bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0007298
HIT000656766 (
NM_001201329
)
genome : 8,993,764 - 9,009,152 (15,389)
query : 1 - 5,711 (5,711/5,722)
2 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007298)
HIX0007298
HIT000209313 (
NM_024607
)
genome : 8,993,764 - 9,008,220 (14,457)
query : 1 - 5,563 (5,563/5,574)
2 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007298)
HIX0007298
HIT000118708 (
ENST00000310455
)
genome : 8,993,765 - 9,008,206 (14,442)
query : 1 - 5,548 (5,548/5,548)
2 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007298)
HIX0007298
HIT000007341
(
AK024067
)
genome : 8,995,506 - 9,008,206 (12,701)
query : 1 - 3,807 (3,807/3,807)
2 exons
identity = 0.999
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007298)
HIX0007298
HIT000052805
(
BC043388
)
genome : 8,997,070 - 9,008,153 (11,084)
query : 1 - 2,190 (2,190/2,204)
2 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007298)
HIX0007298
HIT000020974
(
AK096119
)
genome : 8,997,073 - 9,009,084 (12,012)
query : 1 - 2,334 (2,334/2,334)
2 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007298)
HIX0007298
HIT000619049 (
ENST00000519699
)
genome : 8,997,073 - 9,009,084 (12,012)
query : 1 - 2,334 (2,334/2,334)
2 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007298)
HIX0208239
HIT000619363 (
ENST00000520017
)
genome : 8,998,934 - 9,002,945 (4,012)
query : 1 - 651 (651/651)
3 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208239)
HIX0208239
HIT000621364 (
ENST00000522057
)
genome : 8,999,032 - 9,002,933 (3,902)
query : 1 - 450 (450/450)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208239)
HIX0208202
HIT000617873 (
ENST00000518496
)
genome : 9,009,252 - 9,013,873 (4,622)
query : 1 - 636 (636/636)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208202)
HIX0208202
HIT000617207 (
ENST00000517816
)
genome : 9,009,302 - 9,025,646 (16,345)
query : 1 - 826 (826/826)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208202)
HIX0208202
HIT000621031 (
ENST00000521718
)
genome : 9,009,313 - 9,013,864 (4,552)
query : 1 - 428 (428/428)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208202)
HIX0208779
HIT000620615 (
ENST00000521298
)
genome : 9,037,761 - 9,040,029 (2,269)
query : 1 - 328 (328/328)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208779)
HIX0034511
HIT000089337
(
BC017578
)
genome : 9,046,509 - 9,060,363 (13,855)
query : 5 - 714 (710/743)
4 exons
identity = 0.996
5'(1.000;0.992;1.000;0.997)3'
coverage = 0.993
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034511)
HIX0034511
HIT000612554 (
ENST00000512942
)
genome : 9,046,521 - 9,060,364 (13,844)
query : 1 - 699 (699/699)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034511)
HIX0034511
HIT000515267 (
ENST00000417333
)
genome : 9,046,856 - 9,060,000 (13,145)
query : 1 - 408 (408/408)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034511)
HIX0034511
HIT000623019 (
ENST00000523747
)
genome : 9,047,015 - 9,060,347 (13,333)
query : 1 - 564 (564/564)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034511)
HIX0208853
HIT000621541 (
ENST00000522241
)
genome : 9,090,523 - 9,090,959 (437)
query : 1 - 437 (437/437)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208853)
HIX0007299
HIT000622122 (
ENST00000522836
)
genome : 9,106,927 - 9,112,509 (5,583)
query : 1 - 743 (743/743)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007299)
HIX0007299
HIT000622528 (
ENST00000523246
)
genome : 9,107,050 - 9,183,486 (76,437)
query : 1 - 674 (674/674)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007299)
HIX0007299
HIT000619596 (
ENST00000520255
)
genome : 9,107,114 - 9,271,224 (164,111)
query : 1 - 863 (863/863)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007299)
HIX0034531
HIT000092873
(
BC032917
)
genome : 9,112,859 - 9,117,803 (4,945)
query : 1 - 420 (420/449)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034531)
HIX0034531
HIT000617964 (
ENST00000518589
)
genome : 9,112,859 - 9,117,805 (4,947)
