bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0034795
HIT000482713 (
ENST00000399669
)
(Contactin-associated protein-like 3B precursor.)
genome : 40,491,622 - 40,633,282 (141,661)
query : 1 - 1,477 (1,477/1,477)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, lyso 4, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034795)
HIX0034795
HIT000007531
(
AK024257
)
Representative transcript
(Contactin-associated protein-like 3 family protein.)
genome : 40,498,481 - 40,633,697 (135,217)
query : 24 - 3,198 (3,175/3,198)
9 exons
identity = 0.993
3'(0.998;1.000;0.989;0.985;0.993;1.000;0.991;
1.000;0.972)5'
coverage = 0.993
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR001791 : Laminin G domain
IPR008979 : Galactose-binding domain-like
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR028873 : Contactin-associated protein-like 3
GO :
0007155 : Biological Process : cell adhesion
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 8, extr 2, mito 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034795)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK141609
Oryzias
sp. (Medaka) : ENSORLT00000005536
Tetraodon
sp. (Tetraodon) : GSTENT00015199001
Rattus
sp. (Rat) : XM_001064593
Macaca
sp. (Macaque) : XM_001114122
Danio
sp. (Zebrafish) : XM_687543
HIX0209151
eHIT000024159 ( ESTsASS_9_534 )
Representative transcript
(Non-protein coding transcript.)
genome : 40,681,427 - 40,685,913 (4,487)
query : 1 - 418 (418/418)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209151)
ESTs used for assembly :
BG209597_dup3
HIX0008058
HIT000310653 (
ENST00000356699
)
(Spermatogenesis-associated protein 31A3; Protein FAM75A3;)
genome : 40,700,291 - 40,706,537 (6,247)
query : 1 - 4,223 (4,223/4,223)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10, nucl 8.5, plas 7.5,
extr_plas 5.5, extr 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008058)
HIX0008058
HIT000398240 (
NM_001083124
)
(Spermatogenesis-associated protein 31A3; Protein FAM75A3;)
genome : 40,700,291 - 40,706,537 (6,247)
query : 1 - 4,223 (4,223/4,223)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10, nucl 8.5, plas 7.5,
extr_plas 5.5, extr 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008058)
HIX0008058
HIT000568328 (
ENST00000463536
)
(Spermatogenesis-associated protein 31A3.)
genome : 40,701,913 - 40,703,262 (1,350)
query : 1 - 770 (770/770)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 9, cyto 6.5, cyto_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008058)
HIX0008058
HIT000024269
(
AL080148
)
Representative transcript
(Spermatogenesis-associated protein 31A3.)
genome : 40,703,361 - 40,706,537 (3,177)
query : 2 - 3,178 (3,177/3,251)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008058)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : ENSBTAT00000012877
HIX0169467
HIT000447203_11
(
DQ580672
)
Representative transcript
(Non-protein coding transcript.)
genome : 40,703,812 - 40,703,842 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169467)
HIX0169212
HIT000530548 (
ENST00000432614
)
(Conserved hypothetical protein.)
genome : 40,704,468 - 40,713,709 (9,242)
query : 1 - 1,988 (1,988/1,988)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 10, nucl 5, cyto_plas 5, cyto_golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169212)
HIX0169212
HIT000514581_02 (
ENST00000416647
)
(6-pyruvoyl tetrahydropterin synthase/QueD family protein protein.)
genome : 40,712,984 - 40,713,311 (328)
query : 1 - 328 (328/328)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 11, extr 3, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169212)
HIX0169212
HIT000531758 (
ENST00000433824
)
(Conserved hypothetical protein.)
genome : 40,712,985 - 40,713,384 (400)
query : 1 - 400 (400/400)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, mito 7, extr 3, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169212)
HIX0169212
HIT000542737_03 (
ENST00000444803
)
(Hypothetical protein.)
genome : 40,713,028 - 40,713,314 (287)
query : 1 - 287 (287/287)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 7, extr 6, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169212)
HIX0035256
HIT000562985 (
NR_026801
)
(FAM74 protein family protein.)
genome : 40,715,524 - 40,722,679 (7,156)
query : 1 - 1,883 (1,883/1,883)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, nucl 7, cyto 6.5, cyto_mito 5.5, pero 5,
mito 3.5, cysk_plas 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035256)
HIX0035256
HIT000309502_05 (
ENST00000355345
)
(FAM74 protein family protein.)
