bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0168461
HIT000535964_01 (
ENST00000438030
)
(Hypothetical protein.)
genome : 57,008,048 - 57,012,060 (4,013)
query : 1 - 544 (544/544)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28.5, extr_plas 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168461)
HIX0168461
HIT000680500_01 (
ENST00000567492
)
(Hypothetical protein.)
genome : 57,008,048 - 57,012,060 (4,013)
query : 1 - 544 (544/544)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28.5, extr_plas 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168461)
HIX0207861
HIT000659509_01 (
NR_036246
)
(Non-protein coding transcript.)
genome : 57,023,492 - 57,023,571 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207861)
HIX0207861
HIT000659533_01 (
NR_036270
)
(Non-protein coding transcript.)
genome : 57,023,492 - 57,023,571 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207861)
HIX0207861
HIT000690916_01 (
ENST00000578980
)
(Non-protein coding transcript.)
genome : 57,023,492 - 57,023,571 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207861)
HIX0207861
HIT000694843_01 (
ENST00000582960
)
(Non-protein coding transcript.)
genome : 57,023,492 - 57,023,571 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207861)
HIX0207861
HIT000694900_01 (
ENST00000583019
)
(Non-protein coding transcript.)
genome : 57,023,492 - 57,023,571 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207861)
HIX0034162
HIT000539830 (
ENST00000441896
)
(Conserved hypothetical protein.)
genome : 57,059,595 - 57,076,856 (17,262)
query : 1 - 2,691 (2,691/2,691)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto 10, extr 3, mito 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034162)
HIX0034162
HIT000677187 (
ENST00000564052
)
(Conserved hypothetical protein.)
genome : 57,059,595 - 57,076,856 (17,262)
query : 1 - 2,691 (2,691/2,691)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto 10, extr 3, mito 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034162)
HIX0124474
HIT000481910 (
ENST00000398760
)
(Equilibrative nucleoside transporter family protein.)
genome : 57,081,992 - 57,087,980 (5,989)
query : 1 - 971 (971/971)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0124474)
HIX0124474
HIT000676829 (
ENST00000563685
)
(Equilibrative nucleoside transporter family protein.)
genome : 57,081,992 - 57,087,980 (5,989)
query : 1 - 971 (971/971)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0124474)
HIX0167744
HIT000528078 (
ENST00000430144
)
(Phosphorylase kinase, gamma catalytic subunit family protein.)
genome : 57,128,297 - 57,129,008 (712)
query : 1 - 370 (370/370)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 19, plas 5.5, extr_plas 4, cyto 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167744)
HIX0167744
HIT000679993 (
ENST00000566970
)
(Phosphorylase kinase, gamma catalytic subunit family protein.)
genome : 57,128,297 - 57,129,008 (712)
query : 1 - 370 (370/370)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 19, plas 5.5, extr_plas 4, cyto 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167744)
HIX0033546
HIT000076006
(
AF277624
)
Representative transcript
(Zinc finger protein 479; Zinc finger protein Kr19; HKr19;)
genome : 57,187,321 - 57,207,571 (20,251)
query : 1 - 2,072 (2,072/2,072)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033546)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK220544
Monodelphis
sp. (Opossum) : ENSMODT00000031725
Pongo
sp. (Orangutan) : ENSPPYT00000020435
Pan
sp. (Chimpanzee) : ENSPTRT00000044625
HIX0033546
HIT000127074 (
ENST00000331162
)
(Zinc finger protein 479; Zinc finger protein Kr19; HKr19;)
genome : 57,187,321 - 57,207,571 (20,251)
query : 1 - 2,072 (2,072/2,072)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033546)
HIX0033546
HIT000486269 (
NM_033273
)
(Zinc finger protein 479; Zinc finger protein Kr19; HKr19;)
genome : 57,187,321 - 57,207,571 (20,251)
query : 1 - 2,072 (2,072/2,072)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033546)
HIX0033546
HIT000682326 (
ENST00000569383
)
(Zinc finger protein 479; Zinc finger protein Kr19; HKr19;)
genome : 57,187,321 - 57,207,571 (20,251)
query : 1 - 2,072 (2,072/2,072)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033546)
HIX0201249
HIT000530965 (
ENST00000433031
)
(Conserved hypothetical protein.)
