bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0006697
HIT000106679 (
ENST00000254770
)
(LanC-like protein 2; Testis-specific adriamycin sensitivity protein;)
genome : 55,433,141 - 55,501,435 (68,295)
query : 1 - 4,353 (4,353/4,353)
9 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16.5, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006697)
HIX0006697
HIT000207394 (
NM_018697
)
(LanC-like protein 2; Testis-specific adriamycin sensitivity protein;)
genome : 55,433,141 - 55,501,435 (68,295)
query : 1 - 4,353 (4,353/4,353)
9 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16.5, nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006697)
HIX0006697
HIT000264007
(
BC070049
)
(LanC-like protein 2; Testis-specific adriamycin sensitivity protein;)
genome : 55,433,449 - 55,501,426 (67,978)
query : 5 - 4,040 (4,036/4,054)
9 exons
identity = 0.998
5'(0.998)3'
coverage = 0.999
InterPro :
IPR007822 : Lanthionine synthetase C-like
IPR012341 : Six-hairpin glycosidase
IPR020464 : LanC-like protein, eukaryotic
GO :
0003824 : Molecular Function : catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16.5, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006697)
HIX0006697
HIT000246431
(
AJ278245
)
Representative transcript
(LanC-like protein 2; Testis-specific adriamycin sensitivity protein;)
genome : 55,433,533 - 55,501,434 (67,902)
query : 1 - 3,960 (3,960/3,972)
9 exons
identity = 0.998
5'(0.997)3'
coverage = 1.000
InterPro :
IPR007822 : Lanthionine synthetase C-like
IPR012341 : Six-hairpin glycosidase
IPR020464 : LanC-like protein, eukaryotic
GO :
0003824 : Molecular Function : catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16.5, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006697)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168609
Mus
sp. (Mouse) : BC016072
Danio
sp. (Zebrafish) : BC061705
Rattus
sp. (Rat) : BC079412
Bos
sp. (Cow) : BC149311
Tetraodon
sp. (Tetraodon) : CR699200
Pongo
sp. (Orangutan) : ENSPPYT00000021295
Takifugu
sp. (Fugu) : SINFRUT00000134515
Monodelphis
sp. (Opossum) : XM_001379277
Equus
sp. (Horse) : XM_001497780
Canis
sp. (Dog) : XM_540359
Pan
sp. (Chimpanzee) : XR_025616
HIX0006698
HIT000567170 (
ENST00000462326
)
(Vesicular, overexpressed in cancer, prosurvival protein 1; EGFR-coamplified and overexpressed protein; ECop; Precursor;)
genome : 55,503,749 - 55,640,106 (136,358)
query : 1 - 536 (536/536)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 5, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0025381
HIT000045452
(
AK125579
)
Representative transcript
(Conserved hypothetical protein.)
genome : 55,505,604 - 55,507,435 (1,832)
query : 1 - 1,832 (1,832/1,832)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23, nucl 5, plas 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025381)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000021296
Pan
sp. (Chimpanzee) : ENSPTRT00000055478
HIX0025423
HIT000048228
(
AK128355
)
Representative transcript
(Conserved hypothetical protein.)
genome : 55,507,458 - 55,510,345 (2,888)
query : 1 - 2,888 (2,888/2,888)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 11, cyto_nucl 10, cyto 7, extr_plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025423)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000021297
Pan
sp. (Chimpanzee) : XM_001157430
HIX0022227
HIT000023255
(
AK098425
)
Representative transcript
(Retrovirus-related Pol polyprotein LINE-1; Long interspersed element-1; L1; Includes: Reverse transcriptase; EC=2.7.7.49; Includes: Endonuclease;)
genome : 55,521,259 - 55,523,153 (1,895)
query : 1 - 1,895 (1,895/1,895)
1 exon
identity = 0.986
5'(0.986)3'
coverage = 1.000
EC number :
EC 2.7.7.49
InterPro :
IPR000477 : Reverse transcriptase domain
GO :
0003723 : Molecular Function : RNA binding
0003964 : Molecular Function : RNA-directed DNA polymerase activity
0006278 : Biological Process : RNA-dependent DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.6667, cyto_plas 11, nucl 7,
extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022227)
HIX0006698
HIT000025206
(
AL136610
)
(Vesicular, overexpressed in cancer, prosurvival protein 1; EGFR-coamplified and overexpressed protein; ECop; Glioblastoma-amplified secreted protein; Putative NF-kappa-B-activating protein 055N; Precursor;)
genome : 55,538,306 - 55,640,023 (101,718)
query : 4 - 2,770 (2,767/2,789)
5 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR026229 : Vesicular, overexpressed in cancer, prosurvival protein 1
GO :
0030659 : Cellular Component : cytoplasmic vesicle membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 4, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000209950 (
NM_030796
)
(Vesicular, overexpressed in cancer, prosurvival protein 1; EGFR-coamplified and overexpressed protein; ECop; Glioblastoma-amplified secreted protein; Putative NF-kappa-B-activating protein 055N; Precursor;)
genome : 55,538,306 - 55,640,200 (101,895)
query : 1 - 2,944 (2,944/2,962)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 4, lyso 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000003014
(
AK000539
)
(Hypothetical short protein.)
genome : 55,538,306 - 55,539,422 (1,117)
query : 1 - 1,117 (1,117/1,135)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 6.5, cyto_nucl 5.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000037614
(
BC016650
)
(Vesicular, overexpressed in cancer, prosurvival protein 1; EGFR-coamplified and overexpressed protein; ECop; Glioblastoma-amplified secreted protein; Putative NF-kappa-B-activating protein 055N; Precursor;)
genome : 55,538,306 - 55,640,105 (101,800)
query : 1 - 2,848 (2,848/2,862)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.993)5'
coverage = 1.000
InterPro :
IPR026229 : Vesicular, overexpressed in cancer, prosurvival protein 1
GO :
0030659 : Cellular Component : cytoplasmic vesicle membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 4, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000112595_01 (
ENST00000285279
)
(Vesicular, overexpressed in cancer, prosurvival protein 1; EGFR-coamplified and overexpressed protein; ECop; Glioblastoma-amplified secreted protein; Putative NF-kappa-B-activating protein 055N; Precursor;)
genome : 55,538,306 - 55,640,218 (101,913)
query : 1 - 2,962 (2,962/2,962)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 4, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000082426
(
AK075391
)
Representative transcript
(Vesicular, overexpressed in cancer, prosurvival protein 1; EGFR-coamplified and overexpressed protein; ECop; Glioblastoma-amplified secreted protein; Putative NF-kappa-B-activating protein 055N; Precursor;)
genome : 55,538,307 - 55,640,147 (101,841)
query : 1 - 2,890 (2,890/2,890)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026229 : Vesicular, overexpressed in cancer, prosurvival protein 1
GO :
0030659 : Cellular Component : cytoplasmic vesicle membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 4, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK158041
Bos
sp. (Cow) : BC149078
Gallus
sp. (Chicken) : CR407361
Pongo
sp. (Orangutan) : CR857945
Rattus
sp. (Rat) : XM_001064110
Macaca
sp. (Macaque) : XM_001106718
Pan
sp. (Chimpanzee) : XM_001157372
Monodelphis
sp. (Opossum) : XM_001379250
Equus
sp. (Horse) : XM_001497828
Canis
sp. (Dog) : XM_845618
HIX0006698
HIT000242141
(
AB097004
)
(Vesicular, overexpressed in cancer, prosurvival protein 1; EGFR-coamplified and overexpressed protein; ECop; Glioblastoma-amplified secreted protein; Putative NF-kappa-B-activating protein 055N; Precursor;)
genome : 55,538,307 - 55,640,072 (101,766)
query : 1 - 2,815 (2,815/2,815)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026229 : Vesicular, overexpressed in cancer, prosurvival protein 1
GO :
0030659 : Cellular Component : cytoplasmic vesicle membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 4, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000015692
(
AK090825
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,538,307 - 55,639,561 (101,255)
query : 1 - 2,866 (2,866/2,866)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 6, mito 5, nucl 3, E.R._mito 3,
mito_pero 3, cyto_plas 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000526582 (
ENST00000428648
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,538,307 - 55,639,561 (101,255)
query : 1 - 2,866 (2,866/2,866)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 6, mito 5, nucl 3, E.R._mito 3,
mito_pero 3, cyto_plas 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000644435_02 (
ENST00000545390
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,538,307 - 55,606,350 (68,044)
query : 1 - 2,751 (2,751/2,751)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, cyto 3, nucl 2, cyto_mito 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000017859
(
AK092992
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,538,307 - 55,605,387 (67,081)
query : 1 - 2,899 (2,899/2,899)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR026229 : Vesicular, overexpressed in cancer, prosurvival protein 1
GO :
0030659 : Cellular Component : cytoplasmic vesicle membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, plas 12, extr_plas 9.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000531893 (
ENST00000433959
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,538,307 - 55,605,387 (67,081)
query : 1 - 2,900 (2,900/2,900)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, plas 12, extr_plas 9.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000078936
(
AF395824
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,538,307 - 55,588,837 (50,531)
query : 3 - 2,721 (2,719/2,721)
4 exons
identity = 0.998
3'(1.000;1.000;1.000;0.945)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 6, mito 5, nucl 3, E.R._mito 3,
mito_pero 3, cyto_plas 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000046721
(
AK126848
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,538,307 - 55,541,563 (3,257)
query : 1 - 3,257 (3,257/3,257)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000526031 (
ENST00000428097
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,539,630 - 55,594,715 (55,086)
query : 1 - 1,671 (1,671/1,671)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 6, mito 5, nucl 3, E.R._mito 3,
mito_pero 3, cyto_plas 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000434748
(
AK315882
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,539,661 - 55,606,353 (66,693)
query : 1 - 1,400 (1,400/1,400)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026229 : Vesicular, overexpressed in cancer, prosurvival protein 1
GO :
0030659 : Cellular Component : cytoplasmic vesicle membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, cyto 3, nucl 2, cyto_mito 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000516838 (
ENST00000418904
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,539,896 - 55,620,545 (80,650)
query : 1 - 1,317 (1,317/1,317)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, extr 4, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000428154
(
AK309288
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,539,896 - 55,620,466 (80,571)
query : 1 - 1,238 (1,238/1,238)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026229 : Vesicular, overexpressed in cancer, prosurvival protein 1
GO :
0030659 : Cellular Component : cytoplasmic vesicle membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, extr 4, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000552161 (
ENST00000454227
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,540,402 - 55,621,580 (81,179)
query : 1 - 610 (610/610)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000268331
(
CR533483
)
(Vesicular, overexpressed in cancer, prosurvival protein 1; EGFR-coamplified and overexpressed protein; ECop; Glioblastoma-amplified secreted protein; Putative NF-kappa-B-activating protein 055N; Precursor;)
genome : 55,540,438 - 55,640,017 (99,580)
query : 1 - 629 (629/629)
5 exons
identity = 0.995
3'(0.993;0.993;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026229 : Vesicular, overexpressed in cancer, prosurvival protein 1
GO :
0030659 : Cellular Component : cytoplasmic vesicle membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 4, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000551190 (
ENST00000453256
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,540,447 - 55,583,770 (43,324)
query : 1 - 649 (649/649)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 6, mito 5, nucl 3, E.R._mito 3,
mito_pero 3, cyto_plas 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000525634 (
ENST00000427700
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,540,470 - 55,629,746 (89,277)
query : 16 - 632 (617/632)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.976
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, mito 5, cyto 4, E.R. 4, extr 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000384885
(
AK225755
)
(Vesicular, overexpressed in cancer, prosurvival protein 1; EGFR-coamplified and overexpressed protein; ECop; Glioblastoma-amplified secreted protein; Putative NF-kappa-B-activating protein 055N; Precursor;)
genome : 55,540,482 - 55,640,153 (99,672)
query : 6 - 726 (721/726)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.993
InterPro :
IPR026229 : Vesicular, overexpressed in cancer, prosurvival protein 1
GO :
0030659 : Cellular Component : cytoplasmic vesicle membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 4, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000644983_02 (
ENST00000545938
)
(Vesicular, overexpressed in cancer, prosurvival protein 1; EGFR-coamplified and overexpressed protein; ECop; Glioblastoma-amplified secreted protein; Putative NF-kappa-B-activating protein 055N; Precursor;)
genome : 55,540,529 - 55,640,178 (99,650)
query : 6 - 704 (699/704)
5 exons
identity = 0.993
3'(0.995;1.000;0.987;1.000;0.986)5'
coverage = 0.993
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 4, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000691036_02 (
ENST00000579101
)
(Vesicular, overexpressed in cancer, prosurvival protein 1; EGFR-coamplified and overexpressed protein; ECop; Glioblastoma-amplified secreted protein; Putative NF-kappa-B-activating protein 055N; Precursor;)
genome : 55,540,529 - 55,640,178 (99,650)
query : 6 - 704 (699/704)
5 exons
identity = 0.993
3'(0.995;1.000;0.987;1.000;0.986)5'
coverage = 0.993
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 4, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000433204
(
AK314338
)
(Vesicular, overexpressed in cancer, prosurvival protein 1; EGFR-coamplified and overexpressed protein; ECop; Glioblastoma-amplified secreted protein; Putative NF-kappa-B-activating protein 055N; Precursor;)
genome : 55,540,548 - 55,640,106 (99,559)
query : 1 - 608 (608/608)
5 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026229 : Vesicular, overexpressed in cancer, prosurvival protein 1
GO :
0030659 : Cellular Component : cytoplasmic vesicle membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 4, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000694215_02 (
ENST00000582321
)
(Vesicular, overexpressed in cancer, prosurvival protein 1; EGFR-coamplified and overexpressed protein; ECop; Glioblastoma-amplified secreted protein; Putative NF-kappa-B-activating protein 055N; Precursor;)
genome : 55,540,548 - 55,640,017 (99,470)
query : 1 - 519 (519/519)
5 exons
identity = 0.996
3'(0.995;1.000;0.987;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 4, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000552957 (
ENST00000455023
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,540,578 - 55,607,320 (66,743)
query : 1 - 574 (574/574)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 4, mito 4, cyto_mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000512047 (
ENST00000414113
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,540,610 - 55,605,387 (64,778)
query : 1 - 539 (539/539)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 5, cyto_nucl 4.83333, cyto_pero 4.33333,
mito 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000515333 (
ENST00000417399
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,540,708 - 55,589,559 (48,852)
query : 1 - 591 (591/591)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 5.5, mito 5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0188540
pHIT000013028 ( pHIT000013028 )
Representative transcript
(Hypothetical protein.)
