bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0025076
HIT000197108 (
NM_000056
)
(2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; EC=1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Precursor;)
genome : 80,816,344 - 81,055,987 (239,644)
query : 1 - 1,550 (1,550/1,572)
11 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.999
EC number :
EC 1.2.4.4
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, pero 6, E.R. 5.5, plas 5, E.R._mito 4.5,
mito 2.5, cysk_plas 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
HIX0025076
HIT000318919 (
NM_183050
)
(2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; EC=1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Precursor;)
genome : 80,816,344 - 81,055,987 (239,644)
query : 1 - 3,712 (3,712/3,712)
10 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.4
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, pero 6, E.R. 5.5, plas 5, E.R._mito 4.5,
mito 2.5, cysk_plas 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
HIX0025076
HIT000498977
(
AK304353
)
(2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; EC=1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Precursor;)
genome : 80,816,356 - 81,053,548 (237,193)
query : 1 - 1,055 (1,055/1,055)
10 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.4
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR005475 : Transketolase-like, pyrimidine-binding domain
IPR005476 : Transketolase, C-terminal
IPR009014 : Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
IPR029061 : Thiamin diphosphate-binding fold
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 22, cyto 4, mito 4, cyto_mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
HIX0025076
HIT000220180
(
U50708
)
Representative transcript
(2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; EC=1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Precursor;)
genome : 80,816,364 - 81,055,987 (239,624)
query : 1 - 1,529 (1,529/1,551)
11 exons
identity = 0.997
5'(1.000;0.986)3'
coverage = 0.999
EC number :
EC 1.2.4.4
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR005475 : Transketolase-like, pyrimidine-binding domain
IPR005476 : Transketolase, C-terminal
IPR009014 : Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
IPR029061 : Thiamin diphosphate-binding fold
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, pero 6, E.R. 5.5, plas 5, E.R._mito 4.5,
mito 2.5, cysk_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AB035084
Mus
sp. (Mouse) : AK156264
Bos
sp. (Cow) : BC118380
Pongo
sp. (Orangutan) : CR860263
Equus
sp. (Horse) : ENSECAT00000010232
Pan
sp. (Chimpanzee) : ENSPTRT00000033979
Tetraodon
sp. (Tetraodon) : GSTENT00013228001
Rattus
sp. (Rat) : M94040
Takifugu
sp. (Fugu) : SINFRUT00000158426
Macaca
sp. (Macaque) : XM_001111198
Monodelphis
sp. (Opossum) : XM_001375199
Canis
sp. (Dog) : XM_532213
HIX0025076
HIT000122407 (
ENST00000320393
)
(2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; EC=1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Precursor;)
genome : 80,816,364 - 81,055,987 (239,624)
query : 1 - 3,692 (3,692/3,692)
10 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.4
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, pero 6, E.R. 5.5, plas 5, E.R._mito 4.5,
mito 2.5, cysk_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
HIX0025076
HIT000310475 (
ENST00000356489
)
(2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; EC=1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Precursor;)
genome : 80,816,364 - 81,055,971 (239,608)
query : 1 - 1,514 (1,514/1,514)
11 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.4
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, pero 6, E.R. 5.5, plas 5, E.R._mito 4.5,
mito 2.5, cysk_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
HIX0025076
HIT000051160
(
BC034481
)
(2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; EC=1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Precursor;)
genome : 80,816,383 - 81,055,987 (239,605)
query : 1 - 3,762 (3,762/3,781)
11 exons
identity = 0.990
5'(0.990)3'
coverage = 0.999
EC number :
EC 1.2.4.4
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR005475 : Transketolase-like, pyrimidine-binding domain
IPR029061 : Thiamin diphosphate-binding fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, pero 5.5, mito_pero 5.33333, plas 4, mito 4,
E.R._mito 3.83333, E.R. 2.5, cyto_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
HIX0025076
HIT000644574 (
