bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0033007
HIT000197886 (
NM_000876
)
genome : 160,390,131 - 160,527,583 (137,453)
query : 1 - 9,091 (9,091/9,093)
48 exons
identity = 0.999
5'(1.000;1.000;0.996;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033007
HIT000325277
(
Y00285
)
genome : 160,390,131 - 160,527,583 (137,453)
query : 1 - 9,088 (9,088/9,090)
48 exons
identity = 0.998
5'(1.000;1.000;0.996;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033007
HIT000310875 (
ENST00000356956
)
genome : 160,390,131 - 160,527,583 (137,453)
query : 1 - 9,091 (9,091/9,091)
48 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033007
HIT000191166
(
J03528
)
genome : 160,390,132 - 160,527,581 (137,450)
query : 1 - 9,081 (9,081/9,081)
48 exons
identity = 0.996
5'(1.000;1.000;0.996;0.985;0.991;1.000;0.979;
1.000;0.993;0.971;0.995)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033007
HIT000329603
(
AB209668
)
genome : 160,412,296 - 160,526,531 (114,236)
query : 1 - 7,662 (7,662/7,662)
47 exons
identity = 0.998
5'(1.000;1.000;0.996;1.000;0.983;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033007
HIT000495472
(
AK300848
)
genome : 160,499,232 - 160,510,981 (11,750)
query : 20 - 867 (848/867)
7 exons
identity = 0.989
5'(1.000;0.992;0.871;1.000;1.000;1.000)3'
coverage = 0.978
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033007
HIT000216923
(
S80797
)
genome : 160,505,202 - 160,505,410 (209)
query : 1 - 209 (209/225)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.929
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033007
HIT000580057 (
ENST00000475834
)
genome : 160,506,093 - 160,511,372 (5,280)
query : 1 - 758 (758/758)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0032844
HIT000398527 (
NR_003288
)
genome : 160,514,114 - 160,517,244 (3,131)
query : 1 - 3,131 (3,131/3,131)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032844)
HIX0032844
HIT000682045 (
ENST00000569097
)
genome : 160,514,114 - 160,517,244 (3,131)
query : 1 - 3,131 (3,131/3,131)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032844)
HIX0032844
HIT000022186
(
AK097332
)
genome : 160,514,114 - 160,515,929 (1,816)
query : 1 - 1,816 (1,816/1,816)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032844)
HIX0032844
HIT000092701
(
BC032536
)
genome : 160,514,153 - 160,515,930 (1,778)
query : 1 - 1,778 (1,778/1,798)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032844)
HIX0032844
HIT000347553 (
ENST00000366273
)
genome : 160,514,455 - 160,515,025 (571)
query : 1 - 571 (571/571)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032844)
HIX0006348
HIT000021588
(
AK096733
)
genome : 160,515,069 - 160,517,244 (2,176)
query : 1 - 2,176 (2,176/2,176)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006348)
HIX0033007
HIT000579818 (
ENST00000475584
)
genome : 160,517,479 - 160,534,539 (17,061)
query : 1 - 597 (597/597)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033155
HIT000087444
(
BC010121
)
genome : 160,529,651 - 160,532,533 (2,883)
query : 1 - 2,883 (2,883/2,900)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033155)
HIX0032993
HIT000348243 (
ENST00000366963
)
genome : 160,542,821 - 160,579,750 (36,930)
query : 1 - 1,948 (1,948/1,948)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000199924 (
NM_003057
)
genome : 160,542,863 - 160,579,749 (36,887)
query : 1 - 1,905 (1,905/1,921)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000214194 (
NM_153187
)
genome : 160,542,863 - 160,579,749 (36,887)
query : 1 - 1,792 (1,792/1,808)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000325074
(
X98332
)
genome : 160,542,896 - 160,579,749 (36,854)
query : 1 - 1,872 (1,872/1,888)
11 exons
identity = 0.999
5'(0.998;0.990;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000388956
(
BC126364
)
genome : 160,542,897 - 160,579,635 (36,739)
query : 1 - 1,757 (1,757/1,757)
11 exons
identity = 0.999
5'(1.000;0.990;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000422684
(
AK289887
)
genome : 160,542,905 - 160,579,748 (36,844)
query : 1 - 1,859 (1,859/1,859)
11 exons
identity = 0.996
5'(0.996;0.990;1.000;1.000;1.000;1.000;0.981;
1.000;0.991;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000221327
(
U77086
)
genome : 160,542,918 - 160,579,749 (36,832)
query : 4 - 1,853 (1,850/1,870)
11 exons
identity = 0.998
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000638308 (
ENST00000539263
)
genome : 160,542,931 - 160,579,614 (36,684)
query : 1 - 1,598 (1,598/1,598)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000565815 (
ENST00000460902
)
genome : 160,542,968 - 160,579,748 (36,781)
query : 1 - 1,484 (1,484/1,484)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000555404 (
ENST00000457470
)
genome : 160,542,968 - 160,579,614 (36,647)
query : 1 - 1,452 (1,452/1,452)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000124047 (
ENST00000324965
)
genome : 160,542,968 - 160,579,583 (36,616)
query : 1 - 1,521 (1,521/1,521)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000639488 (
ENST00000540443
)
genome : 160,550,793 - 160,555,039 (4,247)
query : 1 - 653 (653/653)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000582704 (
ENST00000478607
)
genome : 160,576,986 - 160,579,750 (2,765)
