5, mito 5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000555497 (
ENST00000457563
)
(Sterile alpha motif domain-containing protein 3 isoform 3.)
genome : 130,465,463 - 130,537,032 (71,570)
query : 1 - 1,877 (1,877/1,877)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_mito 10.8333, cyto_nucl 9.83333,
mito_pero 6.83333, pero 5.5, mito 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000535411 (
ENST00000437477
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,465,526 - 130,543,958 (78,433)
query : 1 - 2,028 (2,028/2,028)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_mito 12.5, cyto_nucl 10.8333,
mito_pero 4.83333, mito 4.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000631857 (
ENST00000532763
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,480,677 - 130,536,787 (56,111)
query : 1 - 3,690 (3,690/3,690)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000627601 (
ENST00000528422
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,496,903 - 130,530,678 (33,776)
query : 1 - 558 (558/558)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8.5, cyto_nucl 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000626094 (
ENST00000526886
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,496,980 - 130,505,777 (8,798)
query : 1 - 454 (454/454)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 9, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000632380 (
ENST00000533296
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,497,049 - 130,537,003 (39,955)
query : 1 - 1,436 (1,436/1,436)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000428941
(
AK310075
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,497,049 - 130,536,783 (39,735)
query : 1 - 1,215 (1,215/1,215)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR001660 : Sterile alpha motif domain
IPR013761 : Sterile alpha motif/pointed domain
IPR021129 : Sterile alpha motif, type 1
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000040897
(
BC029851
)
(Sterile alpha motif domain-containing protein 3 isoform 3.)
genome : 130,504,133 - 130,536,435 (32,303)
query : 1 - 993 (993/1,047)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;0.991;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001660 : Sterile alpha motif domain
IPR013761 : Sterile alpha motif/pointed domain
IPR021129 : Sterile alpha motif, type 1
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000123759 (
ENST00000324172
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,504,133 - 130,536,435 (32,303)
query : 1 - 993 (993/993)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000388076
(
BC119757
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,504,368 - 130,536,435 (32,068)
query : 1 - 758 (758/758)
6 exons
identity = 0.999
3'(1.000;1.000;0.995;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001660 : Sterile alpha motif domain
IPR013761 : Sterile alpha motif/pointed domain
IPR021129 : Sterile alpha motif, type 1
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000388077
(
BC119758
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,504,368 - 130,536,435 (32,068)
query : 1 - 758 (758/758)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001660 : Sterile alpha motif domain
IPR013761 : Sterile alpha motif/pointed domain
IPR021129 : Sterile alpha motif, type 1
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000389281
(
BC127653
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,504,371 - 130,536,435 (32,065)
query : 1 - 926 (926/926)
6 exons
identity = 0.997
3'(0.988;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000389282
(
BC127654
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,504,371 - 130,536,435 (32,065)
query : 1 - 926 (926/926)
6 exons
identity = 0.997
3'(0.988;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000624178 (
ENST00000524930
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,504,371 - 130,536,435 (32,065)
query : 1 - 929 (929/929)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, extr 5, mito_pero 5, mito 4.5, pero 4.5,
E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000631415 (
ENST00000532309
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,505,268 - 130,537,055 (31,788)
query : 1 - 679 (679/679)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 15, cyto_nucl 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000630668 (
ENST00000531544
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,505,632 - 130,537,079 (31,448)
query : 1 - 592 (592/592)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000628877 (
ENST00000529723
)
(Sterile alpha motif domain-containing protein 3 isoform 1.)
genome : 130,505,646 - 130,537,055 (31,410)
query : 1 - 545 (545/545)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 12, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0006213
HIT000628285 (
ENST00000529119
)
(Conserved hypothetical protein.)
genome : 130,542,671 - 130,607,390 (64,720)
query : 1 - 439 (439/439)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006213)
HIX0207463
HIT000441955_09
(
DQ575424
)
Representative transcript
(Non-protein coding transcript.)
genome : 130,585,570 - 130,585,598 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207463)
HIX0006215
HIT000001628
(
AB067500
)
Representative transcript
(Transmembrane protein 200A;)
genome : 130,686,879 - 130,764,208 (77,330)
query : 1 - 3,512 (3,512/3,512)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 5, E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006215)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK163932
Canis
sp. (Dog) : ENSCAFT00000001710
Monodelphis
sp. (Opossum) : ENSMODT00000031050
Oryzias
sp. (Medaka) : ENSORLT00000021481
Pongo
sp. (Orangutan) : ENSPPYT00000019792
Tetraodon
sp. (Tetraodon) : GSTENT00020688001
Danio
sp. (Zebrafish) : NM_001044800
Takifugu
sp. (Fugu) : SINFRUT00000140348
Rattus
sp. (Rat) : XM_001074340
Macaca
sp. (Macaque) : XM_001104291
Equus
sp. (Horse) : XM_001504270
Pan
sp. (Chimpanzee) : XM_518870
Bos
sp. (Cow) : XM_589121
HIX0006215
HIT000114673 (
ENST00000296978
)
(Transmembrane protein 200A;)
genome : 130,686,879 - 130,764,208 (77,330)
query : 1 - 3,512 (3,512/3,512)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 5, E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006215)
HIX0006215
HIT000724180 (
NM_001258276
)
(Transmembrane protein 200A;)
genome : 130,687,426 - 130,764,209 (76,784)
query : 1 - 2,902 (2,902/2,924)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 5, E.R._mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006215)
HIX0006215
HIT000724181 (
NM_001258277
)
(Transmembrane protein 200A;)
genome : 130,687,426 - 130,764,209 (76,784)
query : 1 - 2,966 (2,966/2,988)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 5, E.R._mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006215)
HIX0006215
HIT000434690
(
AK315824
)
(Transmembrane protein 200A;)
genome : 130,687,530 - 130,763,126 (75,597)
query : 1 - 1,715 (1,715/1,715)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
InterPro :
IPR018787 : Protein of unknown function DUF2371, TMEM200
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 5, E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006215)
HIX0006215
HIT000052860
(
BC044246
)
(Transmembrane protein 200A;)
genome : 130,687,607 - 130,764,508 (76,902)
query : 1 - 3,085 (3,085/3,120)
3 exons
identity = 0.998
5'(1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR018787 : Protein of unknown function DUF2371, TMEM200
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 5, E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006215)
HIX0006215
HIT000724182 (
NM_001258278
)
(Transmembrane protein 200A;)
genome : 130,742,241 - 130,764,209 (21,969)
query : 1 - 2,921 (2,921/2,943)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 5, E.R._mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006215)
HIX0006215
HIT000422963
(
AK290166
)
(Transmembrane protein 200A;)
genome : 130,742,247 - 130,763,111 (20,865)
query : 1 - 1,817 (1,817/1,817)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
InterPro :
IPR018787 : Protein of unknown function DUF2371, TMEM200
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 5, E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006215)
HIX0006215
HIT000644667 (
ENST00000545622
)
(Transmembrane protein 200A;)
genome : 130,742,247 - 130,763,111 (20,865)
query : 1 - 1,817 (1,817/1,817)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 5, E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006215)
HIX0006215
HIT000211519 (
NM_052913
)
(Transmembrane protein 200A;)
genome : 130,758,262 - 130,764,209 (5,948)
query : 1 - 5,020 (5,020/5,042)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 5, E.R._mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006215)
HIX0006215
HIT000241985
(
AB052099
)
(Transmembrane protein 200A;)
genome : 130,758,262 - 130,764,209 (5,948)
query : 1 - 5,020 (5,020/5,042)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR018787 : Protein of unknown function DUF2371, TMEM200
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 5, E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006215)
HIX0006215
HIT000475912 (
ENST00000392429
)
(Transmembrane protein 200A;)
genome : 130,758,262 - 130,764,206 (5,945)
query : 1 - 5,017 (5,017/5,017)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, pero 5, E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006215)
HIX0006215
HIT000488983
(
AK294359
)
(Transmembrane protein 200A.)
genome : 130,761,865 - 130,763,388 (1,524)
query : 1 - 1,524 (1,524/1,524)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR018787 : Protein of unknown function DUF2371, TMEM200
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 12.5, cyto 9, extr_plas 7, mito 4.5,
E.R._mito 4.5, cyto_pero 4.5, cyto_golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006215)
HIX0165845
HIT000552196 (
ENST00000454262
)
(Hypothetical short protein.)
