bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0208370
HIT000605105 (
ENST00000504942
)
(Rab-binding domain containing protein.)
genome : 104,512,976 - 105,026,843 (513,868)
query : 1 - 3,473 (3,473/3,473)
19 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208370)
HIX0218208
HIT000250865
(
AY163163
)
Representative transcript
(Conserved hypothetical protein.)
genome : 105,080,740 - 105,161,076 (80,337)
query : 1 - 516 (516/516)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 15, cyto_nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218208)
HIX0218102
HIT000622643 (
ENST00000523362
)
(C2 domain containing protein.)
genome : 105,235,592 - 105,263,964 (28,373)
query : 1 - 1,062 (1,062/1,062)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 8, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218102)
HIX0218102
HIT000132380 (
ENST00000339750
)
(C2 domain containing protein.)
genome : 105,235,880 - 105,264,087 (28,208)
query : 1 - 897 (897/897)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 8.5, cyto_nucl 6, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218102)
HIX0007715
HIT000620916 (
ENST00000521601
)
(Conserved hypothetical protein.)
genome : 105,342,552 - 105,431,140 (88,589)
query : 1 - 589 (589/589)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, mito 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007715)
HIX0007714
HIT000618912 (
ENST00000519562
)
(Dendritic cell-specific transmembrane protein; DC-STAMP; hDC-STAMP; Dendrocyte-expressed seven transmembrane protein; IL-four-induced protein; FIND; Transmembrane 7 superfamily member 4;)
genome : 105,351,315 - 105,360,902 (9,588)
query : 1 - 570 (570/570)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007714)
HIX0007714
HIT000616764 (
ENST00000517364
)
(Conserved hypothetical protein.)
genome : 105,351,762 - 105,361,013 (9,252)
query : 1 - 574 (574/574)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007714)
HIX0007714
HIT000209942 (
NM_030788
)
(Dendritic cell-specific transmembrane protein; DC-STAMP; hDC-STAMP; Dendrocyte-expressed seven transmembrane protein; IL-four-induced protein; FIND; Transmembrane 7 superfamily member 4;)
genome : 105,352,024 - 105,368,917 (16,894)
query : 1 - 1,983 (1,983/2,009)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007714)
HIX0007714
HIT000724010 (
NM_001257317
)
(Dendritic cell-specific transmembrane protein isoform 2.)
genome : 105,352,024 - 105,368,917 (16,894)
query : 1 - 1,472 (1,472/1,498)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007714)
HIX0007714
HIT000075993
(
AF277290
)
Representative transcript
(Dendritic cell-specific transmembrane protein; DC-STAMP; hDC-STAMP; Dendrocyte-expressed seven transmembrane protein; IL-four-induced protein; FIND; Transmembrane 7 superfamily member 4;)
genome : 105,352,054 - 105,368,917 (16,864)
query : 9 - 1,961 (1,953/1,987)
4 exons
identity = 0.999
5'(1.000;1.000;0.997;1.000)3'
coverage = 0.996
InterPro :
IPR012858 : Dendritic cell-specific transmembrane protein-like
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007714)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY517484
Canis
sp. (Dog) : ENSCAFT00000001043
Equus
sp. (Horse) : ENSECAT00000020323
Oryzias
sp. (Medaka) : ENSORLT00000003014
Pongo
sp. (Orangutan) : ENSPPYT00000021945
Rattus
sp. (Rat) : ENSRNOT00000044411
Macaca
sp. (Macaque) : XM_001085965
Monodelphis
sp. (Opossum) : XM_001380370
Gallus
sp. (Chicken) : XM_418376
Pan
sp. (Chimpanzee) : XM_528207
Bos
sp. (Cow) : XM_589580
HIX0007714
HIT000076739
(
AF305068
)
(Dendritic cell-specific transmembrane protein; DC-STAMP; hDC-STAMP; Dendrocyte-expressed seven transmembrane protein; IL-four-induced protein; FIND; Transmembrane 7 superfamily member 4;)
genome : 105,352,054 - 105,368,916 (16,863)
query : 3 - 1,954 (1,952/1,974)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.989
InterPro :
IPR012858 : Dendritic cell-specific transmembrane protein-like
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007714)
HIX0007714
HIT000114851 (
ENST00000297581
)
(Dendritic cell-specific transmembrane protein; DC-STAMP; hDC-STAMP; Dendrocyte-expressed seven transmembrane protein; IL-four-induced protein; FIND; Transmembrane 7 superfamily member 4;)
genome : 105,352,054 - 105,368,917 (16,864)
query : 1 - 1,953 (1,953/1,953)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007714)
HIX0007714
HIT000020272
(
AK095417
)
(Dendritic cell-specific transmembrane protein; DC-STAMP; hDC-STAMP; Dendrocyte-expressed seven transmembrane protein; IL-four-induced protein; FIND; Transmembrane 7 superfamily member 4;)
genome : 105,352,054 - 105,368,916 (16,863)
query : 1 - 1,952 (1,952/1,952)
4 exons
identity = 0.999
5'(1.000;0.999;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR012858 : Dendritic cell-specific transmembrane protein-like
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007714)
HIX0007714
HIT000263501
(
BC069349
)
(Dendritic cell-specific transmembrane protein; DC-STAMP; hDC-STAMP; Dendrocyte-expressed seven transmembrane protein; IL-four-induced protein; FIND; Transmembrane 7 superfamily member 4;)
genome : 105,352,054 - 105,368,585 (16,532)
query : 1 - 1,621 (1,621/1,621)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR012858 : Dendritic cell-specific transmembrane protein-like
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007714)
HIX0007714
HIT000617410 (
ENST00000518023
)
(Conserved hypothetical protein.)
