bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0006488
HIT000207186_03 (
NM_018374
)
(Transmembrane protein 106B;)
genome : 12,250,848 - 12,276,890 (26,043)
query : 1 - 6,514 (6,514/6,514)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006488)
HIX0006488
HIT000430517
(
AK311651
)
(Transmembrane protein 106B.)
genome : 12,250,896 - 12,270,565 (19,670)
query : 1 - 1,492 (1,492/1,492)
7 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;0.993;1.000)3'
coverage = 1.000
InterPro :
IPR009790 : Protein of unknown function DUF1356, TMEM106
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 13, extr 7, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006488)
HIX0006488
HIT000518767 (
ENST00000420833
)
(Transmembrane protein 106B.)
genome : 12,250,896 - 12,270,565 (19,670)
query : 1 - 1,492 (1,492/1,492)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 13, extr 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006488)
HIX0006488
HIT000542377 (
ENST00000444443
)
(Transmembrane protein 106B.)
genome : 12,250,922 - 12,263,900 (12,979)
query : 1 - 584 (584/584)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 5.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006488)
HIX0006488
HIT000042023_03
(
BC033901
)
Representative transcript
(Transmembrane protein 106B;)
genome : 12,250,926 - 12,276,886 (25,961)
query : 1 - 6,441 (6,441/6,456)
9 exons
identity = 0.998
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
InterPro :
IPR009790 : Protein of unknown function DUF1356, TMEM106
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006488)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172352
Gallus
sp. (Chicken) : AJ851510
Mus
sp. (Mouse) : AK148477
Danio
sp. (Zebrafish) : BC053198
Rattus
sp. (Rat) : BC079127
Bos
sp. (Cow) : BC102965
Tetraodon
sp. (Tetraodon) : CR689759
Oryzias
sp. (Medaka) : ENSORLT00000020783
Pongo
sp. (Orangutan) : ENSPPYT00000020713
Danio
sp. (Zebrafish) : NM_001045052
Takifugu
sp. (Fugu) : SINFRUT00000141670
Equus
sp. (Horse) : XM_001495693
Pan
sp. (Chimpanzee) : XM_518973
Canis
sp. (Dog) : XM_539439
HIX0006488
HIT000551620 (
ENST00000453686
)
(Transmembrane protein 106B.)
genome : 12,250,935 - 12,255,333 (4,399)
query : 1 - 562 (562/562)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 13, extr 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006488)
HIX0006488
HIT000540041 (
ENST00000442107
)
(Non-protein coding transcript.)
genome : 12,250,949 - 12,254,511 (3,563)
query : 1 - 496 (496/496)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006488)
HIX0006488
HIT000004308
(
AK001834
)
(Transmembrane protein 106B.)
genome : 12,271,074 - 12,273,303 (2,230)
query : 1 - 2,233 (2,233/2,233)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 8, cyto_nucl 8, mito 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006488)
HIX0006488
HIT000015672
(
AK090805
)
(Conserved hypothetical protein.)
genome : 12,274,251 - 12,276,889 (2,639)
query : 1 - 2,642 (2,642/2,642)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 11.5, extr_plas 8, plas 3.5, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006488)
HIX0006488
HIT000327114
(
Z36806
)
(Hypothetical short protein.)
genome : 12,274,790 - 12,275,186 (397)
query : 1 - 400 (400/400)
1 exon
identity = 0.968
5'(0.968)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006488)
HIX0025403
HIT000046559
(
AK126686
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,279,310 - 12,282,992 (3,683)
query : 1 - 3,649 (3,649/3,649)
2 exons
identity = 0.998
5'(0.999;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 8, cyto_nucl 5.66667, cyto 5.5,
cyto_pero 4.83333, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025403)
HIX0217518
HIT000010890
(
AK027618
)
Representative transcript
(Epidermal growth factor-like domain containing protein.)
genome : 12,370,511 - 12,410,018 (39,508)
query : 11 - 3,167 (3,157/3,192)
18 exons
identity = 0.997
3'(0.984;1.000;1.000;1.000;0.990;1.000;1.000;
0.990;1.000;1.000;0.993;0.995;0.996;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.989
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR013032 : EGF-like, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217518)
HIX0217518
HIT000589325 (
ENST00000485526
)
(Epidermal growth factor-like domain containing protein.)
