bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0260763
HIT000433982
(
AK315116
)
Representative transcript
(Sex comb on midleg-like protein 2;)
genome : 18,259,371 - 18,372,808 (113,438)
query : 1 - 2,072 (2,072/2,072)
14 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR004092 : Mbt repeat
IPR021987 : Protein of unknown function DUF3588
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 16, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260763)
HIX0260763
HIT000497688
(
AK303064
)
(Sex comb on midleg-like protein 2;)
genome : 18,259,388 - 18,372,806 (113,419)
query : 1 - 1,957 (1,957/1,957)
13 exons
identity = 0.999
3'(1.000)5'
coverage = 1.000
InterPro :
IPR004092 : Mbt repeat
IPR021987 : Protein of unknown function DUF3588
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 16, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260763)
HIX0176966
HIT000513983 (
ENST00000416049
)
(Non-protein coding transcript.)
genome : 18,359,336 - 18,359,466 (131)
query : 1 - 131 (131/131)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176966)
HIX0176966
HIT000714222 (
ENST00000602489
)
(Non-protein coding transcript.)
genome : 18,359,336 - 18,359,466 (131)
query : 1 - 131 (131/131)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176966)
HIX0021511
HIT000087576
(
BC010966
)
(Cyclin-dependent kinase-like 5; EC=2.7.11.22; Serine/threonine-protein kinase 9;)
genome : 18,443,703 - 18,622,283 (178,581)
query : 4 - 1,517 (1,514/1,535)
12 exons
identity = 0.996
5'(1.000;1.000;0.974;0.913;1.000;0.992;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 2.7.11.22
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 15, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021511)
HIX0021511
HIT000361275 (
ENST00000379996
)
(Cyclin-dependent kinase-like 5; EC=2.7.11.22; Serine/threonine-protein kinase 9;)
genome : 18,443,703 - 18,671,749 (228,047)
query : 1 - 3,453 (3,453/3,453)
21 exons
identity = 0.999
5'(1.000;1.000;0.974;0.913;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.22
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021511)
HIX0021511
HIT000200018 (
NM_003159
)
(Cyclin-dependent kinase-like 5; EC=2.7.11.22; Serine/threonine-protein kinase 9;)
genome : 18,443,725 - 18,671,749 (228,025)
query : 1 - 3,431 (3,431/3,434)
21 exons
identity = 0.999
5'(1.000;1.000;0.974;0.913;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 2.7.11.22
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 12.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021511)
HIX0021511
HIT000426310
(
AK307444
)
(Cyclin-dependent kinase-like 5; EC=2.7.11.22; Serine/threonine-protein kinase 9;)
genome : 18,443,728 - 18,638,059 (194,332)
query : 1 - 2,599 (2,599/2,599)
16 exons
identity = 0.998
5'(1.000;1.000;0.974;0.913;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.22
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021511)
HIX0021511
HIT000085331
(
AY217744
)
Representative transcript
(Cyclin-dependent kinase-like 5; EC=2.7.11.22; Serine/threonine-protein kinase 9;)
genome : 18,443,757 - 18,671,745 (227,989)
query : 1 - 3,395 (3,395/3,399)
21 exons
identity = 0.999
5'(1.000;1.000;0.974;0.913;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 2.7.11.22
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021511)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK139220
Bos
sp. (Cow) : ENSBTAT00000009766
Oryzias
sp. (Medaka) : ENSORLT00000004484
Oryzias
sp. (Medaka) : ENSORLT00000020491
Pongo
sp. (Orangutan) : ENSPPYT00000023519
Rattus
sp. (Rat) : ENSRNOT00000005061
Tetraodon
sp. (Tetraodon) : GSTENT00012107001
Tetraodon
sp. (Tetraodon) : GSTENT00018035001
Takifugu
sp. (Fugu) : SINFRUT00000149464
Takifugu
sp. (Fugu) : SINFRUT00000161964
Monodelphis
