bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0007090
HIT000122648 (
ENST00000321063
)
(Plexin-A4; Precursor;)
genome : 131,808,091 - 132,261,323 (453,233)
query : 1 - 13,061 (13,061/13,061)
32 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, pero 8, mito 7.5, cyto_mito 5.5, cyto 2.5,
extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007090)
HIX0007090
HIT000486243 (
NM_020911
)
(Plexin-A4; Precursor;)
genome : 131,808,091 - 132,261,323 (453,233)
query : 1 - 13,061 (13,061/13,061)
32 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, pero 8, mito 7.5, cyto_mito 5.5, cyto 2.5,
extr 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007090)
HIX0007090
HIT000313303 (
ENST00000359827
)
(Plexin-A4; Precursor;)
genome : 131,808,100 - 132,262,060 (453,961)
query : 1 - 13,786 (13,786/13,786)
32 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, pero 8, mito 7.5, cyto_mito 5.5, cyto 2.5,
extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007090)
HIX0007090
HIT000001265
(
AB046770
)
Representative transcript
(Plexin-A4 isoform 1 precursor.)
genome : 131,808,100 - 132,174,127 (366,028)
query : 1 - 11,518 (11,518/11,518)
30 exons
identity = 0.997
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, cyto_nucl 9.33333, cyto_mito 7, nucl 6.5,
plas 5.5, extr_plas 4, mito_pero 3.33333, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007090)
HIX0168735
HIT000553376 (
ENST00000455442
)
(Hypothetical short protein.)
genome : 132,037,093 - 132,052,735 (15,643)
query : 1 - 526 (526/526)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 6.5, cyto_nucl 5.83333, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168735)
HIX0007090
HIT000252894
(
AY358850
)
(Plexin-A4 isoform 3 precursor.)
genome : 132,068,245 - 132,192,874 (124,630)
query : 1 - 2,597 (2,597/2,597)
3 exons
identity = 0.996
3'(0.994;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001627 : Sema domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007090)
HIX0007090
HIT000485751 (
NM_001105543
)
(Plexin-A4 isoform 3 precursor.)
genome : 132,068,247 - 132,261,323 (193,077)
query : 1 - 3,408 (3,408/3,408)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 14, cyto_mito 8.16667,
mito_pero 7.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007090)
HIX0007090
HIT000043301
(
AK123428
)
(Plexin-A4 isoform 3 precursor.)
genome : 132,068,247 - 132,261,229 (192,983)
query : 1 - 3,310 (3,310/3,310)
4 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001627 : Sema domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 14, cyto_mito 8.16667,
mito_pero 7.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007090)
HIX0007090
HIT000521441 (
ENST00000423507
)
(Plexin-A4 isoform 3 precursor.)
genome : 132,068,247 - 132,261,229 (192,983)
query : 1 - 3,314 (3,314/3,314)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 14, cyto_mito 8.16667,
mito_pero 7.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007090)
HIX0207864
eHIT000021564 ( ESTsASS_7_125 )
Representative transcript
(Non-protein coding transcript.)
genome : 132,093,776 - 132,132,958 (39,183)
query : 1 - 245 (245/245)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207864)
ESTs used for assembly :
AI025893
HIX0022582
HIT000020863
(
AK096008
)
Representative transcript
(Conserved hypothetical protein.)
genome : 132,140,889 - 132,142,696 (1,808)
query : 1 - 1,808 (1,808/1,808)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, extr_plas 11, mito 9, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022582)
HIX0058347
HIT000328491
(
AB073904
)
Representative transcript
(Conserved hypothetical protein.)
genome : 132,147,615 - 132,150,152 (2,538)
query : 4 - 2,541 (2,538/2,541)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 3, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058347)
HIX0007090
HIT000318483 (
NM_181775
)
(Plexin-A4 isoform 2 precursor.)
genome : 132,169,521 - 132,333,447 (163,927)
query : 1 - 2,000 (2,000/2,020)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 13, cyto_mito 8.66667,
mito_pero 8.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007090)
HIX0007090
HIT000025640
(
AL137352
)
(Plexin-A4 isoform 2 precursor.)