genome : 57,215,693 - 57,218,054 (2,362)
query : 1 - 1,980 (1,980/1,980)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 7.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201249)
HIX0207824
HIT000658478 (
NR_030766
)
(Glycosyl hydrolases family 2, sugar binding domain containing protein.)
genome : 57,233,377 - 57,247,863 (14,487)
query : 1 - 978 (978/978)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 5.33333, mito 5, cyto_pero 4.66667,
mito_nucl 4.66667, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207824)
HIX0168744
HIT000553846 (
ENST00000455912
)
(Cytochrome c oxidase subunit III domain containing protein.)
genome : 57,235,587 - 57,236,358 (772)
query : 1 - 772 (772/772)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24.5, extr_plas 13.5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168744)
HIX0168482
HIT000536967 (
ENST00000439033
)
(NADH:ubiquinone oxidoreductase family protein.)
genome : 57,237,113 - 57,238,478 (1,366)
query : 1 - 1,366 (1,366/1,366)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, plas 7, pero 5, cyto_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168482)
HIX0168239
HIT000520272 (
ENST00000422338
)
(NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit domain containing protein.)
genome : 57,238,681 - 57,240,478 (1,798)
query : 1 - 1,798 (1,798/1,798)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, extr 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168239)
HIX0168438
HIT000534261 (
ENST00000436327
)
(Conserved hypothetical protein.)
genome : 57,241,064 - 57,242,069 (1,006)
query : 1 - 1,006 (1,006/1,006)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, cyto_mito 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168438)
HIX0207824
HIT000515346 (
ENST00000417412
)
(Glycosyl hydrolases family 2, sugar binding domain containing protein.)
genome : 57,245,116 - 57,247,759 (2,644)
query : 1 - 665 (665/665)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 12, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207824)
HIX0168419
HIT000533130 (
ENST00000435196
)
(NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H family protein.)
genome : 57,253,495 - 57,253,909 (415)
query : 1 - 415 (415/415)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9, extr 8, cyto 8, cysk 8, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168419)
HIX0168733
HIT000472961_03 (
ENST00000387377
)
(Non-protein coding transcript.)
genome : 57,254,054 - 57,254,120 (67)
query : 2 - 68 (67/68)
1 exon
identity = 0.970
5'(0.970)3'
coverage = 0.985
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168733)
HIX0168733
HIT000436532_05
(
DQ570001
)
Representative transcript
(Non-protein coding transcript.)
genome : 57,254,093 - 57,254,120 (28)
query : 1 - 28 (28/30)
1 exon
identity = 0.964
5'(0.964)3'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168733)
HIX0168733
HIT000553271 (
ENST00000455337
)
(Hypothetical protein.)
genome : 57,254,119 - 57,255,148 (1,030)
query : 1 - 1,030 (1,030/1,030)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, nucl 12, cyto 11, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168733)
HIX0168607
HIT000545021 (
ENST00000447087
)
(Cytochrome c oxidase, subunit I domain containing protein.)
genome : 57,255,599 - 57,257,847 (2,249)
query : 1 - 2,249 (2,249/2,249)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168607)
HIX0168182
HIT000517170 (
ENST00000419236
)
(Cytochrome c oxidase subunit III domain containing protein.)
genome : 57,258,848 - 57,259,634 (787)
query : 1 - 787 (787/787)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23.5, extr_plas 13, mito 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168182)
HIX0168427
HIT000533755 (
ENST00000435821
)
(Hypothetical protein.)
genome : 57,260,401 - 57,261,775 (1,375)
query : 1 - 1,375 (1,375/1,375)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15.5, extr 14, mito_pero 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168427)
HIX0168092
HIT000511492 (
ENST00000413558
)
(NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit domain containing protein.)
genome : 57,261,964 - 57,263,761 (1,798)
query : 1 - 1,798 (1,798/1,798)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168092)
HIX0168254
HIT000521686 (
ENST00000423752
)
(Cytochrome b/b6, N-terminal domain containing protein.)
genome : 57,264,345 - 57,265,479 (1,135)
query : 1 - 1,135 (1,135/1,135)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
lyso 11, E.R. 8.5, plas 8, E.R._mito 7.5, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168254)
HIX0207823
HIT000510846 (
ENST00000412912
)
(Glycosyl hydrolases family 2, sugar binding domain containing protein.)
