bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0007623
HIT000485501 (
NM_001100392
)
(RNA-binding Raly-like protein; hRALYL; Heterogeneous nuclear ribonucleoprotein C-like 3; hnRNP core protein C-like 3;)
genome : 85,095,453 - 85,834,077 (738,625)
query : 1 - 2,223 (2,223/2,238)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000485502 (
NM_001100393
)
(RNA-binding Raly-like protein; hRALYL; Heterogeneous nuclear ribonucleoprotein C-like 3; hnRNP core protein C-like 3;)
genome : 85,095,453 - 85,834,077 (738,625)
query : 1 - 2,191 (2,191/2,206)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000020415
(
AK095560
)
Representative transcript
(RNA-binding Raly-like protein; hRALYL; Heterogeneous nuclear ribonucleoprotein C-like 3; hnRNP core protein C-like 3;)
genome : 85,095,502 - 85,834,071 (738,570)
query : 1 - 2,168 (2,168/2,168)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK032086
Rattus
sp. (Rat) : BC092614
Bos
sp. (Cow) : BC123721
Gallus
sp. (Chicken) : CR385662
Danio
sp. (Zebrafish) : ENSDART00000098931
Oryzias
sp. (Medaka) : ENSORLT00000015936
Pongo
sp. (Orangutan) : ENSPPYT00000021826
Tetraodon
sp. (Tetraodon) : GSTENT00010165001
Macaca
sp. (Macaque) : XM_001094681
Pan
sp. (Chimpanzee) : XM_001163822
Monodelphis
sp. (Opossum) : XM_001366773
Equus
sp. (Horse) : XM_001489000
Canis
sp. (Dog) : XM_544154
HIX0007623
HIT000621751 (
ENST00000522455
)
(RNA-binding Raly-like protein; hRALYL; Heterogeneous nuclear ribonucleoprotein C-like 3; hnRNP core protein C-like 3;)
genome : 85,095,502 - 85,834,071 (738,570)
query : 1 - 2,168 (2,168/2,168)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000019398
(
AK094543
)
(RNA-binding Raly-like protein; hRALYL; Heterogeneous nuclear ribonucleoprotein C-like 3; hnRNP core protein C-like 3;)
genome : 85,095,509 - 85,834,076 (738,568)
query : 1 - 2,134 (2,134/2,134)
9 exons
identity = 0.998
5'(1.000;0.970;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000621008 (
ENST00000521695
)
(RNA-binding Raly-like protein; hRALYL; Heterogeneous nuclear ribonucleoprotein C-like 3; hnRNP core protein C-like 3;)
genome : 85,095,509 - 85,833,866 (738,358)
query : 1 - 1,924 (1,924/1,924)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000620585 (
ENST00000521268
)
(RNA-binding Raly-like protein; hRALYL; Heterogeneous nuclear ribonucleoprotein C-like 3; hnRNP core protein C-like 3;)
genome : 85,095,578 - 85,833,866 (738,289)
query : 1 - 2,701 (2,701/2,701)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000080812
(
AF495529
)
(RNA-binding Raly-like protein; hRALYL; Heterogeneous nuclear ribonucleoprotein C-like 3; hnRNP core protein C-like 3;)
genome : 85,095,586 - 85,834,074 (738,489)
query : 2 - 2,901 (2,900/2,903)
9 exons
identity = 0.997
5'(1.000;1.000;1.000;0.994;1.000;1.000;0.996)3'
coverage = 0.999
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000080813
(
AF495530
)
(RNA-binding Raly-like protein; hRALYL; Heterogeneous nuclear ribonucleoprotein C-like 3; hnRNP core protein C-like 3;)
genome : 85,095,586 - 85,834,074 (738,489)
query : 2 - 2,118 (2,117/2,120)
9 exons
identity = 0.997
5'(1.000;1.000;1.000;0.994;1.000;1.000;0.996)3'
coverage = 0.999
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000215120 (
NM_173848
)
(RNA-binding Raly-like protein; hRALYL; Heterogeneous nuclear ribonucleoprotein C-like 3; hnRNP core protein C-like 3;)
genome : 85,095,586 - 85,834,077 (738,492)
query : 1 - 2,904 (2,904/2,919)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000019881
(
AK095026
)
(RNA-binding Raly-like protein isoform 2.)
genome : 85,095,769 - 85,834,071 (738,303)
query : 1 - 2,681 (2,681/2,681)
8 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000617941 (
ENST00000518566
)
(RNA-binding Raly-like protein isoform 2.)
genome : 85,095,769 - 85,834,071 (738,303)
query : 1 - 2,682 (2,682/2,682)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000617375 (
ENST00000517988
)
(RNA-binding Raly-like protein isoform 1.)
genome : 85,096,460 - 85,686,873 (590,414)
query : 1 - 571 (571/571)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000485500 (
NM_001100391
)
(RNA-binding Raly-like protein; hRALYL; Heterogeneous nuclear ribonucleoprotein C-like 3; hnRNP core protein C-like 3;)
genome : 85,097,100 - 85,834,077 (736,978)
query : 1 - 1,980 (1,980/1,995)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000041243
(
BC031090
)
(RNA-binding Raly-like protein; hRALYL; Heterogeneous nuclear ribonucleoprotein C-like 3; hnRNP core protein C-like 3;)
genome : 85,097,110 - 85,834,077 (736,968)
query : 1 - 1,970 (1,970/1,985)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000617032 (
ENST00000517638
)
(RNA-binding Raly-like protein; hRALYL; Heterogeneous nuclear ribonucleoprotein C-like 3; hnRNP core protein C-like 3;)
genome : 85,097,110 - 85,834,079 (736,970)
query : 1 - 1,972 (1,972/1,972)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0208784
HIT000620672 (
ENST00000521355
)
(Conserved hypothetical protein.)
genome : 85,591,033 - 85,592,077 (1,045)
query : 1 - 1,045 (1,045/1,045)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208784)
HIX0007623
HIT000043310
(
AK123437
)
(RNA-binding Raly-like protein isoform 2.)
genome : 85,618,162 - 85,834,076 (215,915)
query : 1 - 1,684 (1,684/1,684)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000623119 (
ENST00000523850
)
(RNA-binding Raly-like protein isoform 2.)
genome : 85,618,162 - 85,834,076 (215,915)
query : 1 - 1,684 (1,684/1,684)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000620693 (
ENST00000521376
)
(RNA-binding Raly-like protein isoform 2.)
genome : 85,618,171 - 85,834,079 (215,909)
query : 1 - 1,457 (1,457/1,457)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0208429
HIT000606756 (
ENST00000506703
)
(Acyl-CoA N-acyltransferase domain containing protein.)
genome : 85,740,808 - 85,741,714 (907)
query : 1 - 541 (541/541)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208429)
HIX0208806
HIT000620910 (
ENST00000521595
)
(Peptidase C50, separase family protein.)
genome : 85,776,903 - 85,777,142 (240)
query : 1 - 240 (240/240)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, nucl 2.5, cyto_nucl 2.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208806)
HIX0007623
HIT000617451 (
ENST00000518065
)
(RNA-binding Raly-like protein isoform 2.)
genome : 85,784,717 - 85,833,717 (49,001)
query : 1 - 1,505 (1,505/1,505)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 8.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0007623
HIT000065790
(
AF070623
)
(RNA-binding Raly-like protein isoform 2.)
genome : 85,785,528 - 85,834,077 (48,550)
query : 1 - 1,227 (1,227/1,249)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007623)
HIX0208686
HIT000619382 (
ENST00000520036
)
(Actin family protein.)
genome : 85,860,820 - 85,861,909 (1,090)
query : 1 - 1,090 (1,090/1,090)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, nucl 9, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208686)
HIX0208881
HIT000621972 (
ENST00000522682
)
(Immunoglobulin J chain family protein.)
genome : 85,892,308 - 85,892,782 (475)
query : 1 - 475 (475/475)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, extr 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208881)
HIX0208847
HIT000621470 (
ENST00000522168
)
(Conserved hypothetical protein.)
