Clickable map CGI

HIX0007632
HIT000620908 ( ENST00000521593 )
  (Cyclic nucleotide-binding domain-containing protein 1.)
  genome : 88,363,961 - 88,627,447 (263,487)
  query : 1 - 651 (651/651)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 21, cyto 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007632)

HIX0208514
HIT000538697 ( ENST00000440763 )
  (Conserved hypothetical protein.)
  genome : 88,554,214 - 88,767,923 (213,710)
  query : 1 - 709 (709/709)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 22, nucl 8.5, cyto_nucl 5.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0208514)

HIX0208514
HIT000617105 ( ENST00000517711 )
  (Conserved hypothetical protein.)
  genome : 88,578,398 - 88,746,071 (167,674)
  query : 1 - 1,044 (1,044/1,044)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 9.5, extr 7, cyto_nucl 7, cyto 3.5,
    extr_plas 3.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0208514)

HIX0208514
HIT000617871 ( ENST00000518494 )
  (Conserved hypothetical protein.)
  genome : 88,578,708 - 88,767,946 (189,239)
  query : 1 - 826 (826/826)
  5 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 28, cyto 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0208514)

HIX0208700
HIT000619546 ( ENST00000520205 )
  (Vacuolar protein sorting-associate protein Vta1/Callose synthase, N-terminal domain containing protein.)
  genome : 88,587,826 - 88,588,736 (911)
  query : 1 - 911 (911/911)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 15, cyto 15, cyto_nucl 9.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0208700)

HIX0208441
HIT000608166 ( ENST00000508226 )
  (Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain containing protein.)
  genome : 88,610,690 - 88,613,862 (3,173)
  query : 1 - 3,173 (3,173/3,173)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 19, cyto 9, cyto_nucl 6.33333, cyto_pero 5.33333
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0208441)

HIX0208991
HIT000623419 ( ENST00000524155 )
  (Conserved hypothetical protein.)
  genome : 88,800,790 - 88,801,916 (1,127)
  query : 1 - 1,127 (1,127/1,127)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 20.5, cyto_nucl 13.3333, cyto_pero 11.6667,
    extr 5, nucl 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0208991)

HIX0007633
HIT000213687 ( NM_152418 )
  (DDB1- and CUL4-associated factor 4-like protein 2; WD repeat-containing protein 21C;)
  genome : 88,882,972 - 88,886,296 (3,325)
  query : 1 - 3,325 (3,325/3,339)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 14.5, cyto_nucl 11.5, nucl 7.5, pero 4, plas 3.5
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007633)

HIX0007633
HIT000093638 ( BC035011 )
  (DDB1- and CUL4-associated factor 4-like protein 2; WD repeat-containing protein 21C;)
  genome : 88,882,972 - 88,886,225 (3,254)
  query : 1 - 3,253 (3,253/3,267)
  1 exon
  identity = 0.999
  3'(0.999)5'
  coverage = 1.000
  InterPro :
    IPR001680 : WD40 repeat
    IPR017986 : WD40-repeat-containing domain
  GO :
    0005515 : Molecular Function : protein binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 14.5, cyto_nucl 11.5, nucl 7.5, pero 4, plas 3.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007633)

HIX0007633
HIT000028419 ( AL833507 )
  Representative transcript
  (DDB1- and CUL4-associated factor 4-like protein 2; WD repeat-containing protein 21C;)
  genome : 88,882,981 - 88,886,243 (3,263)
  query : 2 - 3,262 (3,261/3,280)
  1 exon
  identity = 0.999
  3'(0.999)5'
  coverage = 1.000
  InterPro :
    IPR001680 : WD40 repeat
    IPR017986 : WD40-repeat-containing domain
  GO :
    0005515 : Molecular Function : protein binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 14.5, cyto_nucl 11.5, nucl 7.5, pero 4, plas 3.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007633)
  Ortholog candidate  ( -> Evola )
    Pongo sp. (Orangutan) : ENSPPYT00000021847
    Macaca sp. (Macaque) : XM_001083861
    Pan sp. (Chimpanzee) : XM_528183

