bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0034030
HIT000518383 (
ENST00000420449
)
(Non-protein coding transcript.)
genome : 50,934,444 - 51,088,749 (154,306)
query : 1 - 285 (285/285)
4 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034030)
HIX0123465
HIT000345870 (
ENST00000364263
)
(Non-protein coding transcript.)
genome : 51,003,047 - 51,003,190 (144)
query : 1 - 144 (144/144)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123465)
HIX0217560
HIT000427584
(
AK308718
)
(WH2 domain containing protein.)
genome : 51,084,762 - 51,096,108 (11,347)
query : 1 - 1,589 (1,589/1,589)
4 exons
identity = 0.997
3'(0.996;0.996;0.992;1.000)5'
coverage = 1.000
InterPro :
IPR003124 : WH2 domain
GO :
0003779 : Molecular Function : actin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 18, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217560)
HIX0217560
HIT000026706
(
AL713786
)
Representative transcript
(WH2 domain containing protein.)
genome : 51,084,978 - 51,103,652 (18,675)
query : 1 - 7,697 (7,697/7,712)
5 exons
identity = 0.999
3'(0.997;0.996;1.000;0.998;1.000)5'
coverage = 1.000
InterPro :
IPR003124 : WH2 domain
GO :
0003779 : Molecular Function : actin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217560)
HIX0217560
HIT000567234 (
ENST00000462395
)
(WH2 domain containing protein.)
genome : 51,084,977 - 51,103,652 (18,676)
query : 1 - 7,697 (7,697/7,697)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217560)
HIX0034030
HIT000694506 (
ENST00000582616
)
(Hypothetical protein.)
genome : 51,085,160 - 51,090,687 (5,528)
query : 1 - 762 (762/762)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 7.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034030)
HIX0217664
HIT000428120
(
AK309254
)
Representative transcript
(Protein cordon-bleu.)
genome : 51,110,933 - 51,384,506 (273,574)
query : 1 - 1,729 (1,729/1,729)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.995;
1.000)5'
coverage = 1.000
InterPro :
IPR019025 : Cordon-bleu, ubiquitin-like domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217664)
HIX0217664
HIT000339923
(
BC111496
)
(Protein cordon-bleu.)
genome : 51,132,098 - 51,384,515 (252,418)
query : 1 - 2,330 (2,330/2,411)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.995;
1.000)5'
coverage = 1.000
InterPro :
IPR019025 : Cordon-bleu, ubiquitin-like domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217664)
HIX0217664
HIT000478910 (
ENST00000395540
)
(Cordon-bleu, ubiquitin-like domain containing protein.)
genome : 51,132,096 - 51,384,515 (252,420)
query : 1 - 2,332 (2,332/2,332)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217664)
HIX0217664
HIT000334996
(
BC094695
)
(Protein cordon-bleu.)
genome : 51,138,527 - 51,384,461 (245,935)
query : 1 - 3,783 (3,783/3,812)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.995;
1.000)5'
coverage = 1.000
InterPro :
IPR019025 : Cordon-bleu, ubiquitin-like domain
IPR029071 : Ubiquitin-related domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217664)
HIX0217664
HIT000539387 (
ENST00000441453
)
(Cordon-bleu, ubiquitin-like domain containing protein.)
genome : 51,138,525 - 51,384,461 (245,937)
query : 1 - 3,785 (3,785/3,785)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217664)
HIX0006688
HIT000014598
(
AK057991
)
Representative transcript
(Hypothetical short protein.)
genome : 51,192,531 - 51,194,854 (2,324)
query : 1 - 883 (883/884)
2 exons
identity = 0.995
3'(1.000;0.995)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 13, extr 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006688)
HIX0217664
HIT000547215 (
ENST00000449281
)
(Conserved hypothetical protein.)
genome : 51,258,695 - 51,384,168 (125,474)
query : 1 - 589 (589/589)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 10, nucl 6, extr 5, E.R._mito 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217664)
HIX0201258
HIT000544823 (
ENST00000446889
)
(Conserved hypothetical protein.)