genome : 12,370,513 - 12,373,352 (2,840)
query : 1 - 573 (573/573)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217518)
HIX0217621
HIT000082558
(
AK075525
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,417,190 - 12,443,531 (26,342)
query : 1 - 1,463 (1,463/1,463)
9 exons
identity = 0.998
3'(0.994;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217621)
HIX0217621
HIT000124682 (
ENST00000326715
)
(Conserved hypothetical protein.)
genome : 12,417,190 - 12,443,350 (26,161)
query : 1 - 1,394 (1,394/1,394)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217621)
HIX0167659
HIT000518186 (
ENST00000420252
)
(Lupus La protein family protein.)
genome : 12,510,978 - 12,512,171 (1,194)
query : 1 - 1,194 (1,194/1,194)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, extr 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167659)
HIX0167660
HIT000519080 (
ENST00000421146
)
(Taste receptor type 2 family protein.)
genome : 12,530,721 - 12,531,630 (910)
query : 1 - 910 (910/910)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167660)
HIX0167745
HIT000516362 (
ENST00000418428
)
(Hypothetical short protein.)
genome : 12,536,055 - 12,581,536 (45,482)
query : 1 - 1,094 (1,094/1,094)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, cyto 5, cyto_nucl 4.33333,
cyto_pero 3.33333, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167745)
HIX0167745
HIT000541808 (
ENST00000443874
)
(Non-protein coding transcript.)
genome : 12,544,025 - 12,568,554 (24,530)
query : 1 - 260 (260/260)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167745)
HIX0167745
HIT000522387 (
ENST00000424453
)
(Hypothetical protein.)
genome : 12,544,050 - 12,580,761 (36,712)
query : 1 - 562 (562/562)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167745)
HIX0168709
HIT000551372 (
ENST00000453438
)
(Conserved hypothetical protein.)
genome : 12,545,633 - 12,547,104 (1,472)
query : 1 - 462 (462/462)
3 exons
identity = 0.991
3'(0.985;0.986;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168709)
HIX0034081
HIT000306063
(
CR627028
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,573,156 - 12,581,389 (8,234)
query : 1 - 6,997 (6,997/7,015)
2 exons
identity = 0.997
3'(1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034081)
HIX0217660
HIT000265612
(
BC075797
)
Representative transcript
(Villin/Gelsolin family protein.)
genome : 12,596,187 - 12,616,811 (20,625)
query : 1 - 6,892 (6,892/6,925)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007122 : Villin/Gelsolin
IPR007123 : Gelsolin-like domain
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 10, cyto 7, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217660)
HIX0207812
HIT000530974 (
ENST00000433040
)
(Hypothetical short protein.)
genome : 12,609,751 - 12,611,017 (1,267)
query : 1 - 911 (911/911)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207812)
HIX0217660
HIT000514952 (
ENST00000417018
)
(Villin/Gelsolin family protein.)
genome : 12,610,345 - 12,620,730 (10,386)
query : 1 - 549 (549/549)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 12, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217660)
HIX0217660
HIT000534788 (
ENST00000436854
)
(Villin/Gelsolin family protein.)
genome : 12,610,347 - 12,617,775 (7,429)
query : 1 - 570 (570/570)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 8, nucl 7.5, cyto 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217660)
HIX0022151
HIT000017388
(
AK092521
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,626,246 - 12,628,008 (1,763)
query : 1 - 1,763 (1,763/1,763)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 8.5, extr 6, mito 6, pero 3,
extr_plas 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022151)
HIX0006490
HIT000623002 (
ENST00000523729
)
(Villin/Gelsolin family protein.)
genome : 12,628,553 - 12,664,677 (36,125)
query : 1 - 585 (585/585)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11, nucl 8.5, cyto_pero 8.33333,
extr 5, mito 2.5, extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006490)
HIX0006490
HIT000618219 (
ENST00000518849
)
(Villin/Gelsolin family protein.)
genome : 12,629,054 - 12,662,509 (33,456)
query : 1 - 536 (536/536)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, extr 8, cyto_nucl 8, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006490)
HIX0006490
HIT000618570 (
ENST00000519209
)
(Villin/Gelsolin family protein.)
genome : 12,629,058 - 12,693,227 (64,170)
query : 1 - 2,660 (2,660/2,660)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15.5, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006490)
HIX0006490
HIT000211152 (
NM_033128
)
(Villin/Gelsolin family protein.)
genome : 12,629,148 - 12,693,228 (64,081)
query : 1 - 2,571 (2,571/2,586)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15.5, nucl 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006490)
HIX0006490
HIT000011050
(
AK027778
)
Representative transcript
(Villin/Gelsolin family protein.)