query : 1 - 422 (422/422)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034531)
HIX0007299
HIT000012477
(
AK055863
)
genome : 9,182,561 - 9,192,590 (10,030)
query : 1 - 3,442 (3,442/3,442)
3 exons
identity = 0.998
5'(0.994;0.995;0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007299)
HIX0007299
HIT000619729 (
ENST00000520390
)
genome : 9,182,561 - 9,192,590 (10,030)
query : 1 - 3,442 (3,442/3,442)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007299)
HIX0007299
HIT000726100 (
NR_040039
)
genome : 9,182,561 - 9,192,590 (10,030)
query : 1 - 3,442 (3,442/3,442)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007299)
HIX0007299
HIT000617994 (
ENST00000518619
)
genome : 9,183,618 - 9,225,402 (41,785)
query : 1 - 807 (807/807)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007299)
HIX0208767
HIT000620461 (
ENST00000521143
)
genome : 9,208,748 - 9,215,951 (7,204)
query : 1 - 563 (563/563)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208767)
HIX0007299
HIT000251021
(
AY203962
)
genome : 9,224,350 - 9,226,295 (1,946)
query : 2 - 1,948 (1,947/1,965)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007299)
HIX0208261
HIT000622053 (
ENST00000522765
)
genome : 9,229,480 - 9,232,475 (2,996)
query : 1 - 454 (454/454)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208261)
HIX0208261
HIT000621433 (
ENST00000522129
)
genome : 9,232,408 - 9,293,715 (61,308)
query : 1 - 545 (545/545)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208261)
HIX0208261
HIT000621153 (
ENST00000521842
)
genome : 9,237,490 - 9,273,450 (35,961)
query : 1 - 687 (687/687)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208261)
HIX0208434
HIT000607312 (
ENST00000507315
)
genome : 9,311,208 - 9,314,928 (3,721)
query : 1 - 2,035 (2,035/2,035)
4 exons
identity = 0.996
5'(1.000;1.000;0.994;0.988)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208434)
HIX0218091
HIT000090794
(
BC023578
)
genome : 9,413,442 - 9,416,333 (2,892)
query : 1 - 2,892 (2,892/2,919)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218091)
HIX0218091
HIT000621416 (
ENST00000522110
)
genome : 9,413,442 - 9,416,341 (2,900)
query : 1 - 2,900 (2,900/2,900)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218091)
HIX0218241
HIT000617046 (
ENST00000517652
)
genome : 9,423,770 - 9,424,036 (267)
query : 1 - 267 (267/267)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218241)
HIX0034248
HIT000617664 (
ENST00000518281
)
genome : 9,432,517 - 9,634,439 (201,923)
query : 1 - 3,897 (3,897/3,897)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034248)
HIX0034248
HIT000497158
(
AK302534
)
genome : 9,432,558 - 9,634,439 (201,882)
query : 1 - 3,856 (3,856/3,856)
27 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.988;1.000;
1.000;1.000;0.991;1.000;1.000;0.996)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034248)
HIX0034248
HIT000066521
(
AF082557
)
genome : 9,437,695 - 9,639,856 (202,162)
query : 1 - 8,895 (8,895/8,901)
26 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;1.000;1.000;0.994;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034248)
HIX0034248
HIT000329274
(
AB209339
)
genome : 9,437,811 - 9,636,404 (198,594)
query : 1 - 5,326 (5,326/5,326)
26 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034248)
HIX0034248
HIT000617414 (
ENST00000518027
)
genome : 9,472,800 - 9,564,518 (91,719)
query : 1 - 766 (766/766)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034248)
HIX0218158
HIT000663536_12 (
ENST00000549699
)
genome : 9,515,802 - 9,515,948 (147)
query : 1 - 147 (147/147)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218158)
HIX0218158
HIT000619722_13 (
ENST00000520383
)
genome : 9,515,805 - 9,515,948 (144)
query : 1 - 144 (144/144)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218158)
HIX0034248
HIT000620361 (
ENST00000521039
)
genome : 9,527,629 - 9,538,666 (11,038)
query : 1 - 745 (745/745)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034248)
HIX0034248
HIT000618748 (
ENST00000519392
)