sp. (Opossum) : XM_001380680
Equus
sp. (Horse) : XM_001491076
Gallus
sp. (Chicken) : XM_425571
Canis
sp. (Dog) : XM_548881
Danio
sp. (Zebrafish) : XM_682675
Pan
sp. (Chimpanzee) : XR_023224
HIX0021511
HIT000325867
(
Y15057
)
(Cyclin-dependent kinase-like 5; EC=2.7.11.22; Serine/threonine-protein kinase 9;)
genome : 18,443,757 - 18,671,745 (227,989)
query : 1 - 3,395 (3,395/3,399)
21 exons
identity = 0.999
5'(1.000;1.000;0.974;0.913;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 2.7.11.22
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021511)
HIX0021511
HIT000361268 (
ENST00000379989
)
(Cyclin-dependent kinase-like 5; EC=2.7.11.22; Serine/threonine-protein kinase 9;)
genome : 18,460,308 - 18,671,745 (211,438)
query : 1 - 3,459 (3,459/3,459)
22 exons
identity = 0.999
5'(1.000;1.000;1.000;0.974;0.913;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.22
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021511)
HIX0021511
HIT000051620
(
BC036091
)
(Cyclin-dependent kinase-like 5; EC=2.7.11.22; Serine/threonine-protein kinase 9;)
genome : 18,460,344 - 18,671,748 (211,405)
query : 1 - 3,426 (3,426/3,441)
22 exons
identity = 0.997
5'(1.000;1.000;1.000;0.974;0.913;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.999;1.000;
0.981;1.000;1.000;0.992;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.22
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021511)
HIX0021511
HIT000366316 (
NM_001037343
)
(Cyclin-dependent kinase-like 5; EC=2.7.11.22; Serine/threonine-protein kinase 9;)
genome : 18,460,344 - 18,671,749 (211,406)
query : 1 - 3,427 (3,427/3,430)
22 exons
identity = 0.999
5'(1.000;1.000;1.000;0.974;0.913;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
EC number :
EC 2.7.11.22
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 12.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021511)
HIX0021511
HIT000715137
(
HQ171445
)
(Cyclin-dependent kinase-like 5; EC=2.7.11.22; Serine/threonine-protein kinase 9;)
genome : 18,525,217 - 18,646,877 (121,661)
query : 1 - 2,883 (2,883/2,883)
17 exons
identity = 0.997
5'(1.000;0.974;0.913;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999;1.000;1.000;1.000;
0.990;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.7.11.22
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021511)
HIX0176952
HIT000513051 (
ENST00000415117
)
(Connexin family protein.)
genome : 18,553,199 - 18,554,240 (1,042)
query : 1 - 1,042 (1,042/1,042)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, plas 6, mito 6, nucl 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176952)
HIX0021511
HIT000013493
(
AK056879
)
(Cyclin-dependent kinase-like 5; EC=2.7.11.22; Serine/threonine-protein kinase 9;)
genome : 18,605,806 - 18,607,935 (2,130)
query : 1 - 2,131 (2,131/2,131)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
EC number :
EC 2.7.11.22
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 9.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021511)
HIX0021511
HIT000324340
(
X89059
)
(Cyclin-dependent kinase-like 5; EC=2.7.11.22; Serine/threonine-protein kinase 9;)
genome : 18,622,067 - 18,638,060 (15,994)
query : 10 - 1,234 (1,225/1,252)
5 exons
identity = 0.996
5'(0.998;1.000;1.000;0.955;0.981)3'
coverage = 0.993
EC number :
EC 2.7.11.22
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021511)
HIX0021511
HIT000568764 (
ENST00000463994
)
(Cyclin-dependent kinase-like 5; EC=2.7.11.22; Serine/threonine-protein kinase 9;)
genome : 18,622,067 - 18,638,077 (16,011)
query : 1 - 1,243 (1,243/1,243)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.22
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021511)
HIX0016683
HIT000019298
(
AK094443
)
Representative transcript
(Conserved hypothetical protein.)