query : 1 - 324 (324/324)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0201002
HIT000504036 (
ENST00000402250
)
genome : 160,584,571 - 160,584,787 (217)
query : 1 - 217 (217/217)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201002)
HIX0025014
HIT000590643 (
ENST00000486916
)
genome : 160,592,093 - 160,666,573 (74,481)
query : 1 - 1,017 (1,017/1,017)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025014)
HIX0025014
HIT000052287
(
BC039899
)
genome : 160,637,795 - 160,679,844 (42,050)
query : 1 - 2,389 (2,389/2,446)
11 exons
identity = 0.997
3'(0.993;0.990;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025014)
HIX0025014
HIT000061247
(
AB075951
)
genome : 160,637,795 - 160,679,962 (42,168)
query : 6 - 3,684 (3,679/3,694)
10 exons
identity = 0.997
3'(0.997;0.990;1.000;0.997;1.000;1.000;0.994;
1.000;1.000;0.997)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025014)
HIX0025014
HIT000348233 (
ENST00000366953
)
genome : 160,637,794 - 160,680,048 (42,255)
query : 1 - 2,597 (2,597/2,597)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025014)
HIX0025014
HIT000199925 (
NM_003058
)
genome : 160,637,794 - 160,679,963 (42,170)
query : 1 - 2,512 (2,512/2,512)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025014)
HIX0025014
HIT000325075
(
X98333
)
genome : 160,638,038 - 160,679,933 (41,896)
query : 1 - 2,237 (2,237/2,257)
11 exons
identity = 0.996
3'(0.988;0.990;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;0.998)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025014)
HIX0025014
HIT000601774 (
ENST00000498556
)
genome : 160,638,046 - 160,639,316 (1,271)
query : 1 - 735 (735/735)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025014)
HIX0025014
HIT000423584
(
AK290787
)
genome : 160,638,353 - 160,679,867 (41,515)
query : 1 - 1,857 (1,857/1,857)
11 exons
identity = 0.998
3'(1.000;0.990;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;0.998)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025014)
HIX0025014
HIT000594629 (
ENST00000491092
)
genome : 160,638,485 - 160,679,790 (41,306)
query : 1 - 1,544 (1,544/1,544)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025014)
HIX0025014
HIT000578555 (
ENST00000474259
)
genome : 160,664,741 - 160,679,821 (15,081)
query : 1 - 442 (442/442)
4 exons
identity = 0.989
3'(1.000;1.000;0.913;0.995)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025014)
HIX0025014
HIT000348232 (
ENST00000366952
)
genome : 160,665,217 - 160,698,670 (33,454)
query : 1 - 3,737 (3,737/3,737)
8 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025014)
HIX0025014
HIT000259021
(
BC030978
)
genome : 160,670,198 - 160,679,963 (9,766)
query : 1 - 2,229 (2,229/2,260)
3 exons
identity = 0.998
3'(0.997;1.000;1.000)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025014)
HIX0025014
HIT000593241 (
ENST00000489644
)
genome : 160,678,782 - 160,679,771 (990)
query : 1 - 628 (628/628)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025014)
HIX0165568
HIT000517130 (
ENST00000419196
)
genome : 160,693,649 - 160,697,162 (3,514)
query : 1 - 467 (467/467)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165568)
HIX0184514
pHIT000078696 ( pHIT000078696 )
genome : 160,719,617 - 160,750,534 (30,918)
query : 1 - 309 (309/309)
3 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0184514)
CAGE tag :
H09BA82M1603
HIX0032767
HIT000111291 (
ENST00000275300
)
genome : 160,769,300 - 160,873,613 (104,314)
query : 1 - 3,348 (3,348/3,348)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032767)
HIX0032767
HIT000502705
(
BC144280
)
genome : 160,769,366 - 160,874,860 (105,495)
query : 1 - 4,431 (4,431/4,431)
10 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032767)
HIX0032767
HIT000208524 (
NM_021977
)
genome : 160,769,405 - 160,873,611 (104,207)
query : 1 - 3,241 (3,241/3,245)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032767)
HIX0032767
HIT000433456
(
AK314590
)
genome : 160,769,410 - 160,872,088 (102,679)
query : 1 - 1,713 (1,713/1,713)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032767)
HIX0032767
HIT000475639 (
ENST00000392145
)
genome : 160,769,425 - 160,876,014 (106,590)
query : 1 - 5,627 (5,627/5,627)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.973;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032767)
HIX0032767
HIT000243871
(
AJ001417
)
genome : 160,769,425 - 160,873,603 (104,179)
query : 1 - 3,213 (3,213/3,213)
11 exons
identity = 0.998
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.996)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032767)
HIX0032767
HIT000055509
(
BX640965
)
genome : 160,867,666 - 160,873,604 (5,939)
query : 1 - 5,943 (5,943/5,959)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032767)
HIX0032767
HIT000066276
(
AF078749
)
genome : 160,868,776 - 160,873,604 (4,829)
query : 1 - 1,652 (1,652/1,664)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032767)
HIX0216785
HIT000045699
(
AK125826
)
genome : 160,869,931 - 160,873,611 (3,681)
query : 1 - 3,685 (3,685/3,685)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216785)
HIX0216785
HIT000021835
(
AK096980
)
genome : 160,873,425 - 160,876,013 (2,589)
query : 1 - 2,589 (2,589/2,589)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216785)
HIX0216785
HIT000045783