genome : 9,537,264 - 9,564,518 (27,255)
query : 1 - 556 (556/556)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034248)
HIX0034248
HIT000617376 (
ENST00000517989
)
genome : 9,537,356 - 9,565,916 (28,561)
query : 1 - 603 (603/603)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034248)
HIX0034248
HIT000066522
(
AF082558
)
genome : 9,577,966 - 9,588,483 (10,518)
query : 1 - 357 (357/357)
4 exons
identity = 0.994
5'(1.000;0.981;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034248)
HIX0034248
HIT000619277 (
ENST00000519930
)
genome : 9,577,966 - 9,588,483 (10,518)
query : 1 - 357 (357/357)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034248)
HIX0034248
HIT000066523
(
AF082559
)
genome : 9,592,501 - 9,605,723 (13,223)
query : 1 - 503 (503/523)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.962
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034248)
HIX0034248
HIT000618010 (
ENST00000518635
)
genome : 9,592,501 - 9,605,723 (13,223)
query : 1 - 503 (503/503)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034248)
HIX0034248
HIT000618554 (
ENST00000519191
)
genome : 9,598,424 - 9,609,223 (10,800)
query : 1 - 496 (496/496)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034248)
HIX0125199
HIT000470892 (
ENST00000384968
)
genome : 9,599,182 - 9,599,278 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0125199)
HIX0125199
HIT000658319 (
NR_030327
)
genome : 9,599,182 - 9,599,278 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0125199)
HIX0034248
HIT000617162 (
ENST00000517770
)
genome : 9,627,641 - 9,634,546 (6,906)
query : 1 - 574 (574/574)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034248)
HIX0034248
HIT000065780
(
AF070613
)
genome : 9,638,223 - 9,639,856 (1,634)
query : 1 - 1,633 (1,633/1,654)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034248)
HIX0007300
HIT000097124
(
BC042097
)
genome : 9,757,575 - 9,758,710 (1,136)
query : 1 - 868 (868/946)
2 exons
identity = 0.999
3'(0.995;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007300)
HIX0007300
HIT000562507 (
NR_024281
)
genome : 9,757,575 - 9,760,839 (3,265)
query : 1 - 2,921 (2,921/2,942)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007300)
HIX0007300
HIT000064303
(
AF052108
)
genome : 9,757,575 - 9,759,258 (1,684)
query : 1 - 1,685 (1,685/1,706)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007300)
HIX0007300
HIT000027447
(
AL832535
)
genome : 9,757,575 - 9,759,564 (1,990)
query : 1 - 1,644 (1,644/1,657)
3 exons
identity = 0.997
3'(0.986;1.000;0.999)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007300)
HIX0007300
HIT000617069 (
ENST00000517675
)
genome : 9,757,574 - 9,760,907 (3,334)
query : 1 - 3,334 (3,334/3,334)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007300)
HIX0007300
HIT000618814 (
ENST00000519461
)
genome : 9,757,574 - 9,760,839 (3,266)
query : 1 - 2,922 (2,922/2,922)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007300)
HIX0007300
HIT000617932 (
ENST00000518557
)
genome : 9,757,574 - 9,758,710 (1,137)
query : 1 - 869 (869/869)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007300)
HIX0007300
HIT000016460
(
AK091593
)
genome : 9,757,576 - 9,760,588 (3,013)
query : 1 - 3,013 (3,013/3,013)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007300)
HIX0034456
HIT000011670
(
AK055056
)
genome : 9,757,576 - 9,759,755 (2,180)
query : 1 - 2,180 (2,180/2,180)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034456)
HIX0007300
HIT000621174 (
ENST00000521863
)
genome : 9,760,677 - 9,761,720 (1,044)
query : 1 - 545 (545/545)
3 exons
identity = 0.984
3'(1.000;0.916;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007300)
HIX0007300
HIT000471126 (
ENST00000385275
)
genome : 9,760,898 - 9,760,982 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007300)
HIX0007300
HIT000658046 (
NR_029668
)
genome : 9,760,898 - 9,760,982 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007300)
HIX0007300
HIT000620559 (
ENST00000521242
)
genome : 9,760,971 - 9,762,876 (1,906)