HIX0007633
HIT000122148 ( ENST00000319675 )
  (DDB1- and CUL4-associated factor 4-like protein 2; WD repeat-containing protein 21C;)
  genome : 88,882,973 - 88,886,296 (3,324)
  query : 1 - 3,324 (3,324/3,324)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 14.5, cyto_nucl 11.5, nucl 7.5, pero 4, plas 3.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007633)

HIX0007633
HIT000022454 ( AK097600 )
  (DDB1- and CUL4-associated factor 4-like protein 2; WD repeat-containing protein 21C;)
  genome : 88,884,188 - 88,885,594 (1,407)
  query : 1 - 1,406 (1,406/1,406)
  1 exon
  identity = 0.999
  3'(0.999)5'
  coverage = 1.000
  InterPro :
    IPR001680 : WD40 repeat
    IPR017986 : WD40-repeat-containing domain
  GO :
    0005515 : Molecular Function : protein binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 17, cyto_nucl 6.83333, nucl 5.5, cyto 5,
    cyto_pero 4, mito_nucl 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007633)

HIX0007633
HIT000017961 ( AK093094 )
  (DDB1- and CUL4-associated factor 4-like protein 2; WD repeat-containing protein 21C;)
  genome : 88,884,478 - 88,886,296 (1,819)
  query : 1 - 1,817 (1,817/1,817)
  1 exon
  identity = 0.998
  3'(0.998)5'
  coverage = 1.000
  InterPro :
    IPR001680 : WD40 repeat
    IPR017986 : WD40-repeat-containing domain
  GO :
    0005515 : Molecular Function : protein binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 14.5, cyto_nucl 11.5, nucl 7.5, pero 4, plas 3.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007633)

HIX0007633
HIT000340040 ( BC111778 )
  (DDB1- and CUL4-associated factor 4-like protein 2; WD repeat-containing protein 21C;)
  genome : 88,884,875 - 88,886,295 (1,421)
  query : 1 - 1,421 (1,421/1,421)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  InterPro :
    IPR001680 : WD40 repeat
    IPR017986 : WD40-repeat-containing domain
  GO :
    0005515 : Molecular Function : protein binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 14.5, cyto_nucl 11.5, nucl 7.5, pero 4, plas 3.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007633)

HIX0218227
HIT000484235_07 ( ENST00000401371 )
  (Non-protein coding transcript.)
  genome : 88,911,501 - 89,429,329 (517,829)
  query : 1 - 89 (89/95)
  2 exons
  identity = 0.978
  3'(0.978;0.977)5'
  coverage = 0.937
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0218227)

HIX0168908
HIT000439823_03 ( DQ573292 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 88,948,332 - 88,948,361 (30)
  query : 1 - 30 (30/30)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0168908)

HIX0208548
HIT000617515 ( ENST00000518129 )
  (Conserved hypothetical protein.)
  genome : 88,986,393 - 89,031,341 (44,949)
  query : 1 - 647 (647/647)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 24, mito 4, nucl 2, E.R._mito 2, mito_pero 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0208548)

HIX0007634
HIT000025184 ( AL136588 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 89,044,237 - 89,046,790 (2,554)
  query : 1 - 2,554 (2,554/2,573)
  1 exon
  identity = 0.997
  3'(0.997)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 27, mito 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007634)
  Ortholog candidate  ( -> Evola )
    Macaca sp. (Macaque) : ENSMMUT00000018503

