bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0208826
HIT000621198 (
ENST00000521887
)
(Conserved hypothetical protein.)
genome : 33,084,366 - 33,084,665 (300)
query : 1 - 300 (300/300)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11, cyto 10, cyto_plas 7.83333,
nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208826)
HIX0007444
HIT000260922
(
BC063462
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,228,345 - 33,319,240 (90,896)
query : 1 - 3,586 (3,586/3,610)
5 exons
identity = 0.999
3'(1.000;0.995;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
InterPro :
IPR001503 : Glycosyl transferase, family 10
GO :
0006486 : Biological Process : protein glycosylation
0008417 : Molecular Function : fucosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 9.5, extr 9, E.R._golg 9, golg 7.5, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000125119 (
ENST00000327671
)
(Alpha-(1,3)-fucosyltransferase 10; EC=2.4.1.-; Fucosyltransferase X; Fuc-TX; FucT-X; Galactoside 3-L-fucosyltransferase 10; Fucosyltransferase 10;)
genome : 33,228,342 - 33,330,940 (102,599)
query : 1 - 3,825 (3,825/3,825)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 9.5, extr 9, E.R._golg 9, golg 7.5, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000210803 (
NM_032664
)
(Alpha-(1,3)-fucosyltransferase 10; EC=2.4.1.-; Fucosyltransferase X; Fuc-TX; FucT-X; Galactoside 3-L-fucosyltransferase 10; Fucosyltransferase 10;)
genome : 33,228,342 - 33,330,664 (102,323)
query : 1 - 3,549 (3,549/3,549)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 9.5, extr 9, E.R._golg 9, golg 7.5, lyso 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000012813
(
AK056199
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,228,350 - 33,246,534 (18,185)
query : 1 - 2,027 (2,027/2,027)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
InterPro :
IPR001503 : Glycosyl transferase, family 10
GO :
0006486 : Biological Process : protein glycosylation
0008417 : Molecular Function : fucosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 7, cyto 3, mito 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000618044 (
ENST00000518672
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,228,579 - 33,319,245 (90,667)
query : 1 - 3,115 (3,115/3,115)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000247981
(
AJ431184
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,229,028 - 33,319,245 (90,218)
query : 10 - 2,675 (2,666/2,675)
4 exons
identity = 0.999
3'(1.000;0.998;0.997;1.000)5'
coverage = 0.997
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
InterPro :
IPR001503 : Glycosyl transferase, family 10
GO :
0006486 : Biological Process : protein glycosylation
0008417 : Molecular Function : fucosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000618794 (
ENST00000519440
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,229,347 - 33,235,074 (5,728)
query : 1 - 583 (583/583)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9.5, nucl 6.5, mito 6, extr 5,
pero 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000249139
(
AJ582015
)
(Alpha-(1,3)-fucosyltransferase 10; EC=2.4.1.-; Fucosyltransferase X; Fuc-TX; FucT-X; Galactoside 3-L-fucosyltransferase 10; Fucosyltransferase 10;)
genome : 33,229,597 - 33,330,664 (101,068)
query : 1 - 2,295 (2,295/2,312)
5 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.-
InterPro :
IPR001503 : Glycosyl transferase, family 10
GO :
0006486 : Biological Process : protein glycosylation
0008417 : Molecular Function : fucosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 9.5, extr 9, E.R._golg 9, golg 7.5, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000425790
(
AK292993
)
Representative transcript
(Alpha-(1,3)-fucosyltransferase 10; EC=2.4.1.-; Fucosyltransferase X; Fuc-TX; FucT-X; Galactoside 3-L-fucosyltransferase 10; Fucosyltransferase 10;)
genome : 33,229,580 - 33,330,662 (101,083)
query : 1 - 2,309 (2,309/2,309)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.988)5'
coverage = 1.000
EC number :
EC 2.4.1.-
InterPro :
IPR001503 : Glycosyl transferase, family 10
GO :
0006486 : Biological Process : protein glycosylation
0008417 : Molecular Function : fucosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 9.5, extr 9, E.R._golg 9, golg 7.5, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ535692
Canis
sp. (Dog) : AJ879585
Danio
sp. (Zebrafish) : AJ879586
Mus
sp. (Mouse) : AK147136
Bos
sp. (Cow) : BC147891
Equus
sp. (Horse) : ENSECAT00000021590
Monodelphis
sp. (Opossum) : ENSMODT00000024108
Pongo
sp. (Orangutan) : ENSPPYT00000021571
Macaca
sp. (Macaque) : XM_001086212
HIX0007444
HIT000617333 (
ENST00000517942
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,229,597 - 33,246,768 (17,172)
query : 1 - 582 (582/582)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 20, cyto 16, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000491756
(
AK297132
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,229,598 - 33,330,631 (101,034)
query : 1 - 2,386 (2,386/2,386)
6 exons
identity = 0.998
3'(1.000;0.996;0.997;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
InterPro :
IPR001503 : Glycosyl transferase, family 10
GO :
0006486 : Biological Process : protein glycosylation
0008417 : Molecular Function : fucosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 9.5, extr 9, E.R._golg 9, golg 7.5, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000497855
(
AK303231
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,229,782 - 33,330,637 (100,856)
query : 1 - 2,041 (2,041/2,041)
5 exons
identity = 0.998
3'(0.994;1.000;1.000;1.000;0.982)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
InterPro :
IPR001503 : Glycosyl transferase, family 10
GO :
0006486 : Biological Process : protein glycosylation
0008417 : Molecular Function : fucosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 7.5, E.R._mito 7.5, cyto_nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000623288 (
ENST00000524021
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,229,782 - 33,330,637 (100,856)
query : 1 - 2,042 (2,042/2,042)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 7.5, E.R._mito 7.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000617282 (
ENST00000517891
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,229,900 - 33,235,098 (5,199)
query : 1 - 486 (486/486)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, cyto_nucl 10.5, extr 7, mito 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0168931
HIT000465236_09
(
DQ598705
)
Representative transcript
(Non-protein coding transcript.)