genome : 85,998,850 - 85,999,421 (572)
query : 1 - 572 (572/572)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208847)
HIX0007624
HIT000494858
(
AK300234
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1;)
genome : 86,019,323 - 86,047,151 (27,829)
query : 2 - 1,478 (1,477/1,478)
10 exons
identity = 0.993
5'(0.997;1.000;1.000;1.000;0.995;1.000;0.852;
1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001611 : Leucine-rich repeat
IPR003603 : U2A'/phosphoprotein 32 family A, C-terminal
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 14.5, nucl 11.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0007624
HIT000317692 (
NM_033402
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1; Centrosomal leucine-rich repeat and coiled-coil domain-containing protein;)
genome : 86,019,323 - 86,058,315 (38,993)
query : 1 - 3,876 (3,876/3,876)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 7, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0007624
HIT000313767 (
ENST00000360375
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1; Centrosomal leucine-rich repeat and coiled-coil domain-containing protein;)
genome : 86,019,382 - 86,058,311 (38,930)
query : 1 - 3,813 (3,813/3,813)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 7, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0007624
HIT000041110
(
BC030701
)
Representative transcript
(Leucine-rich repeat and coiled-coil domain-containing protein 1; Centrosomal leucine-rich repeat and coiled-coil domain-containing protein;)
genome : 86,019,450 - 86,058,311 (38,862)
query : 1 - 3,745 (3,745/3,814)
19 exons
identity = 0.999
5'(1.000;1.000;0.985;1.000;1.000;1.000;0.995;
1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR003603 : U2A'/phosphoprotein 32 family A, C-terminal
IPR025875 : Leucine rich repeat 4
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14, nucl 6.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0007624
HIT000621860 (
ENST00000522567
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1.)
genome : 86,019,450 - 86,050,409 (30,960)
query : 1 - 2,122 (2,122/2,122)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 11, nucl 6.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0007624
HIT000264050
(
BC070092
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1; Centrosomal leucine-rich repeat and coiled-coil domain-containing protein;)
genome : 86,019,464 - 86,057,820 (38,357)
query : 1 - 3,239 (3,239/3,256)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001611 : Leucine-rich repeat
IPR003603 : U2A'/phosphoprotein 32 family A, C-terminal
IPR025875 : Leucine rich repeat 4
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 7, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0007624
HIT000497272
(
AK302648
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1; Centrosomal leucine-rich repeat and coiled-coil domain-containing protein;)
genome : 86,019,473 - 86,057,935 (38,463)
query : 1 - 3,341 (3,341/3,341)
19 exons
identity = 0.997
5'(0.994;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000;0.981)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR003603 : U2A'/phosphoprotein 32 family A, C-terminal
IPR025875 : Leucine rich repeat 4
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF421192
Mus
sp. (Mouse) : AK004646
Bos
sp. (Cow) : BC114854
Gallus
sp. (Chicken) : CR389519
Equus
sp. (Horse) : ENSECAT00000015769
Monodelphis
sp. (Opossum) : ENSMODT00000007582
Oryzias
sp. (Medaka) : ENSORLT00000022442
Pongo
sp. (Orangutan) : ENSPPYT00000021827
Tetraodon
sp. (Tetraodon) : GSTENT00001841001
Takifugu
sp. (Fugu) : SINFRUT00000168781
Macaca
sp. (Macaque) : XM_001096398
Pan
sp. (Chimpanzee) : XM_001163929
Canis
sp. (Dog) : XM_544157
Danio
sp. (Zebrafish) : XM_685289
HIX0007624
HIT000012799
(
AK056185
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1.)
genome : 86,019,473 - 86,050,405 (30,933)
query : 1 - 2,800 (2,800/2,800)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR003603 : U2A'/phosphoprotein 32 family A, C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 8, mito 2, pero 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0007624
HIT000622058 (
ENST00000522770
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1.)
genome : 86,019,473 - 86,050,405 (30,933)
query : 1 - 2,800 (2,800/2,800)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 8, mito 2, pero 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0007624
HIT000495498
(
AK300874
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1.)
genome : 86,019,473 - 86,050,309 (30,837)
query : 1 - 2,385 (2,385/2,385)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR003603 : U2A'/phosphoprotein 32 family A, C-terminal
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0007624
HIT000617266 (
ENST00000517875
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1.)
genome : 86,019,473 - 86,050,309 (30,837)
query : 1 - 2,385 (2,385/2,385)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0007624
HIT000426502
(
AK307636
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1.)
genome : 86,019,473 - 86,050,296 (30,824)
query : 1 - 2,362 (2,362/2,362)
15 exons
identity = 0.995
5'(0.938;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR003603 : U2A'/phosphoprotein 32 family A, C-terminal
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 6.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0007624
HIT000426216
(
AK307350
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1.)
genome : 86,019,473 - 86,044,165 (24,693)
query : 1 - 1,004 (1,004/1,004)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, extr 12, cyto 10.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0007624
HIT000622942 (
ENST00000523669
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1.)
genome : 86,019,473 - 86,044,165 (24,693)
query : 1 - 1,004 (1,004/1,004)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, extr 12, cyto 10.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0007624
HIT000426309
(
AK307443
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1.)
genome : 86,019,475 - 86,050,409 (30,935)
query : 1 - 2,097 (2,097/2,097)
13 exons
identity = 0.999
5'(1.000;1.000;0.994;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, extr 12, cyto 9.5, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0007624
HIT000001480
(
AB051551
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1.)
genome : 86,020,897 - 86,058,312 (37,416)
query : 1 - 4,490 (4,490/4,490)
18 exons
identity = 0.998
5'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.991)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 16, extr 7, golg 4, mito_pero 2.5, plas 2,
mito 2, cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0007624
HIT000512560 (
ENST00000414626
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1.)
genome : 86,020,897 - 86,058,311 (37,415)
query : 1 - 4,493 (4,493/4,493)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 15, extr 8, golg 4, mito_pero 2.5, plas 2,
mito 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0007624
HIT000014597
(
AK057990
)
(Leucine-rich repeat and coiled-coil domain-containing protein 1.)
genome : 86,041,526 - 86,058,312 (16,787)
query : 1 - 2,124 (2,124/2,124)
10 exons
identity = 0.997
5'(1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15.8333, cyto_pero 13.1667,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007624)
HIX0218288
HIT000675767 (
ENST00000562577
)
(Hypothetical short protein.)
genome : 86,084,312 - 86,089,276 (4,965)
query : 1 - 487 (487/487)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218288)
HIX0034559
HIT000095508
(
BC039099
)
Representative transcript
(Conserved hypothetical protein.)
genome : 86,088,034 - 86,089,297 (1,264)
query : 1 - 1,263 (1,263/1,264)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034559)
HIX0034559
HIT000679052 (
ENST00000566000
)
(Conserved hypothetical protein.)
