bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0017088
HIT000560458 (
NM_001139498
)
(Fibroblast growth factor 13 isoform 4.)
genome : 137,713,735 - 138,287,185 (573,451)
query : 1 - 2,143 (2,143/2,172)
6 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, extr 5, mito 5, nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017088)
HIX0017088
HIT000560460 (
NM_001139500
)
(Fibroblast growth factor 13; FGF-13; Fibroblast growth factor homologous factor 2; FHF-2;)
genome : 137,713,735 - 138,287,185 (573,451)
query : 1 - 2,311 (2,311/2,340)
7 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, cyto_nucl 17, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017088)
HIX0017088
HIT000560461 (
NM_001139501
)
(Fibroblast growth factor 13; FGF-13; Fibroblast growth factor homologous factor 2; FHF-2;)
genome : 137,713,735 - 138,287,185 (573,451)
query : 1 - 2,421 (2,421/2,450)
8 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 12, nucl 10, mito 4, golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017088)
HIX0017088
HIT000499783
(
AK316170
)
(Fibroblast growth factor 13; FGF-13; Fibroblast growth factor homologous factor 2; FHF-2;)
genome : 137,714,776 - 138,286,445 (571,670)
query : 1 - 1,179 (1,179/1,179)
6 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR002209 : Fibroblast growth factor family
IPR008996 : Cytokine, IL-1-like
IPR028142 : IL-1 family/FGF family
GO :
0005102 : Molecular Function : receptor binding
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, cyto_nucl 17, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017088)
HIX0017088
HIT000498309
(
AK303685
)
(Fibroblast growth factor 13 isoform 4.)
genome : 137,714,839 - 138,287,185 (572,347)
query : 1 - 1,039 (1,039/1,039)
6 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002209 : Fibroblast growth factor family
IPR008996 : Cytokine, IL-1-like
IPR028142 : IL-1 family/FGF family
IPR028279 : Fibroblast growth factor 13
GO :
0005102 : Molecular Function : receptor binding
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, extr 5, mito 5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017088)
HIX0017088
HIT000492169
(
AK297545
)
Representative transcript
(Fibroblast growth factor 13; FGF-13; Fibroblast growth factor homologous factor 2; FHF-2;)
genome : 137,714,864 - 138,287,216 (572,353)
query : 1 - 1,213 (1,213/1,213)
7 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002209 : Fibroblast growth factor family
IPR008996 : Cytokine, IL-1-like
IPR028142 : IL-1 family/FGF family
GO :
0005102 : Molecular Function : receptor binding
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, cyto_nucl 17, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017088)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171355
Gallus
sp. (Chicken) : AF199610
Rattus
sp. (Rat) : AF271786
Mus
sp. (Mouse) : AK141848
Danio
sp. (Zebrafish) : BC085439
Bos
sp. (Cow) : BC149415
Pongo
sp. (Orangutan) : CR860942
Oryzias
sp. (Medaka) : ENSORLT00000002034
Pan
sp. (Chimpanzee) : ENSPTRT00000054873
Tetraodon
sp. (Tetraodon) : GSTENT00031254001
Takifugu
sp. (Fugu) : SINFRUT00000161181
Monodelphis
sp. (Opossum) : XM_001366208
Equus
sp. (Horse) : XM_001915813
Canis
sp. (Dog) : XM_549294
HIX0017088
HIT000351883 (
ENST00000370603
)
(Fibroblast growth factor 13; FGF-13; Fibroblast growth factor homologous factor 2; FHF-2;)
genome : 137,715,011 - 138,286,269 (571,259)
query : 1 - 768 (768/768)
6 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, cyto_nucl 17, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017088)
HIX0017088
HIT000640514 (
ENST00000541469
)
(Fibroblast growth factor 13 isoform 4.)
genome : 137,715,011 - 138,286,269 (571,259)
query : 1 - 600 (600/600)
5 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, extr 5, mito 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017088)
HIX0017088
HIT000534132 (
ENST00000436198
)
(Fibroblast growth factor 13; FGF-13; Fibroblast growth factor homologous factor 2; FHF-2;)
genome : 137,715,116 - 138,287,168 (572,053)
query : 1 - 913 (913/913)
7 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017088)
HIX0017088
HIT000553597 (
ENST00000455663
)
(Fibroblast growth factor 13; FGF-13; Fibroblast growth factor homologous factor 2; FHF-2;)
genome : 137,717,647 - 138,072,729 (355,083)
query : 1 - 687 (687/687)
6 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017088)
HIX0017088
HIT000546607 (
ENST00000448673
)
(Fibroblast growth factor 13 isoform 2.)
genome : 137,791,014 - 138,304,939 (513,926)
query : 1 - 652 (652/652)
4 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, mito 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017088)
HIX0017088
HIT000069588
(
AF108756
)
(Fibroblast growth factor 13 isoform 2.)
genome : 137,939,674 - 138,286,435 (346,762)
query : 1 - 383 (383/383)
2 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017088)
HIX0017088
HIT000073725
(
AF199612
)
(Fibroblast growth factor 13 isoform 2.)
genome : 137,939,674 - 138,285,687 (346,014)
query : 3 - 354 (352/354)
3 exons
identity = 1.000
3'(1.000)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017088)
HIX0017088
HIT000519394 (
ENST00000421460
)
(Fibroblast growth factor 13 isoform 2.)
genome : 137,939,674 - 138,285,687 (346,014)
query : 1 - 352 (352/352)
3 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017088)
HIX0056495
HIT000100592
(
D16472
)
Representative transcript
(Hypothetical short protein.)
genome : 138,002,323 - 138,005,938 (3,616)
query : 1 - 3,616 (3,616/3,616)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056495)
HIX0017088
HIT000073726
(
AF199613
)
(Non-protein coding transcript.)