genome : 33,245,159 - 33,245,189 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168931)
HIX0007444
HIT000248372
(
AJ512465
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,246,414 - 33,330,652 (84,239)
query : 1 - 1,623 (1,623/1,623)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
InterPro :
IPR001503 : Glycosyl transferase, family 10
GO :
0006486 : Biological Process : protein glycosylation
0008417 : Molecular Function : fucosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, E.R. 8, golg 8, E.R._golg 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000248540
(
AJ535838
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,246,414 - 33,330,652 (84,239)
query : 1 - 1,673 (1,673/1,673)
5 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;0.859)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
InterPro :
IPR001503 : Glycosyl transferase, family 10
GO :
0006486 : Biological Process : protein glycosylation
0008417 : Molecular Function : fucosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 8, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000248541
(
AJ535839
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,246,414 - 33,330,652 (84,239)
query : 1 - 1,651 (1,651/1,651)
5 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;0.859)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
InterPro :
IPR001503 : Glycosyl transferase, family 10
GO :
0006486 : Biological Process : protein glycosylation
0008417 : Molecular Function : fucosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 20, cyto 8, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000620095 (
ENST00000520767
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,246,414 - 33,330,652 (84,239)
query : 1 - 1,623 (1,623/1,623)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, E.R. 8, golg 8, E.R._golg 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000129696 (
ENST00000335589
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,246,433 - 33,330,664 (84,232)
query : 1 - 1,654 (1,654/1,654)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 20, cyto 8, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000617462 (
ENST00000518076
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,246,481 - 33,313,339 (66,859)
query : 1 - 1,221 (1,221/1,221)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0208812
HIT000621030 (
ENST00000521717
)
(Nucleotide-binding alpha-beta plait domain containing protein.)
genome : 33,293,786 - 33,294,218 (433)
query : 1 - 433 (433/433)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 10.5, mito 10, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208812)
HIX0007444
HIT000023335
(
AK098505
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,309,246 - 33,330,631 (21,386)
query : 1 - 2,180 (2,180/2,180)
3 exons
identity = 0.993
3'(0.992;1.000;0.980)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
InterPro :
IPR001503 : Glycosyl transferase, family 10
GO :
0006486 : Biological Process : protein glycosylation
0008417 : Molecular Function : fucosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000514103 (
ENST00000416169
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,309,246 - 33,330,631 (21,386)
query : 1 - 2,187 (2,187/2,187)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000032058
(
BC004884
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,310,308 - 33,319,245 (8,938)
query : 19 - 1,095 (1,077/1,114)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.984
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
InterPro :
IPR001503 : Glycosyl transferase, family 10
GO :
0006486 : Biological Process : protein glycosylation
0008417 : Molecular Function : fucosyltransferase activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000620258 (
ENST00000520935
)
(Alpha-(1,3)-fucosyltransferase 10.)
genome : 33,310,592 - 33,313,350 (2,759)
query : 1 - 500 (500/500)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.69
KEGG pathway :
00601 : Glycosphingolipid biosynthesis - lacto and neolacto series (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 14.5, cyto 12, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007444
HIT000619839 (
ENST00000520503
)
(Hypothetical protein.)