query : 1 - 716 (716/716)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007300)
HIX0034567
HIT000096090
(
BC040270
)
genome : 9,907,995 - 9,911,764 (3,770)
query : 1 - 3,772 (3,772/3,787)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034567)
HIX0218285
HIT000675351 (
ENST00000562143
)
genome : 9,907,995 - 9,911,764 (3,770)
query : 1 - 3,770 (3,770/3,770)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218285)
HIX0017874
HIT000121189 (
ENST00000317173
)
genome : 9,911,778 - 10,286,401 (374,624)
query : 1 - 1,536 (1,536/1,536)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000333347
(
AY958429
)
genome : 9,911,779 - 10,286,393 (374,615)
query : 1 - 1,527 (1,527/1,527)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000245493
(
AJ242973
)
genome : 9,911,826 - 10,286,252 (374,427)
query : 15 - 1,350 (1,336/1,350)
6 exons
identity = 0.996
5'(0.988;1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.990
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000054055
(
BC054033
)
genome : 9,911,830 - 10,286,398 (374,569)
query : 1 - 1,481 (1,481/1,496)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000204100 (
NM_012331
)
genome : 9,911,830 - 10,286,400 (374,571)
query : 1 - 1,483 (1,483/1,492)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000560150 (
NM_001135670
)
genome : 9,911,830 - 10,286,400 (374,571)
query : 1 - 1,363 (1,363/1,372)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000539632 (
ENST00000441698
)
genome : 9,911,880 - 10,285,875 (373,996)
query : 1 - 788 (788/788)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000242600
(
AF086925
)
genome : 9,911,962 - 10,286,395 (374,434)
query : 3 - 1,348 (1,346/1,349)
6 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000002207
(
AF183420
)
genome : 9,911,962 - 10,286,394 (374,433)
query : 2 - 1,332 (1,331/1,343)
6 exons
identity = 0.987
5'(0.957;1.000;1.000;0.971;0.991;0.995)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000617638 (
ENST00000518255
)
genome : 9,912,011 - 10,195,333 (283,323)
query : 1 - 674 (674/674)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000620526 (
ENST00000521209
)
genome : 9,916,480 - 10,108,427 (191,948)
query : 1 - 814 (814/814)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0007301
HIT000250059
(
AL049349
)
genome : 9,933,263 - 9,934,556 (1,294)
query : 1 - 1,293 (1,293/1,309)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007301)
HIX0168950
HIT000506495 (
ENST00000408393
)
genome : 9,945,431 - 9,945,541 (111)
query : 1 - 111 (111/111)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168950)
HIX0017874
HIT000622192 (
ENST00000522907
)
genome : 9,953,061 - 10,159,151 (206,091)
query : 1 - 865 (865/871)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.993
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000488112
(
AK293488
)
genome : 9,953,062 - 10,286,395 (333,334)
query : 1 - 1,706 (1,706/1,709)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000627428 (
ENST00000528246
)
genome : 9,953,062 - 10,286,395 (333,334)
query : 1 - 1,706 (1,706/1,706)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000098655
(
BC047552
)
genome : 9,953,066 - 10,286,400 (333,335)
query : 1 - 1,707 (1,707/1,722)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000560151 (
NM_001135671
)
genome : 9,953,066 - 10,286,400 (333,335)
query : 1 - 1,632 (1,632/1,641)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000656627 (
NM_001199729
)
genome : 9,953,066 - 10,286,400 (333,335)
query : 1 - 1,707 (1,707/1,716)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000333348
(
AY958430
)
genome : 9,953,066 - 10,286,399 (333,334)
query : 1 - 1,706 (1,706/1,706)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000333349
(
AY958431
)
genome : 9,953,066 - 10,286,399 (333,334)
query : 1 - 1,631 (1,631/1,631)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000494572
(
AK299948
)
genome : 9,953,237 - 10,177,873 (224,637)
query : 2 - 1,091 (1,090/1,091)