genome : 86,088,034 - 86,089,297 (1,264)
query : 1 - 1,264 (1,264/1,264)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034559)
HIX0201318
HIT000218313
(
U15642
)
(Transcription factor E2F5; E2F-5;)
genome : 86,089,460 - 86,126,453 (36,994)
query : 3 - 1,586 (1,584/1,587)
8 exons
identity = 0.988
5'(0.986;1.000;1.000;1.000;1.000;1.000;1.000;
0.972)3'
coverage = 0.998
InterPro :
IPR003316 : E2F/DP family, winged-helix DNA-binding domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR015633 : E2F Family
IPR028316 : Transcription factor E2F5
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005667 : Cellular Component : transcription factor complex
0006355 : Biological Process : regulation of transcription, DNA-templated
0051726 : Biological Process : regulation of cell cycle
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
HIX0201318
HIT000516864 (
ENST00000418930
)
(Transcription factor E2F5; E2F-5;)
genome : 86,089,460 - 86,126,753 (37,294)
query : 1 - 1,890 (1,890/1,890)
8 exons
identity = 0.997
5'(1.000;1.000;1.000;0.979;0.938;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
HIX0201318
HIT000219147
(
U31556
)
Representative transcript
(Transcription factor E2F5; E2F-5;)
genome : 86,089,621 - 86,126,752 (37,132)
query : 4 - 1,729 (1,726/1,739)
8 exons
identity = 0.998
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 0.998
InterPro :
IPR003316 : E2F/DP family, winged-helix DNA-binding domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR015633 : E2F Family
IPR028316 : Transcription factor E2F5
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005667 : Cellular Component : transcription factor complex
0006355 : Biological Process : regulation of transcription, DNA-templated
0051726 : Biological Process : regulation of cell cycle
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720953
Mus
sp. (Mouse) : BC003220
Danio
sp. (Zebrafish) : BC056832
Danio
sp. (Zebrafish) : BC098598
Bos
sp. (Cow) : ENSBTAT00000012342
Monodelphis
sp. (Opossum) : ENSMODT00000007513
Oryzias
sp. (Medaka) : ENSORLT00000019668
Oryzias
sp. (Medaka) : ENSORLT00000022427
Pongo
sp. (Orangutan) : ENSPPYT00000021828
Tetraodon
sp. (Tetraodon) : GSTENT00009166001
Tetraodon
sp. (Tetraodon) : GSTENT00016778001
Takifugu
sp. (Fugu) : SINFRUT00000150956
Rattus
sp. (Rat) : U31668
Macaca
sp. (Macaque) : XM_001094919
Pan
sp. (Chimpanzee) : XM_001169141
Equus
sp. (Horse) : XM_001490006
Canis
sp. (Dog) : XM_848740
HIX0201318
HIT000198880 (
NM_001951
)
(Transcription factor E2F5; E2F-5;)
genome : 86,089,619 - 86,126,752 (37,134)
query : 1 - 1,733 (1,733/1,743)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16, nucl 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
HIX0201318
HIT000398251 (
NM_001083588
)
(Transcription factor E2F5; E2F-5;)
genome : 86,089,619 - 86,126,752 (37,134)
query : 1 - 1,730 (1,730/1,740)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16, nucl 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
HIX0201318
HIT000106894 (
ENST00000256117
)
(Transcription factor E2F5; E2F-5;)
genome : 86,089,619 - 86,126,751 (37,133)
query : 1 - 1,735 (1,735/1,735)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
HIX0201318
HIT000514208 (
ENST00000416274
)
(Transcription factor E2F5; E2F-5;)
genome : 86,089,622 - 86,126,750 (37,129)
query : 1 - 1,728 (1,728/1,728)
8 exons
identity = 0.997
5'(1.000;1.000;1.000;0.979;0.938;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
HIX0201318
HIT000328142
(
Z78409
)
(Transcription factor E2F5; E2F-5;)
genome : 86,089,622 - 86,126,719 (37,098)
query : 1 - 1,697 (1,697/1,697)
8 exons
identity = 0.997
5'(0.993;1.000;0.994;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR003316 : E2F/DP family, winged-helix DNA-binding domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR015633 : E2F Family
IPR028316 : Transcription factor E2F5
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005667 : Cellular Component : transcription factor complex
0006355 : Biological Process : regulation of transcription, DNA-templated
0051726 : Biological Process : regulation of cell cycle
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
HIX0201318
HIT000324190
(
X86097
)
(Transcription factor E2F5; E2F-5;)
genome : 86,089,626 - 86,126,750 (37,125)
query : 1 - 1,724 (1,724/1,748)
8 exons
identity = 0.998
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 0.999
InterPro :
IPR003316 : E2F/DP family, winged-helix DNA-binding domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR015633 : E2F Family
IPR028316 : Transcription factor E2F5
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005667 : Cellular Component : transcription factor complex
0006355 : Biological Process : regulation of transcription, DNA-templated
0051726 : Biological Process : regulation of cell cycle
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
HIX0208693
HIT000619472 (
ENST00000520129
)
(Conserved hypothetical protein.)
genome : 86,089,757 - 86,090,385 (629)
query : 1 - 468 (468/468)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208693)
HIX0201318
HIT000329120
(
AB209185
)
(Transcription factor E2F4; E2F-4;)
genome : 86,089,847 - 86,129,387 (39,541)
query : 1 - 4,696 (4,696/4,696)
9 exons
identity = 0.990
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.975;
0.992;1.000)3'
coverage = 1.000
InterPro :
IPR003316 : E2F/DP family, winged-helix DNA-binding domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR015633 : E2F Family
IPR028316 : Transcription factor E2F5
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005667 : Cellular Component : transcription factor complex
0006355 : Biological Process : regulation of transcription, DNA-templated
0051726 : Biological Process : regulation of cell cycle
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11.5, extr 7, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
HIX0201318
HIT000618491 (
ENST00000519128
)
(Transcription factor E2F5; E2F-5; Fragment;)
genome : 86,089,847 - 86,129,387 (39,541)
query : 1 - 5,036 (5,036/5,036)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;0.979;0.938;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11.5, extr 7, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
HIX0201318
HIT000398252 (
NM_001083589
)
(Transcription factor E2F5; E2F-5;)
genome : 86,099,910 - 86,126,752 (26,843)
query : 1 - 1,584 (1,584/1,594)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 12, cyto_nucl 10, nucl 9, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
HIX0201318
HIT000620746 (
ENST00000521429
)
(Transcription factor E2F5; E2F-5;)
genome : 86,099,920 - 86,126,725 (26,806)
query : 1 - 1,551 (1,551/1,551)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
HIX0201318
HIT000616873 (
ENST00000517476
)
(Transcription factor E2F5; E2F-5;)
genome : 86,099,920 - 86,126,272 (26,353)
query : 1 - 1,094 (1,094/1,094)
8 exons
identity = 0.995
5'(1.000;1.000;1.000;0.979;0.938;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 12, cyto_nucl 10, nucl 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
HIX0201318
HIT000620551 (
ENST00000521234
)
(Transcription factor E2F5; E2F-5;)
genome : 86,114,020 - 86,115,497 (1,478)
query : 1 - 641 (641/641)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 11.5, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
HIX0201318
HIT000617617 (
ENST00000518234
)
(Transcription factor E2F5; E2F-5;)
genome : 86,118,398 - 86,128,438 (10,041)
query : 1 - 674 (674/674)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 13.5, cyto 10.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
HIX0201318
HIT000619566 (
ENST00000520225
)
(Transcription factor E2F5; E2F-5;)
genome : 86,121,448 - 86,126,753 (5,306)
query : 1 - 604 (604/604)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 9.5, plas 7, pero 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201318)
HIX0021836
HIT000259494
(
BC055092
)
Representative transcript
(Uncharacterized protein C8orf59;)
genome : 86,126,288 - 86,132,603 (6,316)
query : 5 - 886 (882/915)
4 exons
identity = 0.993
3'(0.990;1.000;1.000;1.000)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171755
Mus
sp. (Mouse) : AK007585
Bos
sp. (Cow) : BC108159
Equus
sp. (Horse) : ENSECAT00000014301
Monodelphis
sp. (Opossum) : ENSMODT00000038148
Rattus
sp. (Rat) : XM_001053477
Pan
sp. (Chimpanzee) : XM_001169284