genome : 55,543,081 - 55,554,825 (11,745)
query : 1 - 708 (708/708)
5 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188540)
CAGE tag :
H05BC69B0610
HIX0025353
HIT000044049
(
AK124176
)
Representative transcript
(Conserved hypothetical protein.)
genome : 55,551,473 - 55,553,950 (2,478)
query : 1 - 2,475 (2,475/2,475)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 6, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025353)
HIX0006698
HIT000585177 (
ENST00000481197
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,559,956 - 55,589,563 (29,608)
query : 1 - 583 (583/583)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto 4, mito_pero 2.5, cyto_plas 2.5, pero 2,
lyso 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000550766 (
ENST00000452832
)
(Vesicular, overexpressed in cancer, prosurvival protein 1; EGFR-coamplified and overexpressed protein; ECop; Precursor;)
genome : 55,560,037 - 55,640,153 (80,117)
query : 1 - 485 (485/485)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, extr 1, nucl 1, cyto 1, mito 1, cyto_nucl 1,
golg 1, cyto_mito 1, cyto_golg 1, mito_nucl 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000551046 (
ENST00000453112
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,560,079 - 55,640,147 (80,069)
query : 1 - 552 (552/552)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_mito 7.83333, mito 7.5, cyto 7,
cyto_pero 4.33333, mito_nucl 4.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006698
HIT000575609 (
ENST00000471168
)
(Vesicular, overexpressed in cancer, prosurvival protein 1 precursor.)
genome : 55,560,533 - 55,640,681 (80,149)
query : 1 - 582 (582/582)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto_nucl 8.5, cyto 7.5, nucl 7,
cyto_pero 6.66667, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006698)
HIX0006699
HIT000007156
(
AK023882
)
Representative transcript
(Conserved hypothetical protein.)
genome : 55,584,657 - 55,587,883 (3,227)
query : 1 - 3,227 (3,227/3,227)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 7, nucl 6.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006699)
HIX0168721
HIT000552711 (
ENST00000454777
)
(Hypothetical short protein.)
genome : 55,640,864 - 55,656,029 (15,166)
query : 1 - 552 (552/552)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9.5, extr_plas 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168721)
HIX0168224
HIT000519434 (
ENST00000421500
)
(Hypothetical short protein.)
genome : 55,659,767 - 55,660,886 (1,120)
query : 1 - 939 (939/939)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, nucl 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168224)
HIX0168657
HIT000547833 (
ENST00000449899
)
(Hypothetical short protein.)
genome : 55,661,470 - 55,662,699 (1,230)
query : 1 - 543 (543/543)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 9.5, extr_plas 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168657)
HIX0168633
HIT000546500 (
ENST00000448566
)
(Small GTPase superfamily protein.)
genome : 55,705,967 - 55,706,535 (569)
query : 1 - 569 (569/569)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 10, extr 9, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168633)
HIX0124491
HIT000514453 (
ENST00000416519
)
(Beta tubulin family protein.)
genome : 55,713,313 - 55,714,644 (1,332)
query : 1 - 1,332 (1,332/1,332)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11.5, cyto_nucl 9, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0124491)
HIX0168365
HIT000530169 (
ENST00000432235
)
(Conserved hypothetical protein.)
genome : 55,724,461 - 55,746,183 (21,723)
query : 1 - 1,948 (1,948/1,948)
6 exons
identity = 0.989
3'(1.000;0.965;0.982;0.997;0.957;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 12.5, mito 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168365)
HIX0006586
HIT000035506
(
BC011872
)
Representative transcript
(Peptidyl-prolyl cis-trans isomerase FKBP9; PPIase FKBP9; EC=5.2.1.8; 63 kDa FK506-binding protein; 63 kDa FKBP; FKBP-63; FK506-binding protein 9; FKBP-9; FKBP65RS; Rotamase; Precursor;)
genome : 55,748,767 - 55,756,994 (8,228)
query : 1 - 2,452 (2,452/2,508)
4 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
InterPro :
IPR001179 : Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
IPR023566 : Peptidyl-prolyl cis-trans isomerase, FKBP-type
GO :
0005509 : Molecular Function : calcium ion binding
0006457 : Biological Process : protein folding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 4, plas 3, cyto_nucl 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006586)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AB008675
Mus
sp. (Mouse) : BC043129
Rattus
sp. (Rat) : BC081961
Bos
sp. (Cow) : BC105407
Canis
sp. (Dog) : ENSCAFT00000005070
Pongo
sp. (Orangutan) : ENSPPYT00000020569
Takifugu
sp. (Fugu) : SINFRUT00000163781
Pan
sp. (Chimpanzee) : XM_001167007
HIX0006586
HIT000486445 (
NR_003949
)
(Peptidyl-prolyl cis-trans isomerase FKBP9 precursor.)
genome : 55,748,767 - 55,772,260 (23,494)
query : 1 - 2,437 (2,437/2,457)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.5, nucl 3.5, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006586)
HIX0006586
HIT000563428 (
NR_027339
)
(Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain containing protein.)
genome : 55,748,767 - 55,757,153 (8,387)
query : 1 - 2,541 (2,541/2,561)
4 exons
identity = 0.997
3'(1.000;1.000;1.000;0.986)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, cyto 9, pero 8, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006586)
HIX0006586
HIT000563431 (
NR_027342
)
(Peptidyl-prolyl cis-trans isomerase FKBP9; PPIase FKBP9; EC=5.2.1.8; 63 kDa FK506-binding protein; 63 kDa FKBP; FKBP-63; FK506-binding protein 9; FKBP-9; FKBP65RS; Rotamase; Precursor;)
genome : 55,748,767 - 55,756,994 (8,228)
query : 1 - 2,451 (2,451/2,471)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 4, plas 3, cyto_nucl 3, cyto_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006586)
HIX0006586
HIT000563429 (
NR_027340
)
(Peptidyl-prolyl cis-trans isomerase FKBP10; PPIase FKBP10; EC=5.2.1.8; 65 kDa FK506-binding protein; 65 kDa FKBP; FKBP-65; FK506-binding protein 10; FKBP-10; Immunophilin FKBP65; Rotamase; Precursor;)
genome : 55,748,767 - 55,755,725 (6,959)
query : 1 - 2,170 (2,170/2,190)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_mito 8.16667, cyto 8, mito_pero 7.66667,
E.R._mito 7.5, mito 7, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006586)
HIX0006586
HIT000553843 (
ENST00000455909
)
(Peptidyl-prolyl cis-trans isomerase FKBP10; PPIase FKBP10; EC=5.2.1.8; 65 kDa FK506-binding protein; 65 kDa FKBP; FKBP-65; FK506-binding protein 10; FKBP-10; Immunophilin FKBP65; Rotamase; Precursor;)
genome : 55,748,767 - 55,756,994 (8,228)
query : 1 - 2,451 (2,451/2,451)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 4, plas 3, cyto_nucl 3, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006586)
HIX0006586
HIT000123779 (
ENST00000324256
)
(Peptidyl-prolyl cis-trans isomerase FKBP10; PPIase FKBP10; EC=5.2.1.8; 65 kDa FK506-binding protein; 65 kDa FKBP; FKBP-65; FK506-binding protein 10; FKBP-10; Immunophilin FKBP65; Rotamase; Precursor;)
genome : 55,750,321 - 55,755,681 (5,361)
query : 1 - 572 (572/572)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_mito 8.16667, cyto 8, mito_pero 7.66667,
E.R._mito 7.5, mito 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006586)
HIX0006586
HIT000422235
(
AK289438
)
(Peptidyl-prolyl cis-trans isomerase FKBP10; PPIase FKBP10; EC=5.2.1.8; 65 kDa FK506-binding protein; 65 kDa FKBP; FKBP-65; FK506-binding protein 10; FKBP-10; Immunophilin FKBP65; Rotamase; Precursor;)
genome : 55,750,321 - 55,755,681 (5,361)
query : 1 - 572 (572/572)
3 exons
identity = 0.998
3'(0.995;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
InterPro :
IPR001179 : Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
IPR023566 : Peptidyl-prolyl cis-trans isomerase, FKBP-type
GO :
0005509 : Molecular Function : calcium ion binding
0006457 : Biological Process : protein folding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_mito 8.16667, cyto 8, mito_pero 7.66667,
E.R._mito 7.5, mito 7, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006586)
HIX0006586
HIT000431847
(
AK312981
)
(Peptidyl-prolyl cis-trans isomerase FKBP9; PPIase FKBP9; EC=5.2.1.8; 63 kDa FK506-binding protein; 63 kDa FKBP; FKBP-63; FK506-binding protein 9; FKBP-9; FKBP65RS; Rotamase; Precursor;)
genome : 55,750,342 - 55,755,725 (5,384)
query : 1 - 595 (595/595)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
InterPro :
IPR001179 : Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
IPR023566 : Peptidyl-prolyl cis-trans isomerase, FKBP-type
GO :
0005509 : Molecular Function : calcium ion binding
0006457 : Biological Process : protein folding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_mito 8.16667, cyto 8, mito_pero 7.66667,
E.R._mito 7.5, mito 7, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006586)
HIX0006586
HIT000539633 (
ENST00000441699
)
(Peptidyl-prolyl cis-trans isomerase FKBP9 precursor.)
genome : 55,750,345 - 55,780,945 (30,601)
query : 1 - 1,491 (1,491/1,491)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, E.R._mito 5.33333, mito 4.5, extr 4,
mito_pero 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006586)
HIX0187507
HIT000536245 (
ENST00000438311
)
(Small ubiquitin-related modifier, chordates family protein.)
genome : 55,799,837 - 55,800,124 (288)
query : 1 - 288 (288/288)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13.5, extr 5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0187507)
HIX0187507
pHIT000013034 ( pHIT000013034 )
Representative transcript
(Conserved hypothetical protein.)
genome : 55,799,837 - 55,800,124 (288)
query : 1 - 288 (288/288)
1 exon
InterPro :
IPR000626 : Ubiquitin-like
IPR022617 : Rad60/SUMO-like domain
IPR027218 : Small ubiquitin-related modifier, chordates
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0016925 : Biological Process : protein sumoylation
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0187507)
CAGE tag :
H39BB09I2004
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC075956
HIX0168410
HIT000532679 (
ENST00000434745
)
(Conserved hypothetical protein.)
genome : 55,804,472 - 55,807,289 (2,818)
query : 1 - 2,818 (2,818/2,818)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 11.5, cyto_nucl 9, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168410)
HIX0167910
HIT000441174_12
(
DQ574643
)
Representative transcript
(Non-protein coding transcript.)
genome : 55,811,965 - 55,811,996 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167910)
HIX0167926
HIT000442387_12
(
DQ575856
)
Representative transcript
(Non-protein coding transcript.)
genome : 55,812,522 - 55,812,552 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167926)
HIX0167979
HIT000457489_10
(
DQ590958
)
Representative transcript
(Non-protein coding transcript.)
genome : 55,812,991 - 55,813,021 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167979)
HIX0167974
HIT000454770_08
(
DQ588239
)
Representative transcript
(Non-protein coding transcript.)
genome : 55,813,294 - 55,813,324 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167974)
HIX0167904
HIT000439481_07
(
DQ572950
)
Representative transcript
(Non-protein coding transcript.)
genome : 55,813,458 - 55,813,486 (29)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167904)
HIX0167674
HIT000440383_09
(
DQ573852
)
Representative transcript
(Non-protein coding transcript.)
genome : 55,813,650 - 55,813,680 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167674)
HIX0167674
HIT000440382_09
(
DQ573851
)
(Non-protein coding transcript.)
genome : 55,813,651 - 55,813,680 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167674)
HIX0167674
HIT000451748_09
(
DQ585217
)
(Non-protein coding transcript.)
genome : 55,813,669 - 55,813,698 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167674)
HIX0167674
HIT000451502_13
(
DQ584971
)
(Non-protein coding transcript.)
genome : 55,813,680 - 55,813,709 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167674)
HIX0207819
HIT000459005_08
(
DQ592474
)
(Non-protein coding transcript.)
genome : 55,813,794 - 55,813,823 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207819)
HIX0207819
HIT000466330_08
(
DQ599799
)
Representative transcript
(Non-protein coding transcript.)
genome : 55,813,794 - 55,813,823 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207819)
HIX0167678
HIT000441801_13
(
DQ575270
)
Representative transcript
(Non-protein coding transcript.)
genome : 55,814,214 - 55,814,245 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167678)
HIX0167678
HIT000441800_13
(
DQ575269
)
(Non-protein coding transcript.)
genome : 55,814,216 - 55,814,245 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167678)
HIX0167919
HIT000441203_10
(
DQ574672
)
(Non-protein coding transcript.)
genome : 55,814,264 - 55,814,294 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167919)
HIX0167919
HIT000441190_08
(
DQ574659
)
(Non-protein coding transcript.)
genome : 55,814,295 - 55,814,325 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167919)
HIX0167919
HIT000441191_08
(
DQ574660
)
Representative transcript
(Non-protein coding transcript.)
genome : 55,814,294 - 55,814,325 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167919)
HIX0167919
HIT000441189_08
(
DQ574658
)
(Non-protein coding transcript.)
genome : 55,814,295 - 55,814,325 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167919)
HIX0167985
HIT000459011_09
(
DQ592480
)
Representative transcript
(Non-protein coding transcript.)
genome : 55,815,674 - 55,815,701 (28)
query : 3 - 30 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167985)
HIX0167916
HIT000441201_05
(
DQ574670
)
Representative transcript
(Non-protein coding transcript.)
genome : 55,815,703 - 55,815,734 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167916)
HIX0167917
HIT000711522_04 (
ENST00000599771
)
(Hypothetical protein.)