(
AK125910
)
genome : 160,873,463 - 160,904,401 (30,939)
query : 2 - 3,608 (3,607/3,608)
6 exons
identity = 0.999
3'(0.996;0.988;1.000;1.000;0.999;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216785)
HIX0216994
HIT000339609
(
BC110570
)
genome : 160,905,096 - 160,932,083 (26,988)
query : 1 - 959 (959/976)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.983
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216994)
HIX0057735
HIT000202259 (
NM_005577
)
genome : 160,952,515 - 161,087,407 (134,893)
query : 1 - 6,489 (6,489/6,489)
40 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057735)
HIX0057735
HIT000545612 (
ENST00000447678
)
genome : 160,952,515 - 161,087,407 (134,893)
query : 1 - 6,490 (6,490/6,490)
40 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057735)
HIX0057735
HIT000120838 (
ENST00000316300
)
genome : 160,952,515 - 161,085,291 (132,777)
query : 1 - 6,414 (6,414/6,414)
39 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057735)
HIX0057735
HIT000588134 (
ENST00000484276
)
genome : 160,952,521 - 160,966,510 (13,990)
query : 1 - 465 (465/465)
5 exons
identity = 0.976
3'(0.946;0.956;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057735)
HIX0057735
eHIT000020221 ( ESTsASS_6_871 )
genome : 160,961,122 - 160,969,544 (8,423)
query : 1 - 568 (568/568)
6 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057735)
ESTs used for assembly :
BF970104,BX281735,CB161915
HIX0057735
HIT000083593
(
AY039748
)
genome : 160,966,472 - 160,969,540 (3,069)
query : 7 - 280 (274/288)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.951
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057735)
HIX0057735
pHIT000012426 ( pHIT000012426 )
genome : 161,065,922 - 161,100,465 (34,544)
query : 1 - 1,191 (1,191/1,191)
10 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057735)
CAGE tag :
H27BC98E1002
HIX0057735
HIT000550585 (
ENST00000452651
)
genome : 161,087,260 - 161,097,555 (10,296)
query : 1 - 260 (260/260)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057735)
HIX0200975
HIT000546060 (
ENST00000448126
)
genome : 161,119,320 - 161,121,664 (2,345)
query : 1 - 292 (292/292)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200975)
HIX0200975
HIT000545636 (
ENST00000447702
)
genome : 161,119,525 - 161,121,664 (2,140)
query : 1 - 122 (122/122)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200975)
HIX0032909
HIT000654533_03 (
NM_001168338
)
genome : 161,123,225 - 161,132,904 (9,680)
query : 1 - 1,200 (1,200/1,200)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000309811_02 (
ENST00000355705
)
genome : 161,123,268 - 161,132,915 (9,648)
query : 1 - 1,169 (1,169/1,169)
4 exons
identity = 0.967
5'(0.992;0.949;0.972;0.965)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000123944_02 (
ENST00000324709
)
genome : 161,123,270 - 161,134,762 (11,493)
query : 1 - 3,025 (3,025/3,025)
4 exons
identity = 0.957
5'(0.983;0.956;0.972;0.956)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000313003_02 (
ENST00000359481
)
genome : 161,123,270 - 161,132,921 (9,652)
query : 1 - 1,173 (1,173/1,173)
4 exons
identity = 0.968
5'(0.991;0.949;0.972;0.967)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000348204 (
ENST00000366924
)
genome : 161,123,270 - 161,132,915 (9,646)
query : 1 - 1,166 (1,166/1,166)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000426902
(
AK308036
)
genome : 161,123,274 - 161,157,972 (34,699)
query : 1 - 1,323 (1,323/1,323)
12 exons
identity = 0.975
5'(1.000;1.000;1.000;1.000;0.867;0.850;0.993;
1.000;0.897;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000516898 (
ENST00000418964
)
genome : 161,123,278 - 161,134,058 (10,781)
query : 1 - 558 (558/558)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000398617_02 (
NR_003506
)
genome : 161,123,278 - 161,132,596 (9,319)
query : 1 - 839 (839/841)
4 exons
identity = 0.974
5'(0.981;0.956;0.972;0.977)3'
coverage = 0.998
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000508105_02 (
ENST00000410086
)
genome : 161,123,283 - 161,134,056 (10,774)
query : 1 - 500 (500/522)
5 exons
identity = 0.972
5'(0.990;0.949;0.972;0.974;1.000)3'
coverage = 0.958
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000114764 (
ENST00000297289
)
genome : 161,123,292 - 161,152,263 (28,972)
query : 1 - 435 (435/435)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000567733 (
ENST00000462918
)
genome : 161,123,300 - 161,134,408 (11,109)
query : 1 - 835 (835/835)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000586944 (
ENST00000483038
)
genome : 161,123,324 - 161,129,641 (6,318)
query : 1 - 757 (757/757)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000570355_02 (
ENST00000465668
)
genome : 161,123,335 - 161,134,056 (10,722)
query : 1 - 448 (448/449)
5 exons
identity = 0.973
5'(1.000;0.956;0.972;0.974;1.000)3'
coverage = 0.998
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000588222 (
ENST00000484367
)
genome : 161,126,420 - 161,133,311 (6,892)
query : 1 - 2,465 (2,465/2,465)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000570063_02 (
ENST00000465361
)
genome : 161,126,420 - 161,132,921 (6,502)
query : 1 - 2,077 (2,077/2,077)
3 exons
identity = 0.973
5'(0.977;0.972;0.967)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000597601_02 (