ENST00000545529
)
(2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; EC=1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Precursor;)
genome : 80,816,383 - 81,055,987 (239,605)
query : 1 - 3,767 (3,767/3,767)
11 exons
identity = 0.998
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.4
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, pero 5.5, mito_pero 5.33333, plas 4, mito 4,
E.R._mito 3.83333, E.R. 2.5, cyto_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
HIX0025076
HIT000500158
(
AK316545
)
(2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; EC=1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Precursor;)
genome : 80,816,388 - 81,053,634 (237,247)
query : 1 - 1,289 (1,289/1,289)
10 exons
identity = 0.980
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.4
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR005475 : Transketolase-like, pyrimidine-binding domain
IPR005476 : Transketolase, C-terminal
IPR009014 : Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
IPR029061 : Thiamin diphosphate-binding fold
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 15, mito 10, mito_pero 6.5, cyto 2, nucl 1,
E.R. 1, pero 1, lyso 1, golg 1, E.R._golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
HIX0025076
HIT000422774
(
AK289977
)
(2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; EC=1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Precursor;)
genome : 80,816,398 - 81,053,775 (237,378)
query : 1 - 1,443 (1,443/1,443)
10 exons
identity = 0.997
5'(0.990)3'
coverage = 1.000
EC number :
EC 1.2.4.4
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR005475 : Transketolase-like, pyrimidine-binding domain
IPR005476 : Transketolase, C-terminal
IPR009014 : Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
IPR029061 : Thiamin diphosphate-binding fold
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, pero 6, E.R. 5.5, plas 5, E.R._mito 4.5,
mito 2.5, cysk_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
HIX0025076
HIT000052330
(
BC040139
)
(2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; EC=1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Precursor;)
genome : 80,816,406 - 81,055,987 (239,582)
query : 1 - 3,645 (3,645/3,661)
10 exons
identity = 0.993
5'(0.991)3'
coverage = 1.000
EC number :
EC 1.2.4.4
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR005475 : Transketolase-like, pyrimidine-binding domain
IPR005476 : Transketolase, C-terminal
IPR009014 : Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
IPR029061 : Thiamin diphosphate-binding fold
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, pero 6, E.R. 5.5, plas 5, E.R._mito 4.5,
mito 2.5, cysk_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
HIX0025076
HIT000195795
(
M55575
)
(2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; EC=1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Precursor;)
genome : 80,816,407 - 81,053,677 (237,271)
query : 1 - 1,339 (1,339/1,339)
10 exons
identity = 0.999
5'(0.997)3'
coverage = 1.000
EC number :
EC 1.2.4.4
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR005475 : Transketolase-like, pyrimidine-binding domain
IPR005476 : Transketolase, C-terminal
IPR009014 : Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
IPR029061 : Thiamin diphosphate-binding fold
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, pero 6, E.R. 5.5, plas 5, E.R._mito 4.5,
mito 2.5, cysk_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
HIX0025076
HIT000266800
(
BT020063
)
(2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; EC=1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Precursor;)
genome : 80,816,411 - 81,053,519 (237,109)
query : 1 - 1,177 (1,177/1,179)
10 exons
identity = 1.000
5'(1.000)3'
coverage = 0.998
EC number :
EC 1.2.4.4
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR005475 : Transketolase-like, pyrimidine-binding domain
IPR005476 : Transketolase, C-terminal
IPR009014 : Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
IPR029061 : Thiamin diphosphate-binding fold
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, pero 6, E.R. 5.5, plas 5, E.R._mito 4.5,
mito 2.5, cysk_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
HIX0025076
HIT000321779
(
X52446
)
(2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; EC=1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Precursor;)
genome : 80,816,480 - 81,055,971 (239,492)
query : 13 - 1,409 (1,397/1,412)
11 exons
identity = 0.996