genome : 18,656,467 - 18,658,307 (1,841)
query : 1 - 1,841 (1,841/1,841)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.3333, cyto 11.5, nucl 11,
cyto_pero 7.66667, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016683)
HIX0056118
HIT000197375 (
NM_000330
)
(Retinoschisin; X-linked juvenile retinoschisis protein; Precursor;)
genome : 18,657,809 - 18,690,223 (32,415)
query : 1 - 3,025 (3,025/3,040)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7, extr_plas 7, mito 4, lyso 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056118)
HIX0056118
HIT000361263 (
ENST00000379984
)
(Retinoschisin; X-linked juvenile retinoschisis protein; Precursor;)
genome : 18,658,030 - 18,690,229 (32,200)
query : 1 - 2,810 (2,810/2,810)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7, extr_plas 7, mito 4, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056118)
HIX0056118
HIT000062289
(
AF014459
)
Representative transcript
(Retinoschisin; X-linked juvenile retinoschisis protein; Precursor;)
genome : 18,658,037 - 18,690,203 (32,167)
query : 1 - 2,772 (2,772/2,772)
6 exons
identity = 0.991
3'(0.988;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR008979 : Galactose-binding domain-like
GO :
0007155 : Biological Process : cell adhesion
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7, extr_plas 7, mito 4, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056118)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC046422
Danio
sp. (Zebrafish) : BC076183
Tetraodon
sp. (Tetraodon) : CR698361
Bos
sp. (Cow) : ENSBTAT00000044074
Macaca
sp. (Macaque) : ENSMMUT00000007141
Monodelphis
sp. (Opossum) : ENSMODT00000021758
Oryzias
sp. (Medaka) : ENSORLT00000004464
Oryzias
sp. (Medaka) : ENSORLT00000020496
Pongo
sp. (Orangutan) : ENSPPYT00000023520
Rattus
sp. (Rat) : ENSRNOT00000040912
Tetraodon
sp. (Tetraodon) : GSTENT00012109001
Takifugu
sp. (Fugu) : SINFRUT00000149457
Takifugu
sp. (Fugu) : SINFRUT00000161962
Equus
sp. (Horse) : XM_001491183
Canis
sp. (Dog) : XM_548882
Gallus
sp. (Chicken) : XR_026808
HIX0056118
HIT000250075
(
AL049684
)
(Retinoschisin; X-linked juvenile retinoschisis protein; Precursor;)
genome : 18,660,044 - 18,668,657 (8,614)
query : 1 - 1,246 (1,246/1,246)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR008979 : Galactose-binding domain-like
GO :
0007155 : Biological Process : cell adhesion
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 12.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056118)
HIX0056118
HIT000580783 (
ENST00000476595
)
(Retinoschisin; X-linked juvenile retinoschisis protein; Precursor;)
genome : 18,660,044 - 18,668,657 (8,614)
query : 1 - 1,246 (1,246/1,246)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 12.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056118)
HIX0056118
HIT000391935
(
DQ426892
)
(Retinoschisin; X-linked juvenile retinoschisis protein; Precursor;)
genome : 18,674,850 - 18,690,223 (15,374)
query : 1 - 142 (142/142)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 3, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056118)
HIX0028334
HIT000589804 (
ENST00000486029
)
(Hypothetical short protein.)
genome : 18,694,029 - 18,716,028 (22,000)
query : 1 - 561 (561/561)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0177177
HIT000528575 (
ENST00000430641
)
(Conserved hypothetical protein.)
genome : 18,706,762 - 18,709,723 (2,962)
query : 1 - 430 (430/430)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 6, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177177)
HIX0028334
HIT000314773 (
ENST00000361511
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,709,032 - 18,846,039 (137,008)
query : 1 - 2,890 (2,890/2,890)
19 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000325020
(
X97867
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,709,045 - 18,846,032 (136,988)
query : 6 - 2,872 (2,867/2,872)
19 exons
identity = 0.997
5'(0.982;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR002048 : EF-hand domain
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR011992 : EF-hand domain pair
IPR013235 : PPP domain
IPR018247 : EF-Hand 1, calcium-binding site
IPR029052 : Metallo-dependent phosphatase-like
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000202847 (
NM_006240
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,709,045 - 18,846,035 (136,991)
query : 1 - 2,873 (2,873/2,873)
19 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000213515 (
NM_152224
)
(Serine/threonine-protein phosphatase with EF-hands 1 isoform 1b.)