genome : 40,715,849 - 40,716,325 (477)
query : 1 - 477 (477/477)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 8, cyto 5.5, nucl 5, pero 5, extr_plas 5,
cyto_mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035256)
HIX0170102
HIT000543897 (
ENST00000445963
)
(Conserved hypothetical protein.)
genome : 40,740,776 - 40,742,447 (1,672)
query : 1 - 847 (847/847)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14.5, nucl 8.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170102)
HIX0008057
HIT000259032
(
BC031626
)
Representative transcript
(Zinc finger protein 33B; Zinc finger protein 11B; Zinc finger protein KOX2;)
genome : 40,760,701 - 40,836,415 (75,715)
query : 1 - 2,261 (2,261/2,328)
7 exons
identity = 0.999
3'(0.991;1.000;0.999;0.990;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008057)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173390
Mus
sp. (Mouse) : BC083001
Equus
sp. (Horse) : XR_036262
HIX0008057
HIT000583757 (
ENST00000479710
)
(Zinc finger protein 84.)
genome : 40,760,700 - 40,789,482 (28,783)
query : 35 - 2,262 (2,228/2,262)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.985
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008057)
HIX0008057
HIT000539729 (
ENST00000441795
)
(Zinc finger protein 84.)
genome : 40,768,558 - 40,792,098 (23,541)
query : 1 - 2,149 (2,149/2,149)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008057)
HIX0008057
HIT000024482
(
AL110217
)
(Zinc finger protein 658;)
genome : 40,771,412 - 40,774,199 (2,788)
query : 2 - 2,789 (2,788/2,805)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008057)
HIX0008057
HIT000211176 (
NM_033160
)
(Zinc finger protein 658;)
genome : 40,771,402 - 40,792,112 (20,711)
query : 1 - 4,025 (4,025/4,025)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008057)
HIX0008057
HIT000714286 (
ENST00000602553
)
(Zinc finger protein 658;)
genome : 40,771,415 - 40,792,098 (20,684)
query : 1 - 4,155 (4,155/4,155)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008057)
HIX0008057
HIT000358906 (
ENST00000377626
)
(Zinc finger protein 658;)
genome : 40,771,900 - 40,792,063 (20,164)
query : 1 - 3,478 (3,478/3,478)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008057)
HIX0008057
HIT000005910
(
AK022636
)
(Zinc finger protein 658;)
genome : 40,771,900 - 40,774,277 (2,378)
query : 1 - 2,378 (2,378/2,378)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008057)
HIX0008057
HIT000007496
(
AK024222
)
(Zinc finger protein 658;)
genome : 40,771,900 - 40,774,225 (2,326)
query : 1 - 2,326 (2,326/2,326)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008057)
HIX0008057
HIT000424947
(
AK292150
)
(Zinc finger protein 658;)
genome : 40,771,901 - 40,792,098 (20,198)
query : 1 - 3,669 (3,669/3,669)
5 exons
identity = 0.998
3'(0.998;0.990;1.000;0.995;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008057)
HIX0008057
HIT000013989
(
AK057375
)
(Zinc finger protein 658;)
genome : 40,773,888 - 40,792,063 (18,176)
query : 1 - 1,490 (1,490/1,506)
5 exons
identity = 0.999
3'(0.999;0.990;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008057)
HIX0019254
HIT000005159
(
AK021885
)
Representative transcript
(Conserved hypothetical protein.)
genome : 40,782,038 - 41,593,491 (811,454)
query : 1 - 1,394 (1,394/1,394)
2 exons
identity = 0.989
5'(0.987;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 7, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019254)
HIX0169889
HIT000527682 (
ENST00000429748
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 40,812,916 - 40,813,390 (475)
query : 1 - 475 (475/475)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15.6667, cyto_plas 13.8333, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169889)
HIX0169288
HIT000552022_01 (
ENST00000454088
)
(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain containing protein.)
genome : 41,028,781 - 41,030,128 (1,348)
query : 1 - 1,348 (1,348/1,348)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 10, cyto_nucl 10, extr 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169288)
HIX0169288
HIT000537995_01 (
ENST00000440061
)
(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain containing protein.)
genome : 41,028,804 - 41,030,086 (1,283)
query : 1 - 1,283 (1,283/1,283)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 10, cyto_nucl 10, extr 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169288)
HIX0169840
HIT000524373 (
ENST00000426439
)
(3-beta hydroxysteroid dehydrogenase/isomerase domain containing protein.)
genome : 41,031,936 - 41,032,439 (504)
query : 1 - 504 (504/504)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, mito 7, extr 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169840)
HIX0169184
HIT000555420_01 (
ENST00000457486
)
(Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain containing protein.)