genome : 12,629,148 - 12,693,227 (64,080)
query : 1 - 2,571 (2,571/2,571)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR007122 : Villin/Gelsolin
IPR007123 : Gelsolin-like domain
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15.5, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006490)
HIX0006490
HIT000590702 (
ENST00000486980
)
(Gelsolin-like domain containing protein.)
genome : 12,635,174 - 12,664,696 (29,523)
query : 1 - 558 (558/558)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, extr 7, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006490)
HIX0006490
HIT000543552 (
ENST00000445618
)
(Villin/Gelsolin family protein.)
genome : 12,644,138 - 12,693,225 (49,088)
query : 1 - 2,518 (2,518/2,518)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15.5, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006490)
HIX0006490
HIT000578040 (
ENST00000473722
)
(Villin/Gelsolin family protein.)
genome : 12,650,656 - 12,666,436 (15,781)
query : 1 - 656 (656/656)
5 exons
identity = 0.992
5'(1.000;1.000;1.000;1.000;0.978)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 18, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006490)
HIX0006490
HIT000580834 (
ENST00000476649
)
(Villin/Gelsolin family protein.)
genome : 12,662,463 - 12,666,166 (3,704)
query : 1 - 969 (969/969)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, extr 9, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006490)
HIX0006490
HIT000082233
(
AK075198
)
(Villin/Gelsolin family protein.)
genome : 12,665,444 - 12,692,725 (27,282)
query : 1 - 1,584 (1,584/1,584)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007122 : Villin/Gelsolin
IPR007123 : Gelsolin-like domain
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 18, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006490)
HIX0168451
HIT000535022 (
ENST00000437088
)
(Non-protein coding transcript.)
genome : 12,693,804 - 12,694,610 (807)
query : 1 - 432 (432/432)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168451)
HIX0033983
HIT000097580
(
BC043260
)
Representative transcript
(APITD1-CORT protein isoform 1.)
genome : 12,723,721 - 12,726,372 (2,652)
query : 5 - 2,656 (2,652/2,673)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033983)
HIX0006491
HIT000320516 (
NM_212460
)
(Small GTPase superfamily, ARF/SAR type protein.)
genome : 12,726,452 - 12,730,559 (4,108)
query : 1 - 2,983 (2,983/2,983)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, extr 7, mito 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006491)
HIX0006491
HIT000366278 (
NM_001037164
)
(Small GTPase superfamily, ARF/SAR type protein.)
genome : 12,726,452 - 12,730,559 (4,108)
query : 1 - 2,986 (2,986/2,986)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, extr 7, mito 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006491)
HIX0006491
HIT000479988 (
ENST00000396662
)
(Small GTPase superfamily, ARF/SAR type protein.)
genome : 12,726,481 - 12,728,804 (2,324)
query : 1 - 1,296 (1,296/1,296)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, extr 7, mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006491)
HIX0006491
HIT000095532_03
(
BC039123
)
(Small GTPase superfamily, ARF/SAR type protein.)
genome : 12,726,483 - 12,730,340 (3,858)
query : 1 - 3,860 (3,860/3,875)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.999
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, extr 7, mito 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006491)
HIX0006491
HIT000030143
(
BC001111
)
Representative transcript
(ADP-ribosylation factor-like protein 4A;)
genome : 12,726,533 - 12,728,801 (2,269)
query : 1 - 1,144 (1,144/1,165)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 0.999
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, extr 7, mito 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006491)
HIX0006491
HIT000031370
(
BC003027
)
(ADP-ribosylation factor-like protein 4A;)
genome : 12,726,533 - 12,728,801 (2,269)
query : 1 - 1,144 (1,144/1,165)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 0.999
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, extr 7, mito 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006491)
HIX0006491
HIT000310737 (
ENST00000356797
)
(Small GTPase superfamily, ARF/SAR type protein.)
genome : 12,726,533 - 12,728,801 (2,269)
query : 1 - 1,147 (1,147/1,147)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, extr 7, mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006491)
HIX0006491
HIT000479990 (
ENST00000396664
)
(Small GTPase superfamily, ARF/SAR type protein.)
genome : 12,726,533 - 12,728,801 (2,269)
query : 1 - 1,144 (1,144/1,144)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, extr 7, mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006491)
HIX0006491
HIT000537655 (
ENST00000439721
)
(Conserved hypothetical protein.)
genome : 12,726,750 - 12,728,031 (1,282)
query : 1 - 845 (845/845)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13.5, cyto 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006491)
HIX0006491
HIT000202405 (
NM_005738
)
(Small GTPase superfamily, ARF/SAR type protein.)