ENST00000494194
)
genome : 161,127,142 - 161,132,604 (5,463)
query : 1 - 771 (771/771)
4 exons
identity = 0.966
5'(1.000;0.949;0.972;0.968)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000597725_02 (
ENST00000494325
)
genome : 161,127,142 - 161,132,604 (5,463)
query : 1 - 772 (772/772)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000572346_03 (
ENST00000467745
)
genome : 161,127,142 - 161,129,486 (2,345)
query : 1 - 574 (574/574)
4 exons
identity = 0.976
5'(1.000;0.949;0.981;0.983)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000576103_03 (
ENST00000471691
)
genome : 161,127,407 - 161,129,349 (1,943)
query : 1 - 786 (786/786)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000387355
(
BC115369
)
genome : 161,139,691 - 161,152,868 (13,178)
query : 1 - 610 (610/618)
4 exons
identity = 0.979
5'(0.928;1.000;1.000;1.000)3'
coverage = 0.987
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0032909
HIT000596871 (
ENST00000493435
)
genome : 161,151,772 - 161,152,865 (1,094)
query : 1 - 582 (582/582)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032909)
HIX0216906
HIT000572077 (
ENST00000467466
)
genome : 161,159,467 - 161,173,285 (13,819)
query : 1 - 565 (565/565)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216906)
HIX0216906
HIT000566301 (
ENST00000461414
)
genome : 161,162,340 - 161,174,300 (11,961)
query : 1 - 569 (569/569)
3 exons
identity = 0.991
5'(1.000;0.966;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216906)
HIX0165846
HIT000552251 (
ENST00000454317
)
genome : 161,236,582 - 161,238,383 (1,802)
query : 1 - 1,190 (1,190/1,190)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165846)
HIX0164883
HIT000535795 (
ENST00000437861
)
genome : 161,293,920 - 161,301,426 (7,507)
query : 1 - 310 (310/310)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164883)
HIX0164883
HIT000552760 (
ENST00000454826
)
genome : 161,293,926 - 161,339,561 (45,636)
query : 1 - 439 (439/439)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164883)
HIX0164883
HIT000541314 (
ENST00000443380
)
genome : 161,294,048 - 161,339,481 (45,434)
query : 1 - 413 (413/413)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164883)
HIX0164883
HIT000510996 (
ENST00000413062
)
genome : 161,294,118 - 161,339,681 (45,564)
query : 1 - 332 (332/332)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164883)
HIX0201017
HIT000505282 (
ENST00000405580
)
genome : 161,326,802 - 161,334,670 (7,869)
query : 1 - 489 (489/489)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201017)
HIX0165579
HIT000518535 (
ENST00000420601
)
genome : 161,347,401 - 161,348,194 (794)
query : 1 - 379 (379/379)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165579)
HIX0184331
HIT000515413 (
ENST00000417479
)
genome : 161,352,112 - 161,390,803 (38,692)
query : 1 - 573 (573/573)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0184331)
HIX0151295
HIT000019484
(
AK094629
)
genome : 161,411,346 - 161,413,374 (2,029)
query : 1 - 2,028 (2,028/2,028)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0151295)
HIX0216925
HIT000641997 (
ENST00000542952
)
genome : 161,412,801 - 161,494,568 (81,768)
query : 1 - 629 (629/629)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216925)
HIX0216904
HIT000546053 (
ENST00000448119
)
genome : 161,443,226 - 161,455,481 (12,256)
query : 1 - 225 (225/225)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216904)
HIX0216904
HIT000544434 (
ENST00000446500
)
genome : 161,455,390 - 161,469,835 (14,446)
query : 1 - 326 (326/326)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216904)
HIX0216925
HIT000641896 (
ENST00000542851
)
genome : 161,494,361 - 161,507,476 (13,116)
query : 1 - 625 (625/625)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216925)
HIX0216925
HIT000639250 (
ENST00000540205
)
genome : 161,501,715 - 161,507,511 (5,797)
query : 1 - 574 (574/589)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.975
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216925)
HIX0216806
HIT000069940
(
AF116604
)
genome : 161,512,409 - 161,538,410 (26,002)
query : 5 - 2,206 (2,202/2,223)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.994;1.000;1.000;1.000;
0.998)3'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216806)
HIX0216806
HIT000642466 (
ENST00000543421
)
genome : 161,517,729 - 161,523,024 (5,296)
query : 1 - 581 (581/581)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216806)
HIX0216806
HIT000643778 (
ENST00000544733
)
genome : 161,519,272 - 161,529,001 (9,730)
query : 1 - 633 (633/645)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.981
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216806)
HIX0216806
HIT000640946 (
ENST00000541901
)
genome : 161,519,308 - 161,529,965 (10,658)
query : 10 - 797 (788/797)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.989
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216806)
HIX0216806
HIT000044303
(
AK124430
)
genome : 161,522,065 - 161,538,416 (16,352)
query : 1 - 2,526 (2,526/2,526)
10 exons
identity = 0.998
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216806)
HIX0216806
HIT000635897 (
ENST00000536852
)
genome : 161,522,065 - 161,538,416 (16,352)
query : 1 - 2,526 (2,526/2,526)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216806)