HIX0007635
HIT000027507 ( AL832595 )
  (Matrix metalloproteinase-16; MMP-16; EC=3.4.24.-; MMP-X2; Membrane-type matrix metalloproteinase 3; MT-MMP 3; MTMMP3; Membrane-type-3 matrix metalloproteinase; MT3-MMP; MT3MMP; Precursor;)
  genome : 89,049,461 - 89,339,776 (290,316)
  query : 2 - 6,290 (6,289/6,303)
  11 exons
  identity = 0.993
  3'(0.994;0.998;1.000;1.000;1.000;0.991;0.994;
      1.000;0.762;1.000;0.996)5'
  coverage = 1.000
  EC number :
    EC 3.4.24.-
  InterPro :
    IPR000585 : Hemopexin-like domain
    IPR001818 : Peptidase M10, metallopeptidase
    IPR002477 : Peptidoglycan binding-like
    IPR006026 : Peptidase, metallopeptidase
    IPR018486 : Hemopexin, conserved site
    IPR018487 : Hemopexin-like repeats
    IPR021158 : Peptidase M10A, cysteine switch, zinc binding site
    IPR021190 : Peptidase M10A
    IPR021805 : Peptidase M10A, matrix metallopeptidase, C-terminal
    IPR024079 : Metallopeptidase, catalytic domain
    IPR028697 : Matrix metalloproteinase-16
  GO :
    0004222 : Molecular Function : metalloendopeptidase activity
    0006508 : Biological Process : proteolysis
    0008237 : Molecular Function : metallopeptidase activity
    0008270 : Molecular Function : zinc ion binding
    0031012 : Cellular Component : extracellular matrix
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 20, E.R. 5.5, pero 4, E.R._golg 3.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007635)

HIX0007635
HIT000202588 ( NM_005941 )
  (Matrix metalloproteinase-16; MMP-16; EC=3.4.24.-; MMP-X2; Membrane-type matrix metalloproteinase 3; MT-MMP 3; MTMMP3; Membrane-type-3 matrix metalloproteinase; MT3-MMP; MT3MMP; Precursor;)
  genome : 89,049,461 - 89,339,717 (290,257)
  query : 1 - 6,334 (6,334/6,347)
  10 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000)5'
  coverage = 1.000
  EC number :
    EC 3.4.24.-
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 20, E.R. 6.5, pero 4, E.R._golg 4
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007635)

HIX0007635
HIT000221516 ( U79292 )
  (Hypothetical short protein.)
  genome : 89,051,483 - 89,053,150 (1,668)
  query : 1 - 1,668 (1,668/1,685)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 26, golg 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007635)

HIX0007635
HIT000101896 ( D85511 )
  (Matrix metalloproteinase-16; MMP-16; EC=3.4.24.-; MMP-X2; Membrane-type matrix metalloproteinase 3; MT-MMP 3; MTMMP3; Membrane-type-3 matrix metalloproteinase; MT3-MMP; MT3MMP; Precursor;)
  genome : 89,053,496 - 89,339,470 (285,975)
  query : 1 - 2,052 (2,052/2,052)
  10 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000)5'
  coverage = 1.000
  EC number :
    EC 3.4.24.-
  InterPro :
    IPR000585 : Hemopexin-like domain
    IPR001818 : Peptidase M10, metallopeptidase
    IPR002477 : Peptidoglycan binding-like
    IPR006026 : Peptidase, metallopeptidase
    IPR018486 : Hemopexin, conserved site
    IPR018487 : Hemopexin-like repeats
    IPR021158 : Peptidase M10A, cysteine switch, zinc binding site
    IPR021190 : Peptidase M10A
    IPR021805 : Peptidase M10A, matrix metallopeptidase, C-terminal
    IPR024079 : Metallopeptidase, catalytic domain
    IPR028697 : Matrix metalloproteinase-16
  GO :
    0004222 : Molecular Function : metalloendopeptidase activity
    0006508 : Biological Process : proteolysis
    0008237 : Molecular Function : metallopeptidase activity
    0008270 : Molecular Function : zinc ion binding
    0031012 : Cellular Component : extracellular matrix
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 20, E.R. 6.5, pero 4, E.R._golg 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007635)