genome : 131,018,457 - 131,018,923 (467)
query : 1 - 335 (335/335)
2 exons
identity = 0.997
5'(1.000;0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, cyto 11, plas 3, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165845)
HIX0006216
HIT000656088 (
NM_001195597
)
(Small leucine-rich protein 1.)
genome : 131,148,545 - 131,158,274 (9,730)
query : 1 - 2,512 (2,512/2,522)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 11, golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006216)
HIX0006216
HIT000386730
(
BC113027
)
(Small leucine-rich protein 1.)
genome : 131,148,545 - 131,156,145 (7,601)
query : 1 - 383 (383/384)
2 exons
identity = 0.995
5'(0.996;0.993)3'
coverage = 0.997
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, mito 10, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006216)
HIX0006216
HIT000640466 (
ENST00000541421
)
(Small leucine-rich protein 1.)
genome : 131,148,546 - 131,158,275 (9,730)
query : 1 - 2,512 (2,512/2,512)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 11, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006216)
HIX0006216
HIT000016767
(
AK091900
)
Representative transcript
(Small leucine-rich protein 1.)
genome : 131,148,546 - 131,158,273 (9,728)
query : 1 - 2,510 (2,510/2,510)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 11, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006216)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK008073
Rattus
sp. (Rat) : XM_001053427
Macaca
sp. (Macaque) : XM_001104212
Pan
sp. (Chimpanzee) : XM_001168525
Gallus
sp. (Chicken) : XM_001231443
HIX0006216
HIT000386729
(
BC113026
)
(Small leucine-rich protein 1.)
genome : 131,148,546 - 131,156,145 (7,600)
query : 1 - 382 (382/383)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.997
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 11, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006216)
HIX0006216
HIT000336792
(
BC101422
)
(Small leucine-rich protein 1.)
genome : 131,148,546 - 131,156,145 (7,600)
query : 1 - 382 (382/382)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 11, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006216)
HIX0006216
HIT000336793
(
BC101423
)
(Small leucine-rich protein 1.)
genome : 131,148,546 - 131,156,145 (7,600)
query : 1 - 382 (382/382)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 11, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006216)
HIX0006216
HIT000336794
(
BC101424
)
(Small leucine-rich protein 1.)
genome : 131,148,546 - 131,156,145 (7,600)
query : 1 - 382 (382/382)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 11, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006216)
HIX0006216
HIT000336795
(
BC101425
)
(Small leucine-rich protein 1.)
genome : 131,148,546 - 131,156,145 (7,600)
query : 1 - 382 (382/382)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 11, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006216)
HIX0216792
HIT000064610
(
AF054999
)
(Band 4.1, C-terminal domain containing protein.)
genome : 131,160,489 - 131,190,990 (30,502)
query : 1 - 1,705 (1,705/1,727)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008379 : Band 4.1, C-terminal
GO :
0003779 : Molecular Function : actin binding
0005198 : Molecular Function : structural molecule activity
0005856 : Cellular Component : cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cysk 6, extr 5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000024165
(
AL050384
)
(Band 4.1-like protein 2 isoform d.)
genome : 131,160,491 - 131,190,047 (29,557)
query : 1 - 2,998 (2,998/3,008)
5 exons
identity = 0.996
3'(0.998;1.000;1.000;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR008379 : Band 4.1, C-terminal
GO :
0003779 : Molecular Function : actin binding
0005198 : Molecular Function : structural molecule activity
0005856 : Cellular Component : cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 22, mito 4, nucl 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000550084 (
ENST00000452150
)
(Band 4.1, C-terminal domain containing protein.)
genome : 131,160,487 - 131,190,047 (29,561)
query : 1 - 2,994 (2,994/2,994)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 22, mito 4, nucl 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000625990 (
ENST00000526782
)
(Conserved hypothetical protein.)
genome : 131,161,513 - 131,179,468 (17,956)
query : 1 - 424 (424/424)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000349406 (
ENST00000368126
)
(Band 4.1, C-terminal domain containing protein.)
genome : 131,161,516 - 131,186,973 (25,458)
query : 1 - 715 (715/715)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.6667, cyto 16.5, cyto_plas 10.6667,
nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000626623 (
ENST00000527423
)
(SAB domain containing protein.)
genome : 131,190,703 - 131,201,892 (11,190)
query : 1 - 962 (962/962)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 17, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000554031 (
ENST00000456097
)
(SAB domain containing protein.)
genome : 131,190,799 - 131,211,564 (20,766)
query : 1 - 1,138 (1,138/1,138)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 11, cyto_nucl 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000245995
(
AJ251209
)
(Band 4.1-like protein 2 isoform a.)
genome : 131,190,799 - 131,197,922 (7,124)
query : 15 - 645 (631/645)
3 exons
identity = 0.997
3'(1.000;1.000;0.982)5'
coverage = 0.978
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 8, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000624442 (
ENST00000525198
)
(SAB domain containing protein.)
genome : 131,190,992 - 131,202,041 (11,050)
query : 1 - 981 (981/981)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, nucl 7.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000632985 (
ENST00000533912
)
(SAB domain containing protein.)
genome : 131,190,992 - 131,199,354 (8,363)
query : 1 - 514 (514/514)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 14.5, nucl 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000426630
(
AK307764
)
Representative transcript
(Band 4.1-like protein 2 isoform c.)
genome : 131,191,019 - 131,291,623 (100,605)
query : 1 - 2,296 (2,296/2,296)
13 exons
identity = 0.999
3'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR014847 : FERM adjacent (FA)
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000633228 (
ENST00000534166
)
(SAB domain containing protein.)
genome : 131,191,217 - 131,199,765 (8,549)
query : 1 - 572 (572/572)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12, extr 6, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000629300 (
ENST00000530148
)
(FERM, N-terminal domain containing protein.)
genome : 131,220,634 - 131,291,558 (70,925)
query : 1 - 664 (664/664)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000627364 (
ENST00000528179
)
(Ezrin/radixin/moesin like family protein.)
genome : 131,220,693 - 131,384,385 (163,693)
query : 1 - 560 (560/560)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10, extr 9, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000625546 (
ENST00000526333
)
(Ezrin/radixin/moesin like family protein.)
genome : 131,222,101 - 131,384,383 (162,283)
query : 1 - 546 (546/549)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 12, mito 8, extr 6, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000628863 (
ENST00000529709
)
(Conserved hypothetical protein.)
genome : 131,276,413 - 131,334,735 (58,323)
query : 1 - 585 (585/585)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 5, extr 3, cyto_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000631601 (
ENST00000532499
)
(Conserved hypothetical protein.)
genome : 131,277,138 - 131,335,331 (58,194)
query : 1 - 591 (591/591)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 5, extr 3, cyto_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000626191 (
ENST00000526983
)
(Conserved hypothetical protein.)
genome : 131,277,165 - 131,336,982 (59,818)
query : 1 - 552 (552/552)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 7, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000630486 (
ENST00000531356
)
(Conserved hypothetical protein.)
genome : 131,277,244 - 131,299,936 (22,693)
query : 1 - 588 (588/588)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0216792
HIT000629851 (
ENST00000530707
)
(Conserved hypothetical protein.)
genome : 131,277,272 - 131,383,716 (106,445)
query : 1 - 565 (565/565)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216792)
HIX0006218
HIT000005133
(
AK021859
)
Representative transcript
(Conserved hypothetical protein.)
genome : 131,367,105 - 131,368,496 (1,392)
query : 1 - 1,391 (1,391/1,391)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 12.3333, extr 11, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006218)
HIX0216869
HIT000347638 (
ENST00000366358
)
(Conserved hypothetical protein.)
genome : 131,458,518 - 131,505,698 (47,181)
query : 1 - 901 (901/901)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.5, nucl 9.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216869)
HIX0216869
HIT000583655 (
ENST00000479599
)
(Conserved hypothetical protein.)
genome : 131,481,199 - 131,490,375 (9,177)
query : 1 - 535 (535/535)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216869)
HIX0216869
HIT000642860 (
ENST00000543815
)
(Protein kinase A anchor protein, nuclear localisation signal domain containing protein.)
genome : 131,481,315 - 131,540,890 (59,576)
query : 1 - 412 (412/412)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 26, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216869)
HIX0184351
HIT000506088 (
ENST00000407765
)
(Conserved hypothetical protein.)