genome : 55,818,315 - 56,446,381 (628,067)
query : 1 - 459 (459/459)
3 exons
identity = 0.959
3'(0.952;0.962;0.967)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 10.5, mito 8, cyto 5, extr 4,
E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167917)
HIX0207901
HIT000442694_09
(
DQ576163
)
Representative transcript
(Non-protein coding transcript.)
genome : 55,824,010 - 55,824,040 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207901)
HIX0034212
HIT000547996 (
ENST00000450062
)
(HAD-like domain containing protein.)
genome : 55,832,490 - 55,840,981 (8,492)
query : 1 - 261 (261/261)
2 exons
identity = 0.985
5'(0.994;0.972)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13.5, nucl 5.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034212)
HIX0034212
HIT000217148
(
S82076
)
Representative transcript
(Non-protein coding transcript.)
genome : 55,840,921 - 55,841,197 (277)
query : 1 - 278 (278/292)
1 exon
identity = 0.968
5'(0.968)3'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034212)
HIX0025388
HIT000320370 (
NM_207366
)
(Septin-14;)
genome : 55,861,237 - 55,930,482 (69,246)
query : 1 - 3,785 (3,785/3,785)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14.5, nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025388)
HIX0025388
HIT000395885 (
ENST00000388975
)
(Septin-14;)
genome : 55,861,237 - 55,930,482 (69,246)
query : 1 - 3,785 (3,785/3,785)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025388)
HIX0025388
HIT000045921
(
AK126048
)
(Septin-14.)
genome : 55,861,237 - 55,902,242 (41,006)
query : 1 - 3,073 (3,073/3,073)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15.5, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025388)
HIX0025388
HIT000496552
(
AK301928
)
Representative transcript
(Septin-14;)
genome : 55,863,178 - 55,930,445 (67,268)
query : 1 - 1,807 (1,807/1,807)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025388)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK006043
Danio
sp. (Zebrafish) : BC115182
Bos
sp. (Cow) : BC149885
Gallus
sp. (Chicken) : CR386973
Canis
sp. (Dog) : ENSCAFT00000009887
Oryzias
sp. (Medaka) : ENSORLT00000019935
Pongo
sp. (Orangutan) : ENSPPYT00000020444
Tetraodon
sp. (Tetraodon) : GSTENT00033754001
Rattus
sp. (Rat) : XM_001069593
Monodelphis
sp. (Opossum) : XM_001373062
Equus
sp. (Horse) : XM_001493123
Pan
sp. (Chimpanzee) : XM_519103
Macaca
sp. (Macaque) : XR_013223
HIX0025388
HIT000628428_11 (
ENST00000529266
)
(Septin-14;)
genome : 55,863,638 - 56,432,622 (568,985)
query : 1 - 355 (355/355)
2 exons
identity = 0.983
3'(0.993;0.976)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 4.5, cyto_nucl 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025388)
HIX0168763
HIT000555145 (
ENST00000457211
)
(Conserved hypothetical protein.)
genome : 55,865,639 - 55,866,173 (535)
query : 1 - 535 (535/535)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 11, cyto_nucl 9.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168763)
HIX0168741
HIT000553735 (
ENST00000455801
)
(Conserved hypothetical protein.)
genome : 55,865,727 - 55,866,569 (843)
query : 1 - 843 (843/843)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 5, cyto 5, cyto_nucl 5, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168741)
HIX0168555
HIT000540978 (
ENST00000443044
)
(Cell division protein borealin family protein.)
genome : 55,878,472 - 55,879,104 (633)
query : 1 - 633 (633/633)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, plas 9, cyto_mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168555)
HIX0025388
HIT000581765 (
ENST00000477628
)
(Septin-14.)
genome : 55,912,230 - 55,930,448 (18,219)
query : 1 - 560 (560/560)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, extr 7, nucl 4.5, pero 2,
golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025388)
HIX0168209
HIT000518588 (
ENST00000420654
)
(Small GTPase superfamily protein.)
genome : 55,944,431 - 55,944,717 (287)
query : 1 - 287 (287/287)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9.5, extr_plas 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168209)
HIX0168700
HIT000550932 (
ENST00000452998
)
(Small GTPase superfamily protein.)
genome : 55,945,605 - 55,945,857 (253)
query : 1 - 253 (253/253)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168700)
HIX0217546
HIT000335097
(
BC094796
)
Representative transcript
(Zinc finger protein 287.)
genome : 55,955,149 - 56,009,466 (54,318)
query : 1 - 2,607 (2,607/2,622)
8 exons
identity = 0.996
5'(0.996;1.000;0.996;1.000;1.000;1.000;0.997;
0.985)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217546)
HIX0217546
HIT000098879
(
BC048108
)
(KRAB domain-containing protein 4; KRAB box domain-containing protein 4;)
genome : 55,955,169 - 55,992,567 (37,399)
query : 1 - 2,581 (2,581/2,595)
5 exons
identity = 0.995
5'(0.961;1.000;0.998;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, cyto 10.5, cyto_nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217546)
HIX0217546
HIT000571273 (
ENST00000466630
)
(Krueppel-associated box domain containing protein.)
genome : 55,955,169 - 55,992,571 (37,403)
query : 1 - 2,591 (2,591/2,591)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, cyto 10.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217546)
HIX0217546
HIT000509797 (
ENST00000411863
)
(Conserved hypothetical protein.)
genome : 55,955,205 - 55,991,046 (35,842)
query : 1 - 1,286 (1,286/1,286)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 11, cyto 10.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217546)
HIX0217546
HIT000587983 (
ENST00000484120
)
(Hypothetical short protein.)
genome : 55,973,882 - 55,979,606 (5,725)
query : 1 - 489 (489/489)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 10, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217546)
HIX0217546
HIT000586366 (
ENST00000482436
)
(Krueppel-associated box domain containing protein.)
genome : 55,979,685 - 55,992,035 (12,351)
query : 1 - 537 (537/537)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217546)
HIX0217546
HIT000527525 (
ENST00000429591
)
(Krueppel-associated box domain containing protein.)
genome : 55,980,331 - 56,009,918 (29,588)
query : 1 - 3,550 (3,550/3,550)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217546)
HIX0217546
HIT000022137
(
AK097282
)
(Krueppel-associated box domain containing protein.)
genome : 55,980,331 - 56,008,433 (28,103)
query : 1 - 2,065 (2,065/2,065)
4 exons
identity = 0.997
5'(1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217546)
HIX0217546
HIT000318703 (
NM_182633
)
(Krueppel-associated box domain containing protein.)
genome : 55,980,331 - 56,008,433 (28,103)
query : 1 - 2,065 (2,065/2,065)
4 exons
identity = 0.997
5'(1.000;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217546)
HIX0123506
HIT000436950
(
DQ570419
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,010,570 - 56,010,599 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123506)
HIX0217490
HIT000112596 (
ENST00000285298
)
(Ribosomal protein S17 family protein.)
genome : 56,019,512 - 56,024,192 (4,681)
query : 1 - 1,843 (1,843/1,843)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217490)
HIX0217490
HIT000009827
(
AK026553
)
Representative transcript
(Ribosomal protein S17 family protein.)
genome : 56,019,575 - 56,024,193 (4,619)
query : 1 - 1,782 (1,782/1,809)
3 exons
identity = 0.998
5'(1.000;1.000;0.997)3'
coverage = 0.999
InterPro :
IPR000266 : Ribosomal protein S17
IPR012340 : Nucleic acid-binding, OB-fold
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217490)
HIX0217490
HIT000098590
(
BC047445
)
(Ribosomal protein S17 family protein.)
genome : 56,019,580 - 56,024,189 (4,610)
query : 1 - 1,770 (1,770/1,788)
3 exons
identity = 0.997
5'(0.977;1.000;0.997)3'
coverage = 0.998
InterPro :
IPR000266 : Ribosomal protein S17
IPR012340 : Nucleic acid-binding, OB-fold
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217490)
HIX0217490
HIT000541383 (
ENST00000443449
)
(Ribosomal protein S17 family protein.)
genome : 56,019,656 - 56,022,865 (3,210)
query : 1 - 718 (718/718)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217490)
HIX0217490
HIT000094842
(
BC037405
)
(Ribosomal protein S17 family protein.)
genome : 56,020,870 - 56,022,951 (2,082)
query : 20 - 511 (492/525)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.963
InterPro :
IPR000266 : Ribosomal protein S17
IPR012340 : Nucleic acid-binding, OB-fold
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217490)
HIX0217490
HIT000001787
(
AF077035
)
(Conserved hypothetical protein.)
genome : 56,020,870 - 56,023,032 (2,163)
query : 12 - 584 (573/600)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 0.981
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217490)
HIX0217490
HIT000205753 (
NM_015969
)
(Ribosomal protein S17 family protein.)
genome : 56,020,870 - 56,023,032 (2,163)
query : 12 - 584 (573/600)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.981
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217490)
HIX0217490
HIT000054054
(
BC054031
)
(Ribosomal protein S17 family protein.)
genome : 56,020,870 - 56,023,032 (2,163)
query : 11 - 583 (573/635)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 0.983
InterPro :
IPR000266 : Ribosomal protein S17
IPR012340 : Nucleic acid-binding, OB-fold
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217490)
HIX0217490
HIT000059544
(
AB049950
)
(Ribosomal protein S17 family protein.)
genome : 56,020,870 - 56,022,954 (2,085)
query : 6 - 500 (495/500)
2 exons
identity = 0.998
5'(1.000;0.997)3'
coverage = 0.990
InterPro :
IPR000266 : Ribosomal protein S17
IPR012340 : Nucleic acid-binding, OB-fold
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217490)
HIX0217834
HIT000574530 (
ENST00000470036
)
(Conserved hypothetical protein.)
genome : 56,032,288 - 56,046,292 (14,005)
query : 1 - 497 (497/497)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217834)
HIX0006703
HIT000005499
(
AK022225
)
Representative transcript
(Conserved hypothetical protein.)
genome : 56,041,159 - 56,061,616 (20,458)
query : 1 - 1,861 (1,861/1,861)
2 exons
identity = 0.989
3'(0.986;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 12, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006703)
HIX0217588
HIT000044909
(
AK125036
)
Representative transcript
(NIPSNAP family protein.)
genome : 56,046,600 - 56,067,871 (21,272)
query : 2 - 4,256 (4,255/4,256)
7 exons
identity = 0.998
5'(0.998;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR011008 : Dimeric alpha-beta barrel
IPR012577 : NIPSNAP
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 13.5, extr 10, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217588)
HIX0217588
HIT000600561 (
ENST00000497279
)
(NIPSNAP family protein.)
genome : 56,046,600 - 56,067,871 (21,272)
query : 1 - 4,255 (4,255/4,255)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 13.5, extr 10, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217588)
HIX0217588
HIT000513901 (
ENST00000415967
)
(Conserved hypothetical protein.)
genome : 56,049,166 - 56,066,997 (17,832)
query : 1 - 872 (872/872)
8 exons
identity = 0.991
5'(1.000;1.000;1.000;1.000;0.952;0.947;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 12, extr 10, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217588)
HIX0217588
HIT000569500 (
ENST00000464772
)
(Conserved hypothetical protein.)