genome : 51,327,126 - 51,327,864 (739)
query : 1 - 739 (739/739)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 8, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201258)
HIX0168163
HIT000516487 (
ENST00000418553
)
(Conserved hypothetical protein.)
genome : 51,449,981 - 51,452,357 (2,377)
query : 1 - 2,377 (2,377/2,377)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 12.5, nucl 10.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168163)
HIX0168163
HIT000458476_09
(
DQ591945
)
(Non-protein coding transcript.)
genome : 51,450,528 - 51,450,557 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168163)
HIX0168163
HIT000460367_09
(
DQ593836
)
Representative transcript
(Non-protein coding transcript.)
genome : 51,451,175 - 51,451,205 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168163)
HIX0208121
HIT000642949_02 (
ENST00000543904
)
(Hypothetical protein.)
genome : 51,452,463 - 51,452,868 (406)
query : 1 - 396 (396/396)
1 exon
identity = 0.975
5'(0.975)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208121)
HIX0217822
HIT000542777 (
ENST00000444843
)
(Conserved hypothetical protein.)
genome : 51,454,060 - 51,454,798 (739)
query : 1 - 739 (739/739)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 16, cyto 8.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217822)
HIX0207897
HIT000442094_11
(
DQ575563
)
Representative transcript
(Non-protein coding transcript.)
genome : 51,455,278 - 51,455,308 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207897)
HIX0217791
HIT000441174_11
(
DQ574643
)
Representative transcript
(Non-protein coding transcript.)
genome : 51,455,687 - 51,455,718 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217791)
HIX0167792
HIT000544603 (
ENST00000446669
)
(Conserved hypothetical protein.)
genome : 51,456,127 - 51,456,811 (685)
query : 1 - 685 (685/685)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167792)
HIX0217800
HIT000461099_04
(
DQ594568
)
Representative transcript
(Non-protein coding transcript.)
genome : 51,457,701 - 51,457,731 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217800)
HIX0217793
HIT000454770_07
(
DQ588239
)
Representative transcript
(Non-protein coding transcript.)
genome : 51,457,968 - 51,457,998 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217793)
HIX0217679
HIT000440383_08
(
DQ573852
)
Representative transcript
(Non-protein coding transcript.)
genome : 51,458,325 - 51,458,355 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217679)
HIX0217679
HIT000440382_08
(
DQ573851
)
(Non-protein coding transcript.)
genome : 51,458,326 - 51,458,355 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217679)
HIX0217679
HIT000451748_08
(
DQ585217
)
(Non-protein coding transcript.)
genome : 51,458,344 - 51,458,373 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217679)
HIX0217679
HIT000451502_12
(
DQ584971
)
(Non-protein coding transcript.)
genome : 51,458,355 - 51,458,384 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217679)
HIX0217681
HIT000459005_07
(
DQ592474
)
(Non-protein coding transcript.)
genome : 51,458,469 - 51,458,498 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217681)
HIX0217681
HIT000466330_07
(
DQ599799
)
(Non-protein coding transcript.)
genome : 51,458,469 - 51,458,498 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217681)
HIX0217681
HIT000460021_15
(
DQ593490
)
Representative transcript
(Non-protein coding transcript.)
genome : 51,458,470 - 51,458,499 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217681)
HIX0217792
HIT000451470_10
(
DQ584939
)
Representative transcript
(Non-protein coding transcript.)
genome : 51,458,610 - 51,458,640 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217792)
HIX0217680
HIT000441801_12
(
DQ575270
)
Representative transcript
(Non-protein coding transcript.)
genome : 51,458,888 - 51,458,919 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217680)
HIX0217680
HIT000441800_12
(
DQ575269
)
(Non-protein coding transcript.)
genome : 51,458,890 - 51,458,919 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217680)
HIX0167673
HIT000441203_09
(
DQ574672
)
(Non-protein coding transcript.)
genome : 51,458,938 - 51,458,968 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167673)
HIX0167673
HIT000441190_07
(
DQ574659
)
(Non-protein coding transcript.)
genome : 51,458,969 - 51,458,999 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167673)
HIX0167673
HIT000441191_07
(
DQ574660
)
Representative transcript
(Non-protein coding transcript.)