genome : 105,352,054 - 105,361,159 (9,106)
query : 1 - 582 (582/582)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007714)
HIX0007714
HIT000340147
(
BC112018
)
(Dendritic cell-specific transmembrane protein; DC-STAMP; hDC-STAMP; Dendrocyte-expressed seven transmembrane protein; IL-four-induced protein; FIND; Transmembrane 7 superfamily member 4;)
genome : 105,360,769 - 105,368,461 (7,693)
query : 12 - 1,471 (1,460/1,471)
3 exons
identity = 0.999
5'(1.000;1.000;0.991)3'
coverage = 0.993
InterPro :
IPR012858 : Dendritic cell-specific transmembrane protein-like
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007714)
HIX0007714
HIT000503463
(
BC171732
)
(Dendritic cell-specific transmembrane protein; DC-STAMP; hDC-STAMP; Dendrocyte-expressed seven transmembrane protein; IL-four-induced protein; FIND; Transmembrane 7 superfamily member 4;)
genome : 105,360,769 - 105,368,461 (7,693)
query : 12 - 960 (949/960)
2 exons
identity = 0.998
5'(0.999;0.991)3'
coverage = 0.989
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007714)
HIX0007714
HIT000340149
(
BC112020
)
(Dendritic cell-specific transmembrane protein; DC-STAMP; hDC-STAMP; Dendrocyte-expressed seven transmembrane protein; IL-four-induced protein; FIND; Transmembrane 7 superfamily member 4;)
genome : 105,360,769 - 105,368,454 (7,686)
query : 12 - 1,464 (1,453/1,464)
3 exons
identity = 0.999
5'(1.000;1.000;0.990)3'
coverage = 0.992
InterPro :
IPR012858 : Dendritic cell-specific transmembrane protein-like
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007714)
HIX0007714
HIT000617378 (
ENST00000517991
)
(Dendritic cell-specific transmembrane protein isoform 2.)
genome : 105,360,769 - 105,368,461 (7,693)
query : 1 - 949 (949/949)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007714)
HIX0007714
HIT000617437 (
ENST00000518051
)
(Dendritic cell-specific transmembrane protein; DC-STAMP; hDC-STAMP; Dendrocyte-expressed seven transmembrane protein; IL-four-induced protein; FIND; Transmembrane 7 superfamily member 4;)
genome : 105,361,665 - 105,368,786 (7,122)
query : 1 - 580 (580/580)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, E.R. 4, pero 2, E.R._mito 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007714)
HIX0007714
HIT000619426 (
ENST00000520080
)
(Dendritic cell-specific transmembrane protein; DC-STAMP; hDC-STAMP; Dendrocyte-expressed seven transmembrane protein; IL-four-induced protein; FIND; Transmembrane 7 superfamily member 4;)
genome : 105,367,284 - 105,368,917 (1,634)
query : 1 - 696 (696/696)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007714)
HIX0007715
HIT000068234
(
AF090901
)
(Conserved hypothetical protein.)