genome : 41,054,827 - 41,056,158 (1,332)
query : 1 - 1,332 (1,332/1,332)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169184)
HIX0169184
HIT000712703_02 (
ENST00000600961
)
(Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain containing protein.)
genome : 41,054,827 - 41,056,158 (1,332)
query : 1 - 1,332 (1,332/1,332)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169184)
HIX0169279
HIT000548202_01 (
ENST00000450268
)
(Hypothetical protein.)
genome : 41,142,691 - 41,217,717 (75,027)
query : 1 - 527 (527/527)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, pero 4, nucl 2, extr_plas 2, plas 1.5,
extr 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169279)
HIX0218635
HIT000528106_01 (
ENST00000430172
)
(Hypothetical protein.)
genome : 41,142,691 - 41,217,717 (75,027)
query : 1 - 463 (463/463)
4 exons
identity = 0.989
3'(1.000;0.972;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 14.5, mito_pero 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218635)
HIX0169620
HIT000509710 (
ENST00000411776
)
(Hypothetical short protein.)
genome : 41,277,733 - 41,298,538 (20,806)
query : 1 - 476 (476/476)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 8, nucl 7.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169620)
HIX0170183
HIT000548713 (
ENST00000450779
)
(Conserved hypothetical protein.)
genome : 41,285,357 - 41,287,306 (1,950)
query : 1 - 1,126 (1,126/1,126)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14.5, nucl 8.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170183)
HIX0169265
HIT000657686 (
NR_027461
)
(FAM74 protein family protein.)
genome : 41,305,112 - 41,312,131 (7,020)
query : 1 - 1,790 (1,790/1,790)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7.5, pero 7, cyto_mito 7, mito 5.5, plas 4.5,
extr_plas 4, extr 2.5, nucl 2, golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169265)
HIX0169265
HIT000524940 (
ENST00000427006
)
(FAM74 protein family protein.)
genome : 41,305,112 - 41,311,993 (6,882)
query : 1 - 1,652 (1,652/1,652)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7.5, pero 7, cyto_mito 7, mito 5.5, plas 4.5,
extr_plas 4, extr 2.5, nucl 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169265)
HIX0169265
HIT000712817 (
ENST00000601076
)
(FAM74 protein family protein.)
genome : 41,311,426 - 41,311,806 (381)
query : 1 - 381 (381/381)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 7, cyto 6.5, cyto_mito 6, plas 5.5, mito 4.5,
extr_plas 4.5, nucl 3, extr 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169265)
HIX0169213
HIT000538817 (
ENST00000440883
)
(Conserved hypothetical protein.)
genome : 41,313,945 - 41,323,179 (9,235)
query : 1 - 1,988 (1,988/1,988)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 10, nucl 5, cyto_plas 5, cyto_golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169213)
HIX0169213
HIT000530196_01 (
ENST00000432262
)
(Hypothetical protein.)
genome : 41,314,270 - 41,314,669 (400)
query : 1 - 400 (400/400)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, mito 7, extr 3, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169213)
HIX0169213
HIT000542737_04 (
ENST00000444803
)
(Hypothetical protein.)
genome : 41,314,340 - 41,314,626 (287)
query : 1 - 287 (287/287)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 7, extr 6, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169213)
HIX0169213
HIT000514581_03 (
ENST00000416647
)
(6-pyruvoyl tetrahydropterin synthase/QueD family protein protein.)
genome : 41,314,343 - 41,314,670 (328)
query : 1 - 328 (328/328)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 11, extr 3, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169213)
HIX0169120
HIT000657629 (
NM_001242613
)
(Domain of unknown function DUF4599 domain containing protein.)
genome : 41,321,107 - 41,327,397 (6,291)
query : 1 - 4,259 (4,259/4,259)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 9.5, cyto_nucl 9.5, cyto 8.5, pero 5, plas 4.5,
extr_plas 3.5, extr 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169120)
HIX0169120
HIT000358789 (
ENST00000377509
)
(Domain of unknown function DUF4599 domain containing protein.)
genome : 41,321,107 - 41,327,364 (6,258)
query : 1 - 4,226 (4,226/4,226)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10, nucl 8.5, plas 7.5,
extr_plas 5.5, extr 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169120)
HIX0169120
HIT000527701 (
ENST00000429767
)
(Domain of unknown function DUF4599 domain containing protein.)