genome : 57,268,518 - 57,269,534 (1,017)
query : 1 - 525 (525/540)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.972
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 8.5, extr 4, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207823)
HIX0207823
HIT000613277 (
ENST00000513727
)
(Glycosyl hydrolases family 2, sugar binding domain containing protein.)
genome : 57,268,532 - 57,271,304 (2,773)
query : 1 - 720 (720/720)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 10, nucl 9, extr 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207823)
HIX0187402
HIT000540583 (
ENST00000442649
)
(Hypothetical short protein.)
genome : 57,277,572 - 57,289,866 (12,295)
query : 1 - 407 (407/407)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0187402)
HIX0187402
HIT000513770 (
ENST00000415836
)
(Hypothetical short protein.)
genome : 57,288,876 - 57,289,881 (1,006)
query : 1 - 564 (564/564)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0187402)
HIX0025418
HIT000047883
(
AK128010
)
Representative transcript
(Conserved hypothetical protein.)
genome : 57,469,885 - 57,472,423 (2,539)
query : 1 - 2,539 (2,539/2,539)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025418)
HIX0208128
HIT000659366 (
NR_036102
)
(Non-protein coding transcript.)
genome : 57,472,731 - 57,472,796 (66)
query : 1 - 66 (66/66)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208128)
HIX0208128
HIT000689643 (
ENST00000577693
)
(Non-protein coding transcript.)
genome : 57,472,731 - 57,472,796 (66)
query : 1 - 66 (66/66)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208128)
HIX0208128
HIT000689761 (
ENST00000577811
)
(Non-protein coding transcript.)
genome : 57,472,731 - 57,472,796 (66)
query : 1 - 66 (66/66)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208128)
HIX0151888
HIT000465004
(
DQ598473
)
(Non-protein coding transcript.)
genome : 57,476,014 - 57,476,043 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0151888)
HIX0151888
HIT000445451
(
DQ578920
)
Representative transcript
(Non-protein coding transcript.)
genome : 57,476,015 - 57,476,044 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0151888)
HIX0168691
HIT000550451 (
ENST00000452517
)
(Vomeronasal receptor, type 1 family protein.)
genome : 57,482,534 - 57,483,429 (896)
query : 1 - 896 (896/896)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, plas 5, extr 3, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168691)
HIX0168691
HIT000677545 (
ENST00000564422
)
(Vomeronasal receptor, type 1 family protein.)
genome : 57,482,534 - 57,483,429 (896)
query : 1 - 896 (896/896)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, plas 5, extr 3, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168691)
HIX0168358
HIT000529653 (
ENST00000431719
)
(Adenomatous polyposis coli domain containing protein.)
genome : 57,484,207 - 57,485,380 (1,174)
query : 1 - 1,174 (1,174/1,174)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 14.5, cyto 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168358)
HIX0168358
HIT000681137 (
ENST00000568152
)
(Adenomatous polyposis coli domain containing protein.)
genome : 57,484,207 - 57,485,380 (1,174)
query : 1 - 1,174 (1,174/1,174)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 11, nucl 10.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168358)
HIX0033590
HIT000249863
(
AK131575
)
Representative transcript
(Zinc finger protein 679.)
genome : 57,509,883 - 57,533,265 (23,383)
query : 1 - 3,946 (3,946/3,946)
5 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033590)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC060708
Danio
sp. (Zebrafish) : BC153971
Monodelphis
sp. (Opossum) : ENSMODT00000013557
Equus
sp. (Horse) : XM_001495144
Pan
sp. (Chimpanzee) : XM_527754
HIX0033590
HIT000561731 (
NM_001159279
)
(Zinc finger protein 679.)
genome : 57,509,883 - 57,533,265 (23,383)
query : 1 - 5,210 (5,210/5,210)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033590)
HIX0033590
HIT000518647 (
ENST00000420713
)
(Zinc finger protein 679.)
genome : 57,509,883 - 57,533,252 (23,370)
query : 1 - 5,197 (5,197/5,197)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033590)
HIX0033590
HIT000683120 (
ENST00000570211
)
(Zinc finger protein 679.)
genome : 57,509,883 - 57,533,252 (23,370)
query : 1 - 5,197 (5,197/5,197)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033590)
HIX0168207
HIT000681588_01 (
ENST00000568614
)
(Hypothetical protein.)