genome : 105,391,652 - 105,394,736 (3,085)
query : 4 - 3,100 (3,097/3,232)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, extr_plas 15, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007715)
HIX0007715
HIT000198368 (
NM_001385
)
(Dihydropyrimidinase; DHP; DHPase; EC=3.5.2.2; Dihydropyrimidine amidohydrolase; Hydantoinase;)
genome : 105,391,652 - 105,479,277 (87,626)
query : 1 - 2,123 (2,123/2,197)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.2.2
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00410 : beta-Alanine metabolism (34)
00770 : Pantothenate and CoA biosynthesis (30)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14.5, nucl 6.5, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007715)
HIX0007715
HIT000042121
(
BC034395
)
(Dihydropyrimidinase; DHP; DHPase; EC=3.5.2.2; Dihydropyrimidine amidohydrolase; Hydantoinase;)
genome : 105,391,652 - 105,479,241 (87,590)
query : 1 - 2,087 (2,087/2,161)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997)5'
coverage = 1.000
EC number :
EC 3.5.2.2
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00410 : beta-Alanine metabolism (34)
00770 : Pantothenate and CoA biosynthesis (30)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
InterPro :
IPR006680 : Amidohydrolase 1
IPR011059 : Metal-dependent hydrolase, composite domain
IPR011778 : Hydantoinase/dihydropyrimidinase
GO :
0005737 : Cellular Component : cytoplasm
0006208 : Biological Process : pyrimidine nucleobase catabolic process
0016787 : Molecular Function : hydrolase activity
0016810 : Molecular Function : hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
0016812 : Molecular Function : hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14.5, nucl 6.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007715)
HIX0007715
HIT000308103 (
ENST00000351513
)
(Dihydropyrimidinase; DHP; DHPase; EC=3.5.2.2; Dihydropyrimidine amidohydrolase; Hydantoinase;)
genome : 105,391,652 - 105,479,281 (87,630)
query : 1 - 2,127 (2,127/2,127)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.2.2
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00410 : beta-Alanine metabolism (34)
00770 : Pantothenate and CoA biosynthesis (30)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14.5, nucl 6.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007715)
HIX0007715
HIT000101731
(
D78011
)
Representative transcript
(Dihydropyrimidinase; DHP; DHPase; EC=3.5.2.2; Dihydropyrimidine amidohydrolase; Hydantoinase;)
genome : 105,391,653 - 105,479,277 (87,625)
query : 1 - 2,123 (2,123/2,123)
10 exons
identity = 1.000
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.2.2
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00410 : beta-Alanine metabolism (34)
00770 : Pantothenate and CoA biosynthesis (30)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
InterPro :
IPR006680 : Amidohydrolase 1
IPR011059 : Metal-dependent hydrolase, composite domain
IPR011778 : Hydantoinase/dihydropyrimidinase
GO :
0005737 : Cellular Component : cytoplasm
0006208 : Biological Process : pyrimidine nucleobase catabolic process
0016787 : Molecular Function : hydrolase activity
0016810 : Molecular Function : hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
0016812 : Molecular Function : hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14.5, nucl 6.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007715)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK004899
Danio
sp. (Zebrafish) : AY987372
Gallus
sp. (Chicken) : BX936207
Rattus
sp. (Rat) : D63704
Oryzias
sp. (Medaka) : ENSORLT00000003064
Pongo
sp. (Orangutan) : ENSPPYT00000021946
Takifugu
sp. (Fugu) : SINFRUT00000130744
Macaca
sp. (Macaque) : XM_001086073
Monodelphis
sp. (Opossum) : XM_001380375
Canis
sp. (Dog) : XM_532301
Bos
sp. (Cow) : XM_586165
Pan
sp. (Chimpanzee) : XR_024534
Equus
sp. (Horse) : XR_044529
HIX0007715
HIT000620132 (
ENST00000520806
)
(Conserved hypothetical protein.)
genome : 105,391,663 - 105,393,639 (1,977)
query : 1 - 637 (637/637)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5, mito 5, cyto_mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007715)
HIX0007715
HIT000632947 (
ENST00000533874
)
(Dihydropyrimidinase; DHP; DHPase; EC=3.5.2.2; Dihydropyrimidine amidohydrolase; Hydantoinase;)
genome : 105,391,719 - 105,405,084 (13,366)
query : 1 - 426 (426/426)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.2.2
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00410 : beta-Alanine metabolism (34)
00770 : Pantothenate and CoA biosynthesis (30)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11, cyto 8.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007715)
HIX0007715
HIT000430127
(
AK311261
)
(Dihydropyrimidinase; DHP; DHPase; EC=3.5.2.2; Dihydropyrimidine amidohydrolase; Hydantoinase;)
genome : 105,392,741 - 105,431,082 (38,342)
query : 1 - 1,149 (1,149/1,149)
3 exons
identity = 0.999
3'(1.000;0.995;1.000)5'
coverage = 1.000
EC number :
EC 3.5.2.2
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00410 : beta-Alanine metabolism (34)
00770 : Pantothenate and CoA biosynthesis (30)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
InterPro :
IPR011059 : Metal-dependent hydrolase, composite domain
GO :
0016810 : Molecular Function : hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 11.5, extr 7, nucl 6, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007715)
HIX0007715
HIT000619820 (
ENST00000520483
)
(Dihydropyrimidinase; DHP; DHPase; EC=3.5.2.2; Dihydropyrimidine amidohydrolase; Hydantoinase;)
genome : 105,392,741 - 105,431,082 (38,342)
query : 1 - 1,149 (1,149/1,149)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.2.2
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00410 : beta-Alanine metabolism (34)
00770 : Pantothenate and CoA biosynthesis (30)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, nucl 6.5, extr 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007715)
HIX0007715
HIT000620689 (
ENST00000521372
)
(Dihydropyrimidinase; DHP; DHPase; EC=3.5.2.2; Dihydropyrimidine amidohydrolase; Hydantoinase;)
genome : 105,393,405 - 105,424,043 (30,639)
query : 1 - 413 (413/413)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.2.2
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00410 : beta-Alanine metabolism (34)
00770 : Pantothenate and CoA biosynthesis (30)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, extr 11, mito_nucl 7, cyto 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007715)
HIX0034482
HIT000251009
(
AY203950
)
Representative transcript
(Conserved hypothetical protein.)