genome : 132,169,521 - 132,192,838 (23,318)
query : 1 - 1,009 (1,009/1,029)
3 exons
identity = 0.999
3'(1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR001627 : Sema domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cysk 7, cyto_mito 7, cyto_golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007090)
HIX0007090
HIT000050962
(
BC028744
)
(Plexin-A4 isoform 2 precursor.)
genome : 132,169,521 - 132,333,447 (163,927)
query : 1 - 2,000 (2,000/2,015)
5 exons
identity = 0.999
3'(0.992;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001627 : Sema domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 13, cyto_mito 8.66667,
mito_pero 8.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007090)
HIX0007090
HIT000359819 (
ENST00000378539
)
(Plexin-A4 isoform 2 precursor.)
genome : 132,169,517 - 132,333,447 (163,931)
query : 1 - 2,004 (2,004/2,004)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 13, cyto_mito 8.66667,
mito_pero 8.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007090)
HIX0007094
HIT000022461
(
AK097607
)
Representative transcript
(Conserved hypothetical protein.)
genome : 132,333,553 - 132,413,528 (79,976)
query : 1 - 1,998 (1,998/1,998)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.996;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto_nucl 4.66667, cyto_pero 4, cyto 3.5,
nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007094)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000021003
Pan
sp. (Chimpanzee) : XM_001136234
HIX0007094
HIT000127859 (
ENST00000332558
)
(Conserved hypothetical protein.)
genome : 132,333,553 - 132,413,528 (79,976)
query : 1 - 1,998 (1,998/1,998)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto_nucl 4.66667, cyto_pero 4, cyto 3.5,
nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007094)
HIX0007094
HIT000726614 (
NR_046323
)
(Conserved hypothetical protein.)
genome : 132,333,553 - 132,413,528 (79,976)
query : 1 - 1,998 (1,998/1,998)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto_nucl 4.66667, cyto_pero 4, cyto 3.5,
nucl 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007094)
HIX0007094
HIT000685731 (
ENST00000573229
)
(Hypothetical protein.)
genome : 132,344,290 - 132,357,053 (12,764)
query : 1 - 601 (601/601)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 7.5, nucl 6, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007094)
HIX0123461
HIT000345747 (
ENST00000364139
)
(Non-protein coding transcript.)
genome : 132,437,783 - 132,437,886 (104)
query : 1 - 104 (104/104)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123461)
HIX0168440
HIT000534313 (
ENST00000436379
)
(Hypothetical short protein.)
genome : 132,443,730 - 132,445,392 (1,663)
query : 1 - 751 (751/751)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 14, cyto_mito 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168440)
HIX0000319
HIT000035317
(
BC011596
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial;)
genome : 132,469,633 - 132,766,840 (297,208)
query : 1 - 1,592 (1,592/1,652)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR007964 : Protein of unknown function DUF737
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 12, cyto_nucl 9.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000002902
(
AK000427
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial;)
genome : 132,469,623 - 132,766,833 (297,211)
query : 2 - 1,596 (1,595/1,623)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 12, cyto_nucl 9.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000206675 (
NM_017812
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial;)
genome : 132,469,623 - 132,766,833 (297,211)
query : 1 - 1,595 (1,595/1,622)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 12, cyto_nucl 9.5, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000036864
(
BC014839
)
Representative transcript
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial;)
genome : 132,469,629 - 132,766,842 (297,214)
query : 1 - 1,598 (1,598/1,613)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR007964 : Protein of unknown function DUF737
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 12, cyto_nucl 9.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK002889
Danio
sp. (Zebrafish) : AY391426
Bos
sp. (Cow) : BC102347
Gallus
sp. (Chicken) : BX935835
Macaca
sp. (Macaque) : DQ148205
Equus
sp. (Horse) : ENSECAT00000000729
Pongo
sp. (Orangutan) : ENSPPYT00000029306
Takifugu
sp. (Fugu) : SINFRUT00000183140
Pan
sp. (Chimpanzee) : XM_001136895
Monodelphis
sp. (Opossum) : XM_001367264
Rattus
sp. (Rat) : XM_238346
Canis
sp. (Dog) : XM_843362
HIX0000319
HIT000108468_01 (
ENST00000262570
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial;)
genome : 132,469,629 - 132,766,842 (297,214)
query : 1 - 1,598 (1,598/1,598)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 12, cyto_nucl 9.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000048804
(
AK129533
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial;)