genome : 33,310,900 - 33,330,609 (19,710)
query : 1 - 571 (571/571)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 6, mito 5, cyto_nucl 4.33333,
cyto_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007444)
HIX0007445
HIT000313556 (
ENST00000360128
)
(Protein MAK16 homolog; NNP78; Protein RBM13;)
genome : 33,342,268 - 33,358,778 (16,511)
query : 1 - 3,991 (3,991/3,991)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007445)
HIX0007445
HIT000210689 (
NM_032509
)
(Protein MAK16 homolog; NNP78; Protein RBM13;)
genome : 33,342,685 - 33,358,778 (16,094)
query : 1 - 3,574 (3,574/3,590)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007445)
HIX0007445
HIT000433357
(
AK314491
)
(Protein MAK16 homolog; NNP78; Protein RBM13;)
genome : 33,342,697 - 33,356,147 (13,451)
query : 1 - 931 (931/931)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.987;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006958 : Mak16 protein
IPR029004 : Ribosomal L28e/Mak16
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007445)
HIX0007445
HIT000384606
(
AK225476
)
(Protein MAK16 homolog.)
genome : 33,342,699 - 33,358,681 (15,983)
query : 1 - 1,447 (1,447/1,467)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.972;1.000)3'
coverage = 1.000
InterPro :
IPR006958 : Mak16 protein
IPR029004 : Ribosomal L28e/Mak16
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007445)
HIX0007445
HIT000010741
(
AK027469
)
(Protein MAK16 homolog; NNP78; Protein RBM13;)
genome : 33,342,700 - 33,357,150 (14,451)
query : 1 - 1,931 (1,931/1,931)
10 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR006958 : Mak16 protein
IPR029004 : Ribosomal L28e/Mak16
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007445)
HIX0007445
HIT000620091 (
ENST00000520763
)
(Protein MAK16 homolog.)
genome : 33,342,700 - 33,346,809 (4,110)
query : 1 - 569 (569/569)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007445)
HIX0007445
HIT000088870
(
BC015965
)
(Protein MAK16 homolog.)
genome : 33,342,704 - 33,346,618 (3,915)
query : 5 - 378 (374/406)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.989
InterPro :
IPR029004 : Ribosomal L28e/Mak16
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007445)
HIX0007445
HIT000616964 (
ENST00000517567
)
(Protein MAK16 homolog.)
genome : 33,342,700 - 33,346,530 (3,831)
query : 1 - 583 (583/583)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 7, cyto_nucl 7, mito 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007445)
HIX0007445
HIT000095901
(
BC039740
)
(Protein MAK16 homolog; NNP78; Protein RBM13;)
genome : 33,342,705 - 33,358,778 (16,074)
query : 2 - 3,554 (3,553/3,570)
10 exons
identity = 0.997
5'(0.889;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR006958 : Mak16 protein
IPR029004 : Ribosomal L28e/Mak16
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007445)
HIX0007445
HIT000075055
(
AF251062
)
(Protein MAK16 homolog; NNP78; Protein RBM13;)
genome : 33,342,711 - 33,358,687 (15,977)
query : 2 - 3,462 (3,461/3,462)
10 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR006958 : Mak16 protein
IPR029004 : Ribosomal L28e/Mak16
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007445)
HIX0007445
HIT000259004
(
BC028230
)
(Protein MAK16 homolog; NNP78; Protein RBM13;)
genome : 33,342,717 - 33,358,776 (16,060)
query : 1 - 3,540 (3,540/3,568)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR006958 : Mak16 protein
IPR029004 : Ribosomal L28e/Mak16
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007445)
HIX0007445
HIT000053476
(
BC050528
)
Representative transcript
(Protein MAK16 homolog; NNP78; Protein RBM13;)
genome : 33,342,717 - 33,358,776 (16,060)
query : 1 - 3,535 (3,535/3,549)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR006958 : Mak16 protein
IPR029004 : Ribosomal L28e/Mak16
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007445)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC013079
Rattus
sp. (Rat) : BC090035
Bos
sp. (Cow) : BC114829
Gallus
sp. (Chicken) : BX932097
Macaca
sp. (Macaque) : ENSMMUT00000014321
Pongo
sp. (Orangutan) : ENSPPYT00000021572
Takifugu
sp. (Fugu) : SINFRUT00000163244
Pan
sp. (Chimpanzee) : XM_001169206
Monodelphis
sp. (Opossum) : XM_001381762
Equus
sp. (Horse) : XM_001494394
Canis
sp. (Dog) : XM_532811
HIX0007445
HIT000617770 (
ENST00000518389
)
(Protein MAK16 homolog; NNP78; Protein RBM13;)
genome : 33,342,718 - 33,356,164 (13,447)
query : 1 - 872 (872/872)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007445)
HIX0007445
HIT000618453 (
ENST00000519089
)
(Protein MAK16 homolog.)
genome : 33,342,725 - 33,346,120 (3,396)
query : 1 - 558 (558/558)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, mito 2, cyto_pero 2, cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007445)
HIX0021171
HIT000209734 (
NM_025115
)
(TELO2-interacting protein 2;)
genome : 33,356,027 - 33,370,703 (14,677)
query : 1 - 2,763 (2,763/2,763)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021171)
HIX0021171
HIT000485624 (
NM_001102401
)
(TELO2-interacting protein 2;)
genome : 33,356,027 - 33,370,703 (14,677)
query : 1 - 2,394 (2,394/2,394)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021171)
HIX0021171
HIT000724454 (
NM_001265581
)
(TELO2-interacting protein 2;)
genome : 33,356,027 - 33,370,703 (14,677)
query : 1 - 2,516 (2,516/2,516)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021171)
HIX0021171
HIT000023799
(
AL049422
)
(TELO2-interacting protein 2.)