genome : 105,394,784 - 105,395,690 (907)
query : 2 - 908 (907/926)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034482)
HIX0022838
HIT000012472
(
AK055858
)
Representative transcript
(Conserved hypothetical protein.)
genome : 105,395,847 - 105,400,016 (4,170)
query : 1 - 3,090 (3,090/3,090)
2 exons
identity = 0.995
3'(0.995;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6.5, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022838)
HIX0034418
HIT000070294
(
AF119907
)
Representative transcript
(Conserved hypothetical protein.)
genome : 105,431,740 - 105,433,728 (1,989)
query : 1 - 1,992 (1,992/1,992)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27.5, extr_plas 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034418)
HIX0034418
HIT000121913 (
ENST00000319051
)
(Hypothetical protein.)
genome : 105,432,721 - 105,433,132 (412)
query : 1 - 411 (411/411)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27.5, extr_plas 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034418)
HIX0007715
HIT000618577 (
ENST00000519217
)
(Dihydropyrimidinase; DHP; DHPase; EC=3.5.2.2; Dihydropyrimidine amidohydrolase; Hydantoinase;)
genome : 105,441,375 - 105,456,596 (15,222)
query : 1 - 676 (676/676)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.2.2
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00410 : beta-Alanine metabolism (34)
00770 : Pantothenate and CoA biosynthesis (30)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, mito 8, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007715)
HIX0007715
HIT000620888 (
ENST00000521573
)
(Dihydropyrimidinase; DHP; DHPase; EC=3.5.2.2; Dihydropyrimidine amidohydrolase; Hydantoinase;)
genome : 105,459,545 - 105,479,272 (19,728)
query : 1 - 574 (574/576)
2 exons
identity = 0.997
3'(0.989;1.000)5'
coverage = 0.997
EC number :
EC 3.5.2.2
KEGG pathway :
00240 : Pyrimidine metabolism (63)
00410 : beta-Alanine metabolism (34)
00770 : Pantothenate and CoA biosynthesis (30)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, nucl 10, mito 10, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007715)
HIX0007716
HIT000015648
(
AK090781
)
Representative transcript
(Conserved hypothetical protein.)
genome : 105,490,767 - 105,493,030 (2,264)
query : 1 - 2,263 (2,263/2,263)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14.5, mito 13, extr_plas 9.5, extr 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007716)
HIX0218201
HIT000037982
(
BC017381
)
Representative transcript
(Hypothetical protein.)
genome : 105,501,466 - 105,502,499 (1,034)
query : 3 - 1,036 (1,034/1,062)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 27, pero 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218201)
HIX0218165
HIT000622291 (
ENST00000523007
)
(Low-density lipoprotein (LDL) receptor class A, conserved site containing protein.)
genome : 105,503,646 - 105,509,833 (6,188)
query : 1 - 889 (889/889)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, plas 5.5, extr_plas 4.5, mito 4, nucl 3,
pero 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218165)
HIX0218165
HIT000621353 (
ENST00000522046
)
(Conserved hypothetical protein.)
genome : 105,503,649 - 105,507,978 (4,330)
query : 1 - 793 (793/793)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218165)
HIX0218079
HIT000065452
(
AF064841
)
Representative transcript
(Low-density lipoprotein receptor-related protein 12; LRP-12; Suppressor of tumorigenicity 7 protein; Precursor;)
genome : 105,509,982 - 105,601,227 (91,246)
query : 18 - 863 (846/863)
4 exons
identity = 0.994
3'(1.000;0.985;1.000;0.989)5'
coverage = 0.980
InterPro :
IPR000859 : CUB domain
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218079)
HIX0218079
HIT000620097 (
ENST00000520770
)
(CUB domain containing protein.)
genome : 105,509,982 - 105,601,237 (91,256)
query : 1 - 853 (853/853)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218079)
HIX0218079
HIT000306465
(
CR749434
)
(Low-density lipoprotein receptor-related protein 12; LRP-12; Suppressor of tumorigenicity 7 protein; Precursor;)
genome : 105,516,486 - 105,601,223 (84,738)
query : 2 - 4,994 (4,993/5,011)
2 exons
identity = 0.999
3'(0.999;0.994)5'
coverage = 1.000
InterPro :
IPR000859 : CUB domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218079)
HIX0218079
HIT000619025 (
ENST00000519675
)
(CUB domain containing protein.)