genome : 138,286,221 - 138,287,152 (932)
query : 2 - 284 (283/284)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017088)
HIX0056517
HIT000118292 (
ENST00000309296
)
(SNURFRPN4 family protein.)
genome : 138,444,199 - 138,444,541 (343)
query : 1 - 343 (343/343)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 5.5, cyto_nucl 5.5, nucl 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056517)
HIX0213597
HIT000657884 (
NR_028597
)
(3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein.)
genome : 138,528,978 - 138,531,132 (2,155)
query : 1 - 2,155 (2,155/2,155)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 9.5, mito 6.5, extr 4,
E.R._mito 4, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213597)
HIX0213597
HIT000540231 (
ENST00000442297
)
(3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein.)
genome : 138,529,050 - 138,529,835 (786)
query : 1 - 786 (786/786)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 9.5, mito 6.5, extr 4,
E.R._mito 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213597)
HIX0056112
HIT000197182 (
NM_000133
)
(Coagulation factor IX; EC=3.4.21.22; Christmas factor; Plasma thromboplastin component; PTC; Contains: Coagulation factor IXa light chain; Contains: Coagulation factor IXa heavy chain; Precursor;)
genome : 138,612,895 - 138,645,617 (32,723)
query : 1 - 2,802 (2,802/2,802)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.22
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056112)
HIX0056112
HIT000339323
(
BC109214
)
Representative transcript
(Coagulation factor IX; EC=3.4.21.22; Christmas factor; Plasma thromboplastin component; PTC; Contains: Coagulation factor IXa light chain; Contains: Coagulation factor IXa heavy chain; Precursor;)
genome : 138,612,895 - 138,645,187 (32,293)
query : 1 - 2,156 (2,156/2,156)
9 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.916)3'
coverage = 1.000
EC number :
EC 3.4.21.22
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000294 : Gamma-carboxyglutamic acid-rich (GLA) domain
IPR000742 : Epidermal growth factor-like domain
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR001881 : EGF-like calcium-binding domain
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR013032 : EGF-like, conserved site
IPR017857 : Coagulation factor, subgroup, Gla domain
IPR018097 : EGF-like calcium-binding, conserved site
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056112)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AF465269
Takifugu
sp. (Fugu) : AF465274
Takifugu
sp. (Fugu) : AF465277
Mus
sp. (Mouse) : AK149372
Danio
sp. (Zebrafish) : BC115275
Bos
sp. (Cow) : BC149563
Tetraodon
sp. (Tetraodon) : CR731118
Equus
sp. (Horse) : ENSECAT00000022832
Macaca
sp. (Macaque) : ENSMMUT00000047761
Monodelphis
sp. (Opossum) : ENSMODT00000039007
Oryzias
sp. (Medaka) : ENSORLT00000001485
Pongo
sp. (Orangutan) : ENSPPYT00000024234
Pan
sp. (Chimpanzee) : ENSPTRT00000041650
Rattus
sp. (Rat) : ENSRNOT00000004559
Canis
sp. (Dog) : M33826
HIX0056112
HIT000339324
(
BC109215
)
(Coagulation factor IX; EC=3.4.21.22; Christmas factor; Plasma thromboplastin component; PTC; Contains: Coagulation factor IXa light chain; Contains: Coagulation factor IXa heavy chain; Precursor;)
genome : 138,612,895 - 138,645,187 (32,293)
query : 1 - 2,156 (2,156/2,156)
9 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.916)3'
coverage = 1.000
EC number :
EC 3.4.21.22
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000294 : Gamma-carboxyglutamic acid-rich (GLA) domain
IPR000742 : Epidermal growth factor-like domain
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR001881 : EGF-like calcium-binding domain
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR013032 : EGF-like, conserved site
IPR017857 : Coagulation factor, subgroup, Gla domain
IPR018097 : EGF-like calcium-binding, conserved site
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056112)
HIX0056112
HIT000103273 (
ENST00000218099
)
(Coagulation factor IX; EC=3.4.21.22; Christmas factor; Plasma thromboplastin component; PTC; Contains: Coagulation factor IXa light chain; Contains: Coagulation factor IXa heavy chain; Precursor;)
genome : 138,612,917 - 138,645,617 (32,701)
query : 1 - 2,780 (2,780/2,780)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.22
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056112)
HIX0056112
HIT000583670 (
ENST00000479617
)
(Coagulation factor IX; EC=3.4.21.22; Christmas factor; Plasma thromboplastin component; PTC; Contains: Coagulation factor IXa light chain; Contains: Coagulation factor IXa heavy chain; Precursor;)
genome : 138,612,917 - 138,630,551 (17,635)
query : 1 - 374 (374/374)
4 exons
identity = 0.987
5'(1.000;1.000;0.954;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.22
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056112)
HIX0056112
HIT000191049
(
J00137
)
(Coagulation factor IX; EC=3.4.21.22; Christmas factor; Plasma thromboplastin component; PTC; Contains: Coagulation factor IXa light chain; Contains: Coagulation factor IXa heavy chain; Precursor;)
genome : 138,612,923 - 138,644,485 (31,563)
query : 1 - 1,639 (1,639/1,639)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995)3'
coverage = 1.000
EC number :
EC 3.4.21.22
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000294 : Gamma-carboxyglutamic acid-rich (GLA) domain
IPR000742 : Epidermal growth factor-like domain
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR001881 : EGF-like calcium-binding domain
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR013032 : EGF-like, conserved site
IPR017857 : Coagulation factor, subgroup, Gla domain
IPR018097 : EGF-like calcium-binding, conserved site
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056112)
HIX0056112
HIT000194108
(
M11309
)
(Coagulation factor IX; EC=3.4.21.22; Christmas factor; Plasma thromboplastin component; PTC; Contains: Coagulation factor IXa light chain; Contains: Coagulation factor IXa heavy chain; Precursor;)
genome : 138,612,924 - 138,645,617 (32,694)
query : 1 - 2,775 (2,775/2,775)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
EC number :
EC 3.4.21.22
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000294 : Gamma-carboxyglutamic acid-rich (GLA) domain
IPR000742 : Epidermal growth factor-like domain
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR001881 : EGF-like calcium-binding domain
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR013032 : EGF-like, conserved site
IPR017857 : Coagulation factor, subgroup, Gla domain
IPR018097 : EGF-like calcium-binding, conserved site
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056112)
HIX0056112
HIT000425546
(
AK292749
)
(Coagulation factor IX; EC=3.4.21.22; Christmas factor; Plasma thromboplastin component; PTC; Contains: Coagulation factor IXa light chain; Contains: Coagulation factor IXa heavy chain; Precursor;)