genome : 33,356,372 - 33,358,697 (2,326)
query : 20 - 2,343 (2,324/2,343)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021171)
HIX0021171
HIT000010190
(
AK026916
)
(TELO2-interacting protein 2;)
genome : 33,356,472 - 33,370,553 (14,082)
query : 1 - 2,170 (2,170/2,192)
7 exons
identity = 0.996
3'(0.997;0.994;1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR018870 : Protein of unknown function DUF2454
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021171)
HIX0021171
HIT000262356
(
BC066935
)
Representative transcript
(TELO2-interacting protein 2;)
genome : 33,356,474 - 33,370,656 (14,183)
query : 1 - 1,900 (1,900/1,916)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.982)5'
coverage = 0.999
InterPro :
IPR018870 : Protein of unknown function DUF2454
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021171)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK139425
Rattus
sp. (Rat) : BC082008
Bos
sp. (Cow) : BC142515
Tetraodon
sp. (Tetraodon) : CR730600
Gallus
sp. (Chicken) : CR733281
Canis
sp. (Dog) : ENSCAFT00000010214
Monodelphis
sp. (Opossum) : ENSMODT00000014119
Pongo
sp. (Orangutan) : ENSPPYT00000021573
Pan
sp. (Chimpanzee) : ENSPTRT00000045048
Takifugu
sp. (Fugu) : SINFRUT00000163798
Macaca
sp. (Macaque) : XM_001087252
Danio
sp. (Zebrafish) : XM_001336037
Equus
sp. (Horse) : XM_001493130
HIX0021171
HIT000314074 (
ENST00000360742
)
(TELO2-interacting protein 2;)
genome : 33,356,472 - 33,370,627 (14,156)
query : 1 - 2,242 (2,242/2,242)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021171)
HIX0021171
HIT000529090 (
ENST00000431156
)
(TELO2-interacting protein 2;)
genome : 33,356,474 - 33,371,119 (14,646)
query : 1 - 2,363 (2,363/2,363)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021171)
HIX0021171
HIT000057057
(
BX648410
)
(TELO2-interacting protein 2;)
genome : 33,356,598 - 33,370,617 (14,020)
query : 1 - 1,835 (1,835/1,897)
8 exons
identity = 0.990
3'(1.000;1.000;0.888;0.979;1.000;1.000;0.999;
1.000)5'
coverage = 1.000
InterPro :
IPR018870 : Protein of unknown function DUF2454
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021171)
HIX0021171
HIT000033185
(
BC007387
)
(TELO2-interacting protein 2;)
genome : 33,356,598 - 33,370,628 (14,031)
query : 1 - 1,748 (1,748/1,767)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;0.995;1.000;1.000;0.997;
1.000)5'
coverage = 1.000
InterPro :
IPR018870 : Protein of unknown function DUF2454
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021171)
HIX0021171
HIT000619970 (
ENST00000520636
)
(TELO2-interacting protein 2;)
genome : 33,356,636 - 33,370,230 (13,595)
query : 1 - 1,588 (1,588/1,588)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021171)
HIX0021171
HIT000622587 (
ENST00000523305
)
(TELO2-interacting protein 2.)
genome : 33,369,829 - 33,370,637 (809)
query : 1 - 485 (485/485)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 14.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021171)
HIX0208657
HIT000618923 (
ENST00000519573
)
(Beta-thymosin family protein.)
genome : 33,380,672 - 33,380,809 (138)
query : 1 - 138 (138/138)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10, nucl 8.5, extr 8, mito 4,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208657)
HIX0208479
HIT000616099 (
ENST00000516696
)
(Non-protein coding transcript.)
genome : 33,397,558 - 33,397,655 (98)
query : 1 - 98 (98/98)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208479)
HIX0208646
HIT000618740 (
ENST00000519384
)
(Ribosomal protein L10e/L16 domain containing protein.)