Canis
sp. (Dog) : XM_535116
HIX0021836
HIT000485407 (
NM_001099670
)
(Uncharacterized protein C8orf59;)
genome : 86,126,288 - 86,132,643 (6,356)
query : 1 - 1,050 (1,050/1,050)
5 exons
identity = 0.994
3'(0.990;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000485408 (
NM_001099671
)
(Uncharacterized protein C8orf59;)
genome : 86,126,288 - 86,132,643 (6,356)
query : 1 - 1,047 (1,047/1,047)
5 exons
identity = 0.994
3'(0.990;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000485409 (
NM_001099672
)
(Uncharacterized protein C8orf59;)
genome : 86,126,288 - 86,132,643 (6,356)
query : 1 - 963 (963/963)
5 exons
identity = 0.994
3'(0.990;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000485410 (
NM_001099673
)
(Uncharacterized protein C8orf59;)
genome : 86,126,288 - 86,132,643 (6,356)
query : 1 - 922 (922/922)
4 exons
identity = 0.993
3'(0.990;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000515597 (
ENST00000417663
)
(Uncharacterized protein C8orf59;)
genome : 86,126,311 - 86,132,603 (6,293)
query : 1 - 853 (853/853)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000503233
(
BC146983
)
(Uncharacterized protein C8orf59;)
genome : 86,126,311 - 86,132,596 (6,286)
query : 1 - 852 (852/852)
4 exons
identity = 0.993
3'(0.989;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000503236
(
BC146988
)
(Uncharacterized protein C8orf59;)
genome : 86,126,311 - 86,132,596 (6,286)
query : 1 - 852 (852/852)
4 exons
identity = 0.993
3'(0.989;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000503380
(
BC157825
)
(Uncharacterized protein C8orf59;)
genome : 86,126,311 - 86,132,596 (6,286)
query : 1 - 852 (852/852)
4 exons
identity = 0.992
3'(0.987;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000503604
(
BC171873
)
(Uncharacterized protein C8orf59;)
genome : 86,126,312 - 86,132,596 (6,285)
query : 1 - 733 (733/733)
3 exons
identity = 0.990
3'(0.989;0.991;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 7, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000529097 (
ENST00000431163
)
(Uncharacterized protein C8orf59;)
genome : 86,126,312 - 86,132,596 (6,285)
query : 1 - 728 (728/728)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000260289
(
BC062221
)
(Uncharacterized protein C8orf59;)
genome : 86,126,741 - 86,132,603 (5,863)
query : 5 - 474 (470/506)
5 exons
identity = 0.985
3'(0.952;0.991;1.000;1.000;1.000)5'
coverage = 0.985
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12.5, cyto 7.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000519242 (
ENST00000421308
)
(Uncharacterized protein C8orf59;)
genome : 86,126,722 - 86,132,613 (5,892)
query : 1 - 580 (580/580)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000617937 (
ENST00000518562
)
(Uncharacterized protein C8orf59;)
genome : 86,126,737 - 86,132,650 (5,914)
query : 1 - 485 (485/485)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000623615 (
ENST00000524353
)
(Uncharacterized protein C8orf59;)
genome : 86,126,737 - 86,132,604 (5,868)
query : 1 - 469 (469/469)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000619577 (
ENST00000520236
)
(Uncharacterized protein C8orf59;)
genome : 86,126,737 - 86,127,363 (627)
query : 1 - 338 (338/338)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 14, extr 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000617477 (
ENST00000518091
)
(Uncharacterized protein C8orf59;)
genome : 86,126,738 - 86,129,931 (3,194)
query : 1 - 557 (557/557)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000556332 (
ENST00000458398
)
(Uncharacterized protein C8orf59;)
genome : 86,126,791 - 86,132,582 (5,792)
query : 1 - 477 (477/477)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000622563 (
ENST00000523281
)
(Uncharacterized protein C8orf59;)
genome : 86,127,244 - 86,131,551 (4,308)
query : 1 - 756 (756/756)
3 exons
identity = 0.995
3'(1.000;1.000;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, cyto 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000622527 (
ENST00000523245
)
(Uncharacterized protein C8orf59;)
genome : 86,129,042 - 86,132,643 (3,602)
query : 1 - 799 (799/799)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000041503
(
BC032347
)
(Uncharacterized protein C8orf59;)
genome : 86,129,391 - 86,132,568 (3,178)
query : 1 - 323 (323/363)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000122898 (
ENST00000321777
)
(Uncharacterized protein C8orf59;)
genome : 86,129,389 - 86,132,568 (3,180)
query : 1 - 325 (325/325)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000644367 (
ENST00000545322
)
(Uncharacterized protein C8orf59;)
genome : 86,129,613 - 86,132,643 (3,031)
query : 1 - 228 (228/244)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.934
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000618157 (
ENST00000518786
)
(Non-protein coding transcript.)
genome : 86,130,855 - 86,132,623 (1,769)
query : 1 - 827 (827/827)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0021836
HIT000620603 (
ENST00000521286
)
(Conserved hypothetical protein.)
genome : 86,130,900 - 86,132,603 (1,704)
query : 1 - 759 (759/759)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto_nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021836)
HIX0007627
HIT000617222 (
ENST00000517831
)
(Conserved hypothetical protein.)
genome : 86,132,816 - 86,163,026 (30,211)
query : 1 - 865 (865/865)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11.5, cyto_nucl 8, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007627)
HIX0007627
HIT000616701 (
ENST00000517298
)
(Carbonic anhydrase 13.)
genome : 86,132,845 - 86,180,856 (48,012)
query : 1 - 1,400 (1,400/1,400)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 16.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007627)
HIX0007627
HIT000621923 (
ENST00000522631
)
(Hypothetical short protein.)
genome : 86,133,156 - 86,142,565 (9,410)
query : 1 - 700 (700/700)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007627)
HIX0218175
HIT000660738 (
ENST00000546501
)
(Conserved hypothetical protein.)
genome : 86,134,675 - 86,141,245 (6,571)
query : 1 - 589 (589/589)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218175)
HIX0218175
HIT000663178 (
ENST00000549291
)
(Conserved hypothetical protein.)
genome : 86,134,960 - 86,157,946 (22,987)
query : 1 - 790 (790/790)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14, cyto 10, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218175)
HIX0007627
HIT000617773 (
ENST00000518392
)
(Hypothetical short protein.)
genome : 86,142,392 - 86,142,944 (553)
query : 1 - 461 (461/461)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007627)
HIX0007627
HIT000319438 (
NM_198584
)
(Carbonic anhydrase 13; EC=4.2.1.1; Carbonate dehydratase XIII; Carbonic anhydrase XIII; CA-XIII;)
genome : 86,157,716 - 86,196,302 (38,587)
query : 1 - 3,855 (3,855/3,855)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007627)
HIX0007627
HIT000122895 (
ENST00000321764
)
(Carbonic anhydrase 13; EC=4.2.1.1; Carbonate dehydratase XIII; Carbonic anhydrase XIII; CA-XIII;)
genome : 86,157,756 - 86,196,302 (38,547)
query : 1 - 3,815 (3,815/3,815)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007627)
HIX0007627
HIT000053811
(
BC052602
)
(Carbonic anhydrase 13; EC=4.2.1.1; Carbonate dehydratase XIII; Carbonic anhydrase XIII; CA-XIII;)
genome : 86,157,756 - 86,193,724 (35,969)
query : 1 - 1,237 (1,237/1,237)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007627)
HIX0007627
HIT000020169
(
AK095314
)
Representative transcript
(Carbonic anhydrase 13; EC=4.2.1.1; Carbonate dehydratase XIII; Carbonic anhydrase XIII; CA-XIII;)
genome : 86,158,007 - 86,196,302 (38,296)
query : 1 - 3,564 (3,564/3,564)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007627)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK150871
Gallus
sp. (Chicken) : BX934845
Tetraodon
sp. (Tetraodon) : CR720949
Pongo
sp. (Orangutan) : CR859710
Equus
sp. (Horse) : ENSECAT00000013911
Oryzias
sp. (Medaka) : ENSORLT00000010478
Takifugu
sp. (Fugu) : SINFRUT00000168660
Danio
sp. (Zebrafish) : U55177
Macaca
sp. (Macaque) : XM_001095487
Pan
sp. (Chimpanzee) : XM_001169377
Monodelphis
sp. (Opossum) : XM_001366712
Canis
sp. (Dog) : XM_544159
Rattus
sp. (Rat) : XM_574890
Bos
sp. (Cow) : XM_591606
HIX0218278
HIT000665088 (
ENST00000551479
)
(Conserved hypothetical protein.)