5'(1.000;0.986)3'
coverage = 0.989
EC number :
EC 1.2.4.4
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR005475 : Transketolase-like, pyrimidine-binding domain
IPR005476 : Transketolase, C-terminal
IPR009014 : Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
IPR029061 : Thiamin diphosphate-binding fold
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, plas 10, mito_pero 9.5, cyto 2, extr 1,
E.R. 1, cyto_nucl 1, lyso 1, golg 1, E.R._golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
HIX0025076
HIT000429704
(
AK310838
)
(2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; EC=1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Precursor;)
genome : 80,844,095 - 81,053,596 (209,502)
query : 1 - 1,096 (1,096/1,096)
8 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.4
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR005475 : Transketolase-like, pyrimidine-binding domain
IPR005476 : Transketolase, C-terminal
IPR009014 : Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
IPR029061 : Thiamin diphosphate-binding fold
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19, cyto 4, mito 3.5, E.R._mito 2.5,
cyto_golg 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
HIX0025076
HIT000594855 (
ENST00000491328
)
(2-oxoisovalerate dehydrogenase subunit beta, mitochondrial; EC=1.2.4.4; Branched-chain alpha-keto acid dehydrogenase E1 component beta chain; BCKDE1B; BCKDH E1-beta; Precursor;)
genome : 81,053,288 - 81,055,971 (2,684)
query : 1 - 522 (522/522)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.4
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 11, cyto_nucl 10, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
HIX0025076
HIT000220194
(
U51016
)
(Hypothetical protein.)
genome : 81,055,692 - 81,055,987 (296)
query : 1 - 295 (295/317)
1 exon
identity = 0.986
5'(0.986)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, mito 9, nucl 4.5,
E.R._mito 4.5, mito_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025076)
HIX0165265
HIT000504816 (
ENST00000404330
)
(Ribosomal protein L22/L17 family protein.)
genome : 81,083,732 - 81,084,286 (555)
query : 1 - 555 (555/555)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 9, cyto 6, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165265)
HIX0164955
HIT000550336 (
ENST00000452402
)
(Hypothetical short protein.)
genome : 81,153,061 - 81,175,644 (22,584)
query : 1 - 682 (682/682)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164955)
HIX0164955
HIT000524982 (
ENST00000427048
)
(Hypothetical short protein.)
genome : 81,153,173 - 81,175,572 (22,400)
query : 1 - 732 (732/732)
5 exons
identity = 0.989
5'(1.000;0.945;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164955)
HIX0164955
HIT000541155 (
ENST00000443221
)
(Hypothetical short protein.)
genome : 81,153,173 - 81,172,924 (19,752)
query : 1 - 758 (758/758)
4 exons
identity = 0.989
5'(1.000;0.945;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164955)
HIX0025049
HIT000045995
(
AK126122
)
Representative transcript
(Hypothetical protein.)
genome : 81,176,675 - 81,178,797 (2,123)
query : 1 - 2,123 (2,123/2,123)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cysk 10, cyto_nucl 8.5, nucl 6.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025049)
HIX0025049
HIT000682212 (
ENST00000569267
)
(Hypothetical protein.)
genome : 81,176,675 - 81,178,797 (2,123)
query : 1 - 2,123 (2,123/2,123)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cysk 10, cyto_nucl 8.5, nucl 6.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025049)
HIX0033286
HIT000055237
(
BX640688
)
Representative transcript
(Conserved hypothetical protein.)
genome : 81,178,598 - 81,178,798 (201)
query : 1 - 201 (201/271)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, extr 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033286)
HIX0165410
HIT000505822 (
ENST00000407020
)
(Conserved hypothetical protein.)
genome : 81,179,788 - 81,180,145 (358)
query : 1 - 358 (358/358)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8.5, cyto_nucl 8.16667, nucl 6.5,
cyto_pero 5.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165410)
HIX0165010
HIT000124794 (
ENST00000326971
)
(Conserved hypothetical protein.)
genome : 81,208,913 - 81,209,109 (197)
query : 1 - 197 (197/197)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 10, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165010)
HIX0165230
HIT000504624 (
ENST00000403828
)
(Citrate synthase-like family protein.)