genome : 131,505,465 - 131,506,626 (1,162)
query : 1 - 1,162 (1,162/1,162)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0184351)
HIX0032781
HIT000201572 (
NM_004842
)
(Protein kinase A anchor protein, RI-RII subunit-binding domain containing protein.)
genome : 131,571,299 - 131,604,675 (33,377)
query : 1 - 2,464 (2,464/2,473)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000212475 (
NM_138633
)
(Protein kinase A anchor protein, RI-RII subunit-binding domain containing protein.)
genome : 131,571,299 - 131,604,675 (33,377)
query : 1 - 2,533 (2,533/2,542)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, extr 10, mito 8, cyto_nucl 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000134896 (
ENST00000342266
)
(Protein kinase A anchor protein, RI-RII subunit-binding domain containing protein.)
genome : 131,571,299 - 131,604,672 (33,374)
query : 1 - 2,461 (2,461/2,461)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000387875
(
BC118601
)
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,571,521 - 131,603,062 (31,542)
query : 1 - 629 (629/629)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000387880
(
BC118606
)
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,571,521 - 131,603,062 (31,542)
query : 1 - 629 (629/629)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000389809
(
BC128398
)
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,571,521 - 131,603,062 (31,542)
query : 1 - 629 (629/629)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000389810
(
BC128399
)
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,571,521 - 131,603,062 (31,542)
query : 1 - 629 (629/629)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000435254
(
BC141926
)
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,571,521 - 131,603,062 (31,542)
query : 1 - 629 (629/629)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000435255
(
BC141927
)
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,571,521 - 131,603,062 (31,542)
query : 1 - 629 (629/629)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000335033
(
BC094732
)
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,571,561 - 131,604,670 (33,110)
query : 1 - 2,197 (2,197/2,214)
2 exons
identity = 0.998
5'(0.990;0.999)3'
coverage = 0.999
InterPro :
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000265072
(
BC073847
)
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,571,563 - 131,604,088 (32,526)
query : 1 - 1,613 (1,613/1,640)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.996
InterPro :
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000260958
(
BC063499
)
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,571,565 - 131,604,672 (33,108)
query : 1 - 2,195 (2,195/2,227)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000579125 (
ENST00000474850
)
(Protein kinase A anchor protein, RI-RII subunit-binding domain containing protein.)
genome : 131,571,570 - 131,603,083 (31,514)
query : 1 - 670 (670/670)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, extr 10, mito 8, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000423068
(
AK290271
)
Representative transcript
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,571,570 - 131,603,025 (31,456)
query : 1 - 612 (612/612)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, extr 10, mito 8, cyto_nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000430686
(
AK311820
)
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,571,573 - 131,602,866 (31,294)
query : 1 - 381 (381/381)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000339787
(
BC110897
)
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,571,607 - 131,604,672 (33,066)
query : 1 - 2,153 (2,153/2,178)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000037752
(
BC016927
)
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,571,621 - 131,604,672 (33,052)
query : 1 - 2,139 (2,139/2,163)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000072063
(
AF161075
)
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,571,623 - 131,602,929 (31,307)
query : 1 - 463 (463/463)
3 exons
identity = 0.998
5'(1.000;0.986;1.000)3'
coverage = 1.000
InterPro :
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, extr 10, mito 8, cyto_nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000487486
(
AB451273
)
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,571,708 - 131,602,864 (31,157)
query : 1 - 244 (244/246)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.992
InterPro :
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0032781
HIT000487613
(
AB451400
)
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,571,708 - 131,602,863 (31,156)
query : 1 - 243 (243/243)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032781)
HIX0165187
HIT000504294 (
ENST00000402896
)
(Ribosomal protein L21e family protein.)
genome : 131,790,199 - 131,790,676 (478)
query : 1 - 478 (478/478)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, cyto 9, extr 7, E.R._mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165187)
HIX0006220
HIT000349367 (
ENST00000368087
)
(Arginase-1; EC=3.5.3.1; Liver-type arginase; Type I arginase;)
genome : 131,894,284 - 131,905,472 (11,189)
query : 1 - 1,532 (1,532/1,532)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
HIX0006220
HIT000573820 (
ENST00000469293
)
(Arginase-1; EC=3.5.3.1; Liver-type arginase; Type I arginase;)
genome : 131,894,334 - 131,900,582 (6,249)
query : 1 - 478 (478/478)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 10, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
HIX0006220
HIT000197097 (
NM_000045
)
(Arginase-1; EC=3.5.3.1; Liver-type arginase; Type I arginase;)
genome : 131,894,344 - 131,905,472 (11,129)
query : 1 - 1,472 (1,472/1,475)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.998
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
HIX0006220
HIT000723102 (
NM_001244438
)
(Arginase-1; EC=3.5.3.1; Liver-type arginase; Type I arginase;)
genome : 131,894,344 - 131,905,472 (11,129)
query : 1 - 1,496 (1,496/1,499)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.998
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
HIX0006220
HIT000084184
(
AY074488
)
(Arginase-1 isoform 1.)
genome : 131,894,365 - 131,905,465 (11,101)
query : 1 - 1,468 (1,468/1,498)
8 exons
identity = 0.998
5'(1.000;1.000;0.995;1.000;1.000;0.990;1.000;
0.998)3'
coverage = 0.997
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006035 : Ureohydrolase
IPR014033 : Arginase
IPR020855 : Ureohydrolase, manganese-binding site
IPR023696 : Ureohydrolase domain
GO :
0004053 : Molecular Function : arginase activity
0006525 : Biological Process : arginine metabolic process
0016813 : Molecular Function : hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
HIX0006220
HIT000310881 (
ENST00000356962
)
(Arginase-1; EC=3.5.3.1; Liver-type arginase; Type I arginase;)
genome : 131,894,365 - 131,905,465 (11,101)
query : 1 - 1,468 (1,468/1,468)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
HIX0006220
HIT000032375
(
BC005321
)
(Arginase-1; EC=3.5.3.1; Liver-type arginase; Type I arginase;)
genome : 131,894,366 - 131,905,465 (11,100)
query : 1 - 1,185 (1,185/1,216)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.998
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006035 : Ureohydrolase
IPR014033 : Arginase
IPR023696 : Ureohydrolase domain
GO :
0004053 : Molecular Function : arginase activity
0006525 : Biological Process : arginine metabolic process
0016813 : Molecular Function : hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
HIX0006220
HIT000581020 (
ENST00000476845
)
(Arginase-1; EC=3.5.3.1; Liver-type arginase; Type I arginase;)
genome : 131,894,366 - 131,905,465 (11,100)
query : 1 - 1,185 (1,185/1,185)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
HIX0006220
HIT000111269 (
ENST00000275196
)
(Arginase-1; EC=3.5.3.1; Liver-type arginase; Type I arginase;)
genome : 131,894,366 - 131,904,538 (10,173)
query : 1 - 693 (693/693)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 16, nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
HIX0006220
HIT000194336
(
M14502
)
(Arginase-1; EC=3.5.3.1; Liver-type arginase; Type I arginase;)
genome : 131,894,367 - 131,905,468 (11,102)
query : 1 - 1,445 (1,445/1,445)
8 exons
identity = 0.999
5'(1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006035 : Ureohydrolase
IPR014033 : Arginase
IPR020855 : Ureohydrolase, manganese-binding site
IPR023696 : Ureohydrolase domain
GO :
0004053 : Molecular Function : arginase activity
0006525 : Biological Process : arginine metabolic process
0016813 : Molecular Function : hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
HIX0006220
HIT000601488 (
ENST00000498260
)
(Arginase-1; EC=3.5.3.1; Liver-type arginase; Type I arginase;)
genome : 131,894,382 - 131,900,805 (6,424)
query : 1 - 726 (726/726)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 6, mito 6, cyto_mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
HIX0006220
HIT000595990 (
ENST00000492505
)
(Arginase-1 isoform 1.)