genome : 33,397,703 - 33,398,011 (309)
query : 1 - 309 (309/309)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11, extr 7, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208646)
HIX0007447
HIT000005862
(
AK022588
)
(RING finger protein 122;)
genome : 33,405,273 - 33,424,643 (19,371)
query : 1 - 1,869 (1,869/1,869)
6 exons
identity = 0.997
3'(0.998;1.000;1.000;0.978;0.987;0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto 10, E.R._mito 7, mito 5.5,
cyto_pero 5.5, cyto_plas 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007447)
HIX0007447
HIT000106909 (
ENST00000256257
)
(RING finger protein 122;)
genome : 33,405,273 - 33,424,643 (19,371)
query : 1 - 1,868 (1,868/1,868)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto 10, E.R._mito 7, mito 5.5,
cyto_pero 5.5, cyto_plas 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007447)
HIX0007447
HIT000209478 (
NM_024787
)
(RING finger protein 122;)
genome : 33,405,273 - 33,424,643 (19,371)
query : 1 - 1,868 (1,868/1,868)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto 10, E.R._mito 7, mito 5.5,
cyto_pero 5.5, cyto_plas 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007447)
HIX0007447
HIT000334859
(
BC093884
)
Representative transcript
(RING finger protein 122;)
genome : 33,406,248 - 33,424,264 (18,017)
query : 1 - 514 (514/514)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto 10, E.R._mito 7, mito 5.5,
cyto_pero 5.5, cyto_plas 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007447)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC038399
Bos
sp. (Cow) : BC151328
Danio
sp. (Zebrafish) : BC159258
Tetraodon
sp. (Tetraodon) : CR732858
Equus
sp. (Horse) : ENSECAT00000016076
Gallus
sp. (Chicken) : ENSGALT00000002505
Oryzias
sp. (Medaka) : ENSORLT00000004566
Pongo
sp. (Orangutan) : ENSPPYT00000021574
Rattus
sp. (Rat) : ENSRNOT00000031701
Tetraodon
sp. (Tetraodon) : GSTENT00022694001
Takifugu
sp. (Fugu) : SINFRUT00000134897
Takifugu
sp. (Fugu) : SINFRUT00000162718
Macaca
sp. (Macaque) : XM_001087481
Pan
sp. (Chimpanzee) : XM_001169238
Danio
sp. (Zebrafish) : XM_001344334
Monodelphis
sp. (Opossum) : XM_001381773
Canis
sp. (Dog) : XM_845404
HIX0007447
HIT000336934
(
BC101573
)
(RING finger protein 122;)
genome : 33,406,248 - 33,424,264 (18,017)
query : 1 - 514 (514/514)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto 10, E.R._mito 7, mito 5.5,
cyto_pero 5.5, cyto_plas 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007447)
HIX0007448
HIT000031442
(
BC003115
)
(Dual specificity protein phosphatase 26; EC=3.1.3.16; EC=3.1.3.48; Dual specificity phosphatase SKRP3; Low-molecular-mass dual-specificity phosphatase 4; DSP-4; LDP-4; Mitogen-activated protein kinase phosphatase 8; MAP kinase phosphatase 8; MKP-8; Novel amplified gene in thyroid anaplastic cancer;)
genome : 33,448,849 - 33,454,937 (6,089)
query : 1 - 1,221 (1,221/1,243)
3 exons
identity = 0.999
3'(1.000;0.995;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
,
EC 3.1.3.48
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000340 : Dual specificity phosphatase, catalytic domain
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR020405 : Atypical dual specificity phosphatase, subfamily A
IPR020417 : Atypical dual specificity phosphatase
IPR020422 : Dual specificity phosphatase, subgroup, catalytic domain
IPR024950 : Dual specificity phosphatase
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0008138 : Molecular Function : protein tyrosine/serine/threonine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15, nucl 6, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007448)
HIX0007448
HIT000330039
(
AB237597
)
(Dual specificity protein phosphatase 26; EC=3.1.3.16; EC=3.1.3.48; Dual specificity phosphatase SKRP3; Low-molecular-mass dual-specificity phosphatase 4; DSP-4; LDP-4; Mitogen-activated protein kinase phosphatase 8; MAP kinase phosphatase 8; MKP-8; Novel amplified gene in thyroid anaplastic cancer;)
genome : 33,448,849 - 33,457,436 (8,588)
query : 1 - 1,649 (1,649/1,665)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
,
EC 3.1.3.48
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000340 : Dual specificity phosphatase, catalytic domain
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR020405 : Atypical dual specificity phosphatase, subfamily A
IPR020417 : Atypical dual specificity phosphatase
IPR020422 : Dual specificity phosphatase, subgroup, catalytic domain
IPR024950 : Dual specificity phosphatase
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0008138 : Molecular Function : protein tyrosine/serine/threonine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007448)
HIX0007448
HIT000030516
(
BC001613
)
(Dual specificity protein phosphatase 26; EC=3.1.3.16; EC=3.1.3.48; Dual specificity phosphatase SKRP3; Low-molecular-mass dual-specificity phosphatase 4; DSP-4; LDP-4; Mitogen-activated protein kinase phosphatase 8; MAP kinase phosphatase 8; MKP-8; Novel amplified gene in thyroid anaplastic cancer;)