genome : 56,049,464 - 56,051,483 (2,020)
query : 1 - 573 (573/573)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217588)
HIX0021579
HIT000054254
(
BX537439
)
Representative transcript
(Phosphoserine phosphatase; PSP; PSPase; EC=3.1.3.3; L-3-phosphoserine phosphatase; O-phosphoserine phosphohydrolase;)
genome : 56,078,761 - 56,119,190 (40,430)
query : 1 - 2,074 (2,074/2,196)
8 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
0.994)5'
coverage = 0.999
EC number :
EC 3.1.3.3
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR004469 : Phosphoserine phosphatase SerB
IPR006383 : HAD-superfamily hydrolase, subfamily IB, PSPase-like
IPR023190 : Phosphoserine phosphatase, domain 2
IPR023214 : HAD-like domain
GO :
0004647 : Molecular Function : phosphoserine phosphatase activity
0006564 : Biological Process : L-serine biosynthetic process
0008152 : Biological Process : metabolic process
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 25, cyto 4, cyto_nucl 3.33333, cyto_plas 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK088865
Rattus
sp. (Rat) : BC088310
Bos
sp. (Cow) : BC112884
Gallus
sp. (Chicken) : BX932547
Pongo
sp. (Orangutan) : CR858212
Danio
sp. (Zebrafish) : ENSDART00000102299
Equus
sp. (Horse) : ENSECAT00000022277
Monodelphis
sp. (Opossum) : ENSMODT00000008333
Oryzias
sp. (Medaka) : ENSORLT00000009771
Tetraodon
sp. (Tetraodon) : GSTENT00035700001
Takifugu
sp. (Fugu) : SINFRUT00000162591
Pan
sp. (Chimpanzee) : XM_001161020
Canis
sp. (Dog) : XM_843195
Macaca
sp. (Macaque) : XR_011559
HIX0021579
HIT000325575
(
Y10275
)
(Phosphoserine phosphatase; PSP; PSPase; EC=3.1.3.3; L-3-phosphoserine phosphatase; O-phosphoserine phosphohydrolase;)
genome : 56,078,745 - 56,183,976 (105,232)
query : 1 - 1,575 (1,575/1,600)
7 exons
identity = 0.975
3'(0.999;1.000;1.000;1.000;0.987;0.784;0.822)5'
coverage = 1.000
EC number :
EC 3.1.3.3
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR004469 : Phosphoserine phosphatase SerB
IPR006383 : HAD-superfamily hydrolase, subfamily IB, PSPase-like
IPR023190 : Phosphoserine phosphatase, domain 2
IPR023214 : HAD-like domain
GO :
0004647 : Molecular Function : phosphoserine phosphatase activity
0006564 : Biological Process : L-serine biosynthetic process
0008152 : Biological Process : metabolic process
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 26, cyto 4, cyto_nucl 3.33333, cyto_plas 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000201321 (
NM_004577
)
(Phosphoserine phosphatase; PSP; PSPase; EC=3.1.3.3; L-3-phosphoserine phosphatase; O-phosphoserine phosphohydrolase;)
genome : 56,078,745 - 56,119,268 (40,524)
query : 1 - 2,117 (2,117/2,142)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.3
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 25, cyto 4, cyto_nucl 3.33333, cyto_plas 2.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000261068
(
BC063614
)
(Phosphoserine phosphatase; PSP; PSPase; EC=3.1.3.3; L-3-phosphoserine phosphatase; O-phosphoserine phosphohydrolase;)
genome : 56,078,760 - 56,119,116 (40,357)
query : 1 - 1,951 (1,951/1,987)
8 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.3
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR004469 : Phosphoserine phosphatase SerB
IPR006383 : HAD-superfamily hydrolase, subfamily IB, PSPase-like
IPR023190 : Phosphoserine phosphatase, domain 2
IPR023214 : HAD-like domain
GO :
0004647 : Molecular Function : phosphoserine phosphatase activity
0006564 : Biological Process : L-serine biosynthetic process
0008152 : Biological Process : metabolic process
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 25, cyto 4, cyto_nucl 3.33333, cyto_plas 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000535289 (
ENST00000437355
)
(Phosphoserine phosphatase; PSP; PSPase; EC=3.1.3.3; L-3-phosphoserine phosphatase; O-phosphoserine phosphohydrolase;)
genome : 56,078,744 - 56,119,141 (40,398)
query : 1 - 1,409 (1,409/1,409)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.3
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 25, cyto 4, cyto_nucl 3.33333, cyto_plas 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000111325 (
ENST00000275605
)
(Phosphoserine phosphatase; PSP; PSPase; EC=3.1.3.3; L-3-phosphoserine phosphatase; O-phosphoserine phosphohydrolase;)
genome : 56,078,760 - 56,119,297 (40,538)
query : 1 - 2,131 (2,131/2,131)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.3
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 25, cyto 4, cyto_nucl 3.33333, cyto_plas 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000478843 (
ENST00000395471
)
(Phosphoserine phosphatase; PSP; PSPase; EC=3.1.3.3; L-3-phosphoserine phosphatase; O-phosphoserine phosphohydrolase;)
genome : 56,078,761 - 56,119,297 (40,537)
query : 1 - 2,178 (2,178/2,178)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.3
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 25, cyto 4, cyto_nucl 3.33333, cyto_plas 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000564787 (
ENST00000459834
)
(Phosphoserine phosphatase; PSP; PSPase; EC=3.1.3.3; L-3-phosphoserine phosphatase; O-phosphoserine phosphohydrolase;)
genome : 56,079,231 - 56,101,864 (22,634)
query : 1 - 692 (692/692)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.3
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13.5, cyto 7.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000331288
(
AK223508
)
(Phosphoserine phosphatase; PSP; PSPase; EC=3.1.3.3; L-3-phosphoserine phosphatase; O-phosphoserine phosphohydrolase;)
genome : 56,079,244 - 56,088,924 (9,681)
query : 1 - 908 (908/908)
5 exons
identity = 0.998
3'(1.000;0.993;0.993;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.3
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR004469 : Phosphoserine phosphatase SerB
IPR006383 : HAD-superfamily hydrolase, subfamily IB, PSPase-like
IPR023190 : Phosphoserine phosphatase, domain 2
IPR023214 : HAD-like domain
GO :
0004647 : Molecular Function : phosphoserine phosphatase activity
0006564 : Biological Process : L-serine biosynthetic process
0008152 : Biological Process : metabolic process
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000434101
(
AK315235
)
(Phosphoserine phosphatase; PSP; PSPase; EC=3.1.3.3; L-3-phosphoserine phosphatase; O-phosphoserine phosphohydrolase;)
genome : 56,079,455 - 56,101,849 (22,395)
query : 1 - 1,019 (1,019/1,019)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
EC number :
EC 3.1.3.3
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR004469 : Phosphoserine phosphatase SerB
IPR006383 : HAD-superfamily hydrolase, subfamily IB, PSPase-like
IPR023190 : Phosphoserine phosphatase, domain 2
IPR023214 : HAD-like domain
GO :
0004647 : Molecular Function : phosphoserine phosphatase activity
0006564 : Biological Process : L-serine biosynthetic process
0008152 : Biological Process : metabolic process
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 25, cyto 4, cyto_nucl 3.33333, cyto_plas 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000519560 (
ENST00000421626
)
(Phosphoserine phosphatase; PSP; PSPase; EC=3.1.3.3; L-3-phosphoserine phosphatase; O-phosphoserine phosphohydrolase;)
genome : 56,082,724 - 56,101,849 (19,126)
query : 1 - 826 (826/826)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.3
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 26, cyto 5, cyto_nucl 3.33333, cyto_plas 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000525731 (
ENST00000427797
)
(Phosphoserine phosphatase; PSP; PSPase; EC=3.1.3.3; L-3-phosphoserine phosphatase; O-phosphoserine phosphohydrolase;)
genome : 56,084,970 - 56,101,865 (16,896)
query : 1 - 809 (809/809)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.3
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 10, cyto_nucl 9, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000519246 (
ENST00000421312
)
(Phosphoserine phosphatase; PSP; PSPase; EC=3.1.3.3; L-3-phosphoserine phosphatase; O-phosphoserine phosphohydrolase;)
genome : 56,088,766 - 56,119,160 (30,395)
query : 1 - 633 (633/633)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.3
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8.5, cyto_nucl 6.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000517918 (
ENST00000419984
)
(Phosphoserine phosphatase; PSP; PSPase; EC=3.1.3.3; L-3-phosphoserine phosphatase; O-phosphoserine phosphohydrolase;)
genome : 56,088,766 - 56,118,981 (30,216)
query : 1 - 744 (744/744)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.3
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8.5, cyto_nucl 6.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000522530 (
ENST00000424596
)
(Hypothetical short protein.)
genome : 56,088,874 - 56,119,139 (30,266)
query : 1 - 555 (555/555)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000514526 (
ENST00000416592
)
(Conserved hypothetical protein.)
genome : 56,088,899 - 56,119,160 (30,262)
query : 1 - 739 (739/739)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000511152 (
ENST00000413218
)
(Hypothetical protein.)
genome : 56,088,899 - 56,119,085 (30,187)
query : 1 - 539 (539/539)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 13, cyto_nucl 9.83333, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000576658 (
ENST00000472276
)
(Conserved hypothetical protein.)
genome : 56,100,827 - 56,101,864 (1,038)
query : 1 - 572 (572/572)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, nucl 10.5, cyto_nucl 10.3333, cyto 7,
cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000259236
(
BC052958
)
(Conserved hypothetical protein.)
genome : 56,108,077 - 56,119,273 (11,197)
query : 1 - 2,819 (2,819/2,835)
3 exons
identity = 0.989
3'(0.987;1.000;0.998)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 10, nucl 5, cyto_pero 5, cyto_plas 5,
cyto_golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000011291
(
AK054677
)
(Conserved hypothetical protein.)
genome : 56,108,102 - 56,119,255 (11,154)
query : 1 - 1,864 (1,864/1,864)
5 exons
identity = 0.995
3'(0.993;0.988;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 4, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0095183
HIT000046029
(
AK126156
)
Representative transcript
(Conserved hypothetical protein.)
genome : 56,108,924 - 56,110,891 (1,968)
query : 1 - 1,967 (1,967/1,968)
1 exon
identity = 0.986
5'(0.986)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 12.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0095183)
HIX0201181
HIT000111324 (
ENST00000275603
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,119,323 - 56,131,682 (12,360)
query : 1 - 2,719 (2,719/2,719)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 5.5, E.R._mito 4.5, nucl 3, E.R. 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000198698 (
NM_001762
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,119,378 - 56,131,682 (12,305)
query : 1 - 2,664 (2,664/2,682)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 5.5, E.R._mito 4.5, nucl 3, E.R. 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000316626 (
NM_001009186
)
(T-complex protein 1 subunit zeta isoform b.)
genome : 56,119,378 - 56,131,682 (12,305)
query : 1 - 2,529 (2,529/2,547)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 5.5, E.R._mito 4.5, nucl 3, E.R. 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000129629 (
ENST00000335503
)
(T-complex protein 1 subunit zeta isoform b.)
genome : 56,119,378 - 56,131,682 (12,305)
query : 1 - 2,529 (2,529/2,529)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 5.5, E.R._mito 4.5, nucl 3, E.R. 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000059947
(
AB063318
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,119,407 - 56,131,682 (12,276)
query : 2 - 2,636 (2,635/2,647)
14 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.952;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012722 : T-complex protein 1, zeta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 5.5, E.R._mito 4.5, nucl 3, E.R. 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000192736
(
L27706
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,119,458 - 56,131,095 (11,638)
query : 3 - 1,999 (1,997/2,010)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012722 : T-complex protein 1, zeta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 5.5, E.R._mito 4.5, nucl 3, E.R. 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000338579
(
BC106941
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,119,462 - 56,131,433 (11,972)
query : 1 - 2,331 (2,331/2,331)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.990;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012722 : T-complex protein 1, zeta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 19, mito 6.5, E.R._mito 5, E.R. 2.5, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000338580
(
BC106942
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,119,462 - 56,131,433 (11,972)
query : 1 - 2,331 (2,331/2,331)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012722 : T-complex protein 1, zeta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 5.5, E.R._mito 4.5, nucl 3, E.R. 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000499843
(
AK316230
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,119,467 - 56,131,094 (11,628)
query : 1 - 1,894 (1,894/1,894)
14 exons
identity = 0.994
5'(0.965;0.914;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012722 : T-complex protein 1, zeta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000639331 (
ENST00000540286
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,119,467 - 56,131,094 (11,628)
query : 1 - 1,894 (1,894/1,894)
14 exons
identity = 0.995
5'(0.965;0.914;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000078722
(
AF385084
)
Representative transcript
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,119,487 - 56,131,682 (12,196)
query : 1 - 2,554 (2,554/2,562)
14 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000;1.000;0.993)3'
coverage = 0.997
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012722 : T-complex protein 1, zeta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 5.5, E.R._mito 4.5, nucl 3, E.R. 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720580
Mus
sp. (Mouse) : AK149757
Rattus
sp. (Rat) : BC104703
Danio
sp. (Zebrafish) : BC155176
Bos
sp. (Cow) : BT030538
Tetraodon
sp. (Tetraodon) : CR687293
Pongo
sp. (Orangutan) : CR858342
Canis
sp. (Dog) : ENSCAFT00000016127
Oryzias
sp. (Medaka) : ENSORLT00000003576
Takifugu
sp. (Fugu) : SINFRUT00000148527
Macaca
sp. (Macaque) : XM_001090105
Pan
sp. (Chimpanzee) : XM_001159391
Monodelphis
sp. (Opossum) : XM_001362571
Equus
sp. (Horse) : XM_001499414
HIX0201181
HIT000492375
(
AK297751
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,119,505 - 56,130,923 (11,419)
query : 1 - 1,590 (1,590/1,590)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.988;
1.000;0.993;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012722 : T-complex protein 1, zeta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 14.5, nucl 6, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000492995
(
AK298371
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,119,520 - 56,131,347 (11,828)
query : 1 - 2,094 (2,094/2,094)
14 exons
identity = 0.994
5'(0.933;0.914;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012722 : T-complex protein 1, zeta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000432685
(
AK313819
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,119,520 - 56,130,778 (11,259)
query : 1 - 1,618 (1,618/1,618)
14 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012722 : T-complex protein 1, zeta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 5.5, E.R._mito 4.5, nucl 3, E.R. 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000329663
(
AB209728
)
(T-complex protein 1 subunit zeta isoform b.)
genome : 56,119,546 - 56,131,682 (12,137)
query : 1 - 2,496 (2,496/2,496)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
0.988;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012722 : T-complex protein 1, zeta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 9, nucl 3, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000385815
(
AM295155
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,119,567 - 56,131,671 (12,105)
query : 1 - 2,467 (2,467/2,467)
14 exons
identity = 0.998
5'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012722 : T-complex protein 1, zeta subunit
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13.5, nucl 7.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000465723
(
DQ599192
)
(Non-protein coding transcript.)
genome : 56,122,120 - 56,122,149 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000196862
(
M94083
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,122,152 - 56,131,095 (8,944)
query : 27 - 1,648 (1,622/1,685)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.988;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.963
InterPro :
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR012722 : T-complex protein 1, zeta subunit
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 8, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000597275 (
ENST00000493855
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,122,169 - 56,123,549 (1,381)
query : 1 - 261 (261/261)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_mito 9.83333, cyto_plas 9.83333,
plas 5, mito 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0124302
HIT000469899 (
ENST00000383876
)
(Non-protein coding transcript.)
genome : 56,123,058 - 56,123,195 (138)
query : 1 - 138 (138/138)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0124302)
HIX0201181
HIT000586692 (
ENST00000482776
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,124,005 - 56,126,703 (2,699)
query : 1 - 765 (765/765)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cysk 15, cyto 12.5, cyto_nucl 9, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000596097 (
ENST00000492618
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,127,237 - 56,129,752 (2,516)
query : 1 - 692 (692/692)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 15, mito 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000571217 (
ENST00000466572
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; CCT-zeta;)
genome : 56,127,558 - 56,128,633 (1,076)
query : 1 - 686 (686/686)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 12, extr 5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0078795
HIT000367232 (
NR_002957
)
(Hypothetical short protein.)
genome : 56,128,163 - 56,128,295 (133)
query : 1 - 133 (133/133)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5, cyto_nucl 4.83333, cyto 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078795)
HIX0078795
HIT000383004
(
AJ609458
)
Representative transcript
(Hypothetical short protein.)
genome : 56,128,163 - 56,128,295 (133)
query : 1 - 133 (133/133)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5, cyto_nucl 4.83333, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078795)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : ENSCAFT00000032956
Equus
sp. (Horse) : ENSECAT00000027821
Macaca
sp. (Macaque) : ENSMMUT00000035094
Monodelphis
sp. (Opossum) : ENSMODT00000040482
Pongo
sp. (Orangutan) : ENSPPYT00000027538
Pan
sp. (Chimpanzee) : ENSPTRT00000053611
HIX0078795
HIT000470438 (
ENST00000384439
)
(Hypothetical short protein.)