HIX0007635
HIT000058176 ( AB009303 )
  (Matrix metalloproteinase-16; MMP-16; EC=3.4.24.-; MMP-X2; Membrane-type matrix metalloproteinase 3; MT-MMP 3; MTMMP3; Membrane-type-3 matrix metalloproteinase; MT3-MMP; MT3MMP; Precursor;)
  genome : 89,053,508 - 89,339,548 (286,041)
  query : 1 - 2,116 (2,116/2,116)
  10 exons
  identity = 0.998
  3'(0.996;1.000;1.000;1.000;1.000;0.994;1.000;
      1.000;1.000;0.992)5'
  coverage = 1.000
  EC number :
    EC 3.4.24.-
  InterPro :
    IPR000585 : Hemopexin-like domain
    IPR001818 : Peptidase M10, metallopeptidase
    IPR002477 : Peptidoglycan binding-like
    IPR006026 : Peptidase, metallopeptidase
    IPR018486 : Hemopexin, conserved site
    IPR018487 : Hemopexin-like repeats
    IPR021158 : Peptidase M10A, cysteine switch, zinc binding site
    IPR021190 : Peptidase M10A
    IPR021805 : Peptidase M10A, matrix metallopeptidase, C-terminal
    IPR024079 : Metallopeptidase, catalytic domain
    IPR028697 : Matrix metalloproteinase-16
  GO :
    0004222 : Molecular Function : metalloendopeptidase activity
    0006508 : Biological Process : proteolysis
    0008237 : Molecular Function : metallopeptidase activity
    0008270 : Molecular Function : zinc ion binding
    0031012 : Cellular Component : extracellular matrix
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 20, E.R. 6.5, pero 4, E.R._golg 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007635)

HIX0007635
HIT000263651 ( BC069500 )
  (Matrix metalloproteinase-16; MMP-16; EC=3.4.24.-; MMP-X2; Membrane-type matrix metalloproteinase 3; MT-MMP 3; MTMMP3; Membrane-type-3 matrix metalloproteinase; MT3-MMP; MT3MMP; Precursor;)
  genome : 89,053,604 - 89,339,504 (285,901)
  query : 1 - 1,978 (1,978/1,978)
  10 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000)5'
  coverage = 1.000
  EC number :
    EC 3.4.24.-
  InterPro :
    IPR000585 : Hemopexin-like domain
    IPR001818 : Peptidase M10, metallopeptidase
    IPR002477 : Peptidoglycan binding-like
    IPR006026 : Peptidase, metallopeptidase
    IPR018486 : Hemopexin, conserved site
    IPR018487 : Hemopexin-like repeats
    IPR021158 : Peptidase M10A, cysteine switch, zinc binding site
    IPR021190 : Peptidase M10A
    IPR021805 : Peptidase M10A, matrix metallopeptidase, C-terminal
    IPR024079 : Metallopeptidase, catalytic domain
    IPR028697 : Matrix metalloproteinase-16
  GO :
    0004222 : Molecular Function : metalloendopeptidase activity
    0006508 : Biological Process : proteolysis
    0008237 : Molecular Function : metallopeptidase activity
    0008270 : Molecular Function : zinc ion binding
    0031012 : Cellular Component : extracellular matrix
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 20, E.R. 6.5, pero 4, E.R._golg 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007635)