genome : 33,448,855 - 33,457,439 (8,585)
query : 1 - 1,645 (1,645/1,665)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
,
EC 3.1.3.48
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000340 : Dual specificity phosphatase, catalytic domain
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR020405 : Atypical dual specificity phosphatase, subfamily A
IPR020417 : Atypical dual specificity phosphatase
IPR020422 : Dual specificity phosphatase, subgroup, catalytic domain
IPR024950 : Dual specificity phosphatase
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0008138 : Molecular Function : protein tyrosine/serine/threonine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007448)
HIX0007448
HIT000209058 (
NM_024025
)
(Dual specificity protein phosphatase 26; EC=3.1.3.16; EC=3.1.3.48; Dual specificity phosphatase SKRP3; Low-molecular-mass dual-specificity phosphatase 4; DSP-4; LDP-4; Mitogen-activated protein kinase phosphatase 8; MAP kinase phosphatase 8; MKP-8; Novel amplified gene in thyroid anaplastic cancer;)
genome : 33,448,855 - 33,457,439 (8,585)
query : 1 - 1,645 (1,645/1,665)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
,
EC 3.1.3.48
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 3, cyto 3, cyto_nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007448)
HIX0007448
HIT000258850
(
AY902194
)
(Dual specificity protein phosphatase 26; EC=3.1.3.16; EC=3.1.3.48; Dual specificity phosphatase SKRP3; Low-molecular-mass dual-specificity phosphatase 4; DSP-4; LDP-4; Mitogen-activated protein kinase phosphatase 8; MAP kinase phosphatase 8; MKP-8; Novel amplified gene in thyroid anaplastic cancer;)
genome : 33,448,855 - 33,457,439 (8,585)
query : 1 - 1,645 (1,645/1,665)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
,
EC 3.1.3.48
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000340 : Dual specificity phosphatase, catalytic domain
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR020405 : Atypical dual specificity phosphatase, subfamily A
IPR020417 : Atypical dual specificity phosphatase
IPR020422 : Dual specificity phosphatase, subgroup, catalytic domain
IPR024950 : Dual specificity phosphatase
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0008138 : Molecular Function : protein tyrosine/serine/threonine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007448)
HIX0007448
HIT000328639
(
AB103376
)
(Dual specificity protein phosphatase 26; EC=3.1.3.16; EC=3.1.3.48; Dual specificity phosphatase SKRP3; Low-molecular-mass dual-specificity phosphatase 4; DSP-4; LDP-4; Mitogen-activated protein kinase phosphatase 8; MAP kinase phosphatase 8; MKP-8; Novel amplified gene in thyroid anaplastic cancer;)
genome : 33,448,855 - 33,457,439 (8,585)
query : 1 - 1,645 (1,645/1,665)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
,
EC 3.1.3.48
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000340 : Dual specificity phosphatase, catalytic domain
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR020405 : Atypical dual specificity phosphatase, subfamily A
IPR020417 : Atypical dual specificity phosphatase
IPR020422 : Dual specificity phosphatase, subgroup, catalytic domain
IPR024950 : Dual specificity phosphatase
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0008138 : Molecular Function : protein tyrosine/serine/threonine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007448)
HIX0007448
HIT000262772
(
BC067804
)
(Dual specificity protein phosphatase 26; EC=3.1.3.16; EC=3.1.3.48; Dual specificity phosphatase SKRP3; Low-molecular-mass dual-specificity phosphatase 4; DSP-4; LDP-4; Mitogen-activated protein kinase phosphatase 8; MAP kinase phosphatase 8; MKP-8; Novel amplified gene in thyroid anaplastic cancer;)
genome : 33,448,855 - 33,457,294 (8,440)
query : 1 - 1,497 (1,497/1,511)
4 exons
identity = 0.999
3'(0.999;0.995;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
,
EC 3.1.3.48
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000340 : Dual specificity phosphatase, catalytic domain
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR020405 : Atypical dual specificity phosphatase, subfamily A
IPR020417 : Atypical dual specificity phosphatase
IPR020422 : Dual specificity phosphatase, subgroup, catalytic domain
IPR024950 : Dual specificity phosphatase
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0008138 : Molecular Function : protein tyrosine/serine/threonine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007448)
HIX0007448
HIT000106910 (
ENST00000256261
)
(Dual specificity protein phosphatase 26; EC=3.1.3.16; EC=3.1.3.48; Dual specificity phosphatase SKRP3; Low-molecular-mass dual-specificity phosphatase 4; DSP-4; LDP-4; Mitogen-activated protein kinase phosphatase 8; MAP kinase phosphatase 8; MKP-8; Novel amplified gene in thyroid anaplastic cancer;)