5 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;0.998)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000363768 (
ENST00000382490
)
genome : 9,953,237 - 10,286,399 (333,163)
query : 1 - 1,460 (1,460/1,460)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000622911 (
ENST00000523637
)
genome : 9,953,237 - 10,177,873 (224,637)
query : 1 - 1,092 (1,092/1,092)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000257259
(
AY690665
)
genome : 9,953,395 - 10,286,254 (332,860)
query : 1 - 1,157 (1,157/1,157)
6 exons
identity = 0.996
5'(0.981;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0017874
HIT000620999 (
ENST00000521686
)
genome : 10,159,045 - 10,211,473 (52,429)
query : 1 - 559 (559/559)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0208505
HIT000616989 (
ENST00000517594
)
genome : 10,183,978 - 10,269,075 (85,098)
query : 1 - 596 (596/596)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208505)
HIX0208458
HIT000612763 (
ENST00000513168
)
genome : 10,194,292 - 10,195,187 (896)
query : 1 - 575 (575/575)
2 exons
identity = 0.988
3'(1.000;0.967)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208458)
HIX0007302
HIT000011373
(
AK054759
)
genome : 10,217,947 - 10,219,971 (2,025)
query : 1 - 2,025 (2,025/2,025)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007302)
HIX0007304
HIT000005356
(
AK022082
)
genome : 10,274,758 - 10,276,325 (1,568)
query : 1 - 1,584 (1,584/1,584)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007304)
HIX0007305
HIT000021515
(
AK096660
)
genome : 10,281,418 - 10,284,043 (2,626)
query : 1 - 2,626 (2,626/2,626)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007305)
HIX0017874
HIT000043005
(
AK123132
)
genome : 10,284,479 - 10,286,393 (1,915)
query : 4 - 1,919 (1,916/1,919)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017874)
HIX0007303
HIT000675447 (
ENST00000562242
)
genome : 10,291,182 - 10,295,822 (4,641)
query : 1 - 4,641 (4,641/4,641)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007303)
HIX0007303
HIT000011397
(
AK054783
)
genome : 10,291,539 - 10,293,589 (2,051)
query : 1 - 2,052 (2,052/2,052)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007303)
HIX0034471
HIT000043200
(
AK123327
)
genome : 10,293,466 - 10,295,495 (2,030)
query : 1 - 2,029 (2,029/2,029)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034471)
HIX0019368
HIT000011396
(
AK054782
)
genome : 10,300,660 - 10,302,918 (2,259)
query : 1 - 2,261 (2,261/2,261)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019368)
HIX0025597
HIT000623314 (
ENST00000524047
)
genome : 10,332,075 - 10,339,484 (7,410)
query : 1 - 545 (545/545)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025597)
HIX0025597
HIT000044409
(
AK124536
)
genome : 10,332,594 - 10,336,435 (3,842)
query : 48 - 3,891 (3,844/3,891)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.988
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025597)
HIX0025597
HIT000617125 (
ENST00000517732
)
genome : 10,334,709 - 10,338,976 (4,268)
query : 1 - 562 (562/562)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025597)
HIX0208719
HIT000619830 (
ENST00000520494
)
genome : 10,335,001 - 10,336,885 (1,885)
query : 1 - 489 (489/489)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208719)
HIX0025597
HIT000617484 (
ENST00000518098
)
genome : 10,335,380 - 10,338,496 (3,117)
query : 1 - 524 (524/524)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025597)
HIX0124651
HIT000426073
(
AK307207
)
genome : 10,340,388 - 10,405,095 (64,708)
query : 1 - 1,123 (1,123/1,123)
5 exons
identity = 0.999
3'(1.000;1.000;0.996;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0124651)
HIX0124651
HIT000622308 (
ENST00000523024
)
genome : 10,340,388 - 10,405,095 (64,708)
query : 1 - 1,123 (1,123/1,123)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0124651)
HIX0124651
HIT000620467 (
ENST00000521149
)
genome : 10,340,434 - 10,375,525 (35,092)
query : 1 - 577 (577/577)
4 exons
identity = 0.986