HIX0007635
HIT000265511 ( BC075004 )
  (Matrix metalloproteinase-16; MMP-16; EC=3.4.24.-; MMP-X2; Membrane-type matrix metalloproteinase 3; MT-MMP 3; MTMMP3; Membrane-type-3 matrix metalloproteinase; MT3-MMP; MT3MMP; Precursor;)
  genome : 89,053,646 - 89,339,461 (285,816)
  query : 1 - 1,893 (1,893/1,893)
  10 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000)5'
  coverage = 1.000
  EC number :
    EC 3.4.24.-
  InterPro :
    IPR000585 : Hemopexin-like domain
    IPR001818 : Peptidase M10, metallopeptidase
    IPR002477 : Peptidoglycan binding-like
    IPR006026 : Peptidase, metallopeptidase
    IPR018486 : Hemopexin, conserved site
    IPR018487 : Hemopexin-like repeats
    IPR021158 : Peptidase M10A, cysteine switch, zinc binding site
    IPR021190 : Peptidase M10A
    IPR021805 : Peptidase M10A, matrix metallopeptidase, C-terminal
    IPR024079 : Metallopeptidase, catalytic domain
    IPR028697 : Matrix metalloproteinase-16
  GO :
    0004222 : Molecular Function : metalloendopeptidase activity
    0006508 : Biological Process : proteolysis
    0008237 : Molecular Function : metallopeptidase activity
    0008270 : Molecular Function : zinc ion binding
    0031012 : Cellular Component : extracellular matrix
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 20, E.R. 6.5, pero 4, E.R._golg 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007635)

HIX0007635
HIT000265512 ( BC075005 )
  (Matrix metalloproteinase-16; MMP-16; EC=3.4.24.-; MMP-X2; Membrane-type matrix metalloproteinase 3; MT-MMP 3; MTMMP3; Membrane-type-3 matrix metalloproteinase; MT3-MMP; MT3MMP; Precursor;)
  genome : 89,053,646 - 89,339,461 (285,816)
  query : 1 - 1,893 (1,893/1,893)
  10 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000)5'
  coverage = 1.000
  EC number :
    EC 3.4.24.-
  InterPro :
    IPR000585 : Hemopexin-like domain
    IPR001818 : Peptidase M10, metallopeptidase
    IPR002477 : Peptidoglycan binding-like
    IPR006026 : Peptidase, metallopeptidase
    IPR018486 : Hemopexin, conserved site
    IPR018487 : Hemopexin-like repeats
    IPR021158 : Peptidase M10A, cysteine switch, zinc binding site
    IPR021190 : Peptidase M10A
    IPR021805 : Peptidase M10A, matrix metallopeptidase, C-terminal
    IPR024079 : Metallopeptidase, catalytic domain
    IPR028697 : Matrix metalloproteinase-16
  GO :
    0004222 : Molecular Function : metalloendopeptidase activity
    0006508 : Biological Process : proteolysis
    0008237 : Molecular Function : metallopeptidase activity
    0008270 : Molecular Function : zinc ion binding
    0031012 : Cellular Component : extracellular matrix
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 20, E.R. 6.5, pero 4, E.R._golg 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007635)

HIX0007635
HIT000433140 ( AK314274 )
  (Matrix metalloproteinase-16; MMP-16; EC=3.4.24.-; MMP-X2; Membrane-type matrix metalloproteinase 3; MT-MMP 3; MTMMP3; Membrane-type-3 matrix metalloproteinase; MT3-MMP; MT3MMP; Precursor;)
  genome : 89,053,689 - 89,339,717 (286,029)
  query : 1 - 2,106 (2,106/2,106)
  10 exons
  identity = 0.999
  3'(1.000;1.000;0.993;1.000;0.995;1.000;1.000;
      0.992;1.000;1.000)5'
  coverage = 1.000
  EC number :
    EC 3.4.24.-
  InterPro :
    IPR000585 : Hemopexin-like domain
    IPR001818 : Peptidase M10, metallopeptidase
    IPR002477 : Peptidoglycan binding-like
    IPR006026 : Peptidase, metallopeptidase
    IPR018486 : Hemopexin, conserved site
    IPR018487 : Hemopexin-like repeats
    IPR021158 : Peptidase M10A, cysteine switch, zinc binding site
    IPR021190 : Peptidase M10A
    IPR021805 : Peptidase M10A, matrix metallopeptidase, C-terminal
    IPR024079 : Metallopeptidase, catalytic domain
    IPR028697 : Matrix metalloproteinase-16
  GO :
    0004222 : Molecular Function : metalloendopeptidase activity
    0006508 : Biological Process : proteolysis
    0008237 : Molecular Function : metallopeptidase activity
    0008270 : Molecular Function : zinc ion binding
    0031012 : Cellular Component : extracellular matrix
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 20, E.R. 6.5, pero 4, E.R._golg 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007635)