genome : 56,128,163 - 56,128,295 (133)
query : 1 - 133 (133/133)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5, cyto_nucl 4.83333, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078795)
HIX0201181
HIT000566983 (
ENST00000462133
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,128,304 - 56,130,992 (2,689)
query : 1 - 665 (665/665)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, mito 4, plas 2, lyso 2, E.R._mito 2,
cyto_mito 2, mito_pero 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000598125 (
ENST00000494736
)
(T-complex protein 1 subunit zeta-2; TCP-1-zeta-2; CCT-zeta-2; CCT-zeta-like; TCP-1-zeta-like; Testis-specific Tcp20; Testis-specific protein TSA303;)
genome : 56,129,387 - 56,130,871 (1,485)
query : 17 - 411 (395/411)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14, extr 5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0201181
HIT000571130 (
ENST00000466479
)
(T-complex protein 1 subunit zeta; TCP-1-zeta; Acute morphine dependence-related protein 2; CCT-zeta-1; HTR3; Tcp20;)
genome : 56,130,312 - 56,131,313 (1,002)
query : 1 - 745 (745/745)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, cyto 2.5, cyto_nucl 2.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201181)
HIX0006704
HIT000478808 (
ENST00000395436
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,131,695 - 56,147,817 (16,123)
query : 1 - 1,683 (1,683/1,683)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, mito 8, E.R. 5, golg 4, cyto_mito 4,
mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000559641 (
NM_001130069
)
(Sulfatase-modifying factor 2 isoform e precursor.)
genome : 56,131,917 - 56,148,365 (16,449)
query : 1 - 1,909 (1,909/1,924)
8 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, mito 9, golg 5, mito_pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000205450 (
NM_015411
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,131,917 - 56,148,365 (16,449)
query : 1 - 2,054 (2,054/2,064)
9 exons
identity = 1.000
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, mito 8, E.R. 5, golg 5, extr_plas 5,
E.R._golg 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000397532 (
NM_001042469
)
(Sulfatase-modifying factor 2 isoform c precursor.)
genome : 56,131,917 - 56,148,365 (16,449)
query : 1 - 2,009 (2,009/2,019)
8 exons
identity = 1.000
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, mito 8, E.R. 5, golg 4, cyto_mito 4,
mito_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000397533 (
NM_001042470
)
(Sulfatase-modifying factor 2 isoform d precursor.)
genome : 56,131,917 - 56,148,365 (16,449)
query : 1 - 1,802 (1,802/1,812)
6 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, mito 11, E.R. 3, golg 3, E.R._golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000561691 (
NM_001146333
)
(Sulfatase-modifying factor 2 isoform g.)
genome : 56,131,917 - 56,148,365 (16,449)
query : 1 - 1,897 (1,897/1,907)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16.5, nucl 9, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000532460 (
ENST00000434526
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,131,917 - 56,148,363 (16,447)
query : 1 - 2,052 (2,052/2,052)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, mito 8, E.R. 5, golg 5, extr_plas 5,
E.R._golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000111326 (
ENST00000275607
)
(Sulfatase-modifying factor 2 isoform g.)
genome : 56,131,917 - 56,148,362 (16,446)
query : 1 - 1,894 (1,894/1,894)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16.5, nucl 9, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000478807 (
ENST00000395435
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,131,947 - 56,147,880 (15,934)
query : 1 - 1,287 (1,287/1,287)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, mito 11, E.R. 3, golg 3, E.R._golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000134820 (
ENST00000342190
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,131,948 - 56,148,363 (16,416)
query : 1 - 1,876 (1,876/1,876)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, mito 9, golg 5, mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000511886 (
ENST00000413952
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,131,948 - 56,146,195 (14,248)
query : 1 - 881 (881/881)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, mito 9, E.R. 5, mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000082510
(
AK075477
)
Representative transcript
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,131,958 - 56,148,357 (16,400)
query : 1 - 2,005 (2,005/2,005)
9 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK140169
Danio
sp. (Zebrafish) : BC083430
Bos
sp. (Cow) : BT021905
Gallus
sp. (Chicken) : BX935991
Tetraodon
sp. (Tetraodon) : CR723234
Pongo
sp. (Orangutan) : CR858204
Canis
sp. (Dog) : ENSCAFT00000016127
Oryzias
sp. (Medaka) : ENSORLT00000003589
Rattus
sp. (Rat) : ENSRNOT00000047364
Takifugu
sp. (Fugu) : SINFRUT00000148529
Macaca
sp. (Macaque) : XM_001105383
Pan
sp. (Chimpanzee) : XM_001160187
Monodelphis
sp. (Opossum) : XM_001366014
Equus
sp. (Horse) : XM_001493334
HIX0006704
HIT000495112
(
AK300488
)
(Sulfatase-modifying factor 2 isoform g.)
genome : 56,131,958 - 56,147,422 (15,465)
query : 1 - 913 (913/913)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16.5, nucl 9, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000550150 (
ENST00000452216
)
(Sulfatase-modifying factor 2 isoform g.)
genome : 56,131,958 - 56,147,422 (15,465)
query : 1 - 913 (913/913)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16.5, nucl 9, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000386583
(
BC111092
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,131,964 - 56,147,475 (15,512)
query : 1 - 1,117 (1,117/1,117)
9 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000261785
(
BC065222
)
(Sulfatase-modifying factor 2 isoform c precursor.)
genome : 56,131,970 - 56,148,358 (16,389)
query : 1 - 1,686 (1,686/1,750)
6 exons
identity = 0.998
5'(1.000;0.994;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000534716 (
ENST00000436782
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,131,970 - 56,148,358 (16,389)
query : 1 - 1,683 (1,683/1,683)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000307030
(
CR936757
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,131,975 - 56,148,365 (16,391)
query : 2 - 1,997 (1,996/2,149)
9 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 0.999
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000493229
(
AK298605
)
(Sulfatase-modifying factor 2 isoform g.)
genome : 56,131,977 - 56,147,525 (15,549)
query : 1 - 947 (947/947)
7 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 2, E.R. 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000535241 (
ENST00000437307
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,131,977 - 56,147,525 (15,549)
query : 1 - 947 (947/947)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 2, E.R. 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000307022
(
CR936749
)
(Sulfatase-modifying factor 2 isoform g.)
genome : 56,131,983 - 56,147,817 (15,835)
query : 2 - 1,397 (1,396/1,533)
8 exons
identity = 0.997
5'(1.000;0.987;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 0.959
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, E.R. 4, golg 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000511690 (
ENST00000413756
)
(Sulfatase-modifying factor 2 isoform e precursor.)
genome : 56,131,982 - 56,147,429 (15,448)
query : 1 - 1,171 (1,171/1,171)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, E.R. 2, golg 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000266048
(
BC084539
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,131,987 - 56,148,363 (16,377)
query : 1 - 1,983 (1,983/2,051)
9 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000253147
(
AY359103
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,131,987 - 56,148,363 (16,377)
query : 1 - 1,984 (1,984/2,027)
9 exons
identity = 0.998
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)3'
coverage = 1.000
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000521697 (
ENST00000423763
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,131,994 - 56,148,331 (16,338)
query : 1 - 1,792 (1,792/1,792)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000587224 (
ENST00000483327
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,131,994 - 56,141,649 (9,656)
query : 1 - 1,195 (1,195/1,195)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000601985 (
ENST00000498777
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,131,998 - 56,142,090 (10,093)
query : 1 - 570 (570/570)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 2, E.R. 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000496251
(
AK301627
)
(Sulfatase-modifying factor 2 isoform b precursor.)
genome : 56,132,001 - 56,147,880 (15,880)
query : 2 - 1,234 (1,233/1,234)
6 exons
identity = 0.998
5'(1.000;0.994;1.000;1.000;1.000;0.998)3'
coverage = 0.999
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 2, E.R. 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000023933
(
AL050037
)
(Sulfatase-modifying factor 2 isoform g.)
genome : 56,132,001 - 56,148,362 (16,362)
query : 1 - 1,772 (1,772/1,783)
7 exons
identity = 0.997
5'(1.000;0.994;1.000;1.000;0.988;0.993;0.997)3'
coverage = 0.999
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000536067 (
ENST00000438133
)
(Sulfatase-modifying factor 2 isoform g.)
genome : 56,132,001 - 56,148,362 (16,362)
query : 1 - 1,771 (1,771/1,771)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000491666
(
AK297042
)
(Sulfatase-modifying factor 2 isoform g.)
genome : 56,132,001 - 56,147,609 (15,609)
query : 1 - 1,169 (1,169/1,169)
8 exons
identity = 0.998
5'(1.000;0.987;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, mito 4, E.R. 2, lyso 2, cyto_mito 2,
mito_pero 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000492417
(
AK297793
)
(Sulfatase-modifying factor 2 isoform g.)
genome : 56,132,003 - 56,147,568 (15,566)
query : 1 - 1,249 (1,249/1,249)
9 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000545435 (
ENST00000447501
)
(Sulfatase-modifying factor 2 isoform g.)
genome : 56,132,003 - 56,147,568 (15,566)
query : 1 - 1,249 (1,249/1,249)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000251750
(
AY323911
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,132,005 - 56,147,305 (15,301)
query : 1 - 906 (906/906)
9 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000549272 (
ENST00000451338
)
(Sulfatase-modifying factor 2 isoform g.)
genome : 56,132,014 - 56,147,260 (15,247)
query : 1 - 912 (912/912)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 4, lyso 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000086605
(
BC006159
)
(Sulfatase-modifying factor 2 isoform g.)
genome : 56,132,019 - 56,148,356 (16,338)
query : 1 - 1,942 (1,942/2,005)
9 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 0.999
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 7.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000037207
(
BC015600
)
(Sulfatase-modifying factor 2 isoform g.)
genome : 56,132,020 - 56,148,363 (16,344)
query : 1 - 1,803 (1,803/1,822)
8 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 2, E.R. 2, lyso 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000085810
(
BC000224
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,132,025 - 56,148,363 (16,339)
query : 1 - 1,787 (1,787/1,830)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR005532 : Sulfatase-modifying factor enzyme
IPR016187 : C-type lectin fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16.5, nucl 9, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000628614 (
ENST00000529457
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,132,025 - 56,142,482 (10,458)
query : 1 - 568 (568/568)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 9, cyto 4.5, cyto_nucl 4.33333,
cyto_pero 3.16667, nucl 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000566773 (
ENST00000461912
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,144,221 - 56,145,961 (1,741)
query : 1 - 529 (529/529)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000630362 (
ENST00000531229
)
(Sulfatase-modifying factor 2; C-alpha-formylglycine-generating enzyme 2; Precursor;)
genome : 56,144,296 - 56,147,440 (3,145)
query : 1 - 737 (737/737)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, plas 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006704
HIT000066068
(
AF075046
)
(Conserved hypothetical protein.)
genome : 56,147,862 - 56,148,356 (495)
query : 1 - 496 (496/506)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, extr 11, nucl 11, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006704)
HIX0006705
HIT000428369
(
AK309503
)
(Phosphorylase b kinase gamma catalytic chain, liver/testis isoform; PHK-gamma-LT; PHK-gamma-T; EC=2.7.11.19; Phosphorylase kinase subunit gamma-2;)
genome : 56,147,890 - 56,160,673 (12,784)
query : 1 - 1,480 (1,480/1,480)
4 exons
identity = 0.989
3'(0.991;0.963;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.19
InterPro :
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 15, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000053625
(
BC051327
)
Representative transcript
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,147,976 - 56,160,627 (12,652)
query : 1 - 2,068 (2,068/2,093)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR002291 : Phosphorylase kinase, gamma catalytic subunit
IPR008271 : Serine/threonine-protein kinase, active site
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0004689 : Molecular Function : phosphorylase kinase activity
0005516 : Molecular Function : calmodulin binding
0005524 : Molecular Function : ATP binding
0005964 : Cellular Component : phosphorylase kinase complex
0005978 : Biological Process : glycogen biosynthetic process
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, nucl 4.5, mito 3, pero 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720589
Mus
sp. (Mouse) : BC055102
Bos
sp. (Cow) : BC114159
Danio
sp. (Zebrafish) : BC125847
Oryzias
sp. (Medaka) : ENSORLT00000009744
Tetraodon
sp. (Tetraodon) : GSTENT00035702001
Takifugu
sp. (Fugu) : SINFRUT00000158003
Rattus
sp. (Rat) : X07320
Macaca
sp. (Macaque) : XM_001089751
Pan
sp. (Chimpanzee) : XM_001153926
Monodelphis
sp. (Opossum) : XM_001367799
Equus
sp. (Horse) : XM_001493353
Canis
sp. (Dog) : XM_546902
HIX0006705
HIT000202821 (
NM_006213
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,147,976 - 56,160,689 (12,714)
query : 1 - 2,130 (2,130/2,130)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, nucl 4.5, mito 3, pero 3,
mito_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000724312 (
NM_001258459
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,147,976 - 56,160,689 (12,714)
query : 1 - 2,226 (2,226/2,226)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14, nucl 4.5, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000724313 (
NM_001258460
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,147,976 - 56,160,689 (12,714)
query : 1 - 2,103 (2,103/2,103)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 3.5, mito 3, pero 3,
mito_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000727083 (
NR_047689
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,147,976 - 56,160,689 (12,714)
query : 1 - 2,075 (2,075/2,075)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, nucl 10.5, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000495552
(
AK300928
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform isoform 1.)
genome : 56,148,293 - 56,160,641 (12,349)
query : 1 - 1,738 (1,738/1,738)
10 exons
identity = 0.999
3'(1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR002291 : Phosphorylase kinase, gamma catalytic subunit
IPR008271 : Serine/threonine-protein kinase, active site
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0004689 : Molecular Function : phosphorylase kinase activity
0005516 : Molecular Function : calmodulin binding
0005524 : Molecular Function : ATP binding
0005964 : Cellular Component : phosphorylase kinase complex
0005978 : Biological Process : glycogen biosynthetic process
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, nucl 4.5, mito 3, pero 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000494053
(
AK299429
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,148,440 - 56,160,644 (12,205)
query : 2 - 1,567 (1,566/1,567)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;0.989;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002291 : Phosphorylase kinase, gamma catalytic subunit
IPR008271 : Serine/threonine-protein kinase, active site
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0004689 : Molecular Function : phosphorylase kinase activity
0005516 : Molecular Function : calmodulin binding
0005524 : Molecular Function : ATP binding
0005964 : Cellular Component : phosphorylase kinase complex
0005978 : Biological Process : glycogen biosynthetic process
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, nucl 10.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000487804
(
AK293180
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform isoform 1.)