genome : 51,458,968 - 51,458,999 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167673)
HIX0167673
HIT000441189_07
(
DQ574658
)
(Non-protein coding transcript.)
genome : 51,458,969 - 51,458,999 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167673)
HIX0217799
HIT000459011_08
(
DQ592480
)
Representative transcript
(Non-protein coding transcript.)
genome : 51,460,348 - 51,460,375 (28)
query : 3 - 30 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217799)
HIX0207900
HIT000442694_08
(
DQ576163
)
Representative transcript
(Non-protein coding transcript.)
genome : 51,468,429 - 51,468,459 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207900)
HIX0168234
HIT000519988 (
ENST00000422054
)
(Immunoglobulin subtype 2 domain containing protein.)
genome : 51,667,982 - 51,668,269 (288)
query : 1 - 288 (288/288)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12, mito 7, nucl 3.5,
E.R._mito 3.5, mito_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168234)
HIX0168101
HIT000512343 (
ENST00000414409
)
(Hypothetical short protein.)
genome : 51,681,947 - 51,698,566 (16,620)
query : 1 - 588 (588/588)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168101)
HIX0217837
HIT000577643 (
ENST00000473305
)
(Hypothetical short protein.)
genome : 51,784,354 - 51,784,615 (262)
query : 1 - 262 (262/262)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217837)
HIX0168530
HIT000539229 (
ENST00000441295
)
(Hypothetical short protein.)
genome : 52,232,931 - 52,260,609 (27,679)
query : 1 - 738 (738/738)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, extr 9, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168530)
HIX0208109
HIT000616622 (
ENST00000517219
)
(Non-protein coding transcript.)
genome : 52,337,133 - 52,337,265 (133)
query : 1 - 133 (133/133)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208109)
HIX0167964
HIT000453507_11
(
DQ586976
)
Representative transcript
(Non-protein coding transcript.)
genome : 52,405,640 - 52,405,670 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167964)
HIX0006687
HIT000306962
(
CR936689
)
(Protein cordon-bleu.)
genome : 51,083,909 - 51,261,132 (177,224)
query : 1 - 4,661 (4,661/4,679)
12 exons
identity = 0.998
3'(0.999;1.000;1.000;0.998;0.990;1.000;0.993;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003124 : WH2 domain
IPR019025 : Cordon-bleu, ubiquitin-like domain
GO :
0003779 : Molecular Function : actin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16.6667, cyto 10.5,
cyto_golg 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006687)
HIX0006687
HIT000435759
(
BC150263
)
Representative transcript
(Protein cordon-bleu;)
genome : 51,083,909 - 51,384,496 (300,588)
query : 1 - 5,290 (5,290/5,307)
13 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;1.000)5'
coverage = 1.000
InterPro :
IPR003124 : WH2 domain
IPR019025 : Cordon-bleu, ubiquitin-like domain
GO :
0003779 : Molecular Function : actin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006687)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY308745
Danio
sp. (Zebrafish) : BC090747
Bos
sp. (Cow) : BC126668
Gallus
sp. (Chicken) : BX935532
Pongo
sp. (Orangutan) : ENSPPYT00000020452
Rattus
sp. (Rat) : XM_001053778
Macaca
sp. (Macaque) : XM_001082572
Monodelphis
sp. (Opossum) : XM_001379524
Equus
sp. (Horse) : XM_001497071
Pan
sp. (Chimpanzee) : XM_519099
Canis
sp. (Dog) : XM_844721
HIX0006687
HIT000205349 (
NM_015198
)
(Protein cordon-bleu;)
genome : 51,083,909 - 51,384,515 (300,607)
query : 1 - 5,310 (5,310/5,326)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006687)
HIX0006687
HIT000098195
(
BC045771
)
(Protein cordon-bleu.)
genome : 51,083,909 - 51,258,640 (174,732)
query : 1 - 4,781 (4,781/4,797)
12 exons
identity = 0.999
3'(0.998;0.996;1.000;0.998;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003124 : WH2 domain
IPR019025 : Cordon-bleu, ubiquitin-like domain
GO :
0003779 : Molecular Function : actin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006687)
HIX0006687
HIT000109580 (
ENST00000265136
)
(Protein cordon-bleu;)
genome : 51,083,909 - 51,384,496 (300,588)
query : 1 - 5,291 (5,291/5,291)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006687)
HIX0006687
HIT000542988 (
ENST00000445054
)
(Protein cordon-bleu.)