genome : 33,448,856 - 33,457,624 (8,769)
query : 1 - 1,829 (1,829/1,829)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
,
EC 3.1.3.48
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007448)
HIX0007448
HIT000012318
(
AK055704
)
(Dual specificity protein phosphatase 26; EC=3.1.3.16; EC=3.1.3.48; Dual specificity phosphatase SKRP3; Low-molecular-mass dual-specificity phosphatase 4; DSP-4; LDP-4; Mitogen-activated protein kinase phosphatase 8; MAP kinase phosphatase 8; MKP-8; Novel amplified gene in thyroid anaplastic cancer;)
genome : 33,448,856 - 33,457,501 (8,646)
query : 1 - 1,703 (1,703/1,703)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
,
EC 3.1.3.48
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000340 : Dual specificity phosphatase, catalytic domain
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR020405 : Atypical dual specificity phosphatase, subfamily A
IPR020417 : Atypical dual specificity phosphatase
IPR020422 : Dual specificity phosphatase, subgroup, catalytic domain
IPR024950 : Dual specificity phosphatase
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0008138 : Molecular Function : protein tyrosine/serine/threonine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007448)
HIX0007448
HIT000242443
(
AB158288
)
Representative transcript
(Dual specificity protein phosphatase 26; EC=3.1.3.16; EC=3.1.3.48; Dual specificity phosphatase SKRP3; Low-molecular-mass dual-specificity phosphatase 4; DSP-4; LDP-4; Mitogen-activated protein kinase phosphatase 8; MAP kinase phosphatase 8; MKP-8; Novel amplified gene in thyroid anaplastic cancer;)
genome : 33,448,856 - 33,457,501 (8,646)
query : 1 - 1,706 (1,706/1,706)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
,
EC 3.1.3.48
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000340 : Dual specificity phosphatase, catalytic domain
IPR000387 : Protein-tyrosine/Dual specificity phosphatase
IPR016130 : Protein-tyrosine phosphatase, active site
IPR020405 : Atypical dual specificity phosphatase, subfamily A
IPR020417 : Atypical dual specificity phosphatase
IPR020422 : Dual specificity phosphatase, subgroup, catalytic domain
IPR024950 : Dual specificity phosphatase
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0004725 : Molecular Function : protein tyrosine phosphatase activity
0006470 : Biological Process : protein dephosphorylation
0008138 : Molecular Function : protein tyrosine/serine/threonine phosphatase activity
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007448)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171011
Mus
sp. (Mouse) : AK009781
Rattus
sp. (Rat) : BC089954
Bos
sp. (Cow) : BC118329
Gallus
sp. (Chicken) : BX929514
Pongo
sp. (Orangutan) : CR860513
Equus
sp. (Horse) : ENSECAT00000015929
Oryzias
sp. (Medaka) : ENSORLT00000001780
Tetraodon
sp. (Tetraodon) : GSTENT00000165001
Tetraodon
sp. (Tetraodon) : GSTENT00025398001
Takifugu
sp. (Fugu) : SINFRUT00000137133
Takifugu
sp. (Fugu) : SINFRUT00000160758
Pan
sp. (Chimpanzee) : XM_001169283
Monodelphis
sp. (Opossum) : XM_001372663
Danio
sp. (Zebrafish) : XM_694337
Canis
sp. (Dog) : XM_845375
HIX0007448
HIT000623223 (
ENST00000523956
)
(Dual specificity protein phosphatase 26; EC=3.1.3.16; EC=3.1.3.48; Dual specificity phosphatase SKRP3; Low-molecular-mass dual-specificity phosphatase 4; DSP-4; LDP-4; Mitogen-activated protein kinase phosphatase 8; MAP kinase phosphatase 8; MKP-8; Novel amplified gene in thyroid anaplastic cancer;)
genome : 33,449,366 - 33,457,496 (8,131)
query : 1 - 1,373 (1,373/1,373)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
,
EC 3.1.3.48
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007448)
HIX0007448
HIT000622267 (
ENST00000522982
)
(Dual specificity protein phosphatase 26; EC=3.1.3.16; EC=3.1.3.48; Dual specificity phosphatase SKRP3; Low-molecular-mass dual-specificity phosphatase 4; DSP-4; LDP-4; Mitogen-activated protein kinase phosphatase 8; MAP kinase phosphatase 8; MKP-8; Novel amplified gene in thyroid anaplastic cancer;)
genome : 33,451,050 - 33,455,325 (4,276)
query : 1 - 729 (729/729)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.16
,
EC 3.1.3.48
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 3, nucl 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007448)
HIX0208259
HIT000622347 (
ENST00000523063
)
(Conserved hypothetical protein.)
genome : 33,462,374 - 33,896,003 (433,630)
query : 1 - 766 (766/766)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cysk 11, nucl 5, cyto_nucl 5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208259)
HIX0208821
HIT000621139 (
ENST00000521828
)
(Conserved hypothetical protein.)
genome : 33,499,099 - 33,499,457 (359)
query : 1 - 359 (359/359)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 7.5, cyto_nucl 7, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208821)
HIX0034527
HIT000092382
(
BC031351
)
Representative transcript
(Conserved hypothetical protein.)