genome : 138,612,924 - 138,644,619 (31,696)
query : 1 - 1,775 (1,775/1,775)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.22
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000294 : Gamma-carboxyglutamic acid-rich (GLA) domain
IPR000742 : Epidermal growth factor-like domain
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR001881 : EGF-like calcium-binding domain
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR013032 : EGF-like, conserved site
IPR017857 : Coagulation factor, subgroup, Gla domain
IPR018097 : EGF-like calcium-binding, conserved site
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056112)
HIX0056112
HIT000191048
(
J00136
)
(Coagulation factor IX; EC=3.4.21.22; Christmas factor; Plasma thromboplastin component; PTC; Contains: Coagulation factor IXa light chain; Contains: Coagulation factor IXa heavy chain; Precursor;)
genome : 138,612,924 - 138,644,278 (31,355)
query : 1 - 1,437 (1,437/1,437)
8 exons
identity = 0.992
5'(0.989;0.982;1.000;1.000;1.000;0.985;1.000;
0.993)3'
coverage = 1.000
EC number :
EC 3.4.21.22
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000294 : Gamma-carboxyglutamic acid-rich (GLA) domain
IPR000742 : Epidermal growth factor-like domain
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR001881 : EGF-like calcium-binding domain
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR013032 : EGF-like, conserved site
IPR017857 : Coagulation factor, subgroup, Gla domain
IPR018097 : EGF-like calcium-binding, conserved site
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, E.R. 5, pero 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056112)
HIX0056112
HIT000242525
(
AB186358
)
(Coagulation factor IX; EC=3.4.21.22; Christmas factor; Plasma thromboplastin component; PTC; Contains: Coagulation factor IXa light chain; Contains: Coagulation factor IXa heavy chain; Precursor;)
genome : 138,612,924 - 138,644,230 (31,307)
query : 1 - 1,272 (1,272/1,272)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.22
InterPro :
IPR000294 : Gamma-carboxyglutamic acid-rich (GLA) domain
IPR000742 : Epidermal growth factor-like domain
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR017857 : Coagulation factor, subgroup, Gla domain
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 4, pero 2, E.R._mito 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056112)
HIX0056112
HIT000477510 (
ENST00000394090
)
(Coagulation factor IX; EC=3.4.21.22; Christmas factor; Plasma thromboplastin component; PTC; Contains: Coagulation factor IXa light chain; Contains: Coagulation factor IXa heavy chain; Precursor;)
genome : 138,612,924 - 138,644,230 (31,307)
query : 1 - 1,272 (1,272/1,272)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.22
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 4, pero 2, E.R._mito 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056112)
HIX0056112
HIT000647329
(
FR846238
)
(Coagulation factor IX; EC=3.4.21.22; Christmas factor; Plasma thromboplastin component; PTC; Contains: Coagulation factor IXa light chain; Contains: Coagulation factor IXa heavy chain; Precursor;)
genome : 138,612,924 - 138,644,230 (31,307)
query : 1 - 1,386 (1,386/1,386)
8 exons
identity = 0.996
5'(0.989;1.000;1.000;1.000;1.000;0.995;1.000;
0.993)3'
coverage = 1.000
EC number :
EC 3.4.21.22
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000294 : Gamma-carboxyglutamic acid-rich (GLA) domain
IPR000742 : Epidermal growth factor-like domain
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR001881 : EGF-like calcium-binding domain
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR013032 : EGF-like, conserved site
IPR017857 : Coagulation factor, subgroup, Gla domain
IPR018097 : EGF-like calcium-binding, conserved site
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 6.66667, cyto 6, cyto_pero 5.66667,
nucl 5, mito 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056112)
HIX0056112
HIT000647330
(
FR846239
)
(Coagulation factor IX; EC=3.4.21.22; Christmas factor; Plasma thromboplastin component; PTC; Contains: Coagulation factor IXa light chain; Contains: Coagulation factor IXa heavy chain; Precursor;)
genome : 138,612,924 - 138,644,230 (31,307)
query : 1 - 1,386 (1,386/1,386)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.22
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000294 : Gamma-carboxyglutamic acid-rich (GLA) domain
IPR000742 : Epidermal growth factor-like domain
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR001881 : EGF-like calcium-binding domain
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR013032 : EGF-like, conserved site
IPR017857 : Coagulation factor, subgroup, Gla domain
IPR018097 : EGF-like calcium-binding, conserved site
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056112)
HIX0056112
HIT000647331
(
FR846240
)
(Coagulation factor IX; EC=3.4.21.22; Christmas factor; Plasma thromboplastin component; PTC; Contains: Coagulation factor IXa light chain; Contains: Coagulation factor IXa heavy chain; Precursor;)
genome : 138,612,924 - 138,644,230 (31,307)
query : 1 - 1,386 (1,386/1,386)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.992;1.000;1.000;
0.996)3'
coverage = 1.000
EC number :
EC 3.4.21.22
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000294 : Gamma-carboxyglutamic acid-rich (GLA) domain
IPR000742 : Epidermal growth factor-like domain
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR001881 : EGF-like calcium-binding domain
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR013032 : EGF-like, conserved site
IPR017857 : Coagulation factor, subgroup, Gla domain
IPR018097 : EGF-like calcium-binding, conserved site
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056112)
HIX0056112
HIT000195646
(
M35672
)
(Coagulation factor IX; EC=3.4.21.22; Christmas factor; Plasma thromboplastin component; PTC; Contains: Coagulation factor IXa light chain; Contains: Coagulation factor IXa heavy chain; Precursor;)
genome : 138,619,186 - 138,643,822 (24,637)
query : 1 - 873 (873/873)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.22
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000294 : Gamma-carboxyglutamic acid-rich (GLA) domain
IPR000742 : Epidermal growth factor-like domain
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR001881 : EGF-like calcium-binding domain
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR013032 : EGF-like, conserved site
IPR017857 : Coagulation factor, subgroup, Gla domain
IPR018097 : EGF-like calcium-binding, conserved site
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 10.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056112)
HIX0056106
HIT000619936 (
ENST00000520602
)
(Proto-oncogene DBL isoform a.)