HIX0216806
HIT000638655 (
ENST00000539610
)
genome : 161,529,911 - 161,530,918 (1,008)
query : 1 - 295 (295/295)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216806)
HIX0018645
HIT000024910
(
AL122123
)
genome : 161,551,057 - 161,556,332 (5,276)
query : 1 - 5,272 (5,272/5,379)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000306168
(
CR627395
)
genome : 161,551,010 - 161,695,057 (144,048)
query : 2 - 7,703 (7,702/7,746)
8 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.994;1.000;0.996;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000348191 (
ENST00000366911
)
genome : 161,551,011 - 161,695,057 (144,047)
query : 1 - 7,705 (7,705/7,705)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000207741 (
NM_020133
)
genome : 161,551,057 - 161,695,107 (144,051)
query : 1 - 7,879 (7,879/7,889)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000122370 (
ENST00000320285
)
genome : 161,551,057 - 161,695,093 (144,037)
query : 1 - 7,865 (7,865/7,865)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000443000
(
DQ576469
)
genome : 161,556,801 - 161,556,830 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000088117
(
BC013410
)
genome : 161,557,138 - 161,560,582 (3,445)
query : 1 - 658 (658/737)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000027040
(
AL832128
)
genome : 161,557,106 - 161,562,653 (5,548)
query : 1 - 5,543 (5,543/5,583)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000014988
(
AK074208
)
genome : 161,557,106 - 161,695,093 (137,988)
query : 1 - 1,816 (1,816/1,847)
9 exons
identity = 0.998
3'(0.998;0.995;1.000;1.000;1.000;1.000;0.988;
1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000247761
(
AJ420473
)
genome : 161,557,106 - 161,695,070 (137,965)
query : 10 - 1,802 (1,793/1,824)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.987
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000071976
(
AF156776
)
genome : 161,557,106 - 161,695,037 (137,932)
query : 1 - 1,760 (1,760/1,774)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000252550
(
AY358506
)
genome : 161,557,106 - 161,695,038 (137,933)
query : 10 - 1,770 (1,761/1,781)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000038751
(
BC020209
)
genome : 161,557,164 - 161,695,039 (137,876)
query : 1 - 1,704 (1,704/1,721)
9 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000494345
(
AK299721
)
genome : 161,557,287 - 161,695,077 (137,791)
query : 1 - 1,133 (1,133/1,133)
6 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000555454 (
ENST00000457520
)
genome : 161,557,287 - 161,695,077 (137,791)
query : 1 - 1,133 (1,133/1,133)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000535099 (
ENST00000437165
)
genome : 161,564,988 - 161,570,321 (5,334)
query : 1 - 490 (490/490)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000490172
(
AK295548
)
genome : 161,567,555 - 161,695,051 (127,497)
query : 1 - 1,801 (1,801/1,809)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.996;1.000)5'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000348188 (
ENST00000366908
)
genome : 161,567,555 - 161,695,051 (127,497)
query : 1 - 1,801 (1,801/1,801)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000245039
(
AJ227890
)
genome : 161,570,237 - 161,653,268 (83,032)
query : 1 - 876 (876/882)
6 exons
identity = 0.997
3'(0.980;1.000;0.994;1.000;1.000;0.995)5'
coverage = 0.993
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000534213 (
ENST00000436279
)
genome : 161,570,237 - 161,653,268 (83,032)
query : 1 - 875 (875/875)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000245040
(
AJ227891
)
genome : 161,570,249 - 161,653,268 (83,020)
query : 1 - 870 (870/870)
6 exons
identity = 0.986
3'(1.000;0.994;0.988;1.000;0.994;0.961)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000492260
(
AK297636
)
genome : 161,574,693 - 161,695,096 (120,404)
query : 1 - 947 (947/947)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000348186 (
ENST00000366906
)
genome : 161,574,693 - 161,695,082 (120,390)
query : 1 - 933 (933/933)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000490450
(
AK295826
)
genome : 161,574,730 - 161,695,030 (120,301)
query : 1 - 941 (941/941)
3 exons
identity = 0.998
3'(0.997;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0018645
HIT000489649
(
AK295025
)
genome : 161,574,887 - 161,695,054 (120,168)
query : 1 - 978 (978/978)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0006353
HIT000010039
(
AK026765
)
genome : 161,581,167 - 161,583,014 (1,848)
query : 9 - 1,857 (1,849/1,901)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006353)
HIX0006353
HIT000562503 (
NR_024277
)
genome : 161,581,165 - 161,583,014 (1,850)
query : 1 - 1,850 (1,850/1,869)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006353)
HIX0006353
HIT000025304
(
AL136708
)
genome : 161,581,165 - 161,582,865 (1,701)
query : 4 - 1,704 (1,701/1,723)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006353)
HIX0006353
HIT000435114
(
BC101668
)
genome : 161,581,910 - 161,582,490 (581)
query : 1 - 581 (581/581)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006353)
HIX0006353
HIT000340420
(
BC112291
)
genome : 161,581,917 - 161,582,490 (574)
query : 1 - 574 (574/574)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006353)