genome : 41,321,107 - 41,327,364 (6,258)
query : 1 - 4,226 (4,226/4,226)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10, nucl 8.5, plas 7.5,
extr_plas 5.5, extr 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169120)
HIX0169468
HIT000447203_12
(
DQ580672
)
Representative transcript
(Non-protein coding transcript.)
genome : 41,323,805 - 41,323,835 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169468)
HIX0209162
eHIT000024623 ( ESTsASS_9_998 )
Representative transcript
(Non-protein coding transcript.)
genome : 41,341,736 - 41,346,224 (4,489)
query : 1 - 331 (331/331)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209162)
ESTs used for assembly :
BG203740_dup2
HIX0169972
HIT000533748 (
ENST00000435814
)
(Conserved hypothetical protein.)
genome : 41,475,787 - 41,476,094 (308)
query : 1 - 308 (308/308)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.33333, cyto 8.5, nucl 6,
cyto_pero 5.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169972)
HIX0035273
HIT000358901 (
ENST00000377621
)
(Domain of unknown function DUF4599 domain containing protein.)
genome : 41,500,679 - 41,506,925 (6,247)
query : 1 - 4,226 (4,226/4,226)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10, nucl 8.5, plas 7.5,
extr_plas 5.5, extr 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035273)
HIX0035273
HIT000485926 (
NM_001113541
)
(Domain of unknown function DUF4599 domain containing protein.)
genome : 41,500,679 - 41,506,925 (6,247)
query : 1 - 4,226 (4,226/4,226)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10, nucl 8.5, plas 7.5,
extr_plas 5.5, extr 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035273)
HIX0035273
HIT000569521 (
ENST00000464795
)
(Domain of unknown function DUF4599 domain containing protein.)
genome : 41,502,298 - 41,503,646 (1,349)
query : 1 - 769 (769/769)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 9, cyto 6.5, cyto_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035273)
HIX0169469
HIT000447203_13
(
DQ580672
)
Representative transcript
(Non-protein coding transcript.)
genome : 41,504,197 - 41,504,227 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169469)
HIX0035044
HIT000089792
(
BC018886
)
Representative transcript
(Spermatogenesis-associated protein 31A7.)
genome : 41,504,854 - 41,514,094 (9,241)
query : 1 - 1,987 (1,987/2,029)
2 exons
identity = 0.999
3'(1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 10, nucl 5, cyto_plas 5, cyto_golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035044)
HIX0035044
HIT000527721 (
ENST00000429787
)
(Spermatogenesis-associated protein 31A7.)
genome : 41,504,853 - 41,514,094 (9,242)
query : 1 - 1,988 (1,988/1,988)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 10, nucl 5, cyto_plas 5, cyto_golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035044)
HIX0035044
HIT000514581_04 (
ENST00000416647
)
(6-pyruvoyl tetrahydrobiopterin synthase; PTP synthase; PTPS; EC=4.2.3.12;)
genome : 41,513,369 - 41,513,696 (328)
query : 1 - 328 (328/328)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 4.2.3.12
KEGG pathway :
00790 : Folate biosynthesis (15)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 11, extr 3, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035044)
HIX0035044
HIT000542737_02 (
ENST00000444803
)
(6-pyruvoyl tetrahydrobiopterin synthase; PTP synthase; PTPS; EC=4.2.3.12;)
genome : 41,513,413 - 41,513,699 (287)
query : 1 - 287 (287/287)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 4.2.3.12
KEGG pathway :
00790 : Folate biosynthesis (15)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 7, extr 6, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035044)
HIX0169129
HIT000517924 (
ENST00000419990
)
(FAM74 protein family protein.)
genome : 41,516,046 - 41,523,018 (6,973)
query : 1 - 1,718 (1,718/1,718)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 12, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169129)
HIX0169129
HIT000388406_03
(
BC121813
)
Representative transcript
(FAM74 protein family protein.)
genome : 41,516,054 - 41,521,999 (5,946)
query : 1 - 775 (775/775)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR027832 : FAM74 protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 12, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169129)
HIX0169129
HIT000516537_01 (
ENST00000418603
)
(FAM74 protein family protein.)
genome : 41,516,054 - 41,521,999 (5,946)
query : 1 - 775 (775/775)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 12, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169129)
HIX0169129
HIT000637758_01 (
ENST00000538713
)
(FAM74 protein family protein.)
genome : 41,516,054 - 41,521,999 (5,946)
query : 1 - 775 (775/775)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 12, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169129)
HIX0169198
HIT000512947_03 (
ENST00000415013
)
(Hypothetical short protein.)