genome : 138,663,929 - 138,774,315 (110,387)
query : 1 - 3,945 (3,945/3,945)
28 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, nucl 5.5, pero 4, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000485467 (
NM_001099855
)
(Proto-oncogene DBL isoform a.)
genome : 138,663,930 - 138,790,381 (126,452)
query : 1 - 3,819 (3,819/3,819)
28 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.1667, nucl 11, cyto_mito 10,
cyto_plas 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000654833 (
NM_001171876
)
(Proto-oncogene DBL isoform c.)
genome : 138,663,930 - 138,790,381 (126,452)
query : 1 - 3,867 (3,867/3,867)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.6667, nucl 11.5,
cyto_mito 9.66667, cyto_plas 9.16667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000512912 (
ENST00000414978
)
(Proto-oncogene DBL isoform a.)
genome : 138,663,930 - 138,790,375 (126,446)
query : 1 - 3,813 (3,813/3,813)
28 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.1667, nucl 11, cyto_mito 10,
cyto_plas 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000351858 (
ENST00000370578
)
(Proto-oncogene DBL isoform a.)
genome : 138,663,930 - 138,774,284 (110,355)
query : 1 - 3,913 (3,913/3,913)
28 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, nucl 5.5, pero 4, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000250268
(
AL117234
)
Representative transcript
(Proto-oncogene DBL isoform a.)
genome : 138,663,930 - 138,733,947 (70,018)
query : 1 - 3,702 (3,702/3,702)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR001251 : CRAL-TRIO domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001849 : Pleckstrin homology domain
IPR018159 : Spectrin/alpha-actinin
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.1667, nucl 11, cyto_mito 10,
cyto_plas 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179319
Mus
sp. (Mouse) : AK045424
Danio
sp. (Zebrafish) : ENSDART00000089389
Equus
sp. (Horse) : ENSECAT00000008510
Oryzias
sp. (Medaka) : ENSORLT00000002015
Pongo
sp. (Orangutan) : ENSPPYT00000024236
Pan
sp. (Chimpanzee) : ENSPTRT00000041655
Rattus
sp. (Rat) : ENSRNOT00000004603
Tetraodon
sp. (Tetraodon) : GSTENT00031250001
Takifugu
sp. (Fugu) : SINFRUT00000151738
Monodelphis
sp. (Opossum) : XM_001366696
Gallus
sp. (Chicken) : XM_420239
Canis
sp. (Dog) : XM_549296
Bos
sp. (Cow) : XM_610695
Danio
sp. (Zebrafish) : XM_680215
HIX0056106
HIT000202064 (
NM_005369
)
(Proto-oncogene DBL; Proto-oncogene MCF-2; Contains: MCF2-transforming protein; Contains: DBL-transforming protein;)
genome : 138,663,930 - 138,725,000 (61,071)
query : 1 - 3,801 (3,801/3,801)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 5.5, cyto_nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000635319 (
ENST00000536274
)
(Proto-oncogene DBL isoform d.)
genome : 138,663,930 - 138,725,000 (61,071)
query : 1 - 3,461 (3,461/3,461)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 5.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000654834 (
NM_001171877
)
(Proto-oncogene DBL isoform d.)
genome : 138,663,930 - 138,725,000 (61,071)
query : 1 - 3,461 (3,461/3,461)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 5.5, cyto_nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000654835 (
NM_001171878
)
(Proto-oncogene DBL isoform e.)
genome : 138,663,930 - 138,725,000 (61,071)
query : 1 - 3,578 (3,578/3,578)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 15.3333, cyto 6,
cyto_nucl 4.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000654836 (
NM_001171879
)
(Proto-oncogene DBL; Proto-oncogene MCF-2; Contains: MCF2-transforming protein; Contains: DBL-transforming protein;)
genome : 138,663,930 - 138,725,000 (61,071)
query : 1 - 3,849 (3,849/3,849)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 5.5, cyto_nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000351856 (
ENST00000370576
)
(Proto-oncogene DBL; Proto-oncogene MCF-2; Contains: MCF2-transforming protein; Contains: DBL-transforming protein;)
genome : 138,663,930 - 138,724,887 (60,958)
query : 1 - 3,688 (3,688/3,688)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 5.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000321316
(
X12556
)
(Proto-oncogene DBL; Proto-oncogene MCF-2; Contains: MCF2-transforming protein; Contains: DBL-transforming protein;)
genome : 138,663,930 - 138,724,842 (60,913)
query : 12 - 3,652 (3,641/3,652)
25 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;0.981)5'
coverage = 1.000
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR001251 : CRAL-TRIO domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001849 : Pleckstrin homology domain
IPR018159 : Spectrin/alpha-actinin
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 5.5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000535498 (
ENST00000437564
)
(Proto-oncogene DBL; Proto-oncogene MCF-2; Contains: MCF2-transforming protein; Contains: DBL-transforming protein;)
genome : 138,663,930 - 138,687,938 (24,009)
query : 1 - 1,988 (1,988/1,988)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 8, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000491112
(
AK296488
)
(Proto-oncogene DBL isoform d.)