genome : 131,894,385 - 131,902,440 (8,056)
query : 1 - 371 (371/371)
5 exons
identity = 0.987
5'(1.000;1.000;1.000;0.868;1.000)3'
coverage = 1.000
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
HIX0006220
HIT000578111 (
ENST00000473794
)
(Arginase-1; EC=3.5.3.1; Liver-type arginase; Type I arginase;)
genome : 131,894,392 - 131,904,566 (10,175)
query : 1 - 710 (710/710)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
HIX0006220
HIT000038874
(
BC020653
)
Representative transcript
(Arginase-1; EC=3.5.3.1; Liver-type arginase; Type I arginase;)
genome : 131,894,418 - 131,905,472 (11,055)
query : 1 - 1,398 (1,398/1,428)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006035 : Ureohydrolase
IPR014033 : Arginase
IPR020855 : Ureohydrolase, manganese-binding site
IPR023696 : Ureohydrolase domain
GO :
0004053 : Molecular Function : arginase activity
0006525 : Biological Process : arginine metabolic process
0016813 : Molecular Function : hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK149471
Danio
sp. (Zebrafish) : AY398311
Rattus
sp. (Rat) : BC091158
Bos
sp. (Cow) : BC105497
Tetraodon
sp. (Tetraodon) : CR669715
Equus
sp. (Horse) : ENSECAT00000025342
Monodelphis
sp. (Opossum) : ENSMODT00000022316
Oryzias
sp. (Medaka) : ENSORLT00000016835
Pongo
sp. (Orangutan) : ENSPPYT00000019796
Pan
sp. (Chimpanzee) : ENSPTRT00000048540
Takifugu
sp. (Fugu) : SINFRUT00000148803
Danio
sp. (Zebrafish) : XM_001922563
Canis
sp. (Dog) : XM_532053
HIX0006220
HIT000099661
(
BT006741
)
(Arginase-1; EC=3.5.3.1; Liver-type arginase; Type I arginase;)
genome : 131,894,423 - 131,905,047 (10,625)
query : 1 - 710 (710/711)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.990)3'
coverage = 0.999
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006035 : Ureohydrolase
IPR014033 : Arginase
IPR023696 : Ureohydrolase domain
GO :
0004053 : Molecular Function : arginase activity
0006525 : Biological Process : arginine metabolic process
0016813 : Molecular Function : hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
HIX0006220
HIT000588650 (
ENST00000484820
)
(Arginase-1; EC=3.5.3.1; Liver-type arginase; Type I arginase;)
genome : 131,897,774 - 131,900,558 (2,785)
query : 1 - 410 (410/410)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, mito 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
HIX0006220
HIT000048187
(
AK128314
)
(Arginase-1; EC=3.5.3.1; Liver-type arginase; Type I arginase;)
genome : 131,900,532 - 131,905,465 (4,934)
query : 1 - 4,494 (4,494/4,494)
3 exons
identity = 0.999
5'(0.999;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.5.3.1
KEGG pathway :
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR006035 : Ureohydrolase
IPR014033 : Arginase
IPR020855 : Ureohydrolase, manganese-binding site
IPR023696 : Ureohydrolase domain
GO :
0004053 : Molecular Function : arginase activity
0006525 : Biological Process : arginine metabolic process
0016813 : Molecular Function : hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, mito 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006220)
HIX0216856
HIT000247875
(
AJ420587
)
Representative transcript
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,907,878 - 131,917,661 (9,784)
query : 12 - 3,184 (3,173/3,203)
7 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.991
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216856)
HIX0216856
HIT000583288 (
ENST00000479213
)
(Mediator complex, subunit Med23 family protein.)
genome : 131,907,878 - 131,917,661 (9,784)
query : 1 - 3,173 (3,173/3,173)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216856)
HIX0216856
HIT000557735
(
EU392525
)
(Conserved hypothetical protein.)
genome : 131,907,888 - 131,924,228 (16,341)
query : 1 - 1,065 (1,065/1,065)
2 exons
identity = 0.993
3'(1.000;0.881)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto 8.5, extr 8, cyto_nucl 7, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216856)
HIX0216856
HIT000588714 (
ENST00000484885
)
(Mediator complex, subunit Med23 family protein.)
genome : 131,911,550 - 131,913,124 (1,575)
query : 1 - 705 (705/705)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 9, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216856)
HIX0216836
HIT000086739
(
BC007088
)
Representative transcript
(Mediator complex, subunit Med23 family protein.)
genome : 131,944,517 - 131,949,363 (4,847)
query : 1 - 544 (544/569)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216836)
HIX0216836
HIT000593476 (
ENST00000489888
)
(Mediator complex, subunit Med23 family protein.)
genome : 131,948,101 - 131,949,340 (1,240)
query : 1 - 745 (745/745)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, nucl 6, plas 4, extr 4, E.R. 4, pero 4,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216836)
HIX0020444
HIT000427946
(
AK309080
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,949,582 - 131,997,937 (48,356)
query : 1 - 1,536 (1,536/1,536)
12 exons
identity = 0.999
5'(1.000;0.996;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
InterPro :
IPR001212 : Somatomedin B domain
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003824 : Molecular Function : catalytic activity
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0008152 : Biological Process : metabolic process
0030247 : Molecular Function : polysaccharide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0020444
HIT000525641 (
ENST00000427707
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,949,582 - 131,997,937 (48,356)
query : 1 - 1,536 (1,536/1,536)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0020444
HIT000512239 (
ENST00000414305
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,949,601 - 132,068,553 (118,953)
query : 1 - 3,413 (3,413/3,413)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, pero 10, plas 5, mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0020444
HIT000385237
(
AK226107
)
Representative transcript
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,949,601 - 132,068,203 (118,603)
query : 1 - 3,063 (3,063/3,063)
26 exons
identity = 1.000
5'(1.000;0.996;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
InterPro :
IPR001212 : Somatomedin B domain
IPR001604 : DNA/RNA non-specific endonuclease
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR020821 : Extracellular Endonuclease, subunit A
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003676 : Molecular Function : nucleic acid binding
0003824 : Molecular Function : catalytic activity
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0008152 : Biological Process : metabolic process
0016787 : Molecular Function : hydrolase activity
0030247 : Molecular Function : polysaccharide binding
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, pero 10, plas 5, mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK132256
Bos
sp. (Cow) : BC122742
Danio
sp. (Zebrafish) : BC159233
Canis
sp. (Dog) : ENSCAFT00000000005
Equus
sp. (Horse) : ENSECAT00000007581
Oryzias
sp. (Medaka) : ENSORLT00000000921
Pongo
sp. (Orangutan) : ENSPPYT00000019798
Tetraodon
sp. (Tetraodon) : GSTENT00030408001
Takifugu
sp. (Fugu) : SINFRUT00000182235
Rattus
sp. (Rat) : U78788
Macaca
sp. (Macaque) : XM_001103528
Pan
sp. (Chimpanzee) : XM_001168720
Monodelphis
sp. (Opossum) : XM_001380361
Equus
sp. (Horse) : XM_001503291
Canis
sp. (Dog) : XM_532050
Gallus
sp. (Chicken) : XR_027215
HIX0020444
HIT000008173
(
AK024899
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,958,442 - 132,068,550 (110,109)
query : 1 - 3,165 (3,165/3,180)
25 exons
identity = 0.998
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;0.985;0.986;1.000;0.992;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
InterPro :
IPR001212 : Somatomedin B domain
IPR001604 : DNA/RNA non-specific endonuclease
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR020821 : Extracellular Endonuclease, subunit A
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003676 : Molecular Function : nucleic acid binding
0003824 : Molecular Function : catalytic activity
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0008152 : Biological Process : metabolic process
0016787 : Molecular Function : hydrolase activity
0030247 : Molecular Function : polysaccharide binding
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, pero 10, plas 5, mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0020444
HIT000201739 (
NM_005021
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,958,442 - 132,068,550 (110,109)
query : 1 - 3,165 (3,165/3,180)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, pero 10, plas 5, mito_pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0020444
HIT000311461 (
ENST00000357639
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,958,442 - 132,068,539 (110,098)
query : 1 - 3,154 (3,154/3,154)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, pero 10, plas 5, mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0020444
HIT000434759
(
AK315893
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,958,442 - 132,004,244 (45,803)
query : 1 - 1,400 (1,400/1,400)
13 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
InterPro :
IPR001212 : Somatomedin B domain
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003824 : Molecular Function : catalytic activity
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0008152 : Biological Process : metabolic process
0030247 : Molecular Function : polysaccharide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0020444
HIT000525082 (
ENST00000427148
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,958,442 - 132,004,244 (45,803)
query : 1 - 1,400 (1,400/1,400)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0020444