genome : 81,265,558 - 81,266,906 (1,349)
query : 1 - 1,349 (1,349/1,349)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 11, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165230)
HIX0207477
HIT000462690_11
(
DQ596159
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,690,952 - 81,690,981 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207477)
HIX0165718
HIT000533792 (
ENST00000435858
)
(Hypothetical short protein.)
genome : 82,236,819 - 82,244,630 (7,812)
query : 1 - 784 (784/784)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.1667, cyto 14, cyto_plas 9, nucl 8,
extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165718)
HIX0165718
HIT000683474 (
ENST00000570612
)
(Hypothetical short protein.)
genome : 82,237,084 - 82,244,632 (7,549)
query : 1 - 319 (319/319)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165718)
HIX0032778
HIT000070660
(
AF130064
)
Representative transcript
(Conserved hypothetical protein.)
genome : 82,261,403 - 82,263,809 (2,407)
query : 2 - 2,408 (2,407/2,408)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 21, cyto_nucl 12, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032778)
HIX0032778
HIT000709576 (
ENST00000597800
)
(Conserved hypothetical protein.)
genome : 82,262,307 - 82,262,537 (231)
query : 1 - 231 (231/231)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 21, cyto_nucl 12, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032778)
HIX0025140
HIT000046420
(
AK126547
)
Representative transcript
(Conserved hypothetical protein.)
genome : 82,323,527 - 82,332,548 (9,022)
query : 1 - 2,547 (2,547/2,547)
3 exons
identity = 0.996
5'(0.988;0.986;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 13, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025140)
HIX0025140
HIT000474561 (
ENST00000391034
)
(Non-protein coding transcript.)
genome : 82,331,917 - 82,332,036 (120)
query : 1 - 120 (120/120)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025140)
HIX0165878
HIT000555050 (
ENST00000457116
)
(Hypothetical short protein.)
genome : 82,434,439 - 82,446,070 (11,632)
query : 1 - 471 (471/471)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165878)
HIX0216784
HIT000247879
(
AJ420591
)
(Hypothetical protein.)
genome : 82,455,451 - 82,457,163 (1,713)
query : 10 - 1,722 (1,713/1,766)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5, nucl 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216784)
HIX0216784
HIT000247871
(
AJ420583
)
Representative transcript
(Conserved hypothetical protein.)
genome : 82,455,447 - 82,458,089 (2,643)
query : 10 - 2,652 (2,643/2,682)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5, nucl 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216784)
HIX0216784
HIT000021559
(
AK096704
)
(Conserved hypothetical protein.)
genome : 82,455,452 - 82,457,533 (2,082)
query : 1 - 2,082 (2,082/2,082)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5, nucl 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216784)
HIX0006030
HIT000012671
(
AK056057
)
(Protein FAM46A; HBV X-transactivated gene 11 protein; HBV XAg-transactivated protein 11;)
genome : 82,459,061 - 82,462,425 (3,365)
query : 1 - 2,067 (2,067/2,067)
3 exons
identity = 0.991
3'(0.998;0.974;0.997)5'
coverage = 1.000
InterPro :
IPR012937 : Domain of unknown function DUF1693
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 9, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006030)
HIX0006030
HIT000029832
(
BC000683
)
(Protein FAM46A; HBV X-transactivated gene 11 protein; HBV XAg-transactivated protein 11;)
genome : 82,459,359 - 82,462,380 (3,022)
query : 1 - 1,707 (1,707/1,736)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR012937 : Domain of unknown function DUF1693
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 10, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006030)
HIX0006030
HIT000033167
(
BC007351
)
(Protein FAM46A; HBV X-transactivated gene 11 protein; HBV XAg-transactivated protein 11;)
genome : 82,459,359 - 82,462,412 (3,054)
query : 1 - 1,699 (1,699/1,724)
3 exons
identity = 0.991
3'(1.000;0.975;1.000)5'