genome : 132,469,630 - 132,766,850 (297,221)
query : 1 - 1,554 (1,554/1,554)
8 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.955;0.976;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR007964 : Protein of unknown function DUF737
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12, cyto_nucl 9.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000546812 (
ENST00000448878
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial;)
genome : 132,469,644 - 132,766,814 (297,171)
query : 1 - 1,570 (1,570/1,570)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 12, cyto_nucl 9.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000580735 (
ENST00000476546
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial;)
genome : 132,469,666 - 132,766,828 (297,163)
query : 1 - 1,462 (1,462/1,462)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 8, extr 7, plas 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000599748 (
ENST00000496427
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial;)
genome : 132,470,271 - 132,736,822 (266,552)
query : 1 - 721 (721/721)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000429102
(
AK310236
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial;)
genome : 132,470,286 - 132,766,830 (296,545)
query : 1 - 1,310 (1,310/1,310)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007964 : Protein of unknown function DUF737
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, pero 7, cyto_plas 7, nucl 6, mito_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000521569 (
ENST00000423635
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial;)
genome : 132,470,286 - 132,766,830 (296,545)
query : 1 - 1,310 (1,310/1,310)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, pero 7, cyto_plas 7, nucl 6, mito_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0168702
HIT000551012 (
ENST00000453078
)
(Hypothetical short protein.)
genome : 132,515,453 - 132,534,353 (18,901)
query : 1 - 799 (799/799)
4 exons
identity = 0.991
5'(1.000;1.000;1.000;0.986)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 6.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168702)
HIX0000319
HIT000571285 (
ENST00000466644
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial;)
genome : 132,522,361 - 132,766,817 (244,457)
query : 1 - 1,442 (1,442/1,442)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0007095
HIT000008212
(
AK024938
)
Representative transcript
(Hypothetical short protein.)
genome : 132,642,533 - 132,644,331 (1,799)
query : 1 - 1,799 (1,799/1,864)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.984
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, extr 7, lyso 3, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007095)
HIX0000319
HIT000585134 (
ENST00000481152
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial;)
genome : 132,658,188 - 132,754,994 (96,807)
query : 1 - 890 (890/890)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000488695
(
AK294071
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial;)
genome : 132,658,359 - 132,766,800 (108,442)
query : 1 - 898 (898/898)
5 exons
identity = 0.998
3'(0.998;0.992;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007964 : Protein of unknown function DUF737
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 8, mito 4, cyto_pero 4, cyto_plas 4,
cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000641798 (
ENST00000542753
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial;)
genome : 132,658,359 - 132,766,800 (108,442)
query : 1 - 898 (898/898)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, extr 8, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000126021_02 (
ENST00000329251
)
(Elongation factor 1-gamma; EF-1-gamma; eEF-1B gamma;)
genome : 132,719,289 - 132,720,700 (1,412)
query : 112 - 1,523 (1,412/1,523)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 0.927
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12.5, nucl 10.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000495353
(
AK300729
)
(Elongation factor 1-gamma; EF-1-gamma; eEF-1B gamma;)
genome : 132,719,291 - 132,720,699 (1,409)
query : 1 - 1,008 (1,008/1,008)
3 exons
identity = 0.991
3'(0.997;0.996;0.965)5'
coverage = 1.000
InterPro :
IPR004045 : Glutathione S-transferase, N-terminal
IPR012336 : Thioredoxin-like fold
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000495310
(
AK300686
)
(Elongation factor 1-gamma; EF-1-gamma; eEF-1B gamma;)
genome : 132,719,337 - 132,720,700 (1,364)
query : 2 - 980 (979/980)
2 exons
identity = 0.994
3'(0.996;0.991)5'
coverage = 0.999
InterPro :
IPR004045 : Glutathione S-transferase, N-terminal
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR012336 : Thioredoxin-like fold
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.3333, cyto_pero 9.33333, mito 7,
nucl 4.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000692871_01 (
ENST00000580961
)
(Non-protein coding transcript.)