genome : 56,148,440 - 56,160,644 (12,205)
query : 1 - 1,717 (1,717/1,717)
11 exons
identity = 0.998
3'(0.998;0.984;1.000;1.000;1.000;1.000;1.000;
0.982;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR002291 : Phosphorylase kinase, gamma catalytic subunit
IPR008271 : Serine/threonine-protein kinase, active site
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0004689 : Molecular Function : phosphorylase kinase activity
0005516 : Molecular Function : calmodulin binding
0005524 : Molecular Function : ATP binding
0005964 : Cellular Component : phosphorylase kinase complex
0005978 : Biological Process : glycogen biosynthetic process
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14, nucl 4.5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000550615 (
ENST00000452681
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,148,440 - 56,160,644 (12,205)
query : 1 - 1,717 (1,717/1,717)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14, nucl 4.5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000636405 (
ENST00000537360
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,148,440 - 56,160,644 (12,205)
query : 1 - 1,566 (1,566/1,566)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, nucl 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000323810
(
X80590
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,148,675 - 56,160,610 (11,936)
query : 4 - 1,355 (1,352/1,377)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.997
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR002291 : Phosphorylase kinase, gamma catalytic subunit
IPR008271 : Serine/threonine-protein kinase, active site
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0004689 : Molecular Function : phosphorylase kinase activity
0005516 : Molecular Function : calmodulin binding
0005524 : Molecular Function : ATP binding
0005964 : Cellular Component : phosphorylase kinase complex
0005978 : Biological Process : glycogen biosynthetic process
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, nucl 4.5, mito 3, pero 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000114793 (
ENST00000297373
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,148,675 - 56,160,689 (12,015)
query : 1 - 1,431 (1,431/1,431)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, nucl 4.5, mito 3, pero 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000263889
(
BC069738
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,148,698 - 56,160,606 (11,909)
query : 1 - 1,325 (1,325/1,325)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR002291 : Phosphorylase kinase, gamma catalytic subunit
IPR008271 : Serine/threonine-protein kinase, active site
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0004689 : Molecular Function : phosphorylase kinase activity
0005516 : Molecular Function : calmodulin binding
0005524 : Molecular Function : ATP binding
0005964 : Cellular Component : phosphorylase kinase complex
0005978 : Biological Process : glycogen biosynthetic process
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, nucl 4.5, mito 3, pero 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000263905
(
BC069754
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,148,698 - 56,160,606 (11,909)
query : 1 - 1,325 (1,325/1,325)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR002291 : Phosphorylase kinase, gamma catalytic subunit
IPR008271 : Serine/threonine-protein kinase, active site
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0004689 : Molecular Function : phosphorylase kinase activity
0005516 : Molecular Function : calmodulin binding
0005524 : Molecular Function : ATP binding
0005964 : Cellular Component : phosphorylase kinase complex
0005978 : Biological Process : glycogen biosynthetic process
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, nucl 4.5, mito 3, pero 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000263830
(
BC069679
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,148,699 - 56,160,606 (11,908)
query : 1 - 1,323 (1,323/1,323)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.987)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR002291 : Phosphorylase kinase, gamma catalytic subunit
IPR008271 : Serine/threonine-protein kinase, active site
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0004689 : Molecular Function : phosphorylase kinase activity
0005516 : Molecular Function : calmodulin binding
0005524 : Molecular Function : ATP binding
0005964 : Cellular Component : phosphorylase kinase complex
0005978 : Biological Process : glycogen biosynthetic process
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, nucl 4.5, mito 3, pero 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000263806
(
BC069655
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,148,703 - 56,160,605 (11,903)
query : 1 - 1,328 (1,328/1,328)
10 exons
identity = 0.993
3'(0.997;1.000;1.000;1.000;1.000;0.985;0.906;
1.000;1.000;0.987)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR002291 : Phosphorylase kinase, gamma catalytic subunit
IPR008271 : Serine/threonine-protein kinase, active site
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0004689 : Molecular Function : phosphorylase kinase activity
0005516 : Molecular Function : calmodulin binding
0005524 : Molecular Function : ATP binding
0005964 : Cellular Component : phosphorylase kinase complex
0005978 : Biological Process : glycogen biosynthetic process
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, nucl 4.5, mito 3, pero 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000265260
(
BC074753
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,148,719 - 56,156,668 (7,950)
query : 6 - 1,231 (1,226/1,231)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;0.989;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.996
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR002291 : Phosphorylase kinase, gamma catalytic subunit
IPR008271 : Serine/threonine-protein kinase, active site
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0004689 : Molecular Function : phosphorylase kinase activity
0005516 : Molecular Function : calmodulin binding
0005524 : Molecular Function : ATP binding
0005964 : Cellular Component : phosphorylase kinase complex
0005978 : Biological Process : glycogen biosynthetic process
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, nucl 4.5, mito 3, pero 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000431717
(
AK312851
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,148,747 - 56,160,689 (11,943)
query : 1 - 1,359 (1,359/1,359)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;0.989;0.994;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR002291 : Phosphorylase kinase, gamma catalytic subunit
IPR008271 : Serine/threonine-protein kinase, active site
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0004689 : Molecular Function : phosphorylase kinase activity
0005516 : Molecular Function : calmodulin binding
0005524 : Molecular Function : ATP binding
0005964 : Cellular Component : phosphorylase kinase complex
0005978 : Biological Process : glycogen biosynthetic process
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14, nucl 6, mito 3, pero 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000544362 (
ENST00000446428
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,149,410 - 56,160,625 (11,216)
query : 1 - 483 (483/483)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15, nucl 4.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000530057 (
ENST00000432123
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,149,707 - 56,160,639 (10,933)
query : 1 - 582 (582/582)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13, extr 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000576078 (
ENST00000471665
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform isoform 1.)
genome : 56,150,844 - 56,155,386 (4,543)
query : 1 - 453 (453/453)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 15.5, nucl 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000478801 (
ENST00000395428
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform isoform 1.)
genome : 56,151,034 - 56,160,645 (9,612)
query : 1 - 580 (580/580)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 17, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000593201 (
ENST00000489604
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,151,854 - 56,160,644 (8,791)
query : 1 - 551 (551/551)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 16.5, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000572327 (
ENST00000467726
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,154,568 - 56,160,670 (6,103)
query : 1 - 588 (588/588)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15, nucl 7.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0006705
HIT000595619 (
ENST00000492124
)
(Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; PHK-gamma-M; EC=2.7.11.19; Phosphorylase kinase subunit gamma-1; Serine/threonine-protein kinase PHKG1; EC=2.7.11.1; EC=2.7.11.26;)
genome : 56,156,247 - 56,160,689 (4,443)
query : 1 - 583 (583/583)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
,
EC 2.7.11.19
,
EC 2.7.11.26
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006705)
HIX0201114
HIT000001812
(
AF078845
)
Representative transcript
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial; Aging-associated gene 10 protein; HCV NS2 trans-regulated protein; NS2TP; Precursor;)
genome : 56,169,267 - 56,174,167 (4,901)
query : 21 - 814 (794/841)
4 exons
identity = 0.994
3'(0.993;0.993;1.000;0.982)5'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, cyto_mito 9.33333, cyto_nucl 8.66667,
nucl 8.5, cyto 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201114)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720245
Mus
sp. (Mouse) : AK010551
Mus
sp. (Mouse) : AK088374
Bos
sp. (Cow) : BC102231
Danio
sp. (Zebrafish) : BC152211
Oryzias
sp. (Medaka) : ENSORLT00000009700
Pongo
sp. (Orangutan) : ENSPPYT00000020437
Tetraodon
sp. (Tetraodon) : GSTENT00001265001
Takifugu
sp. (Fugu) : SINFRUT00000158006
Rattus
sp. (Rat) : XM_001078332
Macaca
sp. (Macaque) : XM_001089512
Pan
sp. (Chimpanzee) : XM_001161277
Monodelphis
sp. (Opossum) : XM_001362482
Equus
sp. (Horse) : XM_001499574
Canis
sp. (Dog) : XM_536830
HIX0201114
HIT000264791
(
BC071985
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial; Aging-associated gene 10 protein; HCV NS2 trans-regulated protein; NS2TP; Precursor;)
genome : 56,169,262 - 56,174,143 (4,882)
query : 1 - 775 (775/793)
4 exons
identity = 0.996
3'(0.997;1.000;1.000;0.977)5'
coverage = 1.000
InterPro :
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, cyto_mito 9.33333, cyto_nucl 8.66667,
nucl 8.5, cyto 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201114)
HIX0201114
HIT000037232
(
BC015639
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial; Aging-associated gene 10 protein; HCV NS2 trans-regulated protein; NS2TP; Precursor;)
genome : 56,169,262 - 56,174,127 (4,866)
query : 1 - 759 (759/776)
4 exons
identity = 0.997
3'(0.997;1.000;1.000;0.986)5'
coverage = 1.000
InterPro :
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, cyto_mito 9.33333, cyto_nucl 8.66667,
nucl 8.5, cyto 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201114)
HIX0201114
HIT000262222
(
BC066331
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial; Aging-associated gene 10 protein; HCV NS2 trans-regulated protein; NS2TP; Precursor;)
genome : 56,169,264 - 56,174,146 (4,883)
query : 1 - 774 (774/789)
4 exons
identity = 0.992
3'(0.990;1.000;0.996;0.978)5'
coverage = 0.999
InterPro :
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12.5, cyto_mito 9.83333, cyto_nucl 8.16667,
nucl 7.5, cyto 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201114)
HIX0201114
HIT000205900 (
NM_016139
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial; Aging-associated gene 10 protein; HCV NS2 trans-regulated protein; NS2TP; Precursor;)
genome : 56,169,267 - 56,174,187 (4,921)
query : 1 - 814 (814/831)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, cyto_mito 9.33333, cyto_nucl 8.66667,
nucl 8.5, cyto 5.5, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201114)
HIX0201114
HIT000031409
(
BC003079
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial; Aging-associated gene 10 protein; HCV NS2 trans-regulated protein; NS2TP; Precursor;)
genome : 56,169,267 - 56,174,143 (4,877)
query : 1 - 770 (770/787)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, cyto_mito 9.33333, cyto_nucl 8.66667,
nucl 8.5, cyto 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201114)
HIX0201114
HIT000336165
(
BC100275
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial; Aging-associated gene 10 protein; HCV NS2 trans-regulated protein; NS2TP; Precursor;)
genome : 56,169,267 - 56,174,139 (4,873)
query : 1 - 766 (766/780)
4 exons
identity = 0.997
3'(0.997;1.000;1.000;0.988)5'
coverage = 1.000
InterPro :
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, cyto_mito 9.33333, cyto_nucl 8.66667,
nucl 8.5, cyto 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201114)
HIX0201114
HIT000478795 (
ENST00000395422
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial; Aging-associated gene 10 protein; HCV NS2 trans-regulated protein; NS2TP; Precursor;)
genome : 56,169,262 - 56,174,269 (5,008)
query : 1 - 901 (901/901)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, cyto_mito 9.33333, cyto_nucl 8.66667,
nucl 8.5, cyto 5.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201114)
HIX0201114
HIT000577438 (
ENST00000473095
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial precursor.)
genome : 56,170,329 - 56,174,124 (3,796)
query : 1 - 694 (694/694)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10.5, cyto_mito 9.16667, cyto_nucl 9, nucl 8.5,
cyto 6, extr 5, cyto_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201114)
HIX0201114
HIT000332038
(
AY633613
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial; Aging-associated gene 10 protein; HCV NS2 trans-regulated protein; NS2TP; Precursor;)
genome : 56,170,559 - 56,174,127 (3,569)
query : 1 - 467 (467/481)
3 exons
identity = 0.998
3'(1.000;1.000;0.986)5'
coverage = 0.971
InterPro :
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, cyto_mito 9.33333, cyto_nucl 8.66667,
nucl 8.5, cyto 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201114)
HIX0201114
HIT000517964_02 (
ENST00000420030
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial precursor.)
genome : 56,170,559 - 56,174,114 (3,556)
query : 2 - 452 (451/462)
3 exons
identity = 0.969
3'(0.973;0.980;0.914)5'
coverage = 0.976
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.5, cyto_mito 8.66667, nucl 8.5, mito 8.5,
cyto 7, extr 6, cyto_pero 5.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201114)
HIX0201114
HIT000255726
(
AY605046
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial; Aging-associated gene 10 protein; HCV NS2 trans-regulated protein; NS2TP; Precursor;)
genome : 56,170,559 - 56,174,106 (3,548)
query : 1 - 446 (446/456)
3 exons
identity = 0.998
3'(0.993;1.000;1.000)5'
coverage = 0.978
InterPro :
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, cyto_mito 9.33333, cyto_nucl 8.66667,
nucl 8.5, cyto 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201114)
HIX0201114
HIT000566597_02 (
ENST00000461726
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial precursor.)
genome : 56,170,559 - 56,174,106 (3,548)
query : 1 - 446 (446/456)
3 exons
identity = 0.964
3'(0.945;0.972;0.980)5'
coverage = 0.978
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9.5, cyto_mito 9.16667, cyto_nucl 9, nucl 7.5,
cyto 7, extr 6, cyto_pero 5.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201114)
HIX0201114
HIT000327159
(
Z36851
)
(Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial precursor.)
genome : 56,171,918 - 56,174,139 (2,222)
query : 2 - 341 (340/344)
2 exons
identity = 0.976
3'(0.977;0.976)5'
coverage = 0.988
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201114)
HIX0021579
HIT000097719
(
BC043523
)
(Nuclear protein 1 isoform a.)