genome : 41,529,583 - 41,550,381 (20,799)
query : 1 - 476 (476/476)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169198)
HIX0169198
HIT000525261_03 (
ENST00000427327
)
(Hypothetical short protein.)
genome : 41,529,583 - 41,550,381 (20,799)
query : 1 - 476 (476/476)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169198)
HIX0058615
HIT000358898_02 (
ENST00000377618
)
(Zinc finger protein 658;)
genome : 41,588,823 - 41,609,544 (20,722)
query : 1 - 4,037 (4,037/4,037)
5 exons
identity = 1.000
3'(1.000;1.000;0.992;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058615)
HIX0058615
HIT000556676_02 (
ENST00000458742
)
(Zinc finger protein 658;)
genome : 41,588,823 - 41,609,544 (20,722)
query : 1 - 4,037 (4,037/4,037)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058615)
HIX0058615
HIT000563663_02 (
NR_027861
)
(Zinc finger protein 658;)
genome : 41,588,838 - 41,592,207 (3,370)
query : 1 - 3,370 (3,370/3,384)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058615)
HIX0058615
HIT000398623_03 (
NR_003528
)
(Zinc finger protein 729.)
genome : 41,588,833 - 41,609,544 (20,712)
query : 1 - 4,028 (4,028/4,028)
5 exons
identity = 1.000
3'(1.000;1.000;0.992;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058615)
HIX0058615
HIT000714561_02 (
ENST00000602828
)
(Zinc finger protein 658;)
genome : 41,588,836 - 41,592,207 (3,372)
query : 1 - 3,372 (3,372/3,372)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058615)
HIX0058615
HIT000020549_04
(
AK095694
)
Representative transcript
(Zinc finger protein 658;)
genome : 41,589,321 - 41,592,207 (2,887)
query : 1 - 2,887 (2,887/2,887)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058615)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173390
Pongo
sp. (Orangutan) : ENSPPYT00000022207
Pan
sp. (Chimpanzee) : XM_001141679
HIX0058615
HIT000501057_02
(
BC137089
)
(Zinc finger protein 729.)
genome : 41,589,366 - 41,592,207 (2,842)
query : 1 - 2,842 (2,842/2,842)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058615)
HIX0058615
HIT000109974_04 (
ENST00000266116
)
(Zinc finger protein 729.)
genome : 41,589,516 - 41,602,032 (12,517)
query : 8 - 3,193 (3,186/3,193)
3 exons
identity = 0.999
3'(1.000;1.000;0.978)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058615)
HIX0058615
HIT000519410 (
ENST00000421476
)
(Zinc finger protein 658;)
genome : 41,591,299 - 41,602,024 (10,726)
query : 1 - 1,395 (1,395/1,395)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14, extr 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058615)
HIX0169258
HIT000521568_02 (
ENST00000423634
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 41,630,397 - 41,630,883 (487)
query : 1 - 487 (487/487)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15.6667, cyto_plas 13.8333, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169258)
HIX0169258
HIT000527214_02 (
ENST00000429280
)
(S-phase kinase-associated protein 1-like family protein.)
genome : 41,630,397 - 41,630,883 (487)
query : 1 - 487 (487/487)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15.6667, cyto_plas 13.8333, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169258)
HIX0218707
HIT000710672 (
ENST00000598909
)
(Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain containing protein.)
genome : 41,776,064 - 41,777,434 (1,371)
query : 1 - 1,371 (1,371/1,371)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11, cyto 7.5, mito 6, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218707)
HIX0170187
HIT000548871_01 (
ENST00000450937
)
(3-beta hydroxysteroid dehydrogenase/isomerase domain containing protein.)
genome : 41,796,924 - 41,797,395 (472)
query : 1 - 472 (472/472)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, mito 7, extr 3, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170187)
HIX0169791
HIT000521603_01 (
ENST00000423669
)
(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal domain containing protein.)
genome : 41,799,259 - 41,800,556 (1,298)
query : 1 - 1,298 (1,298/1,298)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3.5, cyto_nucl 3.33333, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169791)
HIX0218627
HIT000509451_04 (
ENST00000411517
)
(Hypothetical protein.)
genome : 41,879,688 - 41,880,646 (959)
query : 1 - 641 (641/641)
2 exons
identity = 0.986
5'(1.000;0.973)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218627)
HIX0189427
HIT000547367_01 (
ENST00000449433
)
(Beta-trefoil DNA-binding domain containing protein.)