3'(0.987;0.927;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0124651)
HIX0007306
HIT000011974
(
AK055360
)
genome : 10,344,811 - 10,346,984 (2,174)
query : 1 - 2,174 (2,174/2,174)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007306)
HIX0125002
HIT000457855
(
DQ591324
)
genome : 10,381,047 - 10,381,077 (31)
query : 1 - 31 (31/31)
1 exon
identity = 0.968
5'(0.968)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0125002)
HIX0034319
HIT000093107
(
BC033497
)
genome : 10,383,056 - 10,411,676 (28,621)
query : 1 - 1,005 (1,005/1,014)
5 exons
identity = 0.999
5'(0.995;1.000;1.000;1.000;1.000)3'
coverage = 0.991
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034319)
HIX0034319
HIT000656133 (
NM_001197020
)
genome : 10,383,056 - 10,411,676 (28,621)
query : 1 - 1,005 (1,005/1,014)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.991
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034319)
HIX0034319
HIT000621511 (
ENST00000522210
)
genome : 10,383,056 - 10,411,676 (28,621)
query : 1 - 1,005 (1,005/1,005)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034319)
HIX0034319
HIT000319348 (
NM_198464
)
genome : 10,383,056 - 10,396,333 (13,278)
query : 1 - 1,129 (1,129/1,129)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034319)
HIX0034319
HIT000125677 (
ENST00000328655
)
genome : 10,383,056 - 10,396,328 (13,273)
query : 1 - 1,124 (1,124/1,124)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034319)
HIX0034319
HIT000252911
(
AY358867
)
genome : 10,383,081 - 10,396,328 (13,248)
query : 1 - 1,099 (1,099/1,099)
5 exons
identity = 0.997
5'(0.994;1.000;1.000;0.993;0.997)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034319)
HIX0034319
HIT000261375
(
BC064412
)
genome : 10,386,922 - 10,402,708 (15,787)
query : 1 - 2,375 (2,375/2,440)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.998;0.996)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034319)
HIX0034319
HIT000618015 (
ENST00000518641
)
genome : 10,386,922 - 10,402,708 (15,787)
query : 1 - 2,374 (2,374/2,374)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034319)
HIX0028078
HIT000084904
(
AY168341
)
genome : 10,463,861 - 10,512,617 (48,757)
query : 1 - 7,977 (7,977/7,993)
4 exons
identity = 0.998
3'(0.998;1.000;0.998;0.995)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000084905
(
AY168342
)
genome : 10,463,861 - 10,512,617 (48,757)
query : 1 - 8,025 (8,025/8,041)
4 exons
identity = 0.993
3'(0.992;1.000;0.998;0.995)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000084906
(
AY168343
)
genome : 10,463,861 - 10,512,617 (48,757)
query : 1 - 8,073 (8,073/8,089)
4 exons
identity = 0.986
3'(0.985;1.000;0.998;0.995)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000084907
(
AY168344
)
genome : 10,463,861 - 10,512,617 (48,757)
query : 1 - 8,121 (8,121/8,137)
4 exons
identity = 0.981
3'(0.978;1.000;0.998;0.995)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000084908
(
AY168345
)
genome : 10,463,861 - 10,512,617 (48,757)
query : 1 - 8,169 (8,169/8,185)
4 exons
identity = 0.975
3'(0.972;1.000;0.998;0.995)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000084909
(
AY168346
)
genome : 10,463,861 - 10,512,617 (48,757)
query : 1 - 8,217 (8,217/8,233)
4 exons
identity = 0.969
3'(0.965;1.000;0.998;0.995)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000318211 (
NM_178857
)
genome : 10,463,859 - 10,512,617 (48,759)
query : 1 - 7,978 (7,978/7,978)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000363761 (
ENST00000382483
)
genome : 10,463,859 - 10,512,612 (48,754)
query : 1 - 7,973 (7,973/7,973)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000248197
(
AJ491324
)
genome : 10,463,882 - 10,512,666 (48,785)
query : 1 - 8,194 (8,194/8,194)
4 exons
identity = 0.976
3'(0.973;1.000;1.000;0.992)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000047418
(
AK127545
)
genome : 10,478,606 - 10,569,697 (91,092)
query : 1 - 1,536 (1,536/1,536)
3 exons
identity = 0.998
3'(0.996;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000126069 (