HIT000429557
(
AK310691
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 1; E-NPP 1; Membrane component chromosome 6 surface marker 1; Phosphodiesterase I/nucleotide pyrophosphatase 1; Plasma-cell membrane glycoprotein PC-1; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,958,442 - 132,004,243 (45,802)
query : 1 - 1,197 (1,197/1,197)
11 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
InterPro :
IPR001212 : Somatomedin B domain
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003824 : Molecular Function : catalytic activity
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0008152 : Biological Process : metabolic process
0030247 : Molecular Function : polysaccharide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 8, extr_plas 8, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0020444
HIT000490704
(
AK296080
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,958,442 - 131,996,660 (38,219)
query : 1 - 1,430 (1,430/1,430)
10 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
InterPro :
IPR001212 : Somatomedin B domain
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003824 : Molecular Function : catalytic activity
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0008152 : Biological Process : metabolic process
0030247 : Molecular Function : polysaccharide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0020444
HIT000642180 (
ENST00000543135
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,958,442 - 131,996,660 (38,219)
query : 1 - 1,430 (1,430/1,430)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0020444
HIT000425700
(
AK292903
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,958,444 - 132,068,547 (110,104)
query : 1 - 3,160 (3,160/3,160)
25 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
InterPro :
IPR001212 : Somatomedin B domain
IPR001604 : DNA/RNA non-specific endonuclease
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR020821 : Extracellular Endonuclease, subunit A
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003676 : Molecular Function : nucleic acid binding
0003824 : Molecular Function : catalytic activity
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0008152 : Biological Process : metabolic process
0016787 : Molecular Function : hydrolase activity
0030247 : Molecular Function : polysaccharide binding
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, pero 10, plas 5, mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0020444
HIT000521765 (
ENST00000423831
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,958,444 - 131,973,791 (15,348)
query : 1 - 598 (598/598)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 4, mito 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0020444
HIT000469100
(
EF560735
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,958,465 - 132,068,204 (109,740)
query : 1 - 2,796 (2,796/2,814)
25 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.996)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
InterPro :
IPR001212 : Somatomedin B domain
IPR001604 : DNA/RNA non-specific endonuclease
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR020821 : Extracellular Endonuclease, subunit A
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003676 : Molecular Function : nucleic acid binding
0003824 : Molecular Function : catalytic activity
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0008152 : Biological Process : metabolic process
0016787 : Molecular Function : hydrolase activity
0030247 : Molecular Function : polysaccharide binding
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, pero 10, plas 5, mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0020444
HIT000311965 (
ENST00000358229
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,958,525 - 132,068,096 (109,572)
query : 1 - 2,492 (2,492/2,492)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, pero 8, plas 5, cyto 3, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0020444
HIT000342523
(
DQ234347
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,958,525 - 132,068,096 (109,572)
query : 1 - 2,492 (2,492/2,492)
24 exons
identity = 0.998
5'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
InterPro :
IPR001212 : Somatomedin B domain
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003824 : Molecular Function : catalytic activity
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0008152 : Biological Process : metabolic process
0030247 : Molecular Function : polysaccharide binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, pero 8, plas 5, cyto 3, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0020444
HIT000575381 (
ENST00000470930
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,962,595 - 131,995,348 (32,754)
query : 1 - 550 (550/550)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0207536
HIT000616154 (
ENST00000516751
)
(Non-protein coding transcript.)
genome : 131,963,958 - 131,964,106 (149)
query : 1 - 149 (149/149)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207536)
HIX0020444
HIT000597434 (
ENST00000494023
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 3; E-NPP 3; Phosphodiesterase I beta; PD-Ibeta; Phosphodiesterase I/nucleotide pyrophosphatase 3; AltName: CD_antigen=CD203c; Includes: Alkaline phosphodiesterase I; EC=3.1.4.1; Includes: Nucleotide pyrophosphatase; NPPase; EC=3.6.1.9;)
genome : 131,973,997 - 131,996,518 (22,522)
query : 1 - 632 (632/632)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.1
,
EC 3.6.1.9
KEGG pathway :
00230 : Purine metabolism (100)
00500 : Starch and sucrose metabolism (71)
00740 : Riboflavin metabolism (21)
00760 : Nicotinate and nicotinamide metabolism (44)
00770 : Pantothenate and CoA biosynthesis (30)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020444)
HIX0200923
HIT000120519_01 (
ENST00000315453
)
(Olfactory receptor 2A4; Olfactory receptor 2A10; Olfactory receptor OR6-37;)
genome : 132,021,520 - 132,022,635 (1,116)
query : 1 - 1,116 (1,116/1,116)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200923)
HIX0200923
HIT000596767_01 (
ENST00000493325
)
(Olfactory receptor 2A7; Olfactory receptor OR7-18;)
genome : 132,021,520 - 132,022,635 (1,116)
query : 1 - 1,116 (1,116/1,116)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200923)
HIX0200923
HIT000388150
(
BC120953
)
(Olfactory receptor 2A4; Olfactory receptor 2A10; Olfactory receptor OR6-37;)
genome : 132,021,609 - 132,022,541 (933)
query : 1 - 933 (933/935)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.998
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200923)
HIX0200923
HIT000209996 (
NM_030908
)
(Olfactory receptor 2A4; Olfactory receptor 2A10; Olfactory receptor OR6-37;)
genome : 132,021,609 - 132,022,541 (933)
query : 1 - 933 (933/933)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200923)
HIX0200923
HIT000388151
(
BC120954
)
Representative transcript
(Olfactory receptor 2A4; Olfactory receptor 2A10; Olfactory receptor OR6-37;)
genome : 132,021,609 - 132,022,541 (933)
query : 1 - 933 (933/933)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200923)
HIX0200922
HIT000120003_01 (
ENST00000314099
)
(Cutaneous T-cell lymphoma-associated antigen 4; Protein cTAGE-4;)
genome : 132,029,581 - 132,032,206 (2,626)
query : 1 - 2,626 (2,626/2,626)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, E.R. 7.5, cyto_nucl 7, pero 7, nucl 4.5,
E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200922)
HIX0200922
HIT000534880_02 (
ENST00000436946
)
(Cutaneous T-cell lymphoma-associated antigen 4; Protein cTAGE-4;)
genome : 132,029,581 - 132,032,206 (2,626)
query : 1 - 2,626 (2,626/2,626)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 9, E.R. 7, nucl 4.5, pero 4,
E.R._mito 4, E.R._golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200922)
HIX0200922
HIT000316597_02 (
NM_001008747
)
(CTAGE6-like.)
genome : 132,029,581 - 132,032,174 (2,594)
query : 1 - 2,587 (2,587/2,587)
1 exon
identity = 0.975
3'(0.975)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 9, E.R. 7, pero 4, E.R._mito 4,
E.R._golg 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200922)
HIX0200922
HIT000561447 (
NM_001145659
)
(Cutaneous T-cell lymphoma-associated antigen 4; Protein cTAGE-4;)
genome : 132,029,581 - 132,032,157 (2,577)
query : 1 - 2,577 (2,577/2,577)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, E.R. 7.5, cyto_nucl 7, pero 7, nucl 4.5,
E.R._mito 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200922)
HIX0200922
HIT000590093_01 (
ENST00000486333
)
(Cutaneous T-cell lymphoma-associated antigen 4; Protein cTAGE-4;)
genome : 132,029,608 - 132,032,195 (2,588)
query : 1 - 2,588 (2,588/2,588)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 9, E.R. 7, nucl 4.5, pero 4,
E.R._mito 4, E.R._golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200922)
HIX0200922
HIT000590893_01 (
ENST00000487179
)
(Cutaneous T-cell lymphoma-associated antigen 4; Protein cTAGE-4;)
genome : 132,029,608 - 132,032,195 (2,588)
query : 1 - 2,588 (2,588/2,588)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 9, E.R. 7, nucl 5.5, pero 4,
E.R._mito 4, E.R._golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200922)
HIX0200922
HIT000575155_01 (
ENST00000470691
)
(CTAGE6-like.)
genome : 132,029,739 - 132,032,157 (2,419)
query : 1 - 2,411 (2,411/2,411)
1 exon
identity = 0.975
3'(0.975)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 9, E.R. 7, pero 4, E.R._mito 4,
E.R._golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200922)
HIX0200922
HIT000386354
(
BC101322
)
Representative transcript
(Cutaneous T-cell lymphoma-associated antigen 9.)