genome : 18,709,045 - 18,846,035 (136,991)
query : 1 - 2,789 (2,789/2,789)
19 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000213517 (
NM_152226
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,709,045 - 18,846,035 (136,991)
query : 1 - 2,687 (2,687/2,687)
18 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 2, cyto 2, cyto_nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000051590
(
BC036026
)
Representative transcript
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,709,046 - 18,846,039 (136,994)
query : 1 - 2,876 (2,876/2,892)
19 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR002048 : EF-hand domain
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR011992 : EF-hand domain pair
IPR013235 : PPP domain
IPR018247 : EF-Hand 1, calcium-binding site
IPR029052 : Metallo-dependent phosphatase-like
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169764
Danio
sp. (Zebrafish) : BC159114
Gallus
sp. (Chicken) : CR391112
Canis
sp. (Dog) : ENSCAFT00000020404
Equus
sp. (Horse) : ENSECAT00000014669
Oryzias
sp. (Medaka) : ENSORLT00000004450
Pongo
sp. (Orangutan) : ENSPPYT00000023521
Rattus
sp. (Rat) : ENSRNOT00000058946
Tetraodon
sp. (Tetraodon) : GSTENT00018033001
Takifugu
sp. (Fugu) : SINFRUT00000161960
Monodelphis
sp. (Opossum) : XM_001380647
Bos
sp. (Cow) : XM_580765
Pan
sp. (Chimpanzee) : XR_020285
HIX0028334
HIT000307862 (
ENST00000349874
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,709,046 - 18,846,039 (136,994)
query : 1 - 2,690 (2,690/2,690)
18 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000313247 (
ENST00000359763
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,709,046 - 18,846,039 (136,994)
query : 1 - 2,717 (2,717/2,717)
18 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000642675 (
ENST00000543630
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,709,046 - 18,846,039 (136,994)
query : 1 - 2,547 (2,547/2,547)
17 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26.5, cyto_mito 15.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000425032
(
AK292235
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,709,046 - 18,845,980 (136,935)
query : 1 - 2,817 (2,817/2,817)
19 exons
identity = 0.996
5'(1.000;1.000;0.981;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR002048 : EF-hand domain
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR011992 : EF-hand domain pair
IPR013235 : PPP domain
IPR018247 : EF-Hand 1, calcium-binding site
IPR029052 : Metallo-dependent phosphatase-like
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000599928 (
ENST00000496616
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,718,170 - 18,768,073 (49,904)
query : 1 - 906 (906/906)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto_nucl 3.16667, cyto_pero 3.16667, extr 3,
nucl 2, cyto 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000575992 (
ENST00000471570
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,718,170 - 18,768,070 (49,901)
query : 1 - 903 (903/903)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto_nucl 3.16667, cyto_pero 3.16667, extr 3,
nucl 2, cyto 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000062899
(
AF027977
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,725,760 - 18,846,033 (120,274)
query : 95 - 2,630 (2,536/2,658)
16 exons
identity = 0.994
5'(1.000;1.000;1.000)3'
coverage = 0.964
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR002048 : EF-hand domain
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR011992 : EF-hand domain pair
IPR013235 : PPP domain
IPR018247 : EF-Hand 1, calcium-binding site
IPR029052 : Metallo-dependent phosphatase-like
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000423260
(
AK290463
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,725,764 - 18,845,866 (120,103)
query : 1 - 2,359 (2,359/2,359)
16 exons
identity = 0.997
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR002048 : EF-hand domain
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR011992 : EF-hand domain pair
IPR013235 : PPP domain
IPR018247 : EF-Hand 1, calcium-binding site
IPR029052 : Metallo-dependent phosphatase-like
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000495439
(
AK300815
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,725,773 - 18,845,806 (120,034)
query : 1 - 2,162 (2,162/2,162)
15 exons
identity = 0.997
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR002048 : EF-hand domain
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR011992 : EF-hand domain pair
IPR013235 : PPP domain
IPR018247 : EF-Hand 1, calcium-binding site
IPR029052 : Metallo-dependent phosphatase-like
GO :
0005509 : Molecular Function : calcium ion binding
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 16.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000643680 (
ENST00000544635
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,725,773 - 18,845,806 (120,034)
query : 1 - 2,162 (2,162/2,162)
15 exons
identity = 0.997
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 16.5, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000577185 (
ENST00000472826
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,725,773 - 18,779,694 (53,922)
query : 1 - 557 (557/557)
5 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 8, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000599415 (
ENST00000496075
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,725,777 - 18,807,318 (81,542)
query : 1 - 757 (757/757)
7 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.8333, cyto 12.5, cyto_pero 8, extr 7,
nucl 7, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000434675
(
AK315809
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,725,803 - 18,845,811 (120,009)
query : 1 - 2,265 (2,265/2,265)
16 exons
identity = 0.997
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR002048 : EF-hand domain
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR011992 : EF-hand domain pair
IPR013235 : PPP domain
IPR018247 : EF-Hand 1, calcium-binding site
IPR029052 : Metallo-dependent phosphatase-like
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000062710
(
AF023455
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,725,818 - 18,846,033 (120,216)
query : 1 - 2,472 (2,472/2,486)
16 exons
identity = 0.997
5'(0.984;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR002048 : EF-hand domain
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR011992 : EF-hand domain pair
IPR013235 : PPP domain
IPR018247 : EF-Hand 1, calcium-binding site
IPR029052 : Metallo-dependent phosphatase-like
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000361241 (
ENST00000379962
)
(Serine/threonine-protein phosphatase with EF-hands 1; PPEF-1; EC=3.1.3.16; Protein phosphatase with EF calcium-binding domain; PPEF; Serine/threonine-protein phosphatase 7; PP7;)
genome : 18,748,282 - 18,845,778 (97,497)
query : 1 - 2,106 (2,106/2,106)
15 exons
identity = 0.998
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 21, cyto 8.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0028334
HIT000490128
(
AK295504
)
(Serine/threonine-protein phosphatase with EF-hands 1 isoform 1b.)