genome : 132,719,620 - 132,719,675 (56)
query : 1 - 56 (56/56)
1 exon
identity = 0.982
3'(0.982)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000711802_01 (
ENST00000600052
)
(Non-protein coding transcript.)
genome : 132,719,620 - 132,719,675 (56)
query : 1 - 56 (56/56)
1 exon
identity = 0.982
3'(0.982)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000725532_01 (
NR_037427
)
(Non-protein coding transcript.)
genome : 132,719,620 - 132,719,675 (56)
query : 1 - 56 (56/56)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0000319
HIT000555876 (
ENST00000457942
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial;)
genome : 132,720,509 - 132,766,848 (46,340)
query : 1 - 559 (559/559)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12.5, cyto 10.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000319)
HIX0033774
HIT000070259
(
AF119872
)
Representative transcript
(Conserved hypothetical protein.)
genome : 132,725,113 - 132,726,696 (1,584)
query : 14 - 1,597 (1,584/1,597)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.3333, nucl 10.5, extr 10, cyto 9,
cyto_pero 5.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033774)
HIX0168219
HIT000625428_02 (
ENST00000526214
)
(Tetratricopeptide-like helical domain containing protein.)
genome : 132,854,167 - 132,855,272 (1,106)
query : 1 - 1,110 (1,110/1,110)
1 exon
identity = 0.961
3'(0.961)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 10, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168219)
HIX0168219
HIT000519113 (
ENST00000421179
)
(Conserved hypothetical protein.)
genome : 132,854,174 - 132,855,272 (1,099)
query : 1 - 1,099 (1,099/1,099)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, cyto 9, mito 7, extr 5, cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168219)
HIX0168219
HIT000621726_06 (
ENST00000522430
)
(Tetratricopeptide-like helical domain containing protein.)
genome : 132,854,174 - 132,855,272 (1,099)
query : 1 - 1,102 (1,102/1,102)
1 exon
identity = 0.966
3'(0.966)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 12, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168219)
HIX0168219
HIT000645008_05 (
ENST00000545963
)
(Hypothetical protein.)
genome : 132,854,908 - 132,855,272 (365)
query : 1 - 365 (365/366)
1 exon
identity = 0.959
3'(0.959)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10.5, mito 8, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168219)
HIX0168219
HIT000477112_03 (
ENST00000393673
)
(Hypothetical protein.)
genome : 132,854,912 - 132,855,272 (361)
query : 1 - 364 (364/366)
1 exon
identity = 0.959
3'(0.959)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 9, mito 8, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168219)
HIX0217577
HIT000366269 (
NM_001037126
)
(Sec8 exocyst complex component specific domain containing protein.)
genome : 132,937,823 - 133,168,945 (231,123)
query : 1 - 1,604 (1,604/1,620)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217577)
HIX0217577
HIT000476625 (
ENST00000393161
)
(Sec8 exocyst complex component specific domain containing protein.)
genome : 132,937,829 - 133,168,951 (231,123)
query : 1 - 1,604 (1,604/1,604)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217577)
HIX0217577
HIT000040127
(
BC026174
)
Representative transcript
(Sec8 exocyst complex component specific domain containing protein.)
genome : 132,937,851 - 133,165,651 (227,801)
query : 5 - 2,187 (2,183/2,220)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.996
InterPro :
IPR007191 : Sec8 exocyst complex component specific domain
GO :
0000145 : Cellular Component : exocyst
0006904 : Biological Process : vesicle docking involved in exocytosis
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217577)
HIX0217577
HIT000566911 (
ENST00000462055
)
(Sec8 exocyst complex component specific domain containing protein.)