genome : 51,083,909 - 51,261,132 (177,224)
query : 1 - 4,660 (4,660/4,660)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 16.1667, cyto 10.5,
cyto_golg 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006687)
HIX0006687
HIT000529882 (
ENST00000431948
)
(Protein cordon-bleu.)
genome : 51,083,909 - 51,258,640 (174,732)
query : 1 - 4,780 (4,780/4,780)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16.5, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006687)
HIX0006687
HIT000478912 (
ENST00000395542
)
(Protein cordon-bleu.)
genome : 51,083,910 - 51,384,515 (300,606)
query : 1 - 5,555 (5,555/5,555)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006687)
HIX0006687
HIT000000358
(
AB014533
)
(Protein cordon-bleu;)
genome : 51,083,910 - 51,384,496 (300,587)
query : 1 - 5,289 (5,289/5,289)
13 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006687)
HIX0006687
HIT000091709
(
BC029275
)
(Protein cordon-bleu.)
genome : 51,084,751 - 51,153,003 (68,253)
query : 15 - 3,199 (3,185/3,213)
7 exons
identity = 0.997
3'(0.998;1.000;1.000;0.998;0.969;1.000;1.000)5'
coverage = 0.996
InterPro :
IPR003124 : WH2 domain
GO :
0003779 : Molecular Function : actin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15.6667, cyto 9, cyto_golg 6.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006687)
HIX0006687
HIT000500460
(
BC136441
)
(Protein cordon-bleu.)
genome : 51,085,033 - 51,384,430 (299,398)
query : 1 - 4,132 (4,132/4,132)
14 exons
identity = 0.999
3'(0.996;1.000;1.000;0.999;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.995;1.000)5'
coverage = 1.000
InterPro :
IPR003124 : WH2 domain
IPR019025 : Cordon-bleu, ubiquitin-like domain
GO :
0003779 : Molecular Function : actin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006687)
HIX0006687
HIT000502529
(
BC144099
)
(Protein cordon-bleu.)
genome : 51,085,033 - 51,384,430 (299,398)
query : 1 - 3,960 (3,960/3,960)
13 exons
identity = 0.999
3'(1.000;1.000;0.992;0.998;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;1.000)5'
coverage = 1.000
InterPro :
IPR003124 : WH2 domain
IPR019025 : Cordon-bleu, ubiquitin-like domain
GO :
0003779 : Molecular Function : actin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006687)
HIX0006687
HIT000488507
(
AK293883
)
(Protein cordon-bleu.)
genome : 51,095,526 - 51,111,207 (15,682)
query : 1 - 1,832 (1,832/1,832)
4 exons
identity = 0.998
3'(0.998;0.997;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006687)
HIX0006687
HIT000550468 (
ENST00000452534
)
(Protein cordon-bleu.)
genome : 51,096,877 - 51,261,286 (164,410)
query : 1 - 1,842 (1,842/1,842)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006687)
AC004830.1
51000001-51027779 F +
NCBI
AC004414.1
51027780-51142624 F +
NCBI
AC012372.4
51142625-51233997 F +
NCBI
AC005535.2
51233998-51391610 F +
NCBI
AC012441.3
51391611-51461594 F +
NCBI
AC073193.10
51461595-51582030 F +
NCBI
AC092441.4
51582031-51628251 F +
NCBI
AC005999.2
51628252-51763778 F +
NCBI
AC018701.3
51763779-51779081 F +
NCBI
AC006478.2
51779082-51951066 F +
NCBI
AC022458.3
51951067-51971336 F +
NCBI
AC009415.2
51971337-52151483 F +
NCBI
AC082648.6
52151484-52151726 F +
NCBI
AC079763.7
52151727-52307574 F +
NCBI
AC006320.4
52307575-52402167 F -
NCBI
AC006459.3
52402168-52588948 F -
NCBI
AC011283.3
52588949-52600000 F -
NCBI