coverage = 1.000
InterPro :
IPR012937 : Domain of unknown function DUF1693
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 6.5, cysk 4, extr 2,
mito 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006030)
HIX0006030
HIT000247880
(
AJ420592
)
(Protein FAM46A; HBV X-transactivated gene 11 protein; HBV XAg-transactivated protein 11;)
genome : 82,459,359 - 82,462,378 (3,020)
query : 9 - 1,535 (1,527/1,557)
3 exons
identity = 0.990
3'(1.000;0.975;1.000)5'
coverage = 1.000
InterPro :
IPR012937 : Domain of unknown function DUF1693
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 6.5, cysk 4, extr 2,
mito 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006030)
HIX0006030
HIT000002519
(
AK000044
)
(Protein FAM46A; HBV X-transactivated gene 11 protein; HBV XAg-transactivated protein 11;)
genome : 82,459,359 - 82,462,396 (3,038)
query : 1 - 1,683 (1,683/1,702)
3 exons
identity = 0.989
3'(0.998;0.974;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 6.5, cysk 4, extr 2,
mito 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006030)
HIX0006030
HIT000424906
(
AK292109
)
Representative transcript
(Protein FAM46A; HBV X-transactivated gene 11 protein; HBV XAg-transactivated protein 11;)
genome : 82,459,360 - 82,462,428 (3,069)
query : 2 - 1,700 (1,699/1,700)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR012937 : Domain of unknown function DUF1693
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12.5, nucl 6, cysk 4, extr 2,
mito 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006030)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720583
Mus
sp. (Mouse) : AK135132
Danio
sp. (Zebrafish) : BC151974
Oryzias
sp. (Medaka) : ENSORLT00000002333
Pongo
sp. (Orangutan) : ENSPPYT00000019547
Tetraodon
sp. (Tetraodon) : GSTENT00013223001
Takifugu
sp. (Fugu) : SINFRUT00000146990
Takifugu
sp. (Fugu) : SINFRUT00000158432
Rattus
sp. (Rat) : XM_001063356
Macaca
sp. (Macaque) : XM_001082268
Bos
sp. (Cow) : XM_001249783
Monodelphis
sp. (Opossum) : XM_001375356
Equus
sp. (Horse) : XM_001503661
Canis
sp. (Dog) : XM_539017
HIX0006030
HIT000332232
(
AY740520
)
(Protein FAM46A; HBV X-transactivated gene 11 protein; HBV XAg-transactivated protein 11;)
genome : 82,459,412 - 82,461,858 (2,447)
query : 1 - 1,344 (1,344/1,344)
2 exons
identity = 0.987
3'(0.997;0.972)5'
coverage = 1.000
InterPro :
IPR012937 : Domain of unknown function DUF1693
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 6.5, cysk 4, extr 2,
mito 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006030)
HIX0006030
HIT000558485
(
FJ211061
)
(Protein FAM46A; HBV X-transactivated gene 11 protein; HBV XAg-transactivated protein 11;)
genome : 82,459,412 - 82,461,858 (2,447)
query : 1 - 1,314 (1,314/1,314)
2 exons
identity = 0.986
3'(0.997;0.971)5'
coverage = 1.000
InterPro :
IPR012937 : Domain of unknown function DUF1693
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13, nucl 6, cysk 4, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006030)
HIX0006030
HIT000521401 (
ENST00000423467
)
(Protein FAM46A.)
genome : 82,459,587 - 82,461,470 (1,884)
query : 1 - 356 (356/356)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 14, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006030)
HIX0122982
HIT000470172 (
ENST00000384159
)
(Non-protein coding transcript.)
genome : 82,473,741 - 82,473,873 (133)
query : 1 - 133 (133/133)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0122982)
HIX0165139
HIT000503968 (
ENST00000402075
)
(Ribosomal protein L10e/L16 domain containing protein.)
genome : 82,473,928 - 82,474,220 (293)
query : 1 - 293 (293/293)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7.5, mito 5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165139)
HIX0032897
HIT000095118
(
BC038196
)
Representative transcript
(Hypothetical short protein.)
genome : 82,523,004 - 82,523,909 (906)
query : 1 - 554 (554/588)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 7, cyto_mito 7, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032897)
HIX0032897
HIT000095285
(
BC038576
)
(Hypothetical short protein.)