genome : 41,884,765 - 41,886,211 (1,447)
query : 1 - 1,447 (1,447/1,447)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10.5, mito 8, cyto_nucl 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0189427)
HIX0169382
HIT000393277_03
(
DQ786224
)
Representative transcript
(Hypothetical short protein.)
genome : 41,921,492 - 41,922,057 (566)
query : 16 - 578 (563/597)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 0.967
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27.5, extr_plas 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169382)
HIX0125785
HIT000439332
(
DQ572801
)
Representative transcript
(Non-protein coding transcript.)
genome : 41,937,070 - 41,937,099 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0125785)
HIX0008056
HIT000089989
(
BC019880
)
(Conserved hypothetical protein.)
genome : 41,948,515 - 41,954,688 (6,174)
query : 1 - 548 (548/575)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 7, nucl 1, cyto 1, cyto_nucl 1, lyso 1,
golg 1, cyto_golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008056)
HIX0008056
HIT000096040
(
BC040170
)
(Conserved hypothetical protein.)
genome : 41,952,398 - 41,955,010 (2,613)
query : 1 - 2,613 (2,613/2,643)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5.5, cyto_nucl 5.16667,
cyto_pero 4.33333, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008056)
HIX0008056
HIT000037024
(
BC015151
)
(Conserved hypothetical protein.)
genome : 41,952,398 - 41,955,032 (2,635)
query : 1 - 2,520 (2,520/2,539)
2 exons
identity = 0.995
3'(0.996;0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008056)
HIX0008056
HIT000017172_03
(
AK092305
)
(Hypothetical protein.)
genome : 41,952,399 - 41,955,076 (2,678)
query : 1 - 2,581 (2,581/2,581)
2 exons
identity = 0.995
3'(0.995;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.1667, extr 7, cyto 6.5,
cyto_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008056)
HIX0008056
HIT000486524_03 (
NR_015363
)
(Hypothetical protein.)
genome : 41,952,399 - 41,955,076 (2,678)
query : 1 - 2,581 (2,581/2,581)
2 exons
identity = 0.995
3'(0.995;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.1667, extr 7, cyto 6.5,
cyto_pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008056)
HIX0008056
HIT000085911_03
(
BC000869
)
Representative transcript
(Hypothetical protein.)
genome : 41,952,714 - 41,955,031 (2,318)
query : 1 - 1,478 (1,478/1,496)
3 exons
identity = 0.995
3'(0.996;0.992;0.989)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008056)
HIX0008056
HIT000020545
(
AK095690
)
(Conserved hypothetical protein.)
genome : 41,952,715 - 41,955,077 (2,363)
query : 2 - 2,249 (2,248/2,249)
2 exons
identity = 0.996
3'(0.996;0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12.3333, extr 9, mito_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008056)
HIX0008056
HIT000040257
(
BC027338
)
(Conserved hypothetical protein.)
genome : 41,953,759 - 41,955,081 (1,323)
query : 1 - 1,208 (1,208/1,222)
2 exons
identity = 0.995
3'(0.995;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008056)
HIX0170068
HIT000541492 (
ENST00000443558
)
(Conserved hypothetical protein.)
genome : 41,954,580 - 41,955,037 (458)
query : 1 - 458 (458/458)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 18, cyto 6, nucl 4, mito 3, cyto_pero 3,
cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170068)
HIX0035058
HIT000486370 (
NR_003670
)
(Putative keratinocyte growth factor-like protein 2; KGF-like protein 2;)
genome : 41,958,802 - 42,019,584 (60,783)
query : 1 - 4,707 (4,707/4,723)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
HIX0035058
HIT000331692
(
AY098594
)
Representative transcript
(Fibroblast growth factor 7; FGF-7; Heparin-binding growth factor 7; HBGF-7; Keratinocyte growth factor; Precursor;)
genome : 41,959,736 - 42,019,477 (59,742)
query : 1 - 3,665 (3,665/3,665)
3 exons
identity = 0.995
3'(0.997;1.000;0.987)5'
coverage = 1.000
InterPro :
IPR002209 : Fibroblast growth factor family
IPR008996 : Cytokine, IL-1-like
IPR028142 : IL-1 family/FGF family
IPR028247 : Fibroblast growth factor 7
GO :
0005102 : Molecular Function : receptor binding
0005104 : Molecular Function : fibroblast growth factor receptor binding
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
0008543 : Biological Process : fibroblast growth factor receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, mito 12, cyto_nucl 9.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : ENSORLT00000002930