genome : 105,516,472 - 105,601,223 (84,752)
query : 1 - 5,008 (5,008/5,008)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218079)
HIX0208667
HIT000619073 (
ENST00000519723
)
(ETC complex I subunit family protein.)
genome : 105,578,314 - 105,578,657 (344)
query : 1 - 344 (344/344)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208667)
HIX0218261
HIT000621232 (
ENST00000521923
)
(Conserved hypothetical protein.)
genome : 105,727,070 - 105,907,945 (180,876)
query : 34 - 720 (687/720)
4 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000)3'
coverage = 0.954
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 7.5, cyto_nucl 6.66667, cyto_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218261)
HIX0208376
HIT000587161 (
ENST00000483263
)
(Ribosomal protein L14 domain containing protein.)
genome : 105,993,392 - 105,993,807 (416)
query : 1 - 416 (416/416)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11.5, extr 8, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208376)
HIX0208617
HIT000618378 (
ENST00000519012
)
(Conserved hypothetical protein.)
genome : 106,002,536 - 106,002,920 (385)
query : 1 - 385 (385/385)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11, cyto 9, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208617)
HIX0208331
HIT000570461 (
ENST00000465776
)
(Conserved hypothetical protein.)
genome : 106,023,335 - 106,023,796 (462)
query : 1 - 462 (462/462)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, extr 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208331)
HIX0208612
HIT000618296 (
ENST00000518927
)
(Hypothetical protein.)
genome : 106,155,088 - 106,200,834 (45,747)
query : 1 - 1,031 (1,031/1,031)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, extr 8, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208612)
HIX0208606
HIT000618267 (
ENST00000518897
)
(Conserved hypothetical protein.)
genome : 106,207,218 - 106,209,197 (1,980)
query : 1 - 1,980 (1,980/1,980)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 9.5, mito 7, cyto 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208606)
HIX0208382
HIT000589452 (
ENST00000485656
)
(Ribosomal protein L22/L17 family protein.)
genome : 106,300,058 - 106,300,593 (536)
query : 1 - 536 (536/536)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.3333, cyto 14.5, nucl 10,
cyto_plas 8.66667, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208382)
HIX0218263
HIT000621462 (
ENST00000522160
)
(Conserved hypothetical protein.)
genome : 106,431,372 - 106,463,992 (32,621)
query : 1 - 468 (468/468)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8, cyto_nucl 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218263)
HIX0218090
HIT000500039
(
AK316426
)
Representative transcript
(Zinc finger protein ZFPM2; Friend of GATA protein 2; FOG-2; Friend of GATA 2; hFOG-2; Zinc finger protein 89B; Zinc finger protein multitype 2;)
genome : 106,541,112 - 106,815,825 (274,714)
query : 1 - 3,300 (3,300/3,300)
6 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218090)
HIX0218090
HIT000616761 (
ENST00000517361
)
(Conserved hypothetical protein.)
genome : 106,541,112 - 106,815,825 (274,714)
query : 1 - 3,300 (3,300/3,300)
6 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218090)
HIX0020449
HIT000485479 (
NM_001100117
)
(Regulating synaptic membrane exocytosis protein 2 isoform a.)
genome : 104,512,976 - 105,266,656 (753,681)
query : 1 - 6,797 (6,797/6,797)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020449)
HIX0020449
HIT000046812
(
AK126939
)
(Regulating synaptic membrane exocytosis protein 2 isoform b.)
genome : 104,512,976 - 105,264,087 (751,112)
query : 1 - 4,228 (4,228/4,228)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR001478 : PDZ domain
IPR010911 : Rab-binding domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR017455 : Zinc finger, FYVE-related
GO :
0005515 : Molecular Function : protein binding
0006886 : Biological Process : intracellular protein transport
0017137 : Molecular Function : Rab GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020449)
HIX0020449
HIT000505472 (
ENST00000406091
)
(Regulating synaptic membrane exocytosis protein 2 isoform a.)
genome : 104,513,115 - 105,264,048 (750,934)
query : 1 - 4,050 (4,050/4,050)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020449)
HIX0020449
HIT000204993 (
NM_014677
)
(Regulating synaptic membrane exocytosis protein 2 isoform b.)
genome : 104,831,416 - 105,266,656 (435,241)
query : 1 - 6,420 (6,420/6,420)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020449)
HIX0020449
HIT000000476
(
AB018294
)
(Regulating synaptic membrane exocytosis protein 2; Rab-3-interacting molecule 2; RIM 2; Rab-3-interacting protein 3;)
genome : 104,831,488 - 105,264,087 (432,600)
query : 1 - 3,854 (3,854/3,854)
21 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 17.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020449)
HIX0020449
HIT000108316 (
ENST00000262231
)
(Regulating synaptic membrane exocytosis protein 2; Rab-3-interacting molecule 2; RIM 2; Rab-3-interacting protein 3;)
genome : 104,831,488 - 105,264,087 (432,600)
query : 1 - 3,854 (3,854/3,854)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 17.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020449)
HIX0020449
HIT000607718 (
ENST00000507740
)
(Regulating synaptic membrane exocytosis protein 2 isoform b.)