genome : 12,726,911 - 12,730,559 (3,649)
query : 1 - 3,212 (3,212/3,212)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, extr 7, mito 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006491)
HIX0006491
HIT000656050 (
NM_001195396
)
(Small GTPase superfamily, ARF/SAR type protein.)
genome : 12,726,911 - 12,730,559 (3,649)
query : 1 - 3,209 (3,209/3,209)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, extr 7, mito 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006491)
HIX0006491
HIT000479989 (
ENST00000396663
)
(Small GTPase superfamily, ARF/SAR type protein.)
genome : 12,726,961 - 12,730,559 (3,599)
query : 1 - 3,162 (3,162/3,162)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, extr 7, mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006491)
HIX0006491
HIT000432099
(
AK313233
)
(ADP-ribosylation factor-like protein 4A;)
genome : 12,727,258 - 12,728,482 (1,225)
query : 1 - 788 (788/788)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, extr 7, mito 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006491)
HIX0006491
HIT000505015 (
ENST00000404894
)
(Small GTPase superfamily, ARF/SAR type protein.)
genome : 12,727,260 - 12,728,539 (1,280)
query : 1 - 840 (840/840)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, extr 7, mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006491)
HIX0006491
HIT000221238
(
U73960
)
(ADP-ribosylation factor-like protein 4A;)
genome : 12,727,290 - 12,728,803 (1,514)
query : 1 - 1,077 (1,077/1,077)
2 exons
identity = 0.996
5'(1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, extr 7, mito 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006491)
HIX0006491
HIT000080738
(
AF493890
)
(Small GTPase superfamily, ARF/SAR type protein.)
genome : 12,727,880 - 12,728,482 (603)
query : 1 - 603 (603/603)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, extr 7, mito 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006491)
HIX0123450
HIT000344227 (
ENST00000362600
)
(Conserved hypothetical protein.)
genome : 12,740,383 - 12,740,514 (132)
query : 1 - 132 (132/132)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123450)
HIX0168056
HIT000508998 (
ENST00000411042
)
(Hypothetical short protein.)
genome : 12,916,309 - 12,916,571 (263)
query : 1 - 263 (263/263)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168056)
HIX0168529
HIT000539190 (
ENST00000441256
)
(Conserved hypothetical protein.)
genome : 12,962,170 - 12,962,545 (376)
query : 1 - 376 (376/376)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 8.5, extr 7, mito_pero 6.5,
cyto_plas 6.5, cyto_golg 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168529)
HIX0167697
HIT000541881 (
ENST00000443947
)
(Conserved hypothetical protein.)
genome : 13,141,016 - 13,142,014 (999)
query : 1 - 575 (575/575)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 8, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167697)
HIX0167697
HIT000509476 (
ENST00000411542
)
(Conserved hypothetical protein.)
genome : 13,141,097 - 13,743,774 (602,678)
query : 1 - 526 (526/526)
5 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, extr 8, cyto 7.5, cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167697)
HIX0168756
HIT000554743 (
ENST00000456809
)
(Conserved hypothetical protein.)
genome : 13,378,826 - 13,404,674 (25,849)
query : 1 - 842 (842/842)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 10, cyto_mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168756)
HIX0217916
HIT000559879 (
NM_001134232
)
(Protein of unknown function DUF1356, TMEM106 family protein.)
genome : 12,250,848 - 12,276,890 (26,043)
query : 1 - 6,320 (6,320/6,320)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217916)
HIX0217916
HIT000479994 (
ENST00000396668
)
(Protein of unknown function DUF1356, TMEM106 family protein.)
genome : 12,250,867 - 12,272,715 (21,849)
query : 1 - 2,126 (2,126/2,126)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217916)
HIX0217916
HIT000004609
(
AK002135
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,250,924 - 12,272,713 (21,790)
query : 1 - 2,067 (2,067/2,067)
8 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, E.R. 4, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217916)
HIX0217916
HIT000479993 (
ENST00000396667
)
(Protein of unknown function DUF1356, TMEM106 family protein.)
genome : 12,250,926 - 12,276,886 (25,961)
query : 1 - 6,432 (6,432/6,432)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217916)
HIX0217916
HIT000091493
(
BC028108
)
(Protein of unknown function DUF1356, TMEM106 family protein.)