genome : 138,664,189 - 138,725,000 (60,812)
query : 1 - 3,202 (3,202/3,202)
22 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.992;0.989;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;0.993;1.000;1.000;
0.992)5'
coverage = 1.000
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001849 : Pleckstrin homology domain
IPR018159 : Spectrin/alpha-actinin
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 5.5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000491153
(
AK296529
)
(Proto-oncogene DBL isoform d.)
genome : 138,664,190 - 138,774,290 (110,101)
query : 1 - 3,436 (3,436/3,436)
26 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;0.991;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR001251 : CRAL-TRIO domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001849 : Pleckstrin homology domain
IPR018159 : Spectrin/alpha-actinin
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12, nucl 4, pero 4, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000321355
(
X13230
)
(Proto-oncogene DBL isoform f.)
genome : 138,664,301 - 138,697,214 (32,914)
query : 117 - 2,035 (1,919/2,035)
16 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;0.978;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.943
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001849 : Pleckstrin homology domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 14, cyto 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000544159 (
ENST00000446225
)
(Proto-oncogene DBL; Proto-oncogene MCF-2; Contains: MCF2-transforming protein; Contains: DBL-transforming protein;)
genome : 138,664,301 - 138,697,211 (32,911)
query : 1 - 1,916 (1,916/1,916)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 13.5, cyto_golg 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000619242 (
ENST00000519895
)
(Proto-oncogene DBL isoform c.)
genome : 138,664,456 - 138,790,386 (125,931)
query : 1 - 3,346 (3,346/3,346)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.6667, nucl 11.5,
cyto_mito 9.66667, cyto_plas 9.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000500029
(
AK316416
)
(Proto-oncogene DBL isoform c.)
genome : 138,664,456 - 138,790,369 (125,914)
query : 1 - 3,329 (3,329/3,329)
29 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.990)5'
coverage = 1.000
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR001251 : CRAL-TRIO domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001849 : Pleckstrin homology domain
IPR018159 : Spectrin/alpha-actinin
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.1667, nucl 11, cyto_mito 10,
cyto_plas 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000435955
(
BC151247
)
(Proto-oncogene DBL; Proto-oncogene MCF-2; Contains: MCF2-transforming protein; Contains: DBL-transforming protein;)
genome : 138,664,580 - 138,724,814 (60,235)
query : 1 - 3,012 (3,012/3,019)
26 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.989;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.989)5'
coverage = 0.998
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR001251 : CRAL-TRIO domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001849 : Pleckstrin homology domain
IPR018159 : Spectrin/alpha-actinin
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 5.5, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000061444
(
AB085901
)
(Proto-oncogene DBL isoform e.)
genome : 138,664,602 - 138,724,677 (60,076)
query : 1 - 2,583 (2,583/2,583)
23 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000)5'
coverage = 1.000
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR001251 : CRAL-TRIO domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001849 : Pleckstrin homology domain
IPR018159 : Spectrin/alpha-actinin
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 5.5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000351853 (
ENST00000370573
)
(Proto-oncogene DBL; Proto-oncogene MCF-2; Contains: MCF2-transforming protein; Contains: DBL-transforming protein;)
genome : 138,664,602 - 138,724,677 (60,076)
query : 1 - 2,583 (2,583/2,583)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 15.3333, cyto 6,
cyto_nucl 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000497581
(
AK302957
)
(Proto-oncogene DBL isoform c.)
genome : 138,664,615 - 138,790,329 (125,715)
query : 1 - 3,130 (3,130/3,130)
29 exons
identity = 0.999
3'(1.000;0.991;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR001251 : CRAL-TRIO domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001849 : Pleckstrin homology domain
IPR018159 : Spectrin/alpha-actinin
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.6667, nucl 11.5,
cyto_mito 9.66667, cyto_plas 9.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000432766
(
AK313900
)
(Proto-oncogene DBL; Proto-oncogene MCF-2; Contains: MCF2-transforming protein; Contains: DBL-transforming protein;)
genome : 138,664,630 - 138,724,842 (60,213)
query : 19 - 2,961 (2,943/2,961)
25 exons
identity = 0.999
3'(1.000;0.991;1.000;1.000;1.000;1.000;1.000;
0.992;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR001251 : CRAL-TRIO domain
IPR001849 : Pleckstrin homology domain
IPR018159 : Spectrin/alpha-actinin
GO :
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0035023 : Biological Process : regulation of Rho protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 5.5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000061445
(
AB085902
)
(Proto-oncogene DBL; Proto-oncogene MCF-2; Contains: MCF2-transforming protein; Contains: DBL-transforming protein;)
genome : 138,664,630 - 138,724,677 (60,048)
query : 1 - 2,826 (2,826/2,826)
26 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000)5'
coverage = 1.000
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR001251 : CRAL-TRIO domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001849 : Pleckstrin homology domain
IPR018159 : Spectrin/alpha-actinin
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 5.5, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000131215 (
ENST00000338585
)
(Proto-oncogene DBL; Proto-oncogene MCF-2; Contains: MCF2-transforming protein; Contains: DBL-transforming protein;)
genome : 138,664,630 - 138,724,677 (60,048)
query : 1 - 2,826 (2,826/2,826)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 5.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0056106
HIT000587566 (
ENST00000483690
)
(Proto-oncogene DBL isoform f.)