genome : 56,182,374 - 56,184,090 (1,717)
query : 1 - 600 (600/682)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR018792 : Nuclear phosphoprotein p8, DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 17, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000561463 (
NM_001145712
)
(Nuclear protein 1 isoform a.)
genome : 56,182,374 - 56,184,090 (1,717)
query : 1 - 600 (600/682)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 17, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0021579
HIT000126053 (
ENST00000329309
)
(Nuclear protein 1 isoform a.)
genome : 56,182,374 - 56,184,093 (1,720)
query : 1 - 603 (603/603)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 17, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021579)
HIX0167945
HIT000447366_04
(
DQ580835
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,185,526 - 56,185,556 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167945)
HIX0168541
HIT000539998 (
ENST00000442064
)
(CD225/Dispanin family protein.)
genome : 56,230,838 - 56,231,226 (389)
query : 1 - 389 (389/389)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168541)
HIX0168661
HIT000547999 (
ENST00000450065
)
(Ribonuclease T2-like family protein.)
genome : 56,243,327 - 56,244,105 (779)
query : 1 - 779 (779/779)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168661)
HIX0168671
HIT000548534 (
ENST00000450600
)
(Cyclin, C-terminal domain containing protein.)
genome : 56,296,327 - 56,297,475 (1,149)
query : 1 - 1,149 (1,149/1,149)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 21, extr 5, pero 3, cyto 2.5, extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168671)
HIX0168648
HIT000547360 (
ENST00000449426
)
(Armadillo-like helical domain containing protein.)
genome : 56,355,923 - 56,359,118 (3,196)
query : 1 - 2,884 (2,884/2,884)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168648)
HIX0167733
HIT000515216 (
ENST00000417282
)
(Protein phosphatase 2A, regulatory B subunit, B56 family protein.)
genome : 56,372,371 - 56,373,219 (849)
query : 1 - 849 (849/849)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 9.5, cyto_nucl 9, cyto 5.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167733)
HIX0167882
HIT000347560 (
ENST00000366280
)
(Hypothetical protein.)
genome : 56,390,497 - 56,391,294 (798)
query : 1 - 340 (340/340)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 6, extr 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167882)
HIX0168611
HIT000545170 (
ENST00000447236
)
(Conserved hypothetical protein.)
genome : 56,428,055 - 56,428,234 (180)
query : 1 - 180 (180/180)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, extr 3, plas 2, nucl 2, cysk 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168611)
HIX0025388
HIT000553734 (
ENST00000455800
)
(Conserved hypothetical protein.)
genome : 56,430,151 - 56,432,963 (2,813)
query : 1 - 2,813 (2,813/2,813)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 27, mito 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025388)
HIX0167911
HIT000441174_13
(
DQ574643
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,437,515 - 56,437,546 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167911)
HIX0167912
HIT000441174_14
(
DQ574643
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,438,744 - 56,438,775 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167912)
HIX0167913
HIT000441174_15
(
DQ574643
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,440,042 - 56,440,073 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167913)
HIX0167914
HIT000441174_16
(
DQ574643
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,441,336 - 56,441,367 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167914)
HIX0167921
HIT000441206_04
(
DQ574675
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,443,216 - 56,443,245 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167921)
HIX0167980
HIT000457489_11
(
DQ590958
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,443,464 - 56,443,494 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167980)
HIX0167905
HIT000439481_08
(
DQ572950
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,443,931 - 56,443,960 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167905)
HIX0167675
HIT000440383_10
(
DQ573852
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,444,124 - 56,444,154 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167675)
HIX0167675
HIT000440382_10
(
DQ573851
)
(Non-protein coding transcript.)
genome : 56,444,125 - 56,444,154 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167675)
HIX0167675
HIT000451748_10
(
DQ585217
)
(Non-protein coding transcript.)
genome : 56,444,143 - 56,444,172 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167675)
HIX0167675
HIT000451502_14
(
DQ584971
)
(Non-protein coding transcript.)
genome : 56,444,154 - 56,444,183 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167675)
HIX0167988
HIT000459005_09
(
DQ592474
)
(Non-protein coding transcript.)
genome : 56,444,268 - 56,444,297 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167988)
HIX0167988
HIT000466330_09
(
DQ599799
)
(Non-protein coding transcript.)
genome : 56,444,268 - 56,444,297 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167988)
HIX0167988
HIT000460021_16
(
DQ593490
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,444,269 - 56,444,298 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167988)
HIX0167929
HIT000442993_10
(
DQ576462
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,444,342 - 56,444,371 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167929)
HIX0167967
HIT000454157_04
(
DQ587626
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,444,619 - 56,444,648 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167967)
HIX0167679
HIT000441801_14
(
DQ575270
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,444,688 - 56,444,719 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167679)
HIX0167679
HIT000441800_14
(
DQ575269
)
(Non-protein coding transcript.)
genome : 56,444,690 - 56,444,719 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167679)
HIX0167920
HIT000441203_11
(
DQ574672
)
(Non-protein coding transcript.)
genome : 56,444,738 - 56,444,768 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167920)
HIX0167920
HIT000441190_09
(
DQ574659
)
(Non-protein coding transcript.)
genome : 56,444,769 - 56,444,799 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167920)
HIX0167920
HIT000441191_09
(
DQ574660
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,444,768 - 56,444,799 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167920)
HIX0167920
HIT000441189_09
(
DQ574658
)
(Non-protein coding transcript.)
genome : 56,444,769 - 56,444,799 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167920)
HIX0167917
HIT000680356_04 (
ENST00000567343
)
(Hypothetical protein.)
genome : 56,445,423 - 56,446,323 (901)
query : 1 - 901 (901/901)
1 exon
identity = 0.962
3'(0.962)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 10, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167917)
HIX0167917
HIT000459011_10
(
DQ592480
)
(Non-protein coding transcript.)
genome : 56,446,148 - 56,446,175 (28)
query : 3 - 30 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167917)
HIX0167917
HIT000441201_06
(
DQ574670
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,446,177 - 56,446,208 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167917)
HIX0168673
HIT000548616 (
ENST00000450682
)
(Conserved hypothetical protein.)
genome : 56,448,669 - 56,449,005 (337)
query : 1 - 337 (337/337)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168673)
HIX0207902
HIT000442694_10
(
DQ576163
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,454,235 - 56,454,265 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207902)
HIX0168339
HIT000528099 (
ENST00000430165
)
(GTF2I-like repeat containing protein.)
genome : 56,476,392 - 56,476,903 (512)
query : 1 - 186 (186/186)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.1667, cyto_plas 12.3333,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168339)
HIX0167719
HIT000520146 (
ENST00000422212
)
(Conserved hypothetical protein.)
genome : 56,489,550 - 56,500,395 (10,846)
query : 1 - 1,621 (1,621/1,621)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167719)
HIX0167719
HIT000657923 (
NR_029420
)
(Conserved hypothetical protein.)
genome : 56,491,397 - 56,516,068 (24,672)
query : 1 - 1,667 (1,667/1,667)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, extr 7, nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167719)
HIX0167719
HIT000541132 (
ENST00000443198
)
(Conserved hypothetical protein.)
genome : 56,494,552 - 56,516,068 (21,517)
query : 1 - 580 (580/580)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167719)
HIX0168432
HIT000094324
(
BC036258
)
Representative transcript
(Hypothetical protein.)
genome : 56,549,799 - 56,550,988 (1,190)
query : 1 - 672 (672/687)
2 exons
identity = 0.997
3'(0.997;0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168432)
HIX0168432
HIT000533976 (
ENST00000436042
)
(Hypothetical protein.)
genome : 56,549,798 - 56,550,988 (1,191)
query : 1 - 673 (673/673)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168432)
HIX0168345
HIT000528582 (
ENST00000430648
)
(Conserved hypothetical protein.)
genome : 56,558,375 - 56,559,328 (954)
query : 1 - 954 (954/954)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 5.5, cyto 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168345)
HIX0006706
HIT000679605 (
ENST00000566570
)
(Conserved hypothetical protein.)
genome : 56,560,817 - 56,564,978 (4,162)
query : 1 - 4,162 (4,162/4,162)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 14, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006706)
HIX0006706
HIT000026697
(
AL713776
)
Representative transcript
(Conserved hypothetical protein.)
genome : 56,563,916 - 56,564,970 (1,055)
query : 1 - 1,054 (1,054/1,079)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, extr 10, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006706)
HIX0006706
HIT000563104 (
NR_026929
)
(Conserved hypothetical protein.)
genome : 56,563,916 - 56,564,977 (1,062)
query : 1 - 1,062 (1,062/1,068)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, nucl 10.5, cyto 8.5, mito_nucl 8.5,
extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006706)
HIX0168231
HIT000519749 (
ENST00000421815
)
(Conserved hypothetical protein.)
genome : 56,569,977 - 56,570,737 (761)
query : 1 - 761 (761/761)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168231)
HIX0168282
HIT000523961 (
ENST00000426027
)
(Conserved hypothetical protein.)
genome : 56,593,121 - 56,593,806 (686)
query : 1 - 686 (686/686)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168282)
HIX0033924
HIT000093754
(
BC035176
)
Representative transcript
(Conserved hypothetical protein.)
genome : 56,601,923 - 56,605,823 (3,901)
query : 6 - 2,746 (2,741/2,787)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 7, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033924)
HIX0033924
HIT000527301 (
ENST00000429367
)
(Conserved hypothetical protein.)
genome : 56,601,923 - 56,605,823 (3,901)
query : 1 - 2,741 (2,741/2,741)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 5, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033924)
HIX0123923
HIT000453386
(
DQ586855
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,608,408 - 56,608,436 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123923)
HIX0168559
HIT000541319 (
ENST00000443385
)
(Vomeronasal receptor, type 1 family protein.)
genome : 56,626,914 - 56,627,651 (738)
query : 1 - 738 (738/738)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168559)
HIX0124450
HIT000533421 (
ENST00000435487
)
(14-3-3 protein family protein.)
genome : 56,635,599 - 56,636,551 (953)
query : 1 - 669 (669/669)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12.5, nucl 6.5, extr 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0124450)
HIX0168105
HIT000512512 (
ENST00000414578
)
(Krueppel-associated box domain containing protein.)
genome : 56,645,541 - 56,646,559 (1,019)
query : 1 - 210 (210/210)
2 exons
identity = 0.976
5'(1.000;0.948)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 6.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168105)
HIX0122210
HIT000134485 (
ENST00000341855
)
(K Homology domain, type 1 containing protein.)
genome : 56,665,072 - 56,666,035 (964)
query : 1 - 964 (964/964)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, cyto_nucl 10.5, mito 7, extr 6, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0122210)
HIX0217898
HIT000706629_02 (
ENST00000594829
)
(Protein of unknown function DUF4535 family protein.)
genome : 56,671,103 - 56,671,246 (144)
query : 1 - 144 (144/144)
1 exon
identity = 0.965
5'(0.965)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, mito 10, cyto_nucl 10, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217898)
HIX0168567
HIT000541982 (
ENST00000444048
)
(Conserved hypothetical protein.)
genome : 56,699,432 - 56,700,420 (989)
query : 1 - 694 (694/694)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, extr 9, nucl 4.5,
extr_plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168567)
HIX0168324
HIT000527182 (
ENST00000429248
)
(Krueppel-associated box domain containing protein.)
genome : 56,706,636 - 56,718,389 (11,754)
query : 1 - 1,591 (1,591/1,591)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168324)
HIX0207870
eHIT000021929 ( ESTsASS_7_490 )
Representative transcript
(Non-protein coding transcript.)
genome : 56,727,231 - 56,742,781 (15,551)
query : 1 - 337 (337/337)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207870)
ESTs used for assembly :
AA917777
HIX0025304
HIT000045663
(
AK125790
)
Representative transcript
(Conserved hypothetical protein.)
genome : 56,876,817 - 56,880,429 (3,613)
query : 1 - 3,612 (3,612/3,612)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11.5, cyto_mito 8.16667, nucl 4,
cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025304)
HIX0025304
HIT000047987
(
AK128114
)
(Conserved hypothetical protein.)
genome : 56,876,817 - 56,880,170 (3,354)
query : 1 - 3,354 (3,354/3,354)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11.5, cyto_mito 8.16667, nucl 4,
cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025304)
HIX0025304
HIT000501326
(
BC137417
)
(Conserved hypothetical protein.)
genome : 56,877,972 - 56,880,164 (2,193)
query : 1 - 2,192 (2,192/2,192)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11.5, cyto_mito 8.16667, nucl 4,
cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025304)
HIX0025304
HIT000460988
(
DQ594457
)
(Non-protein coding transcript.)
genome : 56,878,003 - 56,878,031 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025304)
HIX0025304
HIT000722404
(
JX508854
)
(Conserved hypothetical protein.)
genome : 56,879,492 - 56,880,139 (648)
query : 1 - 648 (648/648)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11.5, cyto_mito 8.16667, nucl 4,
cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025304)
HIX0217746
HIT000711125_01 (
ENST00000599370
)
(Hypothetical protein.)
genome : 56,881,183 - 56,892,966 (11,784)
query : 1 - 651 (651/651)
2 exons
identity = 0.995
3'(0.989;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 11, cyto_nucl 4.16667, nucl 3.5,
cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217746)
HIX0217746
HIT000706498 (
ENST00000594697
)
(Conserved hypothetical protein.)
genome : 56,881,183 - 56,883,671 (2,489)
query : 1 - 648 (648/648)
2 exons
identity = 0.995
3'(1.000;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 10.5, cyto_mito 7.66667, nucl 4,
cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217746)
HIX0217901
HIT000710900 (
ENST00000599140
)
(Conserved hypothetical protein.)
genome : 56,884,715 - 56,885,557 (843)
query : 1 - 648 (648/648)
2 exons
identity = 0.995
3'(1.000;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 11, cyto_nucl 4.66667, nucl 4.5,
cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217901)
HIX0217747
HIT000709620_01 (
ENST00000597845
)
(Hypothetical protein.)
genome : 56,886,601 - 56,889,377 (2,777)
query : 1 - 648 (648/648)
2 exons
identity = 0.995
3'(1.000;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 12, nucl 4, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217747)
HIX0217747
HIT000710447 (
ENST00000598683
)
(Conserved hypothetical protein.)