genome : 12,250,933 - 12,272,714 (21,782)
query : 1 - 2,058 (2,058/2,129)
8 exons
identity = 0.997
5'(1.000;0.995;1.000;1.000;0.993;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR009790 : Protein of unknown function DUF1356, TMEM106
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, E.R. 4, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217916)
HIX0217916
HIT000052248
(
BC039741
)
(Protein of unknown function DUF1356, TMEM106 family protein.)
genome : 12,250,945 - 12,272,527 (21,583)
query : 9 - 1,868 (1,860/1,928)
8 exons
identity = 0.997
5'(0.991;1.000;1.000;1.000;0.993;1.000;1.000;
0.997)3'
coverage = 0.996
InterPro :
IPR009790 : Protein of unknown function DUF1356, TMEM106
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217916)
HIX0217916
HIT000331043
(
AK223263
)
(Protein of unknown function DUF1356, TMEM106 family protein.)
genome : 12,250,950 - 12,272,394 (21,445)
query : 1 - 1,722 (1,722/1,746)
8 exons
identity = 0.998
5'(1.000;0.995;1.000;0.994;1.000;0.980;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR009790 : Protein of unknown function DUF1356, TMEM106
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, nucl 3, cyto 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217916)
HIX0217916
HIT000596229 (
ENST00000492762
)
(Protein of unknown function DUF1356, TMEM106 family protein.)
genome : 12,269,374 - 12,271,155 (1,782)
query : 1 - 590 (590/590)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217916)
HIX0217916
HIT000567577 (
ENST00000462754
)
(Protein of unknown function DUF1356, TMEM106 family protein.)
genome : 12,269,984 - 12,272,026 (2,043)
query : 1 - 699 (699/699)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 12, cyto 7.5, cyto_nucl 7.5, extr 6, cysk_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217916)
HIX0006489
HIT000560222 (
NM_001135924
)
(von Willebrand factor D and EGF domain-containing protein; Precursor;)
genome : 12,370,509 - 12,443,852 (73,344)
query : 1 - 5,583 (5,583/5,583)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, nucl 3, cyto 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006489)
HIX0006489
HIT000111295 (
ENST00000275358
)
(von Willebrand factor D and EGF domain-containing protein; Precursor;)
genome : 12,370,511 - 12,443,531 (73,021)
query : 1 - 5,260 (5,260/5,260)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, nucl 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006489)
HIX0006489
HIT000502739
(
BC144316
)
Representative transcript
(von Willebrand factor D and EGF domain-containing protein; Precursor;)
genome : 12,370,544 - 12,443,567 (73,024)
query : 1 - 5,932 (5,932/5,932)
30 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.985;0.995;1.000;
1.000;0.990;1.000;0.993;0.998;1.000;1.000;
1.000;1.000;0.993;0.989;1.000;1.000;1.000;
0.995;0.996)5'
coverage = 1.000
InterPro :
IPR001846 : von Willebrand factor, type D domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, nucl 1, cyto 1, cyto_nucl 1, pero 1, lyso 1,
golg 1, cyto_pero 1, cyto_golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006489)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC076621
Gallus
sp. (Chicken) : CR524362
Equus
sp. (Horse) : ENSECAT00000024035
Oryzias
sp. (Medaka) : ENSORLT00000000140
Rattus
sp. (Rat) : ENSRNOT00000029602
Tetraodon
sp. (Tetraodon) : GSTENT00031887001
Takifugu
sp. (Fugu) : SINFRUT00000131138
Danio
sp. (Zebrafish) : XM_001345324
Monodelphis
sp. (Opossum) : XM_001377137
Pan
sp. (Chimpanzee) : XM_518974
Canis
sp. (Dog) : XM_539440
HIX0006489
HIT000502741
(
BC144319
)
(von Willebrand factor D and EGF domain-containing protein; Precursor;)
genome : 12,370,544 - 12,443,567 (73,024)
query : 1 - 4,701 (4,701/4,701)
26 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.990;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;1.000;0.991;
0.990;1.000;0.993;0.999;1.000;0.993;0.989;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001846 : von Willebrand factor, type D domain
IPR013032 : EGF-like, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006489)
HIX0006489
HIT000550510 (
ENST00000452576
)
(von Willebrand factor D and EGF domain-containing protein; Precursor;)
genome : 12,370,544 - 12,443,567 (73,024)
query : 1 - 5,936 (5,936/5,936)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, nucl 3, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006489)
HIX0006489
HIT000620487 (
ENST00000521169
)
(von Willebrand factor D and EGF domain-containing protein; Precursor;)
genome : 12,370,544 - 12,443,567 (73,024)
query : 1 - 4,700 (4,700/4,700)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006489)
HIX0217915
HIT000485862 (
NM_001112706
)
(Adseverin; Scinderin;)
genome : 12,610,203 - 12,693,228 (83,026)
query : 1 - 3,246 (3,246/3,261)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_golg 10.5, nucl 7, cysk 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217915)
HIX0217915
HIT000001620
(
AB067492
)
(Adseverin isoform 2.)