genome : 86,158,524 - 86,158,792 (269)
query : 17 - 285 (269/285)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 0.944
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 3, nucl 2.5, cyto 2.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218278)
HIX0007626
HIT000195538
(
M33987
)
Representative transcript
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,239,837 - 86,291,243 (51,407)
query : 1 - 2,785 (2,785/2,785)
9 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;0.992;0.990;1.000;
0.931;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR018442 : Carbonic anhydrase, CA1
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0005737 : Cellular Component : cytoplasm
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
Ortholog candidate ( ->
Evola
)
Monodelphis
sp. (Opossum) : AJ417908
Mus
sp. (Mouse) : AK146372
Bos
sp. (Cow) : BC116126
Tetraodon
sp. (Tetraodon) : CR720949
Equus
sp. (Horse) : ENSECAT00000010207
Gallus
sp. (Chicken) : ENSGALT00000030849
Oryzias
sp. (Medaka) : ENSORLT00000010478
Pongo
sp. (Orangutan) : ENSPPYT00000021832
Pan
sp. (Chimpanzee) : L11621
Macaca
sp. (Macaque) : L25082
Canis
sp. (Dog) : NM_001145171
Takifugu
sp. (Fugu) : SINFRUT00000127195
Danio
sp. (Zebrafish) : U55177
Rattus
sp. (Rat) : XM_001053327
Bos
sp. (Cow) : XM_001250683
Mus
sp. (Mouse) : XM_994159
HIX0007626
HIT000623220 (
ENST00000523953
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,239,837 - 86,291,243 (51,407)
query : 1 - 2,785 (2,785/2,785)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.931;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000040338
(
BC027890
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,459 - 86,290,334 (49,876)
query : 1 - 1,200 (1,200/1,307)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR018442 : Carbonic anhydrase, CA1
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0005737 : Cellular Component : cytoplasm
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000198675 (
NM_001738
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,458 - 86,290,342 (49,885)
query : 1 - 1,263 (1,263/1,278)
9 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.931;1.000)5'
coverage = 0.999
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000559492 (
NM_001128829
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,458 - 86,290,342 (49,885)
query : 1 - 1,284 (1,284/1,299)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000559493 (
NM_001128830
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,458 - 86,290,342 (49,885)
query : 1 - 1,286 (1,286/1,301)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000559494 (
NM_001128831
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,458 - 86,290,342 (49,885)
query : 1 - 1,209 (1,209/1,224)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000654137 (
NM_001164830
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,458 - 86,253,943 (13,486)
query : 1 - 1,196 (1,196/1,211)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000106895 (
ENST00000256119
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,458 - 86,264,013 (23,556)
query : 1 - 1,195 (1,195/1,195)
8 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.931)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000529250 (
ENST00000431316
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,458 - 86,262,130 (21,673)
query : 1 - 1,232 (1,232/1,232)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000641621 (
ENST00000542576
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,458 - 86,255,072 (14,615)
query : 1 - 1,236 (1,236/1,236)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000530298 (
ENST00000432364
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,458 - 86,253,943 (13,486)
query : 1 - 1,196 (1,196/1,196)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000622306 (
ENST00000523022
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,459 - 86,290,342 (49,884)
query : 1 - 1,208 (1,208/1,208)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000621687 (
ENST00000522389
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,668 - 86,253,888 (13,221)
query : 1 - 551 (551/551)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, cyto_nucl 10.5, cyto 8, mito 8, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000321111
(
X05014
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,685 - 86,253,887 (13,203)
query : 1 - 914 (914/914)
7 exons
identity = 0.996
3'(0.995;1.000;1.000;1.000;0.992;0.990;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR018442 : Carbonic anhydrase, CA1
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0005737 : Cellular Component : cytoplasm
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000620992 (
ENST00000521679
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,718 - 86,250,524 (9,807)
query : 1 - 606 (606/606)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000623587 (
ENST00000524324
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,794 - 86,290,342 (49,549)
query : 1 - 675 (675/675)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000617013 (
ENST00000517618
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,822 - 86,253,943 (13,122)
query : 1 - 832 (832/832)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000619337 (
ENST00000519991
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,240,823 - 86,290,342 (49,520)
query : 1 - 527 (527/527)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, mito 9, cyto_nucl 9, nucl 6, mito_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000622985 (
ENST00000523712
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,241,927 - 86,249,441 (7,515)
query : 1 - 574 (574/574)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000619997 (
ENST00000520663
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase I; CA-I; Fragment;)
genome : 86,241,985 - 86,290,342 (48,358)
query : 1 - 454 (454/454)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 6.5, cyto_nucl 6, nucl 4.5, extr 2,
pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000617616 (
ENST00000518233
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,244,600 - 86,255,054 (10,455)
query : 1 - 355 (355/355)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 10, cyto_nucl 10, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000616986 (
ENST00000517590
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,244,713 - 86,290,342 (45,630)
query : 1 - 689 (689/696)
7 exons
identity = 0.997
3'(0.971;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.990
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000616828 (
ENST00000517429
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,244,723 - 86,290,342 (45,620)
query : 1 - 652 (652/652)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000621157 (
ENST00000521846
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,245,756 - 86,290,337 (44,582)
query : 1 - 666 (666/666)
7 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;1.000;0.931;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000617723 (
ENST00000518341
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,245,757 - 86,290,342 (44,586)
query : 1 - 655 (655/655)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 14.5, cyto 11.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000621872 (
ENST00000522579
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,245,757 - 86,290,342 (44,586)
query : 1 - 614 (614/614)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000622100 (
ENST00000522814
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,245,759 - 86,290,342 (44,584)
query : 1 - 618 (618/618)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000621953 (
ENST00000522662
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,249,174 - 86,290,342 (41,169)
query : 1 - 501 (501/501)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000623127 (
ENST00000523858
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,249,231 - 86,290,342 (41,112)
query : 1 - 518 (518/518)
6 exons
identity = 0.992
3'(1.000;1.000;1.000;1.000;0.931;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000619437 (
ENST00000520093
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase I; CA-I;)
genome : 86,250,214 - 86,290,342 (40,129)
query : 1 - 594 (594/594)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000620312 (
ENST00000520990
)
(Carbonic anhydrase 1; EC=4.2.1.1; Carbonate dehydratase I; Carbonic anhydrase B; CAB; Carbonic anhydrase I; CA-I;)
genome : 86,250,248 - 86,290,342 (40,095)
query : 1 - 525 (525/525)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000618492 (
ENST00000519129
)
(Conserved hypothetical protein.)
genome : 86,250,649 - 86,290,342 (39,694)
query : 1 - 491 (491/491)
7 exons
identity = 0.992
3'(1.000;1.000;1.000;1.000;1.000;0.931;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0007626
HIT000620023 (
ENST00000520692
)
(Hypothetical short protein.)
genome : 86,253,644 - 86,255,029 (1,386)
query : 1 - 297 (297/297)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, extr 5, nucl 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007626)
HIX0078885
HIT000620246 (
ENST00000520921
)
(Carbonic anhydrase 3; EC=4.2.1.1; Carbonate dehydratase III; Carbonic anhydrase III; CA-III;)
genome : 86,285,665 - 86,354,359 (68,695)
query : 1 - 571 (571/571)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6.5, cyto_nucl 5.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078885)
HIX0078885
HIT000112602 (
ENST00000285381
)
(Carbonic anhydrase 3; EC=4.2.1.1; Carbonate dehydratase III; Carbonic anhydrase III; CA-III;)
genome : 86,351,056 - 86,361,269 (10,214)
query : 1 - 1,753 (1,753/1,753)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078885)
HIX0078885
HIT000201891 (
NM_005181
)
(Carbonic anhydrase 3; EC=4.2.1.1; Carbonate dehydratase III; Carbonic anhydrase III; CA-III;)
genome : 86,351,056 - 86,361,269 (10,214)
query : 1 - 1,753 (1,753/1,753)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 2, mito 2, mito_nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078885)
HIX0078885
HIT000021735
(
AK096880
)
(Carbonic anhydrase 3; EC=4.2.1.1; Carbonate dehydratase III; Carbonic anhydrase III; CA-III;)
genome : 86,351,056 - 86,361,265 (10,210)
query : 1 - 1,748 (1,748/1,748)
7 exons
identity = 0.998
5'(1.000;0.995;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR018441 : Carbonic anhydrase, CA3
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0005737 : Cellular Component : cytoplasm
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078885)
HIX0078885
HIT000495294
(
AK300670
)
(Carbonic anhydrase 3; EC=4.2.1.1; Carbonate dehydratase III; Carbonic anhydrase III; CA-III;)
genome : 86,351,087 - 86,361,166 (10,080)
query : 1 - 1,543 (1,543/1,543)
7 exons
identity = 0.997
5'(1.000;0.990;1.000;0.989;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018441 : Carbonic anhydrase, CA3
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0005737 : Cellular Component : cytoplasm
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078885)
HIX0078885
HIT000495301
(
AK300677
)
(Carbonic anhydrase 3; EC=4.2.1.1; Carbonate dehydratase III; Carbonic anhydrase III; CA-III;)
genome : 86,351,087 - 86,360,746 (9,660)
query : 1 - 1,150 (1,150/1,150)
8 exons
identity = 0.995
5'(1.000;0.982;0.969;1.000;1.000;0.984;1.000;
0.998)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR018441 : Carbonic anhydrase, CA3
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0005737 : Cellular Component : cytoplasm
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, extr 3, nucl 2, mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078885)
HIX0078885
HIT000432120
(
AK313254
)
Representative transcript
(Carbonic anhydrase 3; EC=4.2.1.1; Carbonate dehydratase III; Carbonic anhydrase III; CA-III;)
genome : 86,351,087 - 86,360,382 (9,296)
query : 1 - 835 (835/835)
7 exons
identity = 0.999
5'(0.988;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR018441 : Carbonic anhydrase, CA3
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0005737 : Cellular Component : cytoplasm
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 2, mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078885)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173817
Mus
sp. (Mouse) : AK003671
Rattus
sp. (Rat) : BC061980
Bos
sp. (Cow) : BC103260
Gallus
sp. (Chicken) : CR352666
Gallus
sp. (Chicken) : ENSGALT00000025506
Oryzias
sp. (Medaka) : ENSORLT00000015963
Pongo
sp. (Orangutan) : ENSPPYT00000021834
Pan
sp. (Chimpanzee) : ENSPTRT00000037734
Canis
sp. (Dog) : NM_001145172
Takifugu
sp. (Fugu) : SINFRUT00000168660
Danio
sp. (Zebrafish) : XM_001331435
Monodelphis
sp. (Opossum) : XM_001366608
Equus
sp. (Horse) : XM_001488538
HIX0078885
HIT000621508 (
ENST00000522207
)
(Carbonic anhydrase 3; EC=4.2.1.1; Carbonate dehydratase III; Carbonic anhydrase III; CA-III;)
genome : 86,351,087 - 86,354,662 (3,576)
query : 1 - 645 (645/645)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078885)
HIX0078885
HIT000032066
(
BC004897
)
(Carbonic anhydrase 3; EC=4.2.1.1; Carbonate dehydratase III; Carbonic anhydrase III; CA-III;)
genome : 86,351,101 - 86,361,266 (10,166)
query : 1 - 1,704 (1,704/1,734)
7 exons
identity = 0.998
5'(1.000;0.995;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR018441 : Carbonic anhydrase, CA3
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0005737 : Cellular Component : cytoplasm
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078885)
HIX0208198
HIT000617091 (
ENST00000517697
)
(Conserved hypothetical protein.)
genome : 86,354,080 - 86,376,562 (22,483)
query : 1 - 559 (559/559)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7, cyto_nucl 6.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208198)
HIX0208198
HIT000621074 (
ENST00000521761
)
(Conserved hypothetical protein.)
genome : 86,354,276 - 86,377,144 (22,869)
query : 1 - 591 (591/591)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208198)
HIX0188769
pHIT000014943 ( pHIT000014943 )
Representative transcript
(Hypothetical protein.)
genome : 86,367,769 - 86,374,400 (6,632)
query : 1 - 312 (312/312)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188769)
CAGE tag :
H15BA67P0702
HIX0208198
HIT000623319 (
ENST00000524052
)
(Non-protein coding transcript.)
genome : 86,368,852 - 86,375,283 (6,432)
query : 1 - 430 (430/430)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208198)
HIX0007628
HIT000112601 (
ENST00000285379
)
(Carbonic anhydrase 2 family protein.)
genome : 86,376,081 - 86,393,722 (17,642)
query : 1 - 1,717 (1,717/1,717)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, extr 3, E.R._mito 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000197118 (
NM_000067
)
(Carbonic anhydrase 2 family protein.)
genome : 86,376,131 - 86,393,721 (17,591)
query : 1 - 1,666 (1,666/1,666)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, extr 3, E.R._mito 3, mito_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000062298
(
AF015039
)
(Non-protein coding transcript.)
genome : 86,376,180 - 86,376,276 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000619470 (
ENST00000520127
)
(Carbonic anhydrase, alpha-class family protein.)
genome : 86,376,197 - 86,393,115 (16,919)
query : 1 - 875 (875/875)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000620318 (
ENST00000520996
)
(Alpha carbonic anhydrase domain containing protein.)
genome : 86,376,232 - 86,386,806 (10,575)
query : 1 - 684 (684/684)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 5, nucl 2.5,
extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000431844
(
AK312978
)
(Carbonic anhydrase 2 family protein.)
genome : 86,376,236 - 86,393,018 (16,783)
query : 1 - 858 (858/858)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR018443 : Carbonic anhydrase 2
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, extr 3, E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000617614 (
ENST00000518231
)
(Alpha carbonic anhydrase domain containing protein.)
genome : 86,376,240 - 86,386,205 (9,966)
query : 1 - 587 (587/587)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, mito 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000622030 (
ENST00000522742
)
(Carbonic anhydrase, alpha-class family protein.)
genome : 86,376,243 - 86,389,384 (13,142)
query : 1 - 691 (691/691)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000035559
(
BC011949
)
(Carbonic anhydrase 2 family protein.)
genome : 86,376,246 - 86,393,722 (17,477)
query : 1 - 1,552 (1,552/1,568)
7 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;0.962;0.999)3'
coverage = 1.000
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR018443 : Carbonic anhydrase 2
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, extr 3, E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000191121
(
J03037
)
Representative transcript
(Carbonic anhydrase 2 family protein.)
genome : 86,376,246 - 86,393,721 (17,476)
query : 1 - 1,551 (1,551/1,551)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR018443 : Carbonic anhydrase 2
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, extr 3, E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000195677
(
M36532
)
(Carbonic anhydrase 2 family protein.)
genome : 86,376,270 - 86,393,554 (17,285)
query : 5 - 1,363 (1,359/1,363)
7 exons
identity = 0.999
5'(0.987;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR018443 : Carbonic anhydrase 2
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, extr 3, E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000325281
(
Y00339
)
(Carbonic anhydrase 2 family protein.)
genome : 86,376,273 - 86,393,721 (17,449)
query : 1 - 1,523 (1,523/1,523)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.994;0.999)3'
coverage = 1.000
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR018443 : Carbonic anhydrase 2
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, extr 3, E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000268462
(
CR536526
)
(Carbonic anhydrase 2 family protein.)
genome : 86,376,311 - 86,393,018 (16,708)
query : 1 - 783 (783/783)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR018443 : Carbonic anhydrase 2
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, extr 3, E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000268745
(
CR541875
)
(Carbonic anhydrase 2 family protein.)
genome : 86,376,311 - 86,393,015 (16,705)
query : 1 - 780 (780/780)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR018443 : Carbonic anhydrase 2
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, extr 3, E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000093894
(
BC035424
)
(Carbonic anhydrase 2 family protein.)
genome : 86,377,500 - 86,393,722 (16,223)
query : 4 - 1,457 (1,454/1,474)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.994;1.000)3'
coverage = 0.998
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR018443 : Carbonic anhydrase 2
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000043182
(
AK123309
)
(Carbonic anhydrase, alpha-class family protein.)
genome : 86,391,445 - 86,393,721 (2,277)
query : 1 - 2,278 (2,278/2,278)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018443 : Carbonic anhydrase 2
IPR023561 : Carbonic anhydrase, alpha-class
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000216320
(
S69526
)
(Non-protein coding transcript.)
genome : 86,392,908 - 86,392,961 (54)
query : 1 - 54 (54/54)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0007628
HIT000216321
(
S69527
)
(Non-protein coding transcript.)
genome : 86,392,908 - 86,392,961 (54)
query : 1 - 53 (53/53)
1 exon
identity = 0.981
5'(0.981)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007628)
HIX0208716
HIT000619798 (
ENST00000520459
)
(Hypothetical protein.)
genome : 86,436,128 - 86,452,740 (16,613)
query : 1 - 677 (677/677)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 6, nucl 5, mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208716)
HIX0208795
HIT000620791_02 (
ENST00000521474
)
(Hypothetical protein.)
genome : 86,529,573 - 86,529,741 (169)
query : 1 - 169 (169/169)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, plas 4, mito 1.5, E.R._mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208795)
HIX0034285
HIT000080811
(
AF495523
)
Representative transcript
(Exonuclease GOR; EC=3.1.-.-; Antigen GOR; RNA exonuclease 1 homolog-like;)
genome : 86,568,671 - 86,575,268 (6,598)
query : 15 - 6,609 (6,595/6,609)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.998
EC number :
EC 3.1.-.-
InterPro :
IPR006055 : Exonuclease
IPR012337 : Ribonuclease H-like domain
IPR013520 : Exonuclease, RNase T/DNA polymerase III
GO :
0003676 : Molecular Function : nucleic acid binding
0004527 : Molecular Function : exonuclease activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034285)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : BX935818
HIX0034285
HIT000214703 (
NM_172239
)
(Exonuclease GOR; EC=3.1.-.-; Antigen GOR homolog; RNA exonuclease 1 homolog-like 1;)
genome : 86,568,695 - 86,575,726 (7,032)
query : 1 - 7,032 (7,032/7,032)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034285)
HIX0034285
HIT000360290_06 (
ENST00000379010
)
(Exonuclease GOR; EC=3.1.-.-; Antigen GOR homolog; RNA exonuclease 1 homolog-like 1;)
genome : 86,568,695 - 86,575,726 (7,032)
query : 1 - 7,032 (7,032/7,032)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034285)
HIX0168820
HIT000340203_03
(
BC112074
)
Representative transcript
(Exonuclease GOR.)
genome : 86,727,073 - 86,728,150 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR006055 : Exonuclease
IPR012337 : Ribonuclease H-like domain
IPR013520 : Exonuclease, RNase T/DNA polymerase III
GO :
0003676 : Molecular Function : nucleic acid binding
0004527 : Molecular Function : exonuclease activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168820)
HIX0168820
HIT000386906_03
(
BC113453
)
(Exonuclease GOR.)
genome : 86,727,073 - 86,728,150 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR006055 : Exonuclease
IPR012337 : Ribonuclease H-like domain
IPR013520 : Exonuclease, RNase T/DNA polymerase III
GO :
0003676 : Molecular Function : nucleic acid binding
0004527 : Molecular Function : exonuclease activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168820)
HIX0168820
HIT000486337_03 (
NR_003594
)
(Exonuclease GOR.)
genome : 86,727,073 - 86,728,150 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168820)
HIX0188686
HIT000523363_02 (
ENST00000425429
)
(Exonuclease GOR; EC=3.1.-.-; Antigen GOR homolog; RNA exonuclease 1 homolog-like 1;)
genome : 86,747,543 - 86,749,570 (2,028)
query : 1 - 2,028 (2,028/2,028)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188686)
HIX0188686
HIT000639769_02 (
ENST00000540724
)
(Exonuclease GOR; EC=3.1.-.-; Antigen GOR homolog; RNA exonuclease 1 homolog-like 1;)
genome : 86,747,543 - 86,749,570 (2,028)
query : 1 - 2,028 (2,028/2,028)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188686)
HIX0188686
HIT000340203_04
(
BC112074
)
Representative transcript
(Exonuclease GOR.)
genome : 86,748,527 - 86,749,604 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR006055 : Exonuclease
IPR012337 : Ribonuclease H-like domain
IPR013520 : Exonuclease, RNase T/DNA polymerase III
GO :
0003676 : Molecular Function : nucleic acid binding
0004527 : Molecular Function : exonuclease activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188686)
HIX0188686
HIT000386906_04
(
BC113453
)
(Exonuclease GOR.)
genome : 86,748,527 - 86,749,604 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR006055 : Exonuclease
IPR012337 : Ribonuclease H-like domain
IPR013520 : Exonuclease, RNase T/DNA polymerase III
GO :
0003676 : Molecular Function : nucleic acid binding
0004527 : Molecular Function : exonuclease activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188686)
HIX0188686
HIT000486337_04 (
NR_003594
)
(Exonuclease GOR.)
genome : 86,748,527 - 86,749,604 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188686)
HIX0188684
HIT000340203_02
(
BC112074
)
Representative transcript
(Exonuclease GOR.)
genome : 86,756,684 - 86,757,761 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR006055 : Exonuclease
IPR012337 : Ribonuclease H-like domain
IPR013520 : Exonuclease, RNase T/DNA polymerase III
GO :
0003676 : Molecular Function : nucleic acid binding
0004527 : Molecular Function : exonuclease activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188684)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : BX935818
HIX0188684
HIT000386906_02
(
BC113453
)
(Exonuclease GOR.)
genome : 86,756,684 - 86,757,761 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR006055 : Exonuclease
IPR012337 : Ribonuclease H-like domain
IPR013520 : Exonuclease, RNase T/DNA polymerase III
GO :
0003676 : Molecular Function : nucleic acid binding
0004527 : Molecular Function : exonuclease activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188684)
HIX0188684
HIT000486337_02 (
NR_003594
)
(Exonuclease GOR.)
genome : 86,756,684 - 86,757,761 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188684)
HIX0188684
HIT000523363_01 (
ENST00000425429
)
(Exonuclease GOR; EC=3.1.-.-; Antigen GOR homolog; RNA exonuclease 1 homolog-like 1;)
genome : 86,756,718 - 86,758,745 (2,028)
query : 1 - 2,028 (2,028/2,028)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188684)
HIX0188684
HIT000639769_01 (
ENST00000540724
)
(Exonuclease GOR; EC=3.1.-.-; Antigen GOR homolog; RNA exonuclease 1 homolog-like 1;)
genome : 86,756,718 - 86,758,745 (2,028)
query : 1 - 2,028 (2,028/2,028)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188684)
HIX0188687
HIT000340203_05
(
BC112074
)
Representative transcript
(Exonuclease GOR.)
genome : 86,787,245 - 86,788,322 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR006055 : Exonuclease
IPR012337 : Ribonuclease H-like domain
IPR013520 : Exonuclease, RNase T/DNA polymerase III
GO :
0003676 : Molecular Function : nucleic acid binding
0004527 : Molecular Function : exonuclease activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188687)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000023374
HIX0188687
HIT000386906_05
(
BC113453
)
(Exonuclease GOR.)
genome : 86,787,245 - 86,788,322 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR006055 : Exonuclease
IPR012337 : Ribonuclease H-like domain
IPR013520 : Exonuclease, RNase T/DNA polymerase III
GO :
0003676 : Molecular Function : nucleic acid binding
0004527 : Molecular Function : exonuclease activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188687)
HIX0188687
HIT000486337_05 (
NR_003594
)
(Exonuclease GOR.)
genome : 86,787,245 - 86,788,322 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188687)
HIX0188687
HIT000523363_04 (
ENST00000425429
)
(Exonuclease GOR; EC=3.1.-.-; Antigen GOR homolog; RNA exonuclease 1 homolog-like 1;)
genome : 86,787,279 - 86,789,306 (2,028)
query : 1 - 2,028 (2,028/2,028)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188687)
HIX0188687
HIT000639769_03 (
ENST00000540724
)
(Exonuclease GOR; EC=3.1.-.-; Antigen GOR homolog; RNA exonuclease 1 homolog-like 1;)
genome : 86,787,279 - 86,789,306 (2,028)
query : 1 - 2,028 (2,028/2,028)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188687)
HIX0188688
HIT000340203_06
(
BC112074
)
Representative transcript
(Exonuclease GOR.)
genome : 86,802,520 - 86,803,597 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR006055 : Exonuclease
IPR012337 : Ribonuclease H-like domain
IPR013520 : Exonuclease, RNase T/DNA polymerase III
GO :
0003676 : Molecular Function : nucleic acid binding
0004527 : Molecular Function : exonuclease activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188688)
HIX0188688
HIT000386906_06
(
BC113453
)
(Exonuclease GOR.)
genome : 86,802,520 - 86,803,597 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR006055 : Exonuclease
IPR012337 : Ribonuclease H-like domain
IPR013520 : Exonuclease, RNase T/DNA polymerase III
GO :
0003676 : Molecular Function : nucleic acid binding
0004527 : Molecular Function : exonuclease activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188688)
HIX0188688
HIT000486337_06 (
NR_003594
)
(Exonuclease GOR.)
genome : 86,802,520 - 86,803,597 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188688)
HIX0188688
HIT000523363_03 (
ENST00000425429
)
(Exonuclease GOR; EC=3.1.-.-; Antigen GOR homolog; RNA exonuclease 1 homolog-like 1;)
genome : 86,802,554 - 86,804,581 (2,028)
query : 1 - 2,028 (2,028/2,028)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188688)
HIX0188688
HIT000639769_04 (
ENST00000540724
)
(Exonuclease GOR; EC=3.1.-.-; Antigen GOR homolog; RNA exonuclease 1 homolog-like 1;)
genome : 86,802,554 - 86,804,581 (2,028)
query : 1 - 2,028 (2,028/2,028)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188688)
HIX0188689
HIT000340203_07
(
BC112074
)
Representative transcript
(Exonuclease GOR.)
genome : 86,814,713 - 86,815,790 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR006055 : Exonuclease
IPR012337 : Ribonuclease H-like domain
IPR013520 : Exonuclease, RNase T/DNA polymerase III
GO :
0003676 : Molecular Function : nucleic acid binding
0004527 : Molecular Function : exonuclease activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188689)
HIX0188689
HIT000386906_07
(
BC113453
)
(Exonuclease GOR.)