HIX0035058
HIT000092108
(
BC030269
)
(Putative keratinocyte growth factor-like protein 2; KGF-like protein 2;)
genome : 41,961,616 - 42,019,477 (57,862)
query : 1 - 1,785 (1,785/1,867)
3 exons
identity = 0.994
3'(0.996;1.000;0.989)5'
coverage = 1.000
InterPro :
IPR002209 : Fibroblast growth factor family
IPR008996 : Cytokine, IL-1-like
IPR028142 : IL-1 family/FGF family
IPR028247 : Fibroblast growth factor 7
GO :
0005102 : Molecular Function : receptor binding
0005104 : Molecular Function : fibroblast growth factor receptor binding
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
0008543 : Biological Process : fibroblast growth factor receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10.5, mito 10, nucl 5.5,
mito_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
HIX0035058
HIT000334145
(
BC067893
)
(Putative keratinocyte growth factor-like protein 2; KGF-like protein 2;)
genome : 41,961,561 - 42,019,218 (57,658)
query : 1 - 1,580 (1,580/1,595)
3 exons
identity = 0.996
3'(0.997;1.000;0.993)5'
coverage = 0.999
InterPro :
IPR002209 : Fibroblast growth factor family
IPR008996 : Cytokine, IL-1-like
IPR028142 : IL-1 family/FGF family
IPR028247 : Fibroblast growth factor 7
GO :
0005102 : Molecular Function : receptor binding
0005104 : Molecular Function : fibroblast growth factor receptor binding
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
0008543 : Biological Process : fibroblast growth factor receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, mito 12, cyto_nucl 9.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
HIX0035058
HIT000552579 (
ENST00000454645
)
(Putative keratinocyte growth factor-like protein 2; KGF-like protein 2;)
genome : 41,961,615 - 42,019,580 (57,966)
query : 1 - 1,890 (1,890/1,890)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
HIX0035058
HIT000502134
(
BC143690
)
(Conserved hypothetical protein.)
genome : 41,963,886 - 42,019,486 (55,601)
query : 1 - 647 (647/647)
3 exons
identity = 0.989
3'(1.000;1.000;0.987)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, plas 10, E.R. 5, extr_plas 5, cysk_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
HIX0169268
HIT000525470_01 (
ENST00000427536
)
(Hypothetical protein.)
genome : 42,000,060 - 42,000,368 (309)
query : 1 - 309 (309/309)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11.3333, cyto 10, nucl 7.5,
cyto_pero 6.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169268)
HIX0218722
HIT000726532_01 (
NR_046203
)
(Hypothetical short protein.)
genome : 42,004,536 - 42,008,563 (4,028)
query : 1 - 523 (523/547)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218722)
HIX0035058
HIT000423020_03
(
AK290223
)
(Hypothetical protein.)
genome : 42,018,871 - 42,019,492 (622)
query : 1 - 622 (622/622)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 16, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
HIX0035058
HIT000528236_01 (
ENST00000430302
)
(Hypothetical protein.)
genome : 42,018,905 - 42,020,409 (1,505)
query : 1 - 781 (781/781)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 16, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
HIX0169107
HIT000425439_03
(
AK292642
)
(Hypothetical protein.)
genome : 42,018,944 - 42,019,683 (740)
query : 1 - 625 (625/625)
2 exons
identity = 0.995
5'(0.993;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169107)
HIX0169107
HIT000358798_03 (
ENST00000377518
)
(Hypothetical protein.)
genome : 42,018,958 - 42,021,594 (2,637)
query : 1 - 2,522 (2,522/2,541)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169107)
HIX0169107
HIT000527752_01 (
ENST00000429818
)
(Hypothetical protein.)
genome : 42,018,961 - 42,021,279 (2,319)
query : 1 - 1,480 (1,480/1,480)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169107)
HIX0169107
HIT000266078_03
(
BC084570
)
Representative transcript
(Hypothetical protein.)
genome : 42,018,961 - 42,020,413 (1,453)
query : 1 - 1,338 (1,338/1,367)
2 exons
identity = 0.996
5'(0.993;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169107)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000038794
HIX0035058
HIT000510565_01 (
ENST00000412631
)
(Hypothetical short protein.)
genome : 42,019,615 - 42,020,413 (799)
query : 1 - 256 (256/256)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 17, extr 6, mito 4, E.R._mito 3.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
HIX0209129
HIT000615721_02 (
ENST00000516318
)
(Non-protein coding transcript.)