genome : 12,610,203 - 12,692,729 (82,527)
query : 1 - 2,569 (2,569/2,570)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217915)
HIX0217915
HIT000134387 (
ENST00000341757
)
(Adseverin isoform 2.)
genome : 12,610,203 - 12,692,729 (82,527)
query : 1 - 2,569 (2,569/2,569)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217915)
HIX0217915
HIT000423160
(
AK290363
)
Representative transcript
(Adseverin; Scinderin;)
genome : 12,610,312 - 12,692,472 (82,161)
query : 3 - 2,383 (2,381/2,383)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR007122 : Villin/Gelsolin
IPR007123 : Gelsolin-like domain
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_golg 10.5, nucl 7, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217915)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720675
Mus
sp. (Mouse) : AK173295
Rattus
sp. (Rat) : AY324394
Danio
sp. (Zebrafish) : BC056544
Danio
sp. (Zebrafish) : BC155581
Tetraodon
sp. (Tetraodon) : CR726827
Monodelphis
sp. (Opossum) : ENSMODT00000033789
Oryzias
sp. (Medaka) : ENSORLT00000006547
Pongo
sp. (Orangutan) : ENSPPYT00000020709
Tetraodon
sp. (Tetraodon) : GSTENT00003405001
Takifugu
sp. (Fugu) : SINFRUT00000141693
Takifugu
sp. (Fugu) : SINFRUT00000179852
Bos
sp. (Cow) : X78479
Macaca
sp. (Macaque) : XM_001082780
Pan
sp. (Chimpanzee) : XM_001147466
Equus
sp. (Horse) : XM_001495118
Canis
sp. (Dog) : XM_532479
HIX0217915
HIT000114690 (
ENST00000297029
)
(Adseverin; Scinderin;)
genome : 12,610,312 - 12,693,228 (82,917)
query : 1 - 3,137 (3,137/3,137)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_golg 10.5, nucl 7, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217915)
HIX0217915
HIT000082158
(
AK075123
)
(Adseverin; Scinderin;)
genome : 12,610,345 - 12,692,725 (82,381)
query : 2 - 2,602 (2,601/2,602)
16 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
InterPro :
IPR007122 : Villin/Gelsolin
IPR007123 : Gelsolin-like domain
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_golg 10.5, nucl 7, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217915)
HIX0217915
HIT000039078
(
BC021090
)
(Adseverin; Scinderin;)
genome : 12,610,364 - 12,692,726 (82,363)
query : 1 - 2,583 (2,583/2,606)
16 exons
identity = 1.000
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007122 : Villin/Gelsolin
IPR007123 : Gelsolin-like domain
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_golg 10.5, nucl 7, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217915)
HIX0217915
HIT000075956
(
AF276507
)
(Adseverin; Scinderin;)
genome : 12,610,413 - 12,692,368 (81,956)
query : 1 - 2,176 (2,176/2,178)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.989;
1.000;1.000;1.000;0.994;0.994;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR007122 : Villin/Gelsolin
IPR007123 : Gelsolin-like domain
IPR029006 : ADF-H/Gelsolin-like domain
GO :
0003779 : Molecular Function : actin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_golg 10.5, nucl 7, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217915)
AC092213.4
12000001-12109419 F +
NCBI
AC007270.2
12109420-12182161 F -
NCBI
AC007745.3
12182162-12233526 F -
NCBI
AC007321.2
12233527-12392096 F -
NCBI
AC013470.10
12392097-12560819 F -
NCBI
AC092064.4
12560820-12575483 F +
NCBI
AC005281.2
12575484-12682721 F +
NCBI
AC073232.7
12682722-12685767 F +
NCBI
AC011891.3
12685768-12759048 F +
NCBI
AC005228.1
12759049-12860856 F +
NCBI
AC006000.3
12860857-12984826 F +
NCBI
AC007243.4
12984827-13111017 F +
NCBI
AC005681.2
13111018-13240806 F +
NCBI
AC006996.3
13240807-13389425 F +
NCBI
AC011287.4
13389426-13520368 F +
NCBI
AC084312.4
13520369-13542228 F +
NCBI
AC073327.4
13542229-13600000 F +
NCBI