genome : 104,831,500 - 105,268,322 (436,823)
query : 1 - 8,002 (8,002/8,002)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020449)
HIX0020449
HIT000052774
(
BC043144
)
(Regulating synaptic membrane exocytosis protein 2 isoform a.)
genome : 104,831,500 - 105,264,756 (433,257)
query : 1 - 4,436 (4,436/4,451)
22 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020449)
HIX0020449
HIT000427697
(
AK308831
)
(Regulating synaptic membrane exocytosis protein 2 isoform b.)
genome : 104,831,615 - 105,263,298 (431,684)
query : 1 - 3,879 (3,879/3,879)
26 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020449)
HIX0020449
HIT000506936 (
ENST00000408894
)
(Regulating synaptic membrane exocytosis protein 2 isoform b.)
genome : 104,831,615 - 105,263,298 (431,684)
query : 1 - 3,880 (3,880/3,880)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020449)
HIX0020449
HIT000306411
(
CR749374
)
Representative transcript
(Regulating synaptic membrane exocytosis protein 2 isoform a.)
genome : 104,892,645 - 105,264,087 (371,443)
query : 2 - 4,385 (4,384/4,405)
28 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.992)3'
coverage = 0.999
InterPro :
IPR000008 : C2 domain
IPR001478 : PDZ domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.3333, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020449)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB021131
Rattus
sp. (Rat) : AF199322
Danio
sp. (Zebrafish) : BC059440
Bos
sp. (Cow) : BC151717
Gallus
sp. (Chicken) : CR388769
Equus
sp. (Horse) : ENSECAT00000024920
Oryzias
sp. (Medaka) : ENSORLT00000003006
Pongo
sp. (Orangutan) : ENSPPYT00000021944
Takifugu
sp. (Fugu) : SINFRUT00000130752
Pan
sp. (Chimpanzee) : XM_001157433
Monodelphis
sp. (Opossum) : XM_001369413
Canis
sp. (Dog) : XM_844556
HIX0020449
HIT000534327 (
ENST00000436393
)
(Regulating synaptic membrane exocytosis protein 2 isoform a.)
genome : 104,892,645 - 105,264,087 (371,443)
query : 1 - 4,384 (4,384/4,384)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.3333, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020449)
HIX0007717
HIT000204394 (
NM_013437
)
(Low-density lipoprotein receptor-related protein 12; LRP-12; Suppressor of tumorigenicity 7 protein; Precursor;)
genome : 105,501,459 - 105,601,252 (99,794)
query : 1 - 4,149 (4,149/4,149)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21.5, extr_plas 14.5, extr 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007717)
HIX0007717
HIT000522777 (
ENST00000424843
)
(Low-density lipoprotein receptor-related protein 12; LRP-12; Suppressor of tumorigenicity 7 protein; Precursor;)
genome : 105,501,459 - 105,601,252 (99,794)
query : 1 - 4,092 (4,092/4,092)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, extr_plas 14, plas 6, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007717)
HIX0007717
HIT000560167 (
NM_001135703
)
(Low-density lipoprotein receptor-related protein 12; LRP-12; Suppressor of tumorigenicity 7 protein; Precursor;)
genome : 105,501,459 - 105,601,252 (99,794)
query : 1 - 4,092 (4,092/4,092)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, extr_plas 14, plas 6, lyso 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007717)
HIX0007717
HIT000111469 (
ENST00000276654
)
(Low-density lipoprotein receptor-related protein 12; LRP-12; Suppressor of tumorigenicity 7 protein; Precursor;)
genome : 105,501,478 - 105,601,234 (99,757)
query : 1 - 4,112 (4,112/4,112)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21.5, extr_plas 14.5, extr 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007717)
HIX0007717
HIT000328892
(
AB208957
)
(Low-density lipoprotein receptor-related protein 12; LRP-12; Suppressor of tumorigenicity 7 protein; Precursor;)
genome : 105,501,478 - 105,521,239 (19,762)
query : 2 - 3,805 (3,804/3,805)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.973)5'
coverage = 1.000
InterPro :
IPR000859 : CUB domain
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.5, cyto_plas 11.5, plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007717)
HIX0007717
HIT000046221
(
AK126348
)
(Low-density lipoprotein receptor-related protein 12; LRP-12; Suppressor of tumorigenicity 7 protein; Precursor;)
genome : 105,501,484 - 105,508,370 (6,887)
query : 1 - 3,350 (3,350/3,350)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, cyto_mito 11.5, cyto_nucl 6, nucl 5.5,
cyto 5, cyto_pero 4.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007717)
HIX0007717
HIT000617757 (
ENST00000518375
)
(Low-density lipoprotein receptor-related protein 12; LRP-12; Suppressor of tumorigenicity 7 protein; Precursor;)
genome : 105,501,484 - 105,508,370 (6,887)
query : 1 - 3,350 (3,350/3,350)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, cyto_mito 11.5, cyto_nucl 6, nucl 5.5,
cyto 5, cyto_pero 4.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007717)
HIX0007717
HIT000006265
(
AK022991
)
(Conserved hypothetical protein.)