genome : 82,523,004 - 82,523,909 (906)
query : 1 - 554 (554/588)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 7, cyto_mito 7, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032897)
HIX0032897
HIT000539883 (
ENST00000441949
)
(Hypothetical short protein.)
genome : 82,523,003 - 82,523,874 (872)
query : 1 - 520 (520/520)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 7, cyto_mito 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032897)
HIX0165559
HIT000516501 (
ENST00000418567
)
(Hypothetical protein.)
genome : 82,554,902 - 82,643,197 (88,296)
query : 1 - 822 (822/822)
3 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11, nucl 9.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165559)
HIX0217161
HIT000510240 (
ENST00000412306
)
(Domain of unknown function DUF1693 domain containing protein.)
genome : 82,201,156 - 82,461,529 (260,374)
query : 1 - 546 (546/546)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6, extr 4, cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217161)
HIX0217161
HIT000206515 (
NM_017633
)
(Domain of unknown function DUF1693 domain containing protein.)
genome : 82,455,447 - 82,462,428 (6,982)
query : 1 - 5,612 (5,612/5,617)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12.5, nucl 6, cysk 4, extr 2,
mito 2, cysk_plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217161)
HIX0217161
HIT000351036 (
ENST00000369756
)
(Domain of unknown function DUF1693 domain containing protein.)
genome : 82,455,447 - 82,462,491 (7,045)
query : 1 - 5,537 (5,537/5,537)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 13.5, mito 9, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217161)
HIX0217161
HIT000122323 (
ENST00000320172
)
(Domain of unknown function DUF1693 domain containing protein.)
genome : 82,455,447 - 82,462,425 (6,979)
query : 1 - 5,609 (5,609/5,609)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12.5, nucl 6, cysk 4, extr 2,
mito 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217161)
HIX0217161
HIT000351034 (
ENST00000369754
)
(Domain of unknown function DUF1693 domain containing protein.)
genome : 82,455,447 - 82,462,425 (6,979)
query : 1 - 5,664 (5,664/5,664)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 10, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217161)
HIX0217161
HIT000078211
(
AF350451
)
Representative transcript
(Protein FAM46A; HBV X-transactivated gene 11 protein; HBV XAg-transactivated protein 11;)
genome : 82,455,448 - 82,462,407 (6,960)
query : 1 - 5,571 (5,571/5,571)
3 exons
identity = 0.996
3'(1.000;0.969;0.981)5'
coverage = 1.000
InterPro :
IPR012937 : Domain of unknown function DUF1693
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13, nucl 6, cysk 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217161)
HIX0217161
HIT000057523
(
BX648876
)
(Protein FAM46A.)
genome : 82,456,012 - 82,462,398 (6,387)
query : 3 - 4,700 (4,698/4,719)
3 exons
identity = 0.998
3'(0.997;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR012937 : Domain of unknown function DUF1693
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.5, nucl 9.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217161)
AL049696.9
81000001-81058807 F -
NCBI
AL359715.12
81058808-81181086 F +
NCBI
AL596028.6
81181087-81235306 F +
NCBI
AL590824.6
81235307-81288231 F +
NCBI
AL590035.10
81288232-81417628 F +
NCBI
AL357892.13
81417629-81607504 F +
NCBI
AL121930.13
81607505-81742838 F +
NCBI
AL137123.5
81742839-81813771 F +
NCBI
AL365446.8
81813772-81835277 F +
NCBI
AL731894.5
81835278-81876340 F +
NCBI
AL445303.6
81876341-81905053 F +
NCBI
AL355352.16
81905054-82074700 F +
NCBI
AL390057.12
82074701-82175178 F +
NCBI
AL122017.17
82175179-82254331 F +
NCBI
AL359693.11
82254332-82404027 F +
NCBI
AL078599.19
82404028-82532922 F +
NCBI
AL355294.14
82532923-82600000 F +
NCBI