HIX0018645
HIT000348185 (
ENST00000366905
)
genome : 161,586,870 - 161,695,064 (108,195)
query : 1 - 942 (942/942)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018645)
HIX0023029
HIT000348178 (
ENST00000366898
)
genome : 161,768,452 - 163,148,803 (1,380,352)
query : 1 - 4,180 (4,180/4,180)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000201306 (
NM_004562
)
genome : 161,768,590 - 163,148,834 (1,380,245)
query : 1 - 4,073 (4,073/4,073)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000204443 (
NM_013987
)
genome : 161,768,590 - 163,148,834 (1,380,245)
query : 1 - 3,989 (3,989/3,989)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000204444 (
NM_013988
)
genome : 161,768,590 - 163,148,834 (1,380,245)
query : 1 - 3,626 (3,626/3,626)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000348176 (
ENST00000366896
)
genome : 161,769,671 - 163,148,803 (1,379,133)
query : 1 - 2,514 (2,514/2,514)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000348177 (
ENST00000366897
)
genome : 161,769,671 - 163,148,803 (1,379,133)
query : 1 - 2,877 (2,877/2,877)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000058197
(
AB009973
)
genome : 161,769,671 - 162,683,800 (914,130)
query : 270 - 2,960 (2,691/2,960)
10 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 0.909
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000489308
(
AK294684
)
genome : 161,770,753 - 162,258,053 (487,301)
query : 1 - 1,115 (1,115/1,115)
7 exons
identity = 0.996
3'(0.994;1.000;0.988;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000383670
(
AB245403
)
genome : 161,770,980 - 163,148,790 (1,377,811)
query : 4 - 1,641 (1,638/1,641)
12 exons
identity = 0.998
3'(1.000;1.000;1.000;0.993;1.000)5'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000425387
(
AK292590
)
genome : 161,771,052 - 163,148,795 (1,377,744)
query : 1 - 1,572 (1,572/1,572)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000648592
(
GU361470
)
genome : 161,771,083 - 162,992,331 (1,221,249)
query : 23 - 1,561 (1,539/1,561)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.986
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000648559
(
GU345839
)
genome : 161,771,083 - 162,864,522 (1,093,440)
query : 9 - 1,379 (1,371/1,379)
10 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.994
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000648560
(
GU345840
)
genome : 161,771,083 - 162,864,522 (1,093,440)
query : 9 - 1,313 (1,305/1,313)
10 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.994
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000648588
(
GU361466
)
genome : 161,771,083 - 162,864,522 (1,093,440)
query : 9 - 1,279 (1,271/1,279)
9 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.994
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000648589
(
GU361467
)
genome : 161,771,083 - 162,864,522 (1,093,440)
query : 9 - 1,229 (1,221/1,229)
9 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.993
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000648590
(
GU361468
)
genome : 161,771,083 - 162,864,522 (1,093,440)
query : 9 - 1,010 (1,002/1,010)
8 exons
identity = 0.994
3'(1.000;1.000;1.000)5'
coverage = 0.992
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000648572
(
GU357501
)
genome : 161,771,083 - 162,475,208 (704,126)
query : 23 - 936 (914/936)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.976
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000648591
(
GU361469
)
genome : 161,771,084 - 163,092,527 (1,321,444)
query : 20 - 1,559 (1,540/1,559)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.988
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000648558
(
GU345838
)
genome : 161,771,084 - 162,864,522 (1,093,439)
query : 9 - 1,340 (1,332/1,340)
10 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.994
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000648557
(
GU345837
)
genome : 161,771,084 - 162,683,799 (912,716)
query : 23 - 1,298 (1,276/1,298)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.983
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000648573
(
GU357502
)
genome : 161,771,084 - 162,475,208 (704,125)
query : 23 - 873 (851/873)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.975
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000648593
(
GU361471
)
genome : 161,771,084 - 161,993,666 (222,583)
query : 23 - 634 (612/634)
5 exons
identity = 0.967
3'(1.000;1.000;1.000;1.000;0.826)5'
coverage = 0.965
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000722524
(
KC357595
)
genome : 161,771,114 - 163,092,527 (1,321,414)
query : 20 - 1,627 (1,608/1,627)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.988
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000722523
(
KC357594
)
genome : 161,771,114 - 161,813,390 (42,277)
query : 23 - 454 (432/454)
4 exons
identity = 0.979
3'(1.000;1.000;1.000;0.910)5'
coverage = 0.952
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000078658
(
AF381282
)
genome : 161,771,131 - 162,864,507 (1,093,377)
query : 6 - 1,157 (1,152/1,157)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000078660
(
AF381284
)
genome : 161,771,131 - 162,864,507 (1,093,377)
query : 6 - 1,158 (1,153/1,158)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000131098 (