genome : 33,537,388 - 33,538,201 (814)
query : 4 - 816 (813/831)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 10.5, cyto_mito 7.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034527)
HIX0208979
HIT000623246 (
ENST00000523979
)
(Conserved hypothetical protein.)
genome : 33,579,823 - 33,580,597 (775)
query : 1 - 775 (775/775)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.1667, nucl 9.5, cyto 7.5,
cyto_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208979)
HIX0208259
HIT000616695 (
ENST00000517292
)
(Hypothetical short protein.)
genome : 33,613,295 - 33,653,954 (40,660)
query : 1 - 272 (272/272)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208259)
HIX0208339
HIT000573236 (
ENST00000468681
)
(Ribosomal protein L6, N-terminal domain containing protein.)
genome : 33,716,998 - 33,717,741 (744)
query : 1 - 744 (744/744)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208339)
HIX0168884
HIT000133675 (
ENST00000341045
)
(Cytochrome c, class IA/ IB family protein.)
genome : 33,827,079 - 33,827,396 (318)
query : 1 - 318 (318/318)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 3, nucl 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168884)
HIX0168884
HIT000622674_02 (
ENST00000523393
)
(Cytochrome c, class IA/ IB family protein.)
genome : 33,827,085 - 33,827,397 (313)
query : 1 - 313 (313/313)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 3, nucl 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168884)
HIX0208206
HIT000621027 (
ENST00000521714
)
(Hypothetical short protein.)
genome : 33,831,219 - 33,867,113 (35,895)
query : 1 - 511 (511/511)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11.5, cyto_nucl 8.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208206)
HIX0208206
HIT000617549 (
ENST00000518163
)
(Hypothetical short protein.)
genome : 33,831,219 - 33,867,110 (35,892)
query : 1 - 411 (411/411)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, extr 9, cyto 4.5, extr_plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208206)
HIX0208259
HIT000620856 (
ENST00000521541
)
(Conserved hypothetical protein.)
genome : 33,865,374 - 33,896,441 (31,068)
query : 1 - 661 (661/661)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9.5, nucl 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208259)
HIX0208259
HIT000622617 (
ENST00000523336
)
(Conserved hypothetical protein.)
genome : 33,865,375 - 33,896,526 (31,152)
query : 1 - 784 (784/784)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 6, cyto_nucl 5.66667, cyto_pero 5.16667,
mito 5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208259)
HIX0208552
HIT000617600 (
ENST00000518217
)
(Hypothetical short protein.)
genome : 34,032,404 - 34,042,413 (10,010)
query : 1 - 537 (537/537)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208552)
HIX0208865
HIT000621756 (
ENST00000522460
)
(Hypothetical short protein.)
genome : 34,085,957 - 34,204,249 (118,293)
query : 1 - 582 (582/582)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208865)
HIX0034648
HIT000306559
(
CR749549
)
Representative transcript
(Conserved hypothetical protein.)
genome : 34,086,513 - 34,100,275 (13,763)
query : 1 - 4,631 (4,631/4,650)
2 exons
identity = 0.997
3'(0.994;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 10, extr_plas 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034648)
HIX0034648
HIT000617564 (
ENST00000518178
)
(Conserved hypothetical protein.)
genome : 34,086,812 - 34,106,464 (19,653)
query : 1 - 430 (430/430)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 9.83333, extr 9, cyto_pero 7.16667,
mito 6, nucl 4.5, extr_plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034648)
HIX0208321
HIT000567334 (
ENST00000462503
)
(Ribosomal protein L1/ribosomal biogenesis protein family protein.)
genome : 34,180,510 - 34,181,160 (651)
query : 1 - 651 (651/651)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208321)
HIX0218371
HIT000618712 (
ENST00000519356
)
(Protein of unknown function DUF2454 family protein.)
genome : 33,330,904 - 33,367,303 (36,400)
query : 1 - 1,671 (1,671/1,671)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218371)
HIX0218371
HIT000427784
(
AK308918
)
Representative transcript
(Conserved hypothetical protein.)
genome : 33,330,904 - 33,358,012 (27,109)
query : 7 - 1,216 (1,210/1,216)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 0.995
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218371)
AC104037.3
33000001-33058803 F +
NCBI
AC104027.4
33058804-33206369 F +
NCBI
AC067838.18
33206370-33281262 F +
NCBI
AC091144.12
33281263-33391479 F -
NCBI
AC013603.17
33391480-33545953 F +
NCBI
AC015779.8
33545954-33594581 F -
NCBI
AF279873.4
33594582-33889478 F +
NCBI
AC103840.2
33889479-34025440 F +
NCBI
AC087855.6
34025441-34126473 F +
NCBI
AC090993.5
34126474-34208060 F +
NCBI
AC083963.6
34208061-34288525 F -
NCBI
AC016412.12
34288526-34375079 F -
NCBI
AC090274.6
34375080-34541262 F +
NCBI
AC090097.5
34541263-34600000 F +
NCBI