genome : 105,501,487 - 105,502,820 (1,334)
query : 1 - 1,335 (1,335/1,335)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 24, E.R._mito 4.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007717)
HIX0007717
HIT000041422
(
BC032109
)
(Low-density lipoprotein receptor-related protein 12; LRP-12; Suppressor of tumorigenicity 7 protein; Precursor;)
genome : 105,502,461 - 105,601,128 (98,668)
query : 1 - 3,023 (3,023/3,046)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000859 : CUB domain
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21.5, extr_plas 14.5, extr 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007717)
HIX0007717
HIT000072287
(
AF166350
)
Representative transcript
(Low-density lipoprotein receptor-related protein 12; LRP-12; Suppressor of tumorigenicity 7 protein; Precursor;)
genome : 105,502,462 - 105,601,168 (98,707)
query : 1 - 3,065 (3,065/3,078)
7 exons
identity = 0.998
3'(0.996;1.000;0.999;1.000;1.000;1.000;0.992)5'
coverage = 0.999
InterPro :
IPR000859 : CUB domain
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21.5, extr_plas 14.5, extr 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007717)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK050512
Bos
sp. (Cow) : BC126535
Danio
sp. (Zebrafish) : BC161621
Gallus
sp. (Chicken) : CR406808
Pongo
sp. (Orangutan) : CR860634
Monodelphis
sp. (Opossum) : ENSMODT00000006816
Oryzias
sp. (Medaka) : ENSORLT00000002046
Tetraodon
sp. (Tetraodon) : GSTENT00008027001
Takifugu
sp. (Fugu) : SINFRUT00000138975
Equus
sp. (Horse) : XM_001494687
Rattus
sp. (Rat) : XM_235261
Pan
sp. (Chimpanzee) : XM_519901
Canis
sp. (Dog) : XM_539117
HIX0007717
HIT000493998
(
AK299374
)
(Low-density lipoprotein receptor-related protein 12; LRP-12; Suppressor of tumorigenicity 7 protein; Precursor;)
genome : 105,502,462 - 105,601,252 (98,791)
query : 1 - 3,086 (3,086/3,086)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.985)5'
coverage = 1.000
InterPro :
IPR000859 : CUB domain
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, extr_plas 14, plas 6, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007717)
HIX0007717
HIT000422549
(
AK289752
)
(Low-density lipoprotein receptor-related protein 12; LRP-12; Suppressor of tumorigenicity 7 protein; Precursor;)
genome : 105,502,650 - 105,601,156 (98,507)
query : 1 - 2,862 (2,862/2,862)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000859 : CUB domain
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR023415 : Low-density lipoprotein (LDL) receptor class A, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21.5, extr_plas 14.5, extr 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007717)
HIX0034259
HIT000617566 (
ENST00000518180
)
(Zinc finger protein ZFPM2; Friend of GATA protein 2; FOG-2; Friend of GATA 2; hFOG-2; Zinc finger protein 89B; Zinc finger protein multitype 2;)
genome : 105,715,947 - 106,431,488 (715,542)
query : 1 - 596 (596/596)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034259)
HIX0034259
HIT000506092 (
ENST00000407775
)
(Zinc finger protein ZFPM2; Friend of GATA protein 2; FOG-2; Friend of GATA 2; hFOG-2; Zinc finger protein 89B; Zinc finger protein multitype 2;)
genome : 106,330,920 - 106,816,760 (485,841)
query : 1 - 4,700 (4,700/4,700)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034259)
HIX0034259
HIT000070202
(
AF119334
)
Representative transcript
(Zinc finger protein ZFPM2; Friend of GATA protein 2; FOG-2; Friend of GATA 2; hFOG-2; Zinc finger protein 89B; Zinc finger protein multitype 2;)
genome : 106,331,147 - 106,816,760 (485,614)
query : 2 - 4,474 (4,473/4,507)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034259)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : AY515851
Mus
sp. (Mouse) : BC059241
Macaca
sp. (Macaque) : ENSMMUT00000038924
Oryzias
sp. (Medaka) : ENSORLT00000004036
Pongo
sp. (Orangutan) : ENSPPYT00000021950
Rattus