ENST00000329335
)
genome : 10,478,606 - 10,569,697 (91,092)
query : 1 - 1,536 (1,536/1,536)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0209098
HIT000659511 (
NR_036248
)
genome : 10,524,488 - 10,524,580 (93)
query : 1 - 93 (93/93)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209098)
HIX0209098
HIT000692562 (
ENST00000580651
)
genome : 10,524,488 - 10,524,580 (93)
query : 1 - 93 (93/93)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209098)
HIX0034309
pHIT000106589 ( pHIT000106589 )
genome : 10,528,863 - 10,537,550 (8,688)
query : 1 - 516 (516/516)
3 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
CAGE tag :
T08F009FE2C1
HIX0034309
HIT000389320
(
BC127692
)
genome : 10,530,138 - 10,558,032 (27,895)
query : 1 - 974 (974/974)
4 exons
identity = 0.999
5'(0.988;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000435896
(
BC150573
)
genome : 10,530,138 - 10,558,032 (27,895)
query : 1 - 974 (974/974)
4 exons
identity = 0.999
5'(0.988;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000262077
(
BC065837
)
genome : 10,530,147 - 10,558,103 (27,957)
query : 1 - 1,036 (1,036/1,080)
4 exons
identity = 0.999
5'(0.987;1.000;1.000;1.000)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000366631 (
NM_001040032
)
genome : 10,530,147 - 10,558,103 (27,957)
query : 1 - 1,036 (1,036/1,080)
4 exons
identity = 0.999
5'(0.987;1.000;1.000;1.000)3'
coverage = 0.999
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000116759 (
ENST00000304519
)
genome : 10,530,147 - 10,558,103 (27,957)
query : 1 - 1,036 (1,036/1,036)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000390905
(
BC132852
)
genome : 10,530,147 - 10,558,021 (27,875)
query : 1 - 954 (954/954)
4 exons
identity = 0.999
5'(0.987;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000390907
(
BC132854
)
genome : 10,530,147 - 10,558,021 (27,875)
query : 1 - 954 (954/954)
4 exons
identity = 0.999
5'(0.987;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000249731
(
AK131443
)
genome : 10,530,163 - 10,547,266 (17,104)
query : 1 - 1,919 (1,919/1,919)
4 exons
identity = 0.998
5'(0.984;1.000;1.000;0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000622996 (
ENST00000523723
)
genome : 10,530,163 - 10,547,266 (17,104)
query : 1 - 1,919 (1,919/1,919)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000616813 (
ENST00000517414
)
genome : 10,530,163 - 10,545,994 (15,832)
query : 1 - 455 (455/455)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000623292 (
ENST00000524025
)
genome : 10,530,163 - 10,537,509 (7,347)
query : 1 - 529 (529/529)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000095246
(
BC038534
)
genome : 10,530,171 - 10,558,100 (27,930)
query : 1 - 1,201 (1,201/1,220)
5 exons
identity = 0.999
5'(0.981;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000622571 (
ENST00000523289
)
genome : 10,530,171 - 10,558,100 (27,930)
query : 1 - 1,201 (1,201/1,201)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000621129 (
ENST00000521818
)
genome : 10,530,181 - 10,550,481 (20,301)
query : 1 - 2,338 (2,338/2,338)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000619272 (
ENST00000519925
)
genome : 10,532,156 - 10,533,348 (1,193)
query : 1 - 461 (461/461)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0218022
HIT000210178 (
NM_031439
)
genome : 10,581,278 - 10,588,022 (6,745)
query : 1 - 3,216 (3,216/3,219)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.999
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218022)
HIX0218022
HIT000116750 (
ENST00000304501
)
genome : 10,581,278 - 10,588,022 (6,745)
query : 1 - 3,216 (3,216/3,216)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218022)
HIX0218022
HIT000264754
(
BC071947
)
genome : 10,582,246 - 10,588,010 (5,765)
query : 1 - 2,236 (2,236/2,255)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218022)
HIX0218022
HIT000012170
(
AK055556
)
genome : 10,582,247 - 10,588,022 (5,776)
query : 1 - 2,247 (2,247/2,247)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218022)