ENST00000338468
)
genome : 161,771,131 - 162,864,507 (1,093,377)
query : 6 - 1,276 (1,271/1,276)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.996
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000348174 (
ENST00000366894
)
genome : 161,771,131 - 162,864,507 (1,093,377)
query : 6 - 1,157 (1,152/1,157)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.996
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000395424
(
EF375726
)
genome : 161,771,131 - 162,864,507 (1,093,377)
query : 6 - 1,398 (1,393/1,398)
11 exons
identity = 0.997
3'(1.000;1.000;0.988;1.000;0.984)5'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000078659
(
AF381283
)
genome : 161,771,131 - 162,683,799 (912,669)
query : 6 - 904 (899/904)
7 exons
identity = 0.999
3'(1.000;1.000)5'
coverage = 0.994
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000583668 (
ENST00000479615
)
genome : 161,771,131 - 162,683,799 (912,669)
query : 6 - 904 (899/904)
7 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.994
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000078661
(
AF381286
)
genome : 161,771,131 - 161,990,450 (219,320)
query : 6 - 534 (529/534)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.991
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000039350
(
BC022014
)
genome : 161,966,144 - 163,148,797 (1,182,654)
query : 2 - 1,564 (1,563/1,575)
11 exons
identity = 0.999
3'(1.000;1.000;1.000)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0023029
HIT000348172 (
ENST00000366892
)
genome : 161,966,144 - 163,148,796 (1,182,653)
query : 1 - 1,505 (1,505/1,505)
10 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023029)
HIX0033160
HIT000089892
(
BC019245
)
genome : 161,984,676 - 161,986,397 (1,722)
query : 3 - 1,724 (1,722/1,751)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033160)
HIX0006349
HIT000551965 (
ENST00000454031
)
genome : 160,874,460 - 160,932,039 (57,580)
query : 1 - 2,368 (2,368/2,368)
17 exons
identity = 0.992
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.978;0.963;1.000;0.984;1.000;0.963;
1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006349)
HIX0006349
HIT000657724 (
NR_028093
)
genome : 160,887,587 - 160,932,156 (44,570)
query : 1 - 1,968 (1,968/1,968)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006349)
HIX0006349
HIT000218515
(
U19518
)
genome : 160,887,841 - 160,932,156 (44,316)
query : 1 - 1,712 (1,712/1,712)
10 exons
identity = 0.997
3'(1.000;0.988;0.989;1.000;0.995;1.000;1.000;
1.000;1.000;0.994)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006349)
HIX0006349
HIT000533691 (
ENST00000435757
)
genome : 160,887,841 - 160,932,156 (44,316)
query : 1 - 1,714 (1,714/1,714)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006349)
HIX0006349
HIT000218514
(
U19517
)
genome : 160,888,216 - 160,932,156 (43,941)
query : 1 - 2,040 (2,040/2,041)
10 exons
identity = 0.997
3'(0.996;0.994;0.989;1.000;0.995;1.000;1.000;
1.000;1.000;0.994)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006349)
HIX0006349
HIT000129551 (
ENST00000335388
)
genome : 160,888,216 - 160,932,156 (43,941)
query : 1 - 2,041 (2,041/2,041)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006349)
HIX0006349
HIT000657723 (
NR_028092
)
genome : 160,888,216 - 160,932,156 (43,941)
query : 1 - 2,041 (2,041/2,041)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006349)
HIX0217167
HIT000197346 (
NM_000301
)
genome : 161,123,225 - 161,175,086 (51,862)
query : 1 - 3,538 (3,538/3,538)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217167)
HIX0217167
HIT000117891 (
ENST00000308192
)
genome : 161,123,274 - 161,174,338 (51,065)
query : 1 - 2,741 (2,741/2,741)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217167)
HIX0217167
HIT000431832
(
AK312966
)
genome : 161,123,274 - 161,174,093 (50,820)
query : 1 - 2,496 (2,496/2,496)
19 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.989;1.000;
1.000;1.000;1.000;1.000;0.994)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217167)
HIX0217167
HIT000492962
(
AK298338
)
genome : 161,123,276 - 161,174,317 (51,042)
query : 1 - 2,125 (2,125/2,125)
15 exons
identity = 0.994
5'(1.000;0.993;0.991;0.862;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217167)
HIX0217167
HIT000321118
(
X05199
)
genome : 161,123,283 - 161,174,338 (51,056)
query : 1 - 2,732 (2,732/2,732)
19 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
0.994;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217167)
HIX0217167
HIT000196309
(
M74220
)
genome : 161,123,288 - 161,174,108 (50,821)
query : 1 - 2,497 (2,497/2,497)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217167)
HIX0217167
HIT000260056
(
BC060513
)
genome : 161,123,300 - 161,174,316 (51,017)
query : 2 - 2,694 (2,693/2,730)
19 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;0.997)3'
coverage = 0.986
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217167)
HIX0217167
HIT000191400
(
K02922
)
genome : 161,139,412 - 161,174,317 (34,906)
query : 1 - 1,784 (1,784/1,784)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217167)
HIX0217167
HIT000306332
(
CR749293
)
genome : 161,155,645 - 161,174,318 (18,674)
query : 1 - 4,616 (4,616/4,634)
6 exons
identity = 0.994