sp. (Rat) : ENSRNOT00000057207
Canis
sp. (Dog) : EU541502
Tetraodon
sp. (Tetraodon) : GSTENT00015632001
Takifugu
sp. (Fugu) : SINFRUT00000131969
Pan
sp. (Chimpanzee) : XM_001158075
Monodelphis
sp. (Opossum) : XM_001380396
Equus
sp. (Horse) : XM_001494469
Gallus
sp. (Chicken) : XM_418380
Bos
sp. (Cow) : XR_028163
HIX0034259
HIT000339331
(
BC109222
)
(Zinc finger protein ZFPM2; Friend of GATA protein 2; FOG-2; Friend of GATA 2; hFOG-2; Zinc finger protein 89B; Zinc finger protein multitype 2;)
genome : 106,331,147 - 106,815,816 (484,670)
query : 2 - 3,530 (3,529/3,530)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034259)
HIX0034259
HIT000339332
(
BC109223
)
(Zinc finger protein ZFPM2; Friend of GATA protein 2; FOG-2; Friend of GATA 2; hFOG-2; Zinc finger protein 89B; Zinc finger protein multitype 2;)
genome : 106,331,147 - 106,815,816 (484,670)
query : 2 - 3,530 (3,529/3,530)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034259)
HIX0034259
HIT000203892 (
NM_012082
)
(Zinc finger protein ZFPM2; Friend of GATA protein 2; FOG-2; Friend of GATA 2; hFOG-2; Zinc finger protein 89B; Zinc finger protein multitype 2;)
genome : 106,331,147 - 106,816,766 (485,620)
query : 1 - 4,479 (4,479/4,507)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034259)
HIX0034259
HIT000491621
(
AK296997
)
(Zinc finger protein ZFPM2; Friend of GATA protein 2; FOG-2; Friend of GATA 2; hFOG-2; Zinc finger protein 89B; Zinc finger protein multitype 2;)
genome : 106,331,771 - 106,816,098 (484,328)
query : 1 - 3,955 (3,955/3,955)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034259)
HIX0034259
HIT000619828 (
ENST00000520492
)
(Zinc finger protein ZFPM2; Friend of GATA protein 2; FOG-2; Friend of GATA 2; hFOG-2; Zinc finger protein 89B; Zinc finger protein multitype 2;)
genome : 106,331,771 - 106,816,098 (484,328)
query : 1 - 3,960 (3,960/3,960)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034259)
HIX0034259
HIT000619373 (
ENST00000520027
)
(Zinc finger protein ZFPM2; Friend of GATA protein 2; FOG-2; Friend of GATA 2; hFOG-2; Zinc finger protein 89B; Zinc finger protein multitype 2;)
genome : 106,370,706 - 106,646,527 (275,822)
query : 1 - 594 (594/594)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034259)
HIX0034259
HIT000623499 (
ENST00000524235
)
(Zinc finger protein ZFPM2; Friend of GATA protein 2; FOG-2; Friend of GATA 2; hFOG-2; Zinc finger protein 89B; Zinc finger protein multitype 2;)
genome : 106,370,745 - 106,573,650 (202,906)
query : 1 - 574 (574/574)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 6.5, cyto 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034259)
HIX0034259
HIT000250606
(
AL389989
)
(Zinc finger protein ZFPM2; Friend of GATA protein 2; FOG-2; Friend of GATA 2; hFOG-2; Zinc finger protein 89B; Zinc finger protein multitype 2;)
genome : 106,399,374 - 106,801,255 (401,882)
query : 1 - 1,582 (1,582/1,602)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 6, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034259)
HIX0034259
HIT000611064 (
ENST00000511341
)
(Zinc finger protein ZFPM2; Friend of GATA protein 2; FOG-2; Friend of GATA 2; hFOG-2; Zinc finger protein 89B; Zinc finger protein multitype 2;)
genome : 106,399,374 - 106,801,255 (401,882)
query : 1 - 1,582 (1,582/1,582)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, extr 8, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034259)
AC107933.6
105000001-105202219 F -
NCBI
AP002849.2
105202220-105321293 O +
NCBI
AP003471.2
105321294-105448291 O +
NCBI
AP002847.2
105448292-105505633 O +
NCBI
AC087370.26
105505634-105559065 F +
NCBI
AC090827.11
105559066-105685361 F +
NCBI
AC012564.21
105685362-105820242 F +
NCBI
AC021498.12
105820243-105969848 F +
NCBI
AC090142.3
105969849-106131386 F -
NCBI
AC021546.7
106131387-106252145 F -
NCBI
AC041039.8
106252146-106400836 F -
NCBI
AC022721.9
106400837-106525488 F +
NCBI
AC018525.8
106525489-106600000 F +
NCBI