genome : 57,641,311 - 57,669,978 (28,668)
query : 1 - 583 (583/583)
3 exons
identity = 0.952
5'(0.955;0.955;0.950)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 14.5, nucl 12.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168207)
HIX0168207
HIT000691894_01 (
ENST00000579974
)
(Hypothetical protein.)
genome : 57,659,458 - 57,669,871 (10,414)
query : 1 - 406 (406/406)
2 exons
identity = 0.953
5'(0.947;0.957)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168207)
HIX0168207
HIT000518413 (
ENST00000420479
)
(Conserved hypothetical protein.)
genome : 57,659,500 - 57,669,810 (10,311)
query : 1 - 303 (303/303)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 6.5, cyto 5.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168207)
HIX0167752
HIT000534456 (
ENST00000436522
)
(Conserved hypothetical protein.)
genome : 57,679,619 - 57,689,962 (10,344)
query : 1 - 233 (233/233)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 8.5, cyto_nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167752)
HIX0167752
HIT000611073 (
ENST00000511350
)
(Conserved hypothetical protein.)
genome : 57,689,744 - 57,696,916 (7,173)
query : 1 - 342 (342/342)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11.8333, extr 10,
cyto_pero 7.16667, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167752)
HIX0168434
HIT000534010 (
ENST00000436076
)
(Conserved hypothetical protein.)
genome : 57,698,431 - 57,698,818 (388)
query : 1 - 388 (388/388)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168434)
HIX0167960
HIT000452649_04
(
DQ586118
)
Representative transcript
(Non-protein coding transcript.)
genome : 57,705,874 - 57,705,903 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167960)
HIX0123857
HIT000450584
(
DQ584053
)
Representative transcript
(Non-protein coding transcript.)
genome : 57,707,029 - 57,707,059 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123857)
HIX0168220
HIT000519155 (
ENST00000421221
)
(Conserved hypothetical protein.)
genome : 57,710,087 - 57,710,825 (739)
query : 1 - 201 (201/201)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 6, cyto_nucl 5.66667, cyto_pero 4.66667,
mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168220)
HIX0168517
HIT000538552 (
ENST00000440618
)
(Conserved hypothetical protein.)
genome : 57,710,227 - 57,710,560 (334)
query : 1 - 334 (334/334)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168517)
HIX0168585
HIT000543394 (
ENST00000445460
)
(Conserved hypothetical protein.)
genome : 57,712,442 - 57,713,165 (724)
query : 1 - 196 (196/196)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 10, nucl 8, cyto 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168585)
HIX0168546
HIT000540114 (
ENST00000442180
)
(Conserved hypothetical protein.)
genome : 57,712,581 - 57,712,914 (334)
query : 1 - 334 (334/334)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 13, nucl 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168546)
HIX0123663
HIT000509369 (
ENST00000411435
)
(Conserved hypothetical protein.)
genome : 57,714,528 - 57,715,098 (571)
query : 1 - 571 (571/571)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 10.5, cyto_nucl 6.83333, extr 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123663)
HIX0123663
HIT000443343
(
DQ576812
)
Representative transcript
(Non-protein coding transcript.)
genome : 57,714,977 - 57,715,006 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123663)
HIX0168068
HIT000509965 (
ENST00000412031
)
(Conserved hypothetical protein.)
genome : 57,830,325 - 57,830,652 (328)
query : 1 - 328 (328/328)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 8, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168068)
HIX0168549
HIT000540488 (
ENST00000442554
)
(Conserved hypothetical protein.)
genome : 57,830,672 - 57,830,879 (208)
query : 1 - 208 (208/208)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10, cyto_nucl 9, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168549)
HIX0168781
HIT000556519 (
ENST00000458585
)
(Conserved hypothetical protein.)
genome : 57,832,290 - 57,832,905 (616)
query : 1 - 616 (616/616)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto_nucl 8.83333, cyto 8.5,
cyto_pero 5.33333, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168781)
HIX0208092
HIT000612062_01 (
ENST00000512399
)
(Hypothetical protein.)
genome : 57,832,889 - 57,833,087 (199)
query : 1 - 199 (199/199)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 10.5, cyto_nucl 7.5, extr 5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208092)
HIX0168641
HIT000547072 (
ENST00000449138
)
(Conserved hypothetical protein.)
genome : 57,836,678 - 57,837,227 (550)
query : 1 - 550 (550/550)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9.5, extr_plas 7.5, cyto 5, plas 4.5,
cyto_nucl 4.5, pero 4.5, nucl 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168641)
HIX0168783
HIT000556668 (
ENST00000458734
)
(Conserved hypothetical protein.)