genome : 138,689,343 - 138,697,109 (7,767)
query : 1 - 752 (752/752)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 9, cyto 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056106)
HIX0017090
HIT000056967
(
BX648320
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,808,509 - 138,870,420 (61,912)
query : 1 - 4,451 (4,451/4,472)
16 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000057628
(
BX648981
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,808,505 - 138,857,115 (48,611)
query : 16 - 4,074 (4,059/4,091)
12 exons
identity = 0.997
3'(0.996;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;0.986;1.000;1.000;0.996)5'
coverage = 0.996
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR023214 : HAD-like domain
GO :
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, E.R. 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000215068 (
NM_173694
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,808,505 - 138,914,447 (105,943)
query : 1 - 6,118 (6,118/6,128)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000316790 (
NM_001010986
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,808,505 - 138,914,447 (105,943)
query : 1 - 6,013 (6,013/6,023)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.991;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000351837 (
ENST00000370557
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,808,505 - 139,015,229 (206,725)
query : 1 - 6,924 (6,924/6,924)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000249123
(
AJ580093
)
Representative transcript
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,808,508 - 138,914,447 (105,940)
query : 3 - 6,118 (6,116/6,118)
30 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR008250 : P-type ATPase, A domain
IPR018303 : P-type ATPase, phosphorylation site
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC106087
Gallus
sp. (Chicken) : CR387470
Equus
sp. (Horse) : ENSECAT00000006990
Oryzias
sp. (Medaka) : ENSORLT00000001980
Pongo
sp. (Orangutan) : ENSPPYT00000024237
Tetraodon
sp. (Tetraodon) : GSTENT00027114001
Takifugu
sp. (Fugu) : SINFRUT00000183556
Macaca
sp. (Macaque) : XM_001084697
Monodelphis
sp. (Opossum) : XM_001366904
Canis
sp. (Dog) : XM_538187
Bos
sp. (Cow) : XM_608143
Danio
sp. (Zebrafish) : XM_693259
Rattus
sp. (Rat) : XR_007360
Pan
sp. (Chimpanzee) : XR_023079
HIX0017090
HIT000249124
(
AJ580094
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,808,508 - 138,914,447 (105,940)
query : 3 - 6,013 (6,011/6,013)
29 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.991;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR008250 : P-type ATPase, A domain
IPR018303 : P-type ATPase, phosphorylation site
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000125062 (
ENST00000327569
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,808,508 - 138,914,447 (105,940)
query : 1 - 6,115 (6,115/6,115)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000314904 (
ENST00000361648
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,808,508 - 138,914,447 (105,940)
query : 1 - 6,010 (6,010/6,010)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000045347
(
AK125474
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,808,508 - 138,850,491 (41,984)
query : 1 - 3,648 (3,648/3,648)
11 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR023214 : HAD-like domain
GO :
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000531802 (
ENST00000433868
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,808,508 - 138,827,950 (19,443)
query : 1 - 3,113 (3,113/3,113)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, lyso 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000045349
(
AK125476
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,808,508 - 138,824,093 (15,586)
query : 1 - 3,778 (3,778/3,778)
4 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR006539 : P-type ATPase, subfamily IV
GO :
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, plas 9.5, extr_plas 6, E.R._mito 3.5, pero 3,
E.R. 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000018701
(
AK093835
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,808,508 - 138,820,123 (11,616)
query : 1 - 2,768 (2,768/2,768)
3 exons
identity = 0.999
3'(0.998;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR006539 : P-type ATPase, subfamily IV
GO :
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 7.5, E.R._mito 7.5, mito_pero 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000016419
(
AK091552
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,808,512 - 138,832,212 (23,701)
query : 1 - 3,165 (3,165/3,165)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR006539 : P-type ATPase, subfamily IV
GO :
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, lyso 11, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000548735 (
ENST00000450801
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,808,512 - 138,832,212 (23,701)
query : 1 - 3,165 (3,165/3,165)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, lyso 11, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000100587
(
D16467
)
(Hypothetical short protein.)
genome : 138,808,512 - 138,809,196 (685)
query : 1 - 684 (684/684)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000390781
(
BC132728
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,809,080 - 138,914,385 (105,306)
query : 1 - 5,481 (5,481/5,481)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR008250 : P-type ATPase, A domain
IPR018303 : P-type ATPase, phosphorylation site
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000390783
(
BC132730
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,809,080 - 138,914,385 (105,306)
query : 1 - 5,481 (5,481/5,481)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR008250 : P-type ATPase, A domain
IPR018303 : P-type ATPase, phosphorylation site
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000045859
(
AK125986
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,810,945 - 138,879,440 (68,496)
query : 1 - 2,759 (2,759/2,759)
21 exons
identity = 0.999
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;0.986;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR018303 : P-type ATPase, phosphorylation site
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, nucl 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000565689 (
ENST00000460773
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,810,945 - 138,879,440 (68,496)
query : 1 - 2,750 (2,750/2,750)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, nucl 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000249550
(
AK131262
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,810,945 - 138,867,434 (56,490)
query : 1 - 1,954 (1,954/1,954)
15 exons
identity = 0.999
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
InterPro :
IPR001757 : P-type ATPase
IPR006539 : P-type ATPase, subfamily IV
IPR023214 : HAD-like domain
IPR023299 : P-type ATPase, cytoplasmic domain N
GO :
0000166 : Molecular Function : nucleotide binding
0000287 : Molecular Function : magnesium ion binding
0004012 : Molecular Function : phospholipid-translocating ATPase activity
0005524 : Molecular Function : ATP binding
0006812 : Biological Process : cation transport
0015914 : Biological Process : phospholipid transport
0016021 : Cellular Component : integral component of membrane
0019829 : Molecular Function : cation-transporting ATPase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000351823 (
ENST00000370543
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,814,595 - 138,914,447 (99,853)
query : 1 - 3,486 (3,486/3,486)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000313177 (
ENST00000359686
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,819,926 - 138,914,447 (94,522)
query : 1 - 3,426 (3,426/3,426)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000576157 (
ENST00000471746
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,832,250 - 138,864,792 (32,543)
query : 1 - 897 (897/897)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000520162 (
ENST00000422228
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,864,716 - 138,871,589 (6,874)
query : 1 - 606 (606/606)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 10, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0017090
HIT000589422 (
ENST00000485626
)
(Probable phospholipid-transporting ATPase IG; EC=3.6.3.1; ATPase IQ; ATPase class VI type 11C;)
genome : 138,884,461 - 139,027,435 (142,975)
query : 1 - 643 (643/643)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.3.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 25.5, extr_plas 13.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017090)
HIX0176887
HIT000506542 (
ENST00000408448
)
(Hypothetical short protein.)