genome : 132,937,851 - 133,165,812 (227,962)
query : 1 - 2,344 (2,344/2,364)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217577)
HIX0217577
HIT000585058 (
ENST00000481074
)
(Conserved hypothetical protein.)
genome : 132,937,855 - 132,938,774 (920)
query : 1 - 568 (568/568)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 7, cyto_nucl 7, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217577)
HIX0217577
HIT000595814 (
ENST00000492326
)
(Sec8 exocyst complex component specific domain containing protein.)
genome : 132,938,121 - 132,990,665 (52,545)
query : 1 - 549 (549/549)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 4.5, cyto_nucl 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217577)
HIX0168190
HIT000517443 (
ENST00000419509
)
(Conserved hypothetical protein.)
genome : 132,999,763 - 133,000,167 (405)
query : 1 - 405 (405/405)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 6.5, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168190)
HIX0217577
HIT000584834 (
ENST00000480840
)
(Conserved hypothetical protein.)
genome : 133,041,141 - 133,059,782 (18,642)
query : 1 - 388 (388/388)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 12, extr 6, E.R._mito 6, mito_pero 6,
mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217577)
HIX0217577
HIT000090180
(
BC020607
)
(Conserved hypothetical protein.)
genome : 133,059,581 - 133,165,804 (106,224)
query : 1 - 1,323 (1,323/1,352)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 14, extr 6, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217577)
HIX0033857
HIT000250594
(
AL389977
)
Representative transcript
(Conserved hypothetical protein.)
genome : 133,116,745 - 133,121,255 (4,511)
query : 1 - 4,514 (4,514/4,528)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, nucl 5, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033857)
HIX0217577
HIT000598076 (
ENST00000494685
)
(Non-protein coding transcript.)
genome : 133,163,669 - 133,164,893 (1,225)
query : 1 - 313 (313/313)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217577)
HIX0217577
HIT000601268 (
ENST00000498024
)
(Conserved hypothetical protein.)
genome : 133,164,201 - 133,164,893 (693)
query : 1 - 329 (329/329)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 2.5, cyto_nucl 2.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217577)
HIX0217577
HIT000049252
(
AK129981
)
(Conserved hypothetical protein.)
genome : 133,168,851 - 133,169,833 (983)
query : 1 - 983 (983/983)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15, extr 10, plas 2, cyto 2, lyso 2, cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217577)
HIX0020142
HIT000587672 (
ENST00000483800
)
(Conserved hypothetical protein.)
genome : 133,236,353 - 133,580,439 (344,087)
query : 1 - 559 (559/559)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 15.5, cyto_plas 12.3333, nucl 4.5,
mito 2, pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020142)
HIX0020142
HIT000020350
(
AK095495
)
Representative transcript
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 133,261,216 - 133,750,511 (489,296)
query : 3 - 3,041 (3,039/3,041)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;0.993)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16.5, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020142)
HIX0020142
HIT000644193 (
ENST00000545148
)
(Conserved hypothetical protein.)
genome : 133,261,216 - 133,750,511 (489,296)
query : 1 - 3,038 (3,038/3,038)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16.5, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020142)
HIX0020142
HIT000573651 (
ENST00000469115
)
(Conserved hypothetical protein.)
genome : 133,261,216 - 133,580,489 (319,274)
query : 1 - 755 (755/755)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, extr 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020142)
HIX0020142
HIT000494551
(
AK299927
)
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 133,261,364 - 133,749,456 (488,093)
query : 1 - 1,947 (1,947/1,947)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 6, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020142)
HIX0020142
HIT000593516 (
ENST00000489931
)
(Conserved hypothetical protein.)
genome : 133,261,386 - 133,580,439 (319,054)
query : 1 - 578 (578/578)
4 exons
identity = 0.988
5'(0.983;0.959;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13, cysk 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020142)
HIX0020142
HIT000586040 (
ENST00000482089
)
(Conserved hypothetical protein.)