genome : 132,029,870 - 132,031,507 (1,638)
query : 1 - 1,638 (1,638/1,638)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13.1667, cyto_golg 11.3333,
nucl 8.5, cyto_mito 8.5, cyto_plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200922)
HIX0006217
HIT000656548 (
NM_001199389
)
(Band 4.1-like protein 2; Generally expressed protein 4.1; 4.1G;)
genome : 131,160,489 - 131,291,623 (131,135)
query : 1 - 4,029 (4,029/4,051)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000307066
(
CR936793
)
(Band 4.1-like protein 2 isoform d.)
genome : 131,160,489 - 131,321,907 (161,419)
query : 1 - 3,661 (3,661/3,680)
17 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;0.998;1.000)5'
coverage = 0.999
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR008379 : Band 4.1, C-terminal
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR014847 : FERM adjacent (FA)
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0003779 : Molecular Function : actin binding
0005198 : Molecular Function : structural molecule activity
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000062884
(
AF027299
)
Representative transcript
(Band 4.1-like protein 2; Generally expressed protein 4.1; 4.1G;)
genome : 131,160,489 - 131,277,640 (117,152)
query : 30 - 4,317 (4,288/4,336)
19 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.993
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR007477 : SAB domain
IPR008379 : Band 4.1, C-terminal
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR014847 : FERM adjacent (FA)
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0003779 : Molecular Function : actin binding
0005198 : Molecular Function : structural molecule activity
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
0030866 : Biological Process : cortical actin cytoskeleton organization
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK144088
Pongo
sp. (Orangutan) : CR858412
Equus
sp. (Horse) : ENSECAT00000014308
Oryzias
sp. (Medaka) : ENSORLT00000006211
Oryzias
sp. (Medaka) : ENSORLT00000021473
Tetraodon
sp. (Tetraodon) : GSTENT00020687001
Takifugu
sp. (Fugu) : SINFRUT00000140347
Macaca
sp. (Macaque) : XM_001104857
Monodelphis
sp. (Opossum) : XM_001369815
Rattus
sp. (Rat) : XM_220117
Pan
sp. (Chimpanzee) : XM_518738
Canis
sp. (Dog) : XM_859128
Bos
sp. (Cow) : XR_027542
HIX0006217
HIT000306302
(
CR749262
)
(Band 4.1-like protein 2 isoform d.)
genome : 131,160,491 - 131,321,869 (161,379)
query : 1 - 3,621 (3,621/3,641)
17 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.977;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR008379 : Band 4.1, C-terminal
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR014847 : FERM adjacent (FA)
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0003779 : Molecular Function : actin binding
0005198 : Molecular Function : structural molecule activity
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000560104 (
NM_001135554
)
(Band 4.1-like protein 2 isoform b.)
genome : 131,160,489 - 131,384,462 (223,974)
query : 1 - 3,459 (3,459/3,473)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000560105 (
NM_001135555
)
(Band 4.1-like protein 2 isoform b.)
genome : 131,160,489 - 131,384,462 (223,974)
query : 1 - 3,472 (3,472/3,486)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000656547 (
NM_001199388
)
(Band 4.1-like protein 2; Generally expressed protein 4.1; 4.1G;)
genome : 131,160,489 - 131,384,462 (223,974)
query : 1 - 4,009 (4,009/4,023)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000051215
(
BC034718
)
(Band 4.1-like protein 2; Generally expressed protein 4.1; 4.1G;)
genome : 131,160,489 - 131,384,365 (223,877)
query : 1 - 3,911 (3,911/3,925)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.997;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR008379 : Band 4.1, C-terminal
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR014847 : FERM adjacent (FA)
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0003779 : Molecular Function : actin binding
0005198 : Molecular Function : structural molecule activity
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000723338 (
NM_001252660
)
(Band 4.1-like protein 2 isoform d.)
genome : 131,160,489 - 131,321,907 (161,419)
query : 1 - 3,661 (3,661/3,675)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000130352 (
ENST00000337057
)
(Band 4.1-like protein 2; Generally expressed protein 4.1; 4.1G;)
genome : 131,160,487 - 131,384,462 (223,976)
query : 1 - 4,457 (4,457/4,457)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000198409 (
NM_001431
)
(Band 4.1-like protein 2; Generally expressed protein 4.1; 4.1G;)
genome : 131,160,487 - 131,384,462 (223,976)
query : 1 - 4,457 (4,457/4,457)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000543824 (
ENST00000445890
)
(Band 4.1-like protein 2 isoform d.)
genome : 131,160,487 - 131,384,443 (223,957)
query : 1 - 3,677 (3,677/3,677)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000629629 (
ENST00000530481
)
(Band 4.1-like protein 2; Generally expressed protein 4.1; 4.1G;)
genome : 131,160,487 - 131,384,365 (223,879)
query : 1 - 3,914 (3,914/3,914)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000627464 (
ENST00000528282
)
(Band 4.1-like protein 2 isoform d.)
genome : 131,160,487 - 131,321,907 (161,421)
query : 1 - 3,663 (3,663/3,663)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000630538 (
ENST00000531410
)
(Band 4.1-like protein 2 isoform d.)
genome : 131,160,487 - 131,203,022 (42,536)
query : 1 - 2,926 (2,926/2,926)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, cyto 11.5, extr 10, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000329457
(
AB209522
)
(Band 4.1-like protein 2 isoform b.)
genome : 131,160,490 - 131,384,373 (223,884)
query : 1 - 3,369 (3,369/3,369)
15 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR008379 : Band 4.1, C-terminal
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR014847 : FERM adjacent (FA)
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0003779 : Molecular Function : actin binding
0005198 : Molecular Function : structural molecule activity
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000475910 (
ENST00000392427
)
(Band 4.1-like protein 2 isoform b.)
genome : 131,160,490 - 131,384,373 (223,884)
query : 1 - 3,369 (3,369/3,369)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000046961
(
AK127088
)
(Band 4.1-like protein 2 isoform d.)
genome : 131,160,490 - 131,204,234 (43,745)
query : 1 - 4,360 (4,360/4,360)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)5'
coverage = 1.000
InterPro :
IPR007477 : SAB domain
IPR008379 : Band 4.1, C-terminal
GO :
0003779 : Molecular Function : actin binding
0005198 : Molecular Function : structural molecule activity
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0030866 : Biological Process : cortical actin cytoskeleton organization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.3333, cyto_pero 11.1667,
extr 6, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000629900 (
ENST00000530757
)
(Band 4.1-like protein 2 isoform d.)
genome : 131,160,490 - 131,204,234 (43,745)
query : 1 - 4,360 (4,360/4,360)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.3333, cyto_pero 11.1667,
extr 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000349408 (
ENST00000368128
)
(Band 4.1-like protein 2; Generally expressed protein 4.1; 4.1G;)
genome : 131,160,492 - 131,384,458 (223,967)
query : 1 - 4,456 (4,456/4,456)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000626611 (
ENST00000527411
)
(Band 4.1-like protein 2 isoform d.)
genome : 131,160,493 - 131,384,398 (223,906)
query : 1 - 4,186 (4,186/4,186)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000490582
(
AK295958
)
(Band 4.1-like protein 2 isoform a.)
genome : 131,161,224 - 131,216,149 (54,926)
query : 1 - 1,733 (1,733/1,733)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.990;1.000)5'
coverage = 1.000
InterPro :
IPR008379 : Band 4.1, C-terminal
GO :
0003779 : Molecular Function : actin binding
0005198 : Molecular Function : structural molecule activity
0005856 : Cellular Component : cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cysk 9, nucl 6, cyto_nucl 6, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000255068
(
AY512660
)
(Band 4.1-like protein 2 isoform a.)
genome : 131,161,275 - 131,203,203 (41,929)
query : 1 - 3,090 (3,090/3,124)
9 exons
identity = 0.998
3'(0.998;1.000;0.988;1.000;1.000;0.998;1.000;
1.000;0.999)5'
coverage = 0.989
InterPro :
IPR007477 : SAB domain
IPR008379 : Band 4.1, C-terminal
GO :
0003779 : Molecular Function : actin binding
0005198 : Molecular Function : structural molecule activity
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0030866 : Biological Process : cortical actin cytoskeleton organization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 14, cyto 11, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000623834 (
ENST00000524581
)
(Band 4.1-like protein 2 isoform a.)