HIX0007635
HIT000101810 ( D83647 )
  (Matrix metalloproteinase-16; MMP-16; EC=3.4.24.-; MMP-X2; Membrane-type matrix metalloproteinase 3; MT-MMP 3; MTMMP3; Membrane-type-3 matrix metalloproteinase; MT3-MMP; MT3MMP; Precursor;)
  genome : 89,081,461 - 89,339,435 (257,975)
  query : 1 - 1,511 (1,511/1,532)
  8 exons
  identity = 0.998
  3'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)5'
  coverage = 0.986
  EC number :
    EC 3.4.24.-
  InterPro :
    IPR000585 : Hemopexin-like domain
    IPR001818 : Peptidase M10, metallopeptidase
    IPR002477 : Peptidoglycan binding-like
    IPR006026 : Peptidase, metallopeptidase
    IPR018486 : Hemopexin, conserved site
    IPR018487 : Hemopexin-like repeats
    IPR021158 : Peptidase M10A, cysteine switch, zinc binding site
    IPR021190 : Peptidase M10A
    IPR024079 : Metallopeptidase, catalytic domain
    IPR028697 : Matrix metalloproteinase-16
  GO :
    0004222 : Molecular Function : metalloendopeptidase activity
    0006508 : Biological Process : proteolysis
    0008237 : Molecular Function : metallopeptidase activity
    0008270 : Molecular Function : zinc ion binding
    0031012 : Cellular Component : extracellular matrix
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    plas 10, extr 7, pero 6.5, mito_pero 5.33333,
    cyto_plas 5.33333, cyto_pero 4.16667
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007635)

HIX0007635
HIT000643272 ( ENST00000544227 )
  (Matrix metalloproteinase-16; MMP-16; EC=3.4.24.-; MMP-X2; Membrane-type matrix metalloproteinase 3; MT-MMP 3; MTMMP3; Membrane-type-3 matrix metalloproteinase; MT3-MMP; MT3MMP; Precursor;)
  genome : 89,081,461 - 89,339,435 (257,975)
  query : 1 - 1,512 (1,512/1,512)
  8 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)5'
  coverage = 1.000
  EC number :
    EC 3.4.24.-
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    plas 11, extr 7, pero 6, mito_pero 4.33333, E.R. 4,
    cyto_pero 3.83333
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007635)

HIX0007635
HIT000622014 ( ENST00000522726 )
  (Matrix metalloproteinase-16; MMP-16; EC=3.4.24.-; MMP-X2; Membrane-type matrix metalloproteinase 3; MT-MMP 3; MTMMP3; Membrane-type-3 matrix metalloproteinase; MT3-MMP; MT3MMP; Precursor;)
  genome : 89,180,152 - 89,340,254 (160,103)
  query : 1 - 551 (551/551)
  5 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  EC number :
    EC 3.4.24.-
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    mito 14, plas 5, cyto 3, E.R. 3, extr 2, cyto_nucl 2,
    lyso 2, golg 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007635)

HIX0007635
HIT000619903 ( ENST00000520568 )
  (Matrix metalloproteinase-16; MMP-16; EC=3.4.24.-; MMP-X2; Membrane-type matrix metalloproteinase 3; MT-MMP 3; MTMMP3; Membrane-type-3 matrix metalloproteinase; MT3-MMP; MT3MMP; Precursor;)
  genome : 89,198,554 - 89,339,485 (140,932)
  query : 1 - 605 (605/605)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  EC number :
    EC 3.4.24.-
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 12, plas 8, pero 4, cysk_plas 4, mito_pero 3.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0007635)