genome : 86,814,713 - 86,815,790 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR006055 : Exonuclease
IPR012337 : Ribonuclease H-like domain
IPR013520 : Exonuclease, RNase T/DNA polymerase III
GO :
0003676 : Molecular Function : nucleic acid binding
0004527 : Molecular Function : exonuclease activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188689)
HIX0188689
HIT000486337_07 (
NR_003594
)
(Exonuclease GOR.)
genome : 86,814,713 - 86,815,790 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188689)
HIX0188690
HIT000340203_08
(
BC112074
)
Representative transcript
(Exonuclease GOR.)
genome : 86,839,094 - 86,840,171 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR006055 : Exonuclease
IPR012337 : Ribonuclease H-like domain
IPR013520 : Exonuclease, RNase T/DNA polymerase III
GO :
0003676 : Molecular Function : nucleic acid binding
0004527 : Molecular Function : exonuclease activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188690)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000021837
Pan
sp. (Chimpanzee) : ENSPTRT00000059870
HIX0188690
HIT000386906_08
(
BC113453
)
(Exonuclease GOR.)
genome : 86,839,094 - 86,840,171 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR006055 : Exonuclease
IPR012337 : Ribonuclease H-like domain
IPR013520 : Exonuclease, RNase T/DNA polymerase III
GO :
0003676 : Molecular Function : nucleic acid binding
0004527 : Molecular Function : exonuclease activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188690)
HIX0188690
HIT000486337_08 (
NR_003594
)
(Exonuclease GOR.)
genome : 86,839,094 - 86,840,171 (1,078)
query : 1 - 1,078 (1,078/1,078)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 6.5, cyto_nucl 5.5,
cyto_pero 3.66667, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188690)
HIX0208556
HIT000616768 (
ENST00000517368
)
(Hypothetical short protein.)
genome : 86,851,934 - 86,920,842 (68,909)
query : 1 - 517 (517/517)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, extr 10, nucl 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208556)
HIX0208556
HIT000617649 (
ENST00000518266
)
(Hypothetical short protein.)
genome : 86,901,752 - 86,963,301 (61,550)
query : 1 - 360 (360/371)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208556)
HIX0007629
HIT000620879 (
ENST00000521564
)
(Non-protein coding transcript.)
genome : 86,999,552 - 87,111,315 (111,764)
query : 1 - 448 (448/448)
4 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007629)
HIX0208400
HIT000596539 (
ENST00000493084
)
(Ribosomal protein L44e family protein.)
genome : 87,029,048 - 87,029,355 (308)
query : 1 - 308 (308/308)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208400)
HIX0208329
HIT000570099 (
ENST00000465398
)
(Ribosomal protein L32e family protein.)
genome : 87,055,331 - 87,055,736 (406)
query : 1 - 406 (406/406)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208329)
HIX0034313
HIT000111466 (
ENST00000276616
)
(Serine/threonine-protein kinase H2; EC=2.7.11.1; Protein serine kinase H2; PSK-H2;)
genome : 87,060,602 - 87,081,926 (21,325)
query : 1 - 1,322 (1,322/1,322)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 5, mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034313)
HIX0034313
HIT000388772
(
BC126180
)
Representative transcript
(Serine/threonine-protein kinase H2; EC=2.7.11.1; Protein serine kinase H2; PSK-H2;)
genome : 87,060,602 - 87,081,926 (21,325)
query : 1 - 1,322 (1,322/1,322)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 5, mito 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034313)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000021838
Tetraodon
sp. (Tetraodon) : GSTENT00008266001
Takifugu
sp. (Fugu) : SINFRUT00000135707
Macaca
sp. (Macaque) : XM_001082162
Monodelphis
sp. (Opossum) : XM_001378867
Equus
sp. (Horse) : XM_001489877
Pan
sp. (Chimpanzee) : XM_519842
Canis
sp. (Dog) : XM_544162
Danio
sp. (Zebrafish) : XM_689906
HIX0034313
HIT000502624
(
BC144195
)
(Serine/threonine-protein kinase H2; EC=2.7.11.1; Protein serine kinase H2; PSK-H2;)
genome : 87,060,602 - 87,081,926 (21,325)
query : 1 - 1,323 (1,323/1,323)
3 exons
identity = 0.999
3'(1.000;0.999;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 5, mito 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034313)
HIX0034313
HIT000388774
(
BC126182
)
(Serine/threonine-protein kinase H2; EC=2.7.11.1; Protein serine kinase H2; PSK-H2;)
genome : 87,060,606 - 87,081,926 (21,321)
query : 1 - 1,318 (1,318/1,318)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 5, mito 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034313)
HIX0034313
HIT000083556
(
AY037806
)
(Serine/threonine-protein kinase H2; EC=2.7.11.1; Protein serine kinase H2; PSK-H2;)
genome : 87,060,691 - 87,081,851 (21,161)
query : 1 - 1,158 (1,158/1,158)
3 exons
identity = 0.999
3'(1.000;0.999;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 5, mito 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034313)
HIX0034313
HIT000211150 (
NM_033126
)
(Serine/threonine-protein kinase H2; EC=2.7.11.1; Protein serine kinase H2; PSK-H2;)
genome : 87,060,691 - 87,081,851 (21,161)
query : 1 - 1,158 (1,158/1,158)
3 exons
identity = 0.999
3'(1.000;0.999;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 5, mito 5, mito_nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034313)
HIX0034313
HIT000617368 (
ENST00000517981
)
(Serine/threonine-protein kinase H2; EC=2.7.11.1; Protein serine kinase H2; PSK-H2;)
genome : 87,076,308 - 87,100,850 (24,543)
query : 1 - 721 (721/721)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 30, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034313)
HIX0034313
HIT000622294 (
ENST00000523010
)
(Serine/threonine-protein kinase H2; EC=2.7.11.1; Protein serine kinase H2; PSK-H2;)
genome : 87,076,460 - 87,097,081 (20,622)
query : 1 - 629 (629/629)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 17.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034313)
HIX0007629
HIT000622909 (
ENST00000523635
)
(V-type proton ATPase subunit d 2.)
genome : 87,086,118 - 87,111,337 (25,220)
query : 1 - 504 (504/504)
3 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 3.6.3.14
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00195 : Photosynthesis (3)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007629)
HIX0079006
HIT000018620
(
AK093753
)
Representative transcript
(Carbonic anhydrase 13.)
genome : 86,132,845 - 86,361,265 (228,421)
query : 1 - 2,403 (2,403/2,403)
9 exons
identity = 0.993
5'(1.000;0.991;1.000;1.000;1.000;1.000;1.000;
0.954;0.991)3'
coverage = 1.000
EC number :
EC 4.2.1.1
KEGG pathway :
00910 : Nitrogen metabolism (50)
InterPro :
IPR001148 : Alpha carbonic anhydrase
IPR018338 : Carbonic anhydrase, alpha-class, conserved site
IPR023561 : Carbonic anhydrase, alpha-class
GO :
0004089 : Molecular Function : carbonate dehydratase activity
0006730 : Biological Process : one-carbon metabolic process
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 16.5, nucl 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079006)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : BX934845
HIX0188769
pHIT000014943 ( pHIT000014943 )
Representative transcript
(Hypothetical protein.)
genome : 86,367,769 - 86,374,400 (6,632)
query : 1 - 312 (312/312)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188769)
CAGE tag :
H15BA06H2302,H15BA06I1402,H15BA12C0205
H15BA67P0702
AC092709.2
85500001-85609828 F +
NCBI
AC087368.7
85609829-85709211 F +
NCBI
AC009901.6
85709212-85857437 F +
NCBI
AC091175.11
85857438-85868241 F -
NCBI
AC142447.3
85868242-85906406 F +
NCBI
AC145430.2
85906407-85942731 F +
NCBI
AC144699.1
85942732-85973314 F +
NCBI
AC091175.11
85973315-86009074 F -
NCBI
AC083962.3
86009075-86044939 F +
NCBI
AC011773.9
86044940-86170080 F +
NCBI
AC025800.10
86170081-86315346 F -
NCBI
AC084734.4
86315347-86444141 F -
NCBI
AC093331.9
86444142-86576451 F +
NCBI
150000
86576452-86726451 N
AC232323.2
86726452-86894552 F -
NCBI
AC100801.4
86894553-86997012 F +
NCBI
AC023194.9
86997013-87100000 F +
NCBI