genome : 18,748,282 - 18,845,778 (97,497)
query : 1 - 2,106 (2,106/2,106)
15 exons
identity = 0.997
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.16
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR002048 : EF-hand domain
IPR004843 : Calcineurin-like phosphoesterase domain, apaH type
IPR006186 : Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
IPR011992 : EF-hand domain pair
IPR013235 : PPP domain
IPR018247 : EF-Hand 1, calcium-binding site
IPR029052 : Metallo-dependent phosphatase-like
GO :
0005509 : Molecular Function : calcium ion binding
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 21, cyto 8.5, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028334)
HIX0016682
HIT000096194
(
BC040497
)
(Sex comb on midleg-like protein 2;)
genome : 18,257,433 - 18,372,847 (115,415)
query : 2 - 4,201 (4,200/4,216)
15 exons
identity = 0.999
3'(0.993)5'
coverage = 1.000
InterPro :
IPR003118 : Pointed domain
IPR013761 : Sterile alpha motif/pointed domain
IPR021129 : Sterile alpha motif, type 1
IPR021987 : Protein of unknown function DUF3588
GO :
0005634 : Cellular Component : nucleus
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016682)
HIX0016682
HIT000099464
(
BC051913
)
Representative transcript
(Sex comb on midleg-like protein 2;)
genome : 18,257,433 - 18,372,786 (115,354)
query : 1 - 3,081 (3,081/3,096)
16 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR001660 : Sterile alpha motif domain
IPR004092 : Mbt repeat
IPR013761 : Sterile alpha motif/pointed domain
IPR021129 : Sterile alpha motif, type 1
IPR021987 : Protein of unknown function DUF3588
GO :
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016682)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK031490
Bos
sp. (Cow) : ENSBTAT00000012397
Oryzias
sp. (Medaka) : ENSORLT00000020479
Pongo
sp. (Orangutan) : ENSPPYT00000023516
Pan
sp. (Chimpanzee) : ENSPTRT00000040261
Rattus
sp. (Rat) : ENSRNOT00000031195
Tetraodon
sp. (Tetraodon) : GSTENT00012104001
Takifugu
sp. (Fugu) : SINFRUT00000149468
Macaca
sp. (Macaque) : XM_001083093
Monodelphis
sp. (Opossum) : XM_001380714
Equus
sp. (Horse) : XM_001490892
Canis
sp. (Dog) : XM_537972
Danio
sp. (Zebrafish) : XR_029032
HIX0016682
HIT000202712 (
NM_006089
)
(Sex comb on midleg-like protein 2;)
genome : 18,257,433 - 18,372,844 (115,412)
query : 1 - 4,198 (4,198/4,212)
15 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016682)
HIX0016682
HIT000658916 (
NR_033717
)
(Sex comb on midleg-like protein 2;)
genome : 18,257,433 - 18,372,844 (115,412)
query : 1 - 3,139 (3,139/3,153)
16 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016682)
HIX0016682
HIT000261536
(
BC064617
)
(Sex comb on midleg-like protein 2;)
genome : 18,257,433 - 18,372,801 (115,369)
query : 1 - 4,155 (4,155/4,169)
15 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR001660 : Sterile alpha motif domain
IPR004092 : Mbt repeat
IPR013761 : Sterile alpha motif/pointed domain
IPR021129 : Sterile alpha motif, type 1
IPR021987 : Protein of unknown function DUF3588
GO :
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016682)
HIX0016682
HIT000106212 (
ENST00000251900
)
(Sex comb on midleg-like protein 2;)
genome : 18,257,434 - 18,372,847 (115,414)
query : 1 - 4,200 (4,200/4,200)
15 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016682)
HIX0016682
HIT000326062
(
Y18004
)
(Sex comb on midleg-like protein 2;)
genome : 18,257,434 - 18,372,778 (115,345)
query : 1 - 4,130 (4,130/4,130)
15 exons
identity = 0.995
3'(1.000)5'
coverage = 1.000
InterPro :
IPR001660 : Sterile alpha motif domain
IPR004092 : Mbt repeat
IPR013761 : Sterile alpha motif/pointed domain
IPR021129 : Sterile alpha motif, type 1
IPR021987 : Protein of unknown function DUF3588
GO