HIX0034530
HIT000622536 ( ENST00000523254 )
  (Conserved hypothetical protein.)
  genome : 89,339,065 - 89,554,980 (215,916)
  query : 1 - 497 (497/497)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 14, extr 12, cyto_nucl 10.5, cyto 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0034530)

HIX0034530
HIT000620750 ( ENST00000521433 )
  (Hypothetical protein.)
  genome : 89,340,073 - 89,721,769 (381,697)
  query : 1 - 579 (579/579)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 22, nucl 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0034530)

HIX0034530
HIT000620175 ( ENST00000520849 )
  (Hypothetical short protein.)
  genome : 89,340,073 - 89,341,696 (1,624)
  query : 1 - 594 (594/594)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 19, cyto 9, nucl 2, mito 2, mito_nucl 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0034530)

HIX0124696
HIT000439318 ( DQ572787 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 89,386,914 - 89,386,943 (30)
  query : 1 - 30 (30/30)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0124696)

HIX0208443
HIT000609362 ( ENST00000509499 )
  (Conserved hypothetical protein.)
  genome : 89,497,339 - 89,498,323 (985)
  query : 1 - 856 (856/856)
  2 exons
  identity = 0.998
  5'(1.000;0.989)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 13.5, cyto_nucl 9.5, cysk 8, nucl 4.5, extr 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0208443)

HIX0034530
HIT000619652 ( ENST00000520312 )
  (Conserved hypothetical protein.)
  genome : 89,554,833 - 89,721,956 (167,124)
  query : 1 - 554 (554/554)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0034530)

HIX0034530
HIT000618006 ( ENST00000518631 )
  (Conserved hypothetical protein.)
  genome : 89,554,846 - 89,721,920 (167,075)
  query : 1 - 576 (576/576)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 19, cyto 6.5, cyto_nucl 6.5, nucl 5.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0034530)

HIX0034530
HIT000621244 ( ENST00000521936 )
  (Conserved hypothetical protein.)
  genome : 89,712,520 - 89,749,363 (36,844)
  query : 1 - 1,469 (1,469/1,469)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 17, cyto_nucl 14, cyto 9, extr 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0034530)

HIX0034530
HIT000092531 ( BC032031 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 89,748,095 - 89,749,362 (1,268)
  query : 1 - 1,268 (1,268/1,319)
  1 exon
  identity = 0.999
  5'(0.999)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 22, extr 3, nucl 2, cyto 2, cyto_nucl 2, golg 2,
    cyto_golg 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0034530)

HIX0218376
HIT000112751 ( ENST00000286614 )
  (Matrix metalloproteinase-16 family protein.)
  genome : 89,044,237 - 89,339,717 (295,481)
  query : 1 - 11,558 (11,558/11,558)
  10 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 20, E.R. 6.5, pero 4, E.R._golg 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0218376)

AC100799.2
88500001-88526404 F +
NCBI

AF121898.3
88526405-88656564 F +
NCBI

AC100780.2
88656565-88755276 F -
NCBI

AC032002.7
88755277-88821135 F +
NCBI

AC005066.1
88821136-88994497 F -
NCBI

AC037450.6
88994498-89133704 F +
NCBI

AC090575.11
89133705-89180653 F -
NCBI

AC090980.5
89180654-89331818 F +
NCBI

AC090797.5
89331819-89406853 F +
NCBI

AC027259.8
89406854-89493179 F -
NCBI

AC090568.5
89493180-89605670 F +
NCBI

AC110012.5
89605671-89710815 F -
NCBI

AC090578.6
89710816-89893908 F +
NCBI

AC090146.5
89893909-90050965 F +
NCBI

AC091184.6
90050966-90100000 F +
NCBI

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )