bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0208634
HIT000618633 (
ENST00000519275
)
genome : 84,012,211 - 84,013,081 (871)
query : 1 - 871 (871/871)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208634)
HIX0208984
HIT000623338 (
ENST00000524071
)
genome : 84,113,187 - 84,114,666 (1,480)
query : 1 - 1,480 (1,480/1,480)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208984)
HIX0034557
HIT000095287
(
BC038578
)
genome : 84,315,993 - 84,321,131 (5,139)
query : 1 - 1,517 (1,517/1,543)
2 exons
identity = 0.999
5'(1.000;0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034557)
HIX0034557
HIT000621663 (
ENST00000522365
)
genome : 84,315,993 - 84,321,135 (5,143)
query : 1 - 1,521 (1,521/1,521)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034557)
HIX0218268
HIT000622951 (
ENST00000523678
)
genome : 84,824,948 - 85,052,518 (227,571)
query : 1 - 640 (640/640)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218268)
HIX0208783
HIT000620660 (
ENST00000521343
)
genome : 85,074,353 - 85,074,706 (354)
query : 1 - 354 (354/354)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208783)
HIX0208568
HIT000617830 (
ENST00000518452
)
genome : 85,075,684 - 85,076,799 (1,116)
query : 1 - 381 (381/381)
3 exons
identity = 0.956
3'(0.995;0.860;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208568)
HIX0007623
HIT000621905 (
ENST00000522613
)
genome : 85,095,022 - 85,441,812 (346,791)
query : 1 - 595 (595/595)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000485501 (
NM_001100392
)
genome : 85,095,453 - 85,834,077 (738,625)
query : 1 - 2,223 (2,223/2,238)
10 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000485502 (
NM_001100393
)
genome : 85,095,453 - 85,834,077 (738,625)
query : 1 - 2,191 (2,191/2,206)
9 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000020415
(
AK095560
)
genome : 85,095,502 - 85,834,071 (738,570)
query : 1 - 2,168 (2,168/2,168)
10 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000621751 (
ENST00000522455
)
genome : 85,095,502 - 85,834,071 (738,570)
query : 1 - 2,168 (2,168/2,168)
10 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000019398
(
AK094543
)
genome : 85,095,509 - 85,834,076 (738,568)
query : 1 - 2,134 (2,134/2,134)
9 exons
identity = 0.998
5'(1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000621008 (
ENST00000521695
)
genome : 85,095,509 - 85,833,866 (738,358)
query : 1 - 1,924 (1,924/1,924)
9 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000620585 (
ENST00000521268
)
genome : 85,095,578 - 85,833,866 (738,289)
query : 1 - 2,701 (2,701/2,701)
9 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000080812
(
AF495529
)
genome : 85,095,586 - 85,834,074 (738,489)
query : 2 - 2,901 (2,900/2,903)
9 exons
identity = 0.997
5'(0.997;1.000)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000080813
(
AF495530
)
genome : 85,095,586 - 85,834,074 (738,489)
query : 2 - 2,118 (2,117/2,120)
9 exons
identity = 0.997
5'(0.997;0.996)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000215120 (
NM_173848
)
genome : 85,095,586 - 85,834,077 (738,492)
query : 1 - 2,904 (2,904/2,919)
9 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000019881
(
AK095026
)
genome : 85,095,769 - 85,834,071 (738,303)
query : 1 - 2,681 (2,681/2,681)
8 exons
identity = 0.997
5'(0.996;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000617941 (
ENST00000518566
)
genome : 85,095,769 - 85,834,071 (738,303)
query : 1 - 2,682 (2,682/2,682)
8 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000617375 (
ENST00000517988
)
genome : 85,096,460 - 85,686,873 (590,414)
query : 1 - 571 (571/571)
4 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000485500 (
NM_001100391
)
genome : 85,097,100 - 85,834,077 (736,978)
query : 1 - 1,980 (1,980/1,995)
9 exons
identity = 0.999
5'(1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000041243
(
BC031090
)
genome : 85,097,110 - 85,834,077 (736,968)
query : 1 - 1,970 (1,970/1,985)
9 exons
identity = 0.998
5'(0.993;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000617032 (
ENST00000517638
)
genome : 85,097,110 - 85,834,079 (736,970)
query : 1 - 1,972 (1,972/1,972)
9 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000621938 (
ENST00000522647
)
genome : 85,097,176 - 85,441,699 (344,524)
query : 1 - 459 (459/459)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0025594
HIT000044335
(
AK124462
)
genome : 85,177,427 - 85,179,194 (1,768)
query : 1 - 1,769 (1,769/1,769)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025594)
HIX0208784
HIT000620672 (
ENST00000521355
)
genome : 85,591,033 - 85,592,077 (1,045)
query : 1 - 1,045 (1,045/1,045)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208784)
AC090095.7
84000001-84065542 F +
NCBI
AC090132.3
84065543-84259116 F -
NCBI
AC022821.9
84259117-84387523 F -
NCBI
AC016879.6
84387524-84480604 F +
NCBI
AC087209.7
84480605-84567460 F +
NCBI
AC104013.4
84567461-84687006 F +
NCBI
AC104425.5
84687007-84809533 F +
NCBI
AC015522.6
84809534-84954330 F +
NCBI
AC104940.2
84954331-85035275 F -
NCBI
AC012400.11
85035276-85156522 F +
NCBI
AC103816.2
85156523-85292801 F +
NCBI
AC092699.2
85292802-85391153 F +
NCBI
AC027043.7
85391154-85472829 F +
NCBI
AC092709.2
85472830-85600000 F +
NCBI