genome : 133,261,454 - 133,580,489 (319,036)
query : 1 - 628 (628/628)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 13.5, extr 4, nucl 2, mito 2,
extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020142)
HIX0020142
HIT000565277 (
ENST00000460346
)
(Conserved hypothetical protein.)
genome : 133,286,592 - 133,602,470 (315,879)
query : 1 - 762 (762/762)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13, extr 4, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020142)
HIX0033898
HIT000090603
(
BC022408
)
Representative transcript
(Hypothetical protein.)
genome : 133,375,118 - 133,376,469 (1,352)
query : 1 - 1,352 (1,352/1,381)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, plas 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033898)
HIX0168720
HIT000552561 (
ENST00000454627
)
(Cytochrome c oxidase, subunit Vb family protein.)
genome : 133,412,121 - 133,412,487 (367)
query : 1 - 367 (367/367)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10, nucl 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168720)
HIX0168483
HIT000537015 (
ENST00000439081
)
(Ribosomal protein S3Ae family protein.)
genome : 133,417,246 - 133,418,348 (1,103)
query : 1 - 782 (782/782)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 8, mito 6, nucl 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168483)
HIX0033952
HIT000096103
(
BC040296
)
Representative transcript
(Hypothetical short protein.)
genome : 133,446,300 - 133,447,624 (1,325)
query : 4 - 1,328 (1,325/1,344)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.997
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, nucl 10, cyto_nucl 8, cyto 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033952)
HIX0207962
HIT000567957 (
ENST00000463150
)
(Hypothetical short protein.)
genome : 133,452,850 - 133,456,240 (3,391)
query : 1 - 526 (526/526)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207962)
HIX0033941
HIT000095263
(
BC038554
)
Representative transcript
(Conserved hypothetical protein.)
genome : 133,485,246 - 133,509,641 (24,396)
query : 7 - 1,402 (1,396/1,432)
4 exons
identity = 0.999
3'(0.998;0.995;1.000;1.000)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 12.5, cyto_nucl 7.5, extr_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033941)
HIX0020142
HIT000576419 (
ENST00000472020
)
(Conserved hypothetical protein.)
genome : 133,579,816 - 133,622,709 (42,894)
query : 1 - 492 (492/492)
4 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, nucl 4.5, extr 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020142)
HIX0217914
HIT000208427 (
NM_021807
)
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 132,937,823 - 133,750,512 (812,690)
query : 1 - 4,191 (4,191/4,203)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217914)
HIX0217914
HIT000078647
(
AF380839
)
Representative transcript
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 132,937,829 - 133,750,512 (812,684)
query : 4 - 4,188 (4,185/4,218)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993)3'
coverage = 0.999
InterPro :
IPR007191 : Sec8 exocyst complex component specific domain
GO :
0000145 : Cellular Component : exocyst
0006904 : Biological Process : vesicle docking involved in exocytosis
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217914)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK173235
Danio
sp. (Zebrafish) : BC134096
Gallus
sp. (Chicken) : BX930184
Pongo
sp. (Orangutan) : CR857873
Oryzias
sp. (Medaka) : ENSORLT00000018212
Rattus
sp. (Rat) : U32498
Macaca
sp. (Macaque) : XM_001101461
Pan
sp. (Chimpanzee) : XM_001139207
Monodelphis
sp. (Opossum) : XM_001367316
Equus
sp. (Horse) : XM_001500865
Canis
sp. (Dog) : XM_539369
HIX0217914
HIT000026901
(
AL831989
)
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 132,937,829 - 133,750,512 (812,684)
query : 2 - 4,186 (4,185/4,205)
18 exons
identity = 0.999
5'(0.991;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR007191 : Sec8 exocyst complex component specific domain
GO :
0000145 : Cellular Component : exocyst
0006904 : Biological Process : vesicle docking involved in exocytosis
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217914)
HIX0217914
HIT000106560 (
ENST00000253861
)
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 132,937,829 - 133,750,512 (812,684)
query : 1 - 4,185 (4,185/4,185)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217914)
HIX0217914
HIT000010960
(
AK027688
)
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 132,937,829 - 133,750,511 (812,683)
query : 1 - 4,184 (4,184/4,184)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007191 : Sec8 exocyst complex component specific domain
GO :
0000145 : Cellular Component : exocyst
0006904 : Biological Process : vesicle docking involved in exocytosis
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217914)
HIX0217914
HIT000589789 (
ENST00000486013
)
(Exocyst complex component 4 isoform b.)