genome : 57,877,307 - 57,877,718 (412)
query : 1 - 412 (412/412)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168783)
HIX0208088
HIT000608769_01 (
ENST00000508864
)
(Hypothetical protein.)
genome : 57,877,702 - 57,877,903 (202)
query : 1 - 202 (202/202)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 7, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208088)
HIX0168445
HIT000534632 (
ENST00000436698
)
(Conserved hypothetical protein.)
genome : 57,879,525 - 57,880,333 (809)
query : 1 - 278 (278/278)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 12, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168445)
HIX0168187
HIT000517352 (
ENST00000419418
)
(Conserved hypothetical protein.)
genome : 57,879,738 - 57,880,116 (379)
query : 1 - 379 (379/379)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 10.5, extr 8, cyto 6.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168187)
HIX0168119
HIT000513568 (
ENST00000415634
)
(Conserved hypothetical protein.)
genome : 57,881,907 - 57,882,648 (742)
query : 1 - 200 (200/200)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.1667, extr 9, nucl 8, cyto 8, mito 6,
cyto_pero 5.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168119)
HIX0168329
HIT000710354 (
ENST00000598588
)
(Conserved hypothetical protein.)
genome : 57,882,150 - 57,882,506 (357)
query : 1 - 357 (357/357)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 10, cyto 4, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168329)
HIX0168329
HIT000527352 (
ENST00000429418
)
(Conserved hypothetical protein.)
genome : 57,882,171 - 57,882,507 (337)
query : 1 - 337 (337/337)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 10, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168329)
HIX0168344
HIT000528580 (
ENST00000430646
)
(Conserved hypothetical protein.)
genome : 57,888,037 - 57,896,752 (8,716)
query : 1 - 407 (407/407)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 7, cyto 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168344)
HIX0168344
HIT000695982_01 (
ENST00000584107
)
(Hypothetical protein.)
genome : 57,894,982 - 57,896,753 (1,772)
query : 1 - 529 (529/538)
2 exons
identity = 0.953
5'(0.952;0.955)3'
coverage = 0.983
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 9.33333, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168344)
HIX0168344
HIT000714344_01 (
ENST00000602611
)
(Hypothetical protein.)
genome : 57,894,982 - 57,896,753 (1,772)
query : 1 - 529 (529/538)
2 exons
identity = 0.957
5'(0.957;0.955)3'
coverage = 0.983
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 9.33333, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168344)
HIX0168344
HIT000677548_01 (
ENST00000564425
)
(Hypothetical protein.)
genome : 57,894,987 - 57,895,439 (453)
query : 1 - 453 (453/453)
1 exon
identity = 0.956
5'(0.956)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10.5, cyto_nucl 10.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168344)
HIX0208143
pHIT000105740 ( pHIT000105740 )
Representative transcript
(Conserved hypothetical protein.)
genome : 57,233,166 - 57,290,001 (56,836)
query : 1 - 1,590 (1,590/1,590)
8 exons
InterPro :
IPR006104 : Glycosyl hydrolases family 2, sugar binding domain
IPR008979 : Galactose-binding domain-like
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208143)
CAGE tag :
T07R036A3C11
HIX0208143
pHIT000105740 ( pHIT000105740 )
Representative transcript
(Conserved hypothetical protein.)
genome : 57,233,166 - 57,290,001 (56,836)
query : 1 - 1,590 (1,590/1,590)
8 exons
InterPro :
IPR006104 : Glycosyl hydrolases family 2, sugar binding domain
IPR008979 : Galactose-binding domain-like
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208143)
CAGE tag :
T07R036A3C11
AC160848.1
57000001-57001476 P -
NCBI
AC122133.4
57001477-57190579 F +
NCBI
AC125231.2
57190580-57194967 F +
NCBI
AC099654.5
57194968-57342226 F +
NCBI
AC073057.6
57342227-57518331 F +
NCBI
AC092175.5
57518332-57586048 F +
NCBI
AC064862.6
57586049-57759943 F -
NCBI
AC103878.4
57759944-57761937 F +
NCBI
AC023141.6
57761938-57898342 F +
NCBI
AC138789.1
57898343-58054331 F +
NCBI
3000000
58054332-58600000 N