genome : 42,037,464 - 42,037,558 (95)
query : 1 - 95 (95/95)
1 exon
identity = 0.968
5'(0.968)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209129)
HIX0209129
HIT000615727_02 (
ENST00000516324
)
(Non-protein coding transcript.)
genome : 42,037,464 - 42,037,558 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209129)
HIX0209129
HIT000615793_01 (
ENST00000516390
)
(Non-protein coding transcript.)
genome : 42,037,464 - 42,037,558 (95)
query : 1 - 95 (95/95)
1 exon
identity = 0.968
5'(0.968)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209129)
HIX0209129
HIT000616318_02 (
ENST00000516915
)
(Non-protein coding transcript.)
genome : 42,037,464 - 42,037,558 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209129)
HIX0209129
HIT000616472_02 (
ENST00000517069
)
(Non-protein coding transcript.)
genome : 42,037,464 - 42,037,558 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209129)
HIX0169178
HIT000512852_01 (
ENST00000414918
)
(Hypothetical protein.)
genome : 42,037,567 - 42,037,912 (346)
query : 1 - 346 (346/346)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 4, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169178)
HIX0169178
HIT000534271_01 (
ENST00000436337
)
(Hypothetical protein.)
genome : 42,037,568 - 42,037,913 (346)
query : 1 - 346 (346/346)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 4, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169178)
HIX0169178
HIT000546760_01 (
ENST00000448826
)
(Hypothetical protein.)
genome : 42,037,568 - 42,037,913 (346)
query : 1 - 346 (346/346)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 4, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169178)
HIX0169178
HIT000544330_01 (
ENST00000446396
)
(Hypothetical protein.)
genome : 42,037,609 - 42,037,915 (307)
query : 1 - 307 (307/307)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 4, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169178)
HIX0169178
HIT000510362_01 (
ENST00000412428
)
(Hypothetical protein.)
genome : 42,037,617 - 42,037,914 (298)
query : 1 - 298 (298/298)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 4, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169178)
HIX0169081
HIT000018591_03
(
AK093724
)
Representative transcript
(Hypothetical protein.)
genome : 42,043,162 - 42,045,804 (2,643)
query : 1 - 2,644 (2,644/2,644)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169081)
HIX0169081
HIT000607898_03 (
ENST00000507933
)
(Hypothetical short protein.)
genome : 42,044,205 - 42,045,593 (1,389)
query : 2 - 491 (490/491)
2 exons
identity = 0.976
5'(0.979;0.960)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 8, nucl 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169081)
HIX0169081
HIT000546425_01 (
ENST00000448491
)
(Hypothetical short protein.)
genome : 42,044,205 - 42,045,598 (1,394)
query : 1 - 495 (495/495)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7, cyto_nucl 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169081)
HIX0169081
HIT000613735_03 (
ENST00000514222
)
(Hypothetical short protein.)
genome : 42,044,449 - 42,045,937 (1,489)
query : 1 - 680 (680/680)
3 exons
identity = 0.966
5'(0.979;0.956;0.964)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169081)
HIX0169081
HIT000536006_01 (
ENST00000438072
)
(Hypothetical short protein.)
genome : 42,044,449 - 42,045,800 (1,352)
query : 1 - 543 (543/543)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169081)
HIX0209151
eHIT000024159 ( ESTsASS_9_534 )
Representative transcript
(Non-protein coding transcript.)
genome : 40,681,427 - 40,685,913 (4,487)
query : 1 - 418 (418/418)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209151)
ESTs used for assembly :
BG209597_dup3
HIX0209162
eHIT000024623 ( ESTsASS_9_998 )
Representative transcript
(Non-protein coding transcript.)
genome : 41,341,736 - 41,346,224 (4,489)
query : 1 - 331 (331/331)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209162)
ESTs used for assembly :
BG203740_dup2
AL162233.14
40500001-40655667 F -
NCBI
AL353770.18
40655668-40772228 F -
NCBI
BX664608.6
40772229-40940341 F -
NCBI
50000
40940342-40990341 N
BX248112.4
40990342-41065387 F -
NCBI
AL953911.4
41065388-41143214 F -
NCBI
50000
41143215-41193214 N
AL596385.12
41193215-41365793 F +
NCBI
50000
41365794-41415793 N
AL590491.13
41415794-41590159 F +
NCBI
AL954139.7
41590160-41658839 F +
NCBI
BX005209.7
41658840-41722739 F +
NCBI
BX296545.5
41722740-41853122 F +
NCBI
BX664615.10
41853123-42000707 F +
NCBI
CR769767.5
42000708-42100000 F +
NCBI