genome : 138,967,640 - 138,967,762 (123)
query : 1 - 123 (123/123)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176887)
HIX0213586
HIT000616313 (
ENST00000516910
)
(Non-protein coding transcript.)
genome : 138,992,063 - 138,992,193 (131)
query : 1 - 131 (131/131)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213586)
HIX0159435
HIT000470857 (
ENST00000384901
)
(Non-protein coding transcript.)
genome : 139,006,307 - 139,006,390 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159435)
HIX0159435
HIT000658251 (
NR_030230
)
(Non-protein coding transcript.)
genome : 139,006,307 - 139,006,390 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159435)
HIX0077155
HIT000365235 (
NM_001013403
)
(Conserved hypothetical protein.)
genome : 139,037,884 - 139,047,677 (9,794)
query : 1 - 1,279 (1,279/1,281)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077155)
HIX0077155
HIT000351820 (
ENST00000370540
)
(Conserved hypothetical protein.)
genome : 139,037,884 - 139,047,679 (9,796)
query : 1 - 1,281 (1,281/1,281)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077155)
HIX0077155
HIT000501111
(
BC137148
)
Representative transcript
(Conserved hypothetical protein.)
genome : 139,037,925 - 139,047,677 (9,753)
query : 1 - 1,238 (1,238/1,238)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077155)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK135660
Canis
sp. (Dog) : ENSCAFT00000035732
Rattus
sp. (Rat) : XM_001054718
Macaca
sp. (Macaque) : XM_001084932
Pan
sp. (Chimpanzee) : XM_001139133
Equus
sp. (Horse) : XM_001915889
HIX0077155
HIT000501112
(
BC137149
)
(Conserved hypothetical protein.)
genome : 139,037,925 - 139,047,677 (9,753)
query : 1 - 1,238 (1,238/1,238)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077155)
HIX0056481
HIT000515360 (
ENST00000417426
)
(Conserved hypothetical protein.)
genome : 139,099,427 - 139,100,196 (770)
query : 1 - 582 (582/582)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 15.5, cyto 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056481)
HIX0123116
HIT000514772 (
ENST00000416838
)
(RNA recognition motif domain containing protein.)
genome : 139,114,503 - 139,115,639 (1,137)
query : 1 - 1,137 (1,137/1,137)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20, mito 6, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123116)
HIX0123116
HIT000522670_05 (
ENST00000424736
)
(Hypothetical protein.)
genome : 139,114,572 - 139,115,637 (1,066)
query : 3 - 1,029 (1,027/1,029)
2 exons
identity = 0.954
5'(0.948;0.965)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 24, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123116)
HIX0123116
HIT000530391_03 (
ENST00000432457
)
(Nuclear factor hnRNPA1 family protein.)
genome : 139,115,081 - 139,115,939 (859)
query : 2 - 643 (642/643)
2 exons
identity = 0.953
5'(0.891;0.973)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14.5, cyto 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123116)
HIX0123116
HIT000510472_05 (
ENST00000412538
)
(Nuclear factor hnRNPA1 family protein.)
genome : 139,115,445 - 139,115,665 (221)
query : 1 - 221 (221/221)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10.5, cyto_nucl 9.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123116)
HIX0123116
HIT000476817_05 (
ENST00000393361
)
(Nuclear factor hnRNPA1 family protein.)
genome : 139,115,451 - 139,115,642 (192)
query : 1 - 192 (192/192)
1 exon
identity = 0.979
5'(0.979)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, extr 9, cyto 9, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123116)
HIX0123116
HIT000532289_05 (
ENST00000434355
)
(Nuclear factor hnRNPA1 family protein.)
genome : 139,115,451 - 139,115,642 (192)
query : 1 - 192 (192/192)
1 exon
identity = 0.979
5'(0.979)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, extr 9, cyto 9, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123116)
HIX0177499
HIT000724958 (
NM_001271560
)
(Protein of unknown function DUF4588 family protein.)
genome : 139,173,826 - 139,175,069 (1,244)
query : 1 - 1,244 (1,244/1,254)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177499)
HIX0177499
HIT000551314 (
ENST00000453380
)
(Protein of unknown function DUF4588 family protein.)
genome : 139,173,902 - 139,174,720 (819)
query : 1 - 819 (819/819)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177499)
HIX0177499
pHIT000123835 ( pHIT000123835 )
Representative transcript
(Conserved hypothetical protein.)
genome : 139,174,175 - 139,174,723 (549)
query : 1 - 549 (549/549)
1 exon
InterPro :
IPR029196 : Protein of unknown function DUF4588
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177499)
CAGE tag :
T0XF0848FD39
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC065877
Macaca
sp. (Macaque) : ENSMMUT00000022322
Pongo
sp. (Orangutan) : ENSPPYT00000024239
Rattus
sp. (Rat) : XM_001054786
Equus
sp. (Horse) : XM_001489571
Mus
sp. (Mouse) : XM_205232
Pan
sp. (Chimpanzee) : XM_521291
Canis
sp. (Dog) : XM_549297
HIX0177579
HIT000556511 (
ENST00000458577
)
(Conserved hypothetical protein.)