genome : 132,937,829 - 133,314,951 (377,123)
query : 1 - 1,600 (1,600/1,600)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217914)
HIX0217914
HIT000492815
(
AK298191
)
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 132,937,834 - 133,749,602 (811,769)
query : 1 - 2,263 (2,263/2,263)
13 exons
identity = 0.996
5'(1.000;0.981;0.993;0.989;1.000;1.000;0.985)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217914)
HIX0217914
HIT000262508
(
BC067263
)
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 132,937,846 - 133,750,512 (812,667)
query : 1 - 4,168 (4,168/4,233)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.990;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007191 : Sec8 exocyst complex component specific domain
GO :
0000145 : Cellular Component : exocyst
0006904 : Biological Process : vesicle docking involved in exocytosis
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217914)
HIX0217914
HIT000001415
(
AB051486
)
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 132,937,881 - 133,750,511 (812,631)
query : 1 - 4,132 (4,132/4,132)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217914)
HIX0217914
HIT000490028
(
AK295404
)
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 132,938,121 - 133,749,340 (811,220)
query : 1 - 3,027 (3,027/3,027)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007191 : Sec8 exocyst complex component specific domain
GO :
0000145 : Cellular Component : exocyst
0006904 : Biological Process : vesicle docking involved in exocytosis
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217914)
HIX0217914
HIT000638890 (
ENST00000539845
)
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 132,938,128 - 133,749,340 (811,213)
query : 1 - 3,020 (3,020/3,020)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217914)
HIX0217914
HIT000029205
(
AL834475
)
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 133,002,034 - 133,750,506 (748,473)
query : 15 - 3,513 (3,499/3,560)
14 exons
identity = 0.999
5'(1.000;0.996;1.000;1.000;1.000;1.000;1.000;
0.993)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217914)
HIX0217914
HIT000070911
(
AF132734
)
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 133,059,588 - 133,750,512 (690,925)
query : 5 - 3,147 (3,143/3,159)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217914)
HIX0217914
HIT000590165 (
ENST00000486409
)
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 133,080,893 - 133,314,891 (233,999)
query : 1 - 605 (605/605)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 10, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217914)
HIX0217914
HIT000583883 (
ENST00000479839
)
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 133,132,054 - 133,502,218 (370,165)
query : 1 - 543 (543/543)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 18, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217914)
HIX0217914
HIT000006025
(
AK022751
)
(Exocyst complex component 4; Exocyst complex component Sec8;)
genome : 133,160,097 - 133,750,511 (590,415)
query : 1 - 2,963 (2,963/2,963)
11 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_plas 14, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217914)
HIX0207864
eHIT000021564 ( ESTsASS_7_125 )
Representative transcript
(Non-protein coding transcript.)
genome : 132,093,776 - 132,132,958 (39,183)
query : 1 - 245 (245/245)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207864)
ESTs used for assembly :
AI025893
AC009364.9
132000001-132016886 F +
NCBI
AC011625.2
132016887-132131656 F +
NCBI
AC009785.8
132131657-132310801 F +
NCBI
AC026239.4
132310802-132321689 F +
NCBI
AC009365.9
132321690-132543184 F +
NCBI
AC093145.1
132543185-132550134 F +
NCBI
AC008038.1
132550135-132753079 F +
NCBI
AC083873.3
132753080-132857996 F +
NCBI
AC093146.2
132857997-132889264 F +
NCBI
AC083875.1
132889265-133011884 F +
NCBI
AC024086.5
133011885-133165116 F +
NCBI
AC009358.6
133165117-133189249 F +
NCBI
AC009178.4
133189250-133294996 F +
NCBI
AC007790.1
133294997-133502787 F +
NCBI
AC009180.9
133502788-133600000 F -
NCBI