HIX0218022
HIT000031850
(
BC004299
)
genome : 10,582,547 - 10,588,011 (5,465)
query : 1 - 1,936 (1,936/2,089)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.936
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218022)
HIX0218022
HIT000331354
(
AK223574
)
genome : 10,583,216 - 10,588,022 (4,807)
query : 1 - 1,278 (1,278/1,278)
2 exons
identity = 0.999
3'(1.000;0.997)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218022)
HIX0218022
HIT000099613
(
BT006693
)
genome : 10,583,248 - 10,587,943 (4,696)
query : 1 - 1,167 (1,167/1,167)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218022)
HIX0218022
HIT000247551
(
AJ409320
)
genome : 10,583,248 - 10,587,943 (4,696)
query : 1 - 1,167 (1,167/1,167)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218022)
HIX0034585
HIT000097765
(
BC043573
)
genome : 10,586,824 - 10,622,667 (35,844)
query : 1 - 1,257 (1,257/1,352)
3 exons
identity = 0.995
5'(0.994)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034585)
HIX0034585
HIT000606230 (
ENST00000506149
)
genome : 10,586,824 - 10,622,233 (35,410)
query : 1 - 821 (821/821)
3 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034585)
HIX0034585
HIT000618918 (
ENST00000519568
)
genome : 10,587,088 - 10,628,902 (41,815)
query : 1 - 251 (251/251)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034585)
HIX0218357
HIT000335948
(
BC098394
)
genome : 9,413,422 - 9,634,398 (220,977)
query : 1 - 4,164 (4,164/4,184)
27 exons
identity = 0.998
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;0.987;0.994;1.000;1.000;
0.994;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218357)
HIX0218357
HIT000118700 (
ENST00000310430
)
genome : 9,413,424 - 9,639,856 (226,433)
query : 1 - 9,620 (9,620/9,620)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218357)
HIX0218357
HIT000496655
(
AK302031
)
genome : 9,413,424 - 9,567,919 (154,496)
query : 1 - 1,964 (1,964/1,964)
11 exons
identity = 0.997
5'(0.996;1.000;1.000;1.000;0.987;1.000;1.000;
0.995;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218357)
HIX0218357
HIT000619747 (
ENST00000520408
)
genome : 9,413,424 - 9,567,919 (154,496)
query : 1 - 1,964 (1,964/1,964)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218357)
HIX0218357
HIT000200546 (
NM_003747
)
genome : 9,413,445 - 9,639,856 (226,412)
query : 1 - 9,599 (9,599/9,599)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218357)
HIX0218357
HIT000066520
(
AF082556
)
genome : 9,413,445 - 9,634,391 (220,947)
query : 1 - 4,134 (4,134/4,134)
27 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218357)
HIX0218357
HIT000496422
(
AK301798
)
genome : 9,413,524 - 9,567,838 (154,315)
query : 1 - 1,783 (1,783/1,783)
11 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218357)
HIX0218373
HIT000491348
(
AK296724
)
genome : 10,582,909 - 10,697,357 (114,449)
query : 1 - 1,753 (1,753/1,753)
6 exons
identity = 0.999
3'(0.999)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218373)
HIX0218373
HIT000666768 (
ENST00000553390
)
genome : 10,582,909 - 10,697,357 (114,449)
query : 1 - 1,753 (1,753/1,753)
6 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218373)
HIX0218373
HIT000668263 (
ENST00000554914
)
genome : 10,582,909 - 10,697,357 (114,449)
query : 1 - 1,753 (1,753/1,753)
6 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218373)
HIX0034309
pHIT000106589 ( pHIT000106589 )
genome : 10,528,863 - 10,537,550 (8,688)
query : 1 - 516 (516/516)
3 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
CAGE tag :
T08F009FE2C1
AC022784.7
9000001-9177145 F -
NCBI
AC021736.9
9177146-9245045 F -
NCBI
AC021242.10
9245046-9414330 F +
NCBI
AC103877.2
9414331-9472361 F +
NCBI
AC103834.2
9472362-9607641 F +
NCBI
AC104052.9
9607642-9650565 F -
NCBI
AC055869.13
9650566-9815411 F +
NCBI
AC034111.6
9815412-9943247 F -
NCBI
AC023385.10
9943248-10072763 F +
NCBI
AC079200.6
10072764-10143783 F -
NCBI
AC112673.7
10143784-10292843 F -
NCBI
AC104964.12
10292844-10504045 F -
NCBI
AC105001.3
10504046-10600000 F +
NCBI