genome : 139,298,187 - 139,298,956 (770)
query : 1 - 582 (582/582)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 15.5, cyto 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177579)
HIX0177026
HIT000518424 (
ENST00000420490
)
(Conserved hypothetical protein.)
genome : 139,479,227 - 139,480,476 (1,250)
query : 1 - 1,226 (1,226/1,226)
1 exon
identity = 0.981
5'(0.981)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177026)
HIX0260893
HIT000696045 (
ENST00000584172
)
(Non-protein coding transcript.)
genome : 139,486,264 - 139,486,355 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260893)
HIX0177013
HIT000517326 (
ENST00000419392
)
(Conserved hypothetical protein.)
genome : 139,553,031 - 139,553,439 (409)
query : 1 - 409 (409/409)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.5, cyto_plas 11.1667, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177013)
HIX0056279
HIT000202312 (
NM_005634
)
(Transcription factor SOX-3;)
genome : 139,585,152 - 139,587,225 (2,074)
query : 1 - 2,074 (2,074/2,074)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_mito 10.3333, mito_pero 9.33333, nucl 7,
extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056279)
HIX0056279
HIT000351816 (
ENST00000370536
)
(Transcription factor SOX-3;)
genome : 139,585,152 - 139,587,225 (2,074)
query : 1 - 2,074 (2,074/2,074)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_mito 10.3333, mito_pero 9.33333, nucl 7,
extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056279)
HIX0056279
HIT000334838
(
BC093863
)
Representative transcript
(Transcription factor SOX-3;)
genome : 139,585,851 - 139,587,281 (1,431)
query : 1 - 1,431 (1,431/1,431)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR022097 : Transcription factor SOX
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_mito 10.3333, mito_pero 9.33333, nucl 7,
extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056279)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AB011803
Oryzias
sp. (Medaka) : AJ245396
Mus
sp. (Mouse) : BC052024
Danio
sp. (Zebrafish) : BC092845
Pongo
sp. (Orangutan) : ENSPPYT00000024240
Tetraodon
sp. (Tetraodon) : GSTENT00031242001
Takifugu
sp. (Fugu) : SINFRUT00000151720
Rattus
sp. (Rat) : XM_001054955
Macaca
sp. (Macaque) : XM_001085045
Monodelphis
sp. (Opossum) : XM_001367288
Equus
sp. (Horse) : XM_001915876
Canis
sp. (Dog) : XM_847841
HIX0056279
HIT000334840
(
BC093865
)
(Transcription factor SOX-3;)
genome : 139,585,861 - 139,587,281 (1,421)
query : 1 - 1,421 (1,421/1,421)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR022097 : Transcription factor SOX
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_mito 10.3333, mito_pero 9.33333, nucl 7,
extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056279)
HIX0056279
HIT000432686
(
AK313820
)
(Transcription factor SOX-3;)
genome : 139,585,885 - 139,587,234 (1,350)
query : 1 - 1,350 (1,350/1,350)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR022097 : Transcription factor SOX
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_mito 10.3333, mito_pero 9.33333, nucl 7,
extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056279)
HIX0056279
HIT000323153
(
X71137
)
(Transcription factor SOX-3;)
genome : 139,586,571 - 139,586,799 (229)
query : 1 - 229 (229/229)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 10, mito_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056279)
HIX0177499
pHIT000123835 ( pHIT000123835 )
Representative transcript
(Conserved hypothetical protein.)
genome : 139,174,175 - 139,174,723 (549)
query : 1 - 549 (549/549)
1 exon
InterPro :
IPR029196 : Protein of unknown function DUF4588
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177499)
CAGE tag :
T0XF0848FD39
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC065877
Macaca
sp. (Macaque) : ENSMMUT00000022322
Pongo
sp. (Orangutan) : ENSPPYT00000024239
Rattus
sp. (Rat) : XM_001054786
Equus
sp. (Horse) : XM_001489571
Mus
sp. (Mouse) : XM_205232
Pan
sp. (Chimpanzee) : XM_521291
Canis
sp. (Dog) : XM_549297
Z82204.1
138000001-138008371 F +
NCBI
AL023800.1
138008372-138081403 F +
NCBI
AL034416.1
138081404-138112826 F +
NCBI
AL023798.1
138112827-138220812 F -
NCBI
AL034398.1
138220813-138222318 F +
NCBI
Z81007.1
138222319-138305169 F +
NCBI
Z80903.1
138305170-138330763 F +
NCBI
Z82975.1
138330764-138436343 F +
NCBI
AL035262.1
138436344-138459645 F +
NCBI
AL008713.1
138459646-138531790 F +
NCBI
AL096887.10
138531791-138533596 F +
NCBI
AL645665.11
138533597-138610840 F +
NCBI
AL033403.1
138610841-138767397 F +
NCBI
AL161777.4
138767398-138827453 F +
NCBI
AL356785.18
138827454-138992925 F +
NCBI
AL590077.19
138992926-139062802 F +
NCBI
AL589987.25
139062803-139205612 F +
NCBI
AL138892.14
139205613-139208872 F +
NCBI
AL449183.1
139208873-139221860 F +
NCBI
AC004070.1
139221861-139331952 F +
NCBI
AL449184.1
139331953-139332059 F +
NCBI
AC004075.1
139332060-139436920 F -
NCBI
AL137014.14
139436921-139480082 F +
NCBI
AL121875.10
139480083-139600000 F +
NCBI