genome : 131,161,275 - 131,203,203 (41,929)
query : 1 - 3,090 (3,090/3,090)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 14, cyto 11, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000489748
(
AK295124
)
(Band 4.1-like protein 2 isoform b.)
genome : 131,161,322 - 131,384,391 (223,070)
query : 1 - 2,568 (2,568/2,568)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR008379 : Band 4.1, C-terminal
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR014847 : FERM adjacent (FA)
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0003779 : Molecular Function : actin binding
0005198 : Molecular Function : structural molecule activity
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000624514 (
ENST00000525271
)
(Band 4.1-like protein 2 isoform b.)
genome : 131,161,322 - 131,384,391 (223,070)
query : 1 - 2,568 (2,568/2,568)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000083810
(
AY047584
)
(Band 4.1-like protein 2; Generally expressed protein 4.1; 4.1G;)
genome : 131,161,700 - 131,277,633 (115,934)
query : 1 - 3,070 (3,070/3,070)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR007477 : SAB domain
IPR008379 : Band 4.1, C-terminal
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR014847 : FERM adjacent (FA)
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0003779 : Molecular Function : actin binding
0005198 : Molecular Function : structural molecule activity
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
0030866 : Biological Process : cortical actin cytoskeleton organization
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000628372 (
ENST00000529208
)
(Band 4.1-like protein 2 isoform d.)
genome : 131,179,276 - 131,291,623 (112,348)
query : 1 - 3,023 (3,023/3,023)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000624437 (
ENST00000525193
)
(Band 4.1-like protein 2 isoform d.)
genome : 131,179,276 - 131,277,625 (98,350)
query : 1 - 2,121 (2,121/2,121)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 10, mito_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000626854 (
ENST00000527659
)
(Band 4.1-like protein 2; Generally expressed protein 4.1; 4.1G;)
genome : 131,179,276 - 131,277,625 (98,350)
query : 1 - 2,436 (2,436/2,436)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0006217
HIT000626223 (
ENST00000527017
)
(Band 4.1-like protein 2 isoform d.)
genome : 131,184,777 - 131,201,630 (16,854)
query : 1 - 710 (710/728)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 16.5, nucl 7.5, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006217)
HIX0217165
HIT000529909 (
ENST00000431975
)
(A-kinase anchor protein 7 isoform gamma; AKAP-7 isoform gamma; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoform gamma; PRKA7 isoform gamma;)
genome : 131,456,806 - 131,604,675 (147,870)
query : 1 - 2,954 (2,954/2,954)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217165)
HIX0217165
HIT000206098 (
NM_016377
)
(A-kinase anchor protein 7 isoform gamma; AKAP-7 isoform gamma; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoform gamma; PRKA7 isoform gamma;)
genome : 131,456,826 - 131,604,675 (147,850)
query : 1 - 2,934 (2,934/2,943)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.5, nucl 12.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217165)
HIX0217165
HIT000495211
(
AK300587
)
Representative transcript
(A-kinase anchor protein 7 isoform gamma; AKAP-7 isoform gamma; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoform gamma; PRKA7 isoform gamma;)
genome : 131,456,871 - 131,603,025 (146,155)
query : 1 - 1,239 (1,239/1,239)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR009097 : RNA ligase/cyclic nucleotide phosphodiesterase
IPR019510 : Protein kinase A anchor protein, nuclear localisation signal domain
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
GO :
0003824 : Molecular Function : catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.5, nucl 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217165)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY301068
Rattus
sp. (Rat) : BC098632
Bos
sp. (Cow) : BC148038
Gallus
sp. (Chicken) : BX929377
Equus
sp. (Horse) : ENSECAT00000023472
Takifugu
sp. (Fugu) : SINFRUT00000160125
Macaca
sp. (Macaque) : XM_001103953
Monodelphis
sp. (Opossum) : XM_001380336
Pan
sp. (Chimpanzee) : XM_518739
Canis
sp. (Dog) : XM_541245
HIX0217165
HIT000640695 (
ENST00000541650
)
(A-kinase anchor protein 7 isoform gamma; AKAP-7 isoform gamma; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoform gamma; PRKA7 isoform gamma;)
genome : 131,456,877 - 131,604,672 (147,796)
query : 1 - 2,008 (2,008/2,008)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15.5, cyto 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217165)
HIX0217165
HIT000071839
(
AF152929
)
(A-kinase anchor protein 7 isoform gamma; AKAP-7 isoform gamma; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoform gamma; PRKA7 isoform gamma;)
genome : 131,466,461 - 131,604,673 (138,213)
query : 1 - 2,800 (2,800/2,822)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR009097 : RNA ligase/cyclic nucleotide phosphodiesterase
IPR019510 : Protein kinase A anchor protein, nuclear localisation signal domain
IPR019511 : Protein kinase A anchor protein, RI-RII subunit-binding domain
GO :
0003824 : Molecular Function : catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217165)
HIX0217165
HIT000349403 (
ENST00000368123
)
(A-kinase anchor protein 7 isoform gamma; AKAP-7 isoform gamma; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoform gamma; PRKA7 isoform gamma;)
genome : 131,466,461 - 131,604,673 (138,213)
query : 1 - 2,799 (2,799/2,799)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217165)
HIX0217165
HIT000634195 (
ENST00000535150
)
(A-kinase anchor protein 7 isoform gamma; AKAP-7 isoform gamma; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoform gamma; PRKA7 isoform gamma;)
genome : 131,485,476 - 131,603,984 (118,509)
query : 1 - 1,041 (1,041/1,041)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, cyto 10, nucl 8, extr 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217165)
HIX0217165
HIT000636913 (
ENST00000537868
)
(A-kinase anchor protein 7 isoforms delta and gamma; AKAP-7 isoforms delta and gamma; A-kinase anchor protein 18; AKAP-18; Protein kinase A-anchoring protein 7 isoforms delta and gamma; PRKA7 isoforms delta and gamma;)
genome : 131,521,131 - 131,604,324 (83,194)
query : 1 - 1,006 (1,006/1,006)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13, extr 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217165)
HIX0217165
HIT000108723 (
ENST00000263050
)
(A-kinase anchor protein 7 isoforms alpha and beta; AKAP-7 isoforms alpha and beta; A-kinase anchor protein 18 kDa; AKAP 18; Protein kinase A-anchoring protein 7 isoforms alpha/beta; PRKA7 isoforms alpha/beta;)
genome : 131,521,967 - 131,604,675 (82,709)
query : 1 - 2,238 (2,238/2,238)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11, mito 8, extr 5, nucl 4,
E.R._mito 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217165)
HIX0006221
HIT000260061
(
BC060759
)
(Mediator of RNA polymerase II transcription subunit 23 isoform b.)
genome : 131,895,110 - 131,949,323 (54,214)
query : 1 - 4,537 (4,537/4,565)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, nucl 7.5, E.R. 5, plas 3,
E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000025372
(
AL136776
)
Representative transcript
(Mediator of RNA polymerase II transcription subunit 23 isoform b.)
genome : 131,895,107 - 131,949,345 (54,239)
query : 1 - 4,581 (4,581/4,600)
30 exons
identity = 0.997
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.883;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC050916
Danio
sp. (Zebrafish) : BC080264
Rattus
sp. (Rat) : BC090022
Canis
sp. (Dog) : ENSCAFT00000000597
Equus
sp. (Horse) : ENSECAT00000026659
Monodelphis
sp. (Opossum) : ENSMODT00000022315
Oryzias
sp. (Medaka) : ENSORLT00000021406
Pongo
sp. (Orangutan) : ENSPPYT00000019797
Tetraodon
sp. (Tetraodon) : GSTENT00020681001
Takifugu
sp. (Fugu) : SINFRUT00000164977
Pan
sp. (Chimpanzee) : XM_527503
Bos
sp. (Cow) : XM_591317
HIX0006221
HIT000205761 (
NM_015979
)
(Mediator of RNA polymerase II transcription subunit 23 isoform b.)
genome : 131,895,107 - 131,949,379 (54,273)
query : 1 - 4,614 (4,614/4,630)
30 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.883;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000724752 (
NM_001270521
)
(Mediator of RNA polymerase II transcription subunit 23 isoform c.)
genome : 131,895,107 - 131,949,379 (54,273)
query : 1 - 4,596 (4,596/4,612)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000308848 (
ENST00000354577
)
(Mediator of RNA polymerase II transcription subunit 23 isoform b.)
genome : 131,895,106 - 131,949,345 (54,240)
query : 1 - 4,581 (4,581/4,581)
30 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.883;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000069477
(
AF105332
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,907,891 - 131,949,294 (41,404)
query : 15 - 5,155 (5,141/5,176)
29 exons
identity = 0.999
3'(0.999;1.000;1.000;0.995;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.991;1.000;1.000;1.000;
1.000)5'
coverage = 0.993
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, nucl 7.5, E.R. 5, plas 3,
E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000349348 (
ENST00000368068
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,907,873 - 131,949,369 (41,497)
query : 1 - 5,233 (5,233/5,233)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, nucl 7.5, E.R. 5, plas 3,
E.R._golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000504627 (
ENST00000403834
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,907,873 - 131,949,363 (41,491)
query : 1 - 5,245 (5,245/5,245)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, nucl 7.5, E.R. 5, plas 3,
E.R._golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000000932
(
AB033042
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,907,873 - 131,949,348 (41,476)
query : 1 - 5,212 (5,212/5,212)
29 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, nucl 7.5, E.R. 5, plas 3,
E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000201560 (
NM_004830
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,907,878 - 131,949,379 (41,502)
query : 1 - 5,238 (5,238/5,240)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, nucl 7.5, E.R. 5, plas 3,
E.R._golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000724753 (
NM_001270522
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,907,878 - 131,949,379 (41,502)
query : 1 - 4,467 (4,467/4,469)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000557731
(
EU392521
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,907,888 - 131,924,228 (16,341)
query : 1 - 873 (873/873)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.8333, extr 11, nucl 11, cyto 8.5,
cyto_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000557733
(
EU392523
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,907,888 - 131,924,228 (16,341)
query : 1 - 426 (426/426)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10.8333, nucl 8, cyto 7.5,
extr_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000557734
(
EU392524
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,907,888 - 131,924,228 (16,341)
query : 1 - 505 (505/505)
3 exons
identity = 0.996
3'(1.000;0.988;1.000)5'
coverage = 1.000
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 9, nucl 6, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000349340 (
ENST00000368060
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,907,889 - 131,949,369 (41,481)
query : 1 - 4,446 (4,446/4,446)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000349338 (
ENST00000368058
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,908,385 - 131,949,206 (40,822)
query : 1 - 4,576 (4,576/4,576)
29 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.883;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000499335
(
AK304711
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,908,565 - 131,931,335 (22,771)
query : 1 - 3,290 (3,290/3,290)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.986;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10.5, plas 5, nucl 3.5, pero 3,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000645002 (
ENST00000545957
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,908,565 - 131,931,335 (22,771)
query : 1 - 3,290 (3,290/3,290)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10.5, plas 5, nucl 3.5, pero 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000433896
(
AK315030
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,908,819 - 131,949,259 (40,441)
query : 2 - 4,178 (4,177/4,178)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, nucl 7.5, E.R. 5, plas 3,
E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000071029
(
AF135022
)
(Mediator of RNA polymerase II transcription subunit 23 isoform d.)
genome : 131,908,847 - 131,949,189 (40,343)
query : 1 - 4,079 (4,079/4,095)
29 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;0.980;1.000;1.000;1.000;1.000;0.982;
0.986;1.000;1.000;1.000;1.000;0.989;1.000;
1.000)5'
coverage = 0.996
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, nucl 7.5, E.R. 5, plas 3,
E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000639591 (
ENST00000540546
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,919,391 - 131,949,363 (29,973)
query : 1 - 2,835 (2,835/2,835)
20 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.910;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, nucl 7.5, plas 4, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000069414
(
AF104255
)
(Mediator of RNA polymerase II transcription subunit 23 isoform b.)
genome : 131,919,391 - 131,949,339 (29,949)
query : 1 - 2,811 (2,811/2,811)
20 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.883;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11, nucl 7.5, E.R. 5, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000349333 (
ENST00000368053
)
(Mediator of RNA polymerase II transcription subunit 23 isoform b.)
genome : 131,919,391 - 131,949,339 (29,949)
query : 1 - 2,811 (2,811/2,811)
20 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.883;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11, nucl 7.5, E.R. 5, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000557730
(
EU392520
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,919,824 - 131,949,299 (29,476)
query : 1 - 1,187 (1,187/1,187)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto_nucl 7, nucl 6, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000557732
(
EU392522
)
(Mediator complex, subunit Med23 family protein.)
genome : 131,919,824 - 131,949,299 (29,476)
query : 1 - 727 (727/727)
6 exons
identity = 0.988
3'(1.000;1.000;1.000;1.000;0.983;0.892)5'
coverage = 1.000
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13.5, nucl 5.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000557737
(
EU392527
)
(Mediator of RNA polymerase II transcription subunit 23; Mediator complex subunit 23;)
genome : 131,919,824 - 131,949,299 (29,476)
query : 1 - 1,206 (1,206/1,206)
8 exons
identity = 0.975
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.812;
0.950)5'
coverage = 1.000
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 6.83333, cyto_pero 6.66667,
cyto 6.5, pero 5.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000557742
(
EU392532
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,919,824 - 131,949,299 (29,476)
query : 1 - 804 (804/804)
6 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.983;0.993)5'
coverage = 1.000
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13.5, nucl 5.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000557736
(
EU392526
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,923,439 - 131,949,200 (25,762)
query : 1 - 1,636 (1,636/1,636)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR021629 : Mediator complex, subunit Med23
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, nucl 6.5, plas 3, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000557738
(
EU392528
)
(Mediator of RNA polymerase II transcription subunit 23; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; mSur-2;)
genome : 131,923,439 - 131,949,200 (25,762)
query : 1 - 641 (641/641)
6 exons
identity = 0.972
3'(1.000;1.000;1.000;0.888;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000557739
(
EU392529
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,923,439 - 131,949,200 (25,762)
query : 1 - 532 (532/532)
5 exons
identity = 0.955
3'(1.000;1.000;1.000;0.712;0.980)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, cyto 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000557740
(
EU392530
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,923,439 - 131,949,200 (25,762)
query : 1 - 511 (511/511)
5 exons
identity = 0.971
3'(1.000;1.000;1.000;0.750;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000557741
(
EU392531
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,923,439 - 131,949,200 (25,762)
query : 1 - 502 (502/502)
5 exons
identity = 0.974
3'(1.000;1.000;1.000;0.755;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
HIX0006221
HIT000638203 (
ENST00000539158
)
(Mediator of RNA polymerase II transcription subunit 23; Activator-recruited cofactor 130 kDa component; ARC130; Cofactor required for Sp1 transcriptional activation subunit 3; CRSP complex subunit 3; Mediator complex subunit 23; Protein sur-2 homolog; hSur-2; Transcriptional coactivator CRSP130; Vitamin D3 receptor-interacting protein complex 130 kDa component; DRIP130;)
genome : 131,923,439 - 131,949,200 (25,762)
query : 1 - 1,636 (1,636/1,636)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, nucl 6.5, plas 3, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006221)
AL355581.14
130500001-130557864 F +
NCBI
AL121947.14
130557865-130696761 F +
NCBI
AL450330.3
130696762-130711498 F +
NCBI
AL137185.7
130711499-130752901 F +
NCBI
AL137251.5
130752902-130875155 F +
NCBI
AL357274.9
130875156-131008620 F +
NCBI
AL583803.2
131008621-131040989 F +
NCBI
AL590013.1
131040990-131062507 F +
NCBI
AL109938.8
131062508-131164914 F +
NCBI
AL590014.1
131164915-131206766 F +
NCBI
AL358943.13
131206767-131328021 F +
NCBI
AL357496.18
131328022-131397224 F +
NCBI
AL137222.17
131397225-131507848 F +
NCBI
AL136110.17
131507849-131578927 F +
NCBI
AL137063.11
131578928-131710379 F +
NCBI
AL049546.3
131710380-131780843 F +
NCBI
AL445249.4
131780844-131820935 F +
NCBI
AL121575.24
131820936-131963271 F +
NCBI
AL355150.11
131963272-131983324 F +
NCBI
AC005587.1
131983325-132100000 F -
NCBI