5'(0.958;0.996;1.000;1.000;1.000;0.992)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217167)
HIX0006350
HIT000435562
(
BC146770
)
genome : 161,412,759 - 161,538,417 (125,659)
query : 1 - 5,397 (5,397/5,431)
26 exons
identity = 1.000
5'(1.000;1.000;0.999;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006350)
HIX0006350
HIT000348199 (
ENST00000366919
)
genome : 161,412,759 - 161,538,417 (125,659)
query : 1 - 5,397 (5,397/5,397)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006350)
HIX0006350
HIT000042350
(
D86968
)
genome : 161,412,759 - 161,538,416 (125,658)
query : 1 - 5,396 (5,396/5,396)
26 exons
identity = 1.000
5'(1.000;1.000;0.999;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006350)
HIX0006350
HIT000475636 (
ENST00000392142
)
genome : 161,412,816 - 161,538,417 (125,602)
query : 1 - 5,490 (5,490/5,490)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006350)
HIX0006350
HIT000202570 (
NM_005922
)
genome : 161,412,822 - 161,538,417 (125,596)
query : 1 - 5,484 (5,484/5,501)
27 exons
identity = 1.000
5'(1.000;1.000;0.999;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006350)
HIX0006350
HIT000203300 (
NM_006724
)
genome : 161,412,822 - 161,538,417 (125,596)
query : 1 - 5,334 (5,334/5,351)
26 exons
identity = 1.000
5'(1.000;1.000;0.999;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006350)
HIX0006350
HIT000061693
(
AF002715
)
genome : 161,412,822 - 161,538,381 (125,560)
query : 1 - 5,445 (5,445/5,445)
27 exons
identity = 0.999
5'(1.000;1.000;0.999;1.000;1.000;1.000;0.991;
0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.980;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006350)
HIX0006350
HIT000307680 (
ENST00000348824
)
genome : 161,412,846 - 161,538,414 (125,569)
query : 1 - 5,295 (5,295/5,295)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006350)
HIX0006350
HIT000348200 (
ENST00000366920
)
genome : 161,412,846 - 161,538,414 (125,569)
query : 1 - 5,445 (5,445/5,445)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006350)
HIX0006350
HIT000500308
(
BC136276
)
genome : 161,412,875 - 161,538,340 (125,466)
query : 1 - 5,354 (5,354/5,354)
27 exons
identity = 0.999
5'(0.988;1.000;0.999;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.980;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006350)
HIX0006350
HIT000502178
(
BC143735
)
genome : 161,412,875 - 161,538,339 (125,465)
query : 1 - 5,350 (5,350/5,350)
27 exons
identity = 0.999
5'(1.000;1.000;0.999;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.980;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006350)
HIX0006350
HIT000502186
(
BC143743
)
genome : 161,412,876 - 161,538,340 (125,465)
query : 1 - 5,441 (5,441/5,441)
28 exons
identity = 0.999
5'(1.000;1.000;0.999;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.980;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006350)
HIX0006350
HIT000502193
(
BC143750
)
genome : 161,412,876 - 161,538,340 (125,465)
query : 1 - 5,448 (5,448/5,448)
28 exons
identity = 0.999
5'(1.000;1.000;0.999;1.000;1.000;1.000;1.000;
1.000;0.990;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006350)
HIX0006350
HIT000594445 (
ENST00000490904
)
genome : 161,412,876 - 161,538,340 (125,465)
query : 1 - 5,451 (5,451/5,451)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006350)
HIX0006350
HIT000643086 (
ENST00000544041
)
genome : 161,412,876 - 161,538,340 (125,465)
query : 1 - 5,444 (5,444/5,444)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006350)
HIX0006350
HIT000426732
(
AK307866
)
genome : 161,412,890 - 161,530,856 (117,967)
query : 1 - 4,365 (4,365/4,365)
23 exons
identity = 0.998
5'(1.000;1.000;0.999;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.973;0.990;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006350)
HIX0184514
pHIT000078696 ( pHIT000078696 )
genome : 160,719,617 - 160,750,534 (30,918)
query : 1 - 309 (309/309)
3 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0184514)
CAGE tag :
H09BA22H1507,H09BA31B0902,H09BA70H1606
H09BA82L0610,H09BA82M1603
HIX0057735
pHIT000012426 ( pHIT000012426 )
genome : 161,065,922 - 161,100,465 (34,544)
query : 1 - 1,191 (1,191/1,191)
10 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057735)
CAGE tag :
H08BA47P0506,H22BA34M0407,H22BA47D1803
H22BB72C0607,H27BC98E1002
HIX0057735
eHIT000020221 ( ESTsASS_6_871 )
genome : 160,961,122 - 160,969,544 (8,423)
query : 1 - 568 (568/568)
6 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057735)
ESTs used for assembly :
BF970104,BX281735,CB161915
AL353625.5
160500001-160580269 F +
NCBI
AL645733.1
160580270-160617543 F +
NCBI
AL162582.30
160617544-160701329 F +
NCBI
AL355506.23
160701330-160782248 F -
NCBI
AL591069.5
160782249-160934980 F +
NCBI
AL807253.2
160934981-160939315 F +
NCBI
AL596089.19
160939316-161071066 F +
NCBI
AL109933.25
161071067-161234665 F +
NCBI
AL391663.13
161234666-161254911 F +
NCBI
AL391361.18
161254912-161353973 F +
NCBI
AL139393.13
161353974-161439497 F +
NCBI
AL596452.2
161439498-161507179 F +
NCBI
AL591045.5
161507180-161532532 F +
NCBI
AL109942.13
161532533-161706749 F +
NCBI
AL132982.12
161706750-161798446 F +
NCBI
AL445215.7
161798447-161853080 F +
NCBI
AL138716.6
161853081-161908299 F +
NCBI
AL035697.19
161908300-162042979 F +
NCBI
AL078583.15
162042980-162100000 F -
NCBI