genome : 56,886,601 - 56,887,395 (795)
query : 1 - 648 (648/648)
2 exons
identity = 0.995
3'(1.000;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 10.5, cyto_mito 7.66667, nucl 4,
cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217747)
HIX0217747
HIT000713287 (
ENST00000601550
)
(Conserved hypothetical protein.)
genome : 56,886,601 - 56,887,395 (795)
query : 1 - 651 (651/651)
2 exons
identity = 0.998
3'(1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 11, nucl 4, cyto 3, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217747)
HIX0167949
HIT000450463_09
(
DQ583932
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,896,262 - 56,896,291 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167949)
HIX0167957
HIT000451502_15
(
DQ584971
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,897,220 - 56,897,249 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167957)
HIX0167989
HIT000459005_10
(
DQ592474
)
(Non-protein coding transcript.)
genome : 56,897,334 - 56,897,363 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167989)
HIX0167989
HIT000466330_10
(
DQ599799
)
(Non-protein coding transcript.)
genome : 56,897,334 - 56,897,363 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167989)
HIX0167989
HIT000460021_17
(
DQ593490
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,897,335 - 56,897,364 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167989)
HIX0167930
HIT000442993_11
(
DQ576462
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,897,408 - 56,897,437 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167930)
HIX0167955
HIT000451470_11
(
DQ584939
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,897,475 - 56,897,505 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167955)
HIX0207816
HIT000441190_10
(
DQ574659
)
(Non-protein coding transcript.)
genome : 56,897,834 - 56,897,864 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207816)
HIX0207816
HIT000441191_10
(
DQ574660
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,897,833 - 56,897,864 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207816)
HIX0207816
HIT000441189_10
(
DQ574658
)
(Non-protein coding transcript.)
genome : 56,897,834 - 56,897,864 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207816)
HIX0167942
HIT000444919_05
(
DQ578388
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,898,437 - 56,898,468 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167942)
HIX0167951
HIT000451103_03
(
DQ584572
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,899,646 - 56,899,677 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167951)
HIX0167927
HIT000442954_03
(
DQ576423
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,899,918 - 56,899,949 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167927)
HIX0167932
HIT000443383_03
(
DQ576852
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,900,785 - 56,900,816 (32)
query : 1 - 32 (32/32)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167932)
HIX0123680
HIT000443839
(
DQ577308
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,900,871 - 56,900,901 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123680)
HIX0167946
HIT000447366_05
(
DQ580835
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,940,427 - 56,940,457 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167946)
HIX0167684
HIT000546176 (
ENST00000448242
)
(Calcium/calmodulin-dependent/calcium-dependent protein kinase family protein.)
genome : 56,943,078 - 56,949,839 (6,762)
query : 1 - 564 (564/564)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 6.5, cyto_nucl 6, mito 3, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167684)
HIX0167684
HIT000660382 (
NR_038450
)
(Conserved hypothetical protein.)
genome : 56,943,078 - 56,949,839 (6,762)
query : 1 - 564 (564/564)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167684)
HIX0167684
HIT000680798 (
ENST00000567800
)
(Calcium/calmodulin-dependent/calcium-dependent protein kinase family protein.)
genome : 56,943,078 - 56,949,839 (6,762)
query : 1 - 564 (564/564)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 6.5, cyto_nucl 6, mito 3, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167684)
HIX0167684
HIT000552653 (
ENST00000454719
)
(Conserved hypothetical protein.)
genome : 56,944,193 - 56,945,245 (1,053)
query : 1 - 225 (225/225)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 11, cyto 2.5, cyto_nucl 2.5, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167684)
HIX0167684
HIT000680790 (
ENST00000567792
)
(Conserved hypothetical protein.)
genome : 56,944,193 - 56,945,245 (1,053)
query : 1 - 225 (225/225)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 11, cyto 2.5, cyto_nucl 2.5, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167684)
HIX0167684
HIT000452500_03
(
DQ585969
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,945,191 - 56,945,221 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167684)
HIX0168461
HIT000535964_01 (
ENST00000438030
)
(Hypothetical protein.)
genome : 57,008,048 - 57,012,060 (4,013)
query : 1 - 544 (544/544)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28.5, extr_plas 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168461)
HIX0168461
HIT000680500_01 (
ENST00000567492
)
(Hypothetical protein.)
genome : 57,008,048 - 57,012,060 (4,013)
query : 1 - 544 (544/544)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28.5, extr_plas 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168461)
HIX0207861
HIT000659509_01 (
NR_036246
)
(Non-protein coding transcript.)
genome : 57,023,492 - 57,023,571 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207861)
HIX0207861
HIT000659533_01 (
NR_036270
)
(Non-protein coding transcript.)
genome : 57,023,492 - 57,023,571 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207861)
HIX0207861
HIT000690916_01 (
ENST00000578980
)
(Non-protein coding transcript.)
genome : 57,023,492 - 57,023,571 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207861)
HIX0207861
HIT000694843_01 (
ENST00000582960
)
(Non-protein coding transcript.)
genome : 57,023,492 - 57,023,571 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207861)
HIX0207861
HIT000694900_01 (
ENST00000583019
)
(Non-protein coding transcript.)
genome : 57,023,492 - 57,023,571 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207861)
HIX0034162
HIT000539830 (
ENST00000441896
)
(Conserved hypothetical protein.)
genome : 57,059,595 - 57,076,856 (17,262)
query : 1 - 2,691 (2,691/2,691)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto 10, extr 3, mito 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034162)
HIX0034162
HIT000677187 (
ENST00000564052
)
(Conserved hypothetical protein.)
genome : 57,059,595 - 57,076,856 (17,262)
query : 1 - 2,691 (2,691/2,691)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto 10, extr 3, mito 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034162)
HIX0124474
HIT000481910 (
ENST00000398760
)
(Equilibrative nucleoside transporter family protein.)
genome : 57,081,992 - 57,087,980 (5,989)
query : 1 - 971 (971/971)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0124474)
HIX0124474
HIT000676829 (
ENST00000563685
)
(Equilibrative nucleoside transporter family protein.)
genome : 57,081,992 - 57,087,980 (5,989)
query : 1 - 971 (971/971)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0124474)
HIX0217982
HIT000524529 (
ENST00000426595
)
(Ribosomal protein S17 family protein.)
genome : 55,954,970 - 56,022,932 (67,963)
query : 1 - 1,732 (1,732/1,732)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217982)
HIX0022578
HIT000544626 (
ENST00000446692
)
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,019,486 - 56,052,570 (33,085)
query : 1 - 662 (662/662)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 12, extr 10, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0022578
HIT000198457 (
NM_001483
)
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,032,270 - 56,067,875 (35,606)
query : 1 - 2,004 (2,004/2,019)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, cyto_mito 15.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0022578
HIT000656864 (
NM_001202469
)
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,032,270 - 56,067,875 (35,606)
query : 1 - 1,887 (1,887/1,902)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 1, cyto 1, cyto_nucl 1, pero 1,
cyto_pero 1, cysk_plas 1
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0022578
HIT000123011 (
ENST00000322090
)
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,032,274 - 56,067,874 (35,601)
query : 1 - 1,999 (1,999/1,999)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, cyto_mito 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0022578
HIT000544712 (
ENST00000446778
)
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,032,274 - 56,067,874 (35,601)
query : 1 - 1,882 (1,882/1,882)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 1, cyto 1, cyto_nucl 1, pero 1,
cyto_pero 1, cysk_plas 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0022578
HIT000021904
(
AK097049
)
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,032,284 - 56,067,803 (35,520)
query : 1 - 1,801 (1,801/1,801)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
InterPro :
IPR011008 : Dimeric alpha-beta barrel
IPR012577 : NIPSNAP
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 1, cyto 1, cyto_nucl 1, pero 1,
cyto_pero 1, cysk_plas 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0022578
HIT000434514
(
AK315648
)
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,032,284 - 56,066,765 (34,482)
query : 1 - 879 (879/879)
10 exons
identity = 0.999
5'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011008 : Dimeric alpha-beta barrel
IPR012577 : NIPSNAP
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, cyto_mito 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0022578
HIT000041155
(
BC030821
)
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,032,288 - 56,067,801 (35,514)
query : 1 - 1,912 (1,912/1,943)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR011008 : Dimeric alpha-beta barrel
IPR012577 : NIPSNAP
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, cyto_mito 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0022578
HIT000062996
(
AF029786
)
Representative transcript
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,032,296 - 56,067,871 (35,576)
query : 2 - 1,975 (1,974/1,975)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 0.999
InterPro :
IPR011008 : Dimeric alpha-beta barrel
IPR012577 : NIPSNAP
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, cyto_mito 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AJ001261
Gallus
sp. (Chicken) : AJ720622
Rattus
sp. (Rat) : BC086385
Bos
sp. (Cow) : BC104622
Tetraodon
sp. (Tetraodon) : CR696796
Tetraodon
sp. (Tetraodon) : CR728244
Danio
sp. (Zebrafish) : ENSDART00000102302
Oryzias
sp. (Medaka) : ENSORLT00000009802
Pongo
sp. (Orangutan) : ENSPPYT00000020442
Takifugu
sp. (Fugu) : SINFRUT00000148523
Takifugu
sp. (Fugu) : SINFRUT00000162590
Pan
sp. (Chimpanzee) : XM_001158461
Monodelphis
sp. (Opossum) : XM_001364276
Equus
sp. (Horse) : XM_001493226
Canis
sp. (Dog) : XM_850616
Macaca
sp. (Macaque) : XR_013181
HIX0022578
HIT000029877
(
BC000732
)
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,032,297 - 56,067,872 (35,576)
query : 1 - 1,963 (1,963/2,005)
10 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.990)3'
coverage = 1.000
InterPro :
IPR011008 : Dimeric alpha-beta barrel
IPR012577 : NIPSNAP
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, cyto_mito 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0022578
HIT000030686
(
BC001837
)
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,032,297 - 56,067,872 (35,576)
query : 1 - 1,963 (1,963/2,005)
10 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.990)3'
coverage = 1.000
InterPro :
IPR011008 : Dimeric alpha-beta barrel
IPR012577 : NIPSNAP
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, cyto_mito 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0022578
HIT000554138 (
ENST00000456204
)
(Protein NipSnap homolog 2 isoform 2.)
genome : 56,032,299 - 56,051,505 (19,207)
query : 1 - 660 (660/660)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, extr 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0022578
HIT000243849
(
AJ001259
)
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,032,300 - 56,067,873 (35,574)
query : 1 - 1,978 (1,978/1,978)
10 exons
identity = 0.976
5'(0.958;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.963)3'
coverage = 1.000
InterPro :
IPR011008 : Dimeric alpha-beta barrel
IPR012577 : NIPSNAP
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, cyto_mito 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0022578
HIT000100032
(
BT007112
)
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,032,303 - 56,066,764 (34,462)
query : 1 - 860 (860/861)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR011008 : Dimeric alpha-beta barrel
IPR012577 : NIPSNAP
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, cyto_mito 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0022578
HIT000267109
(
CR407612
)
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,032,303 - 56,066,762 (34,460)
query : 1 - 858 (858/858)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011008 : Dimeric alpha-beta barrel
IPR012577 : NIPSNAP
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, cyto_mito 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0022578
HIT000535521 (
ENST00000437587
)
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,032,655 - 56,062,631 (29,977)
query : 1 - 818 (818/818)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 13.5, extr 9, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0022578
HIT000591076 (
ENST00000487370
)
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,032,691 - 56,049,196 (16,506)
query : 1 - 494 (494/494)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 10, nucl 5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0022578
HIT000576780 (
ENST00000472404
)
(Protein NipSnap homolog 2; NipSnap2; Glioblastoma-amplified sequence;)
genome : 56,032,806 - 56,049,191 (16,386)
query : 1 - 250 (250/250)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 10, nucl 6, E.R._mito 6, mito_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022578)
HIX0188540
pHIT000013028 ( pHIT000013028 )
Representative transcript
(Hypothetical protein.)
genome : 55,543,081 - 55,554,825 (11,745)
query : 1 - 708 (708/708)
5 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188540)
CAGE tag :
H04BA54L0609,H04BA78G0903,H04BA86O2203
H05BB10P1606,H05BC69B0610
HIX0187507
pHIT000013034 ( pHIT000013034 )
Representative transcript
(Conserved hypothetical protein.)
genome : 55,799,837 - 55,800,124 (288)
query : 1 - 288 (288/288)
1 exon
InterPro :
IPR000626 : Ubiquitin-like
IPR022617 : Rad60/SUMO-like domain
IPR027218 : Small ubiquitin-related modifier, chordates
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0016925 : Biological Process : protein sumoylation
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0187507)
CAGE tag :
H08BA06K0406,H08BA14L1702,H22BA65H1015
H22BB06D1503,H39BB09I2004
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC075956
HIX0207870
eHIT000021929 ( ESTsASS_7_490 )
Representative transcript
(Non-protein coding transcript.)
genome : 56,727,231 - 56,742,781 (15,551)
query : 1 - 337 (337/337)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207870)
ESTs used for assembly :
AA917777
AC073347.3
55500001-55577381 F +
NCBI
AC073237.3
55577382-55629672 F +
NCBI
AC099681.4
55629673-55727459 F +
NCBI
AC091812.4
55727460-55846423 F +
NCBI
AC092647.2
55846424-56008314 F +
NCBI
AC092579.3
56008315-56125272 F +
NCBI
AC092101.5
56125273-56164147 F +
NCBI
AC006970.6
56164148-56298054 F +
NCBI
AC073136.6
56298055-56376850 F +
NCBI
AC093392.4
56376851-56474447 F +
NCBI
AC092423.5
56474448-56497382 F +
NCBI
AC092447.5
56497383-56671929 F +
NCBI
AC095038.3
56671930-56835595 F +
NCBI
AC118758.3
56835596-56949354 F +
NCBI
AC142456.2
56949355-56987924 F +
NCBI
AC160848.1
56987925-57001476 P -
NCBI
AC122133.4
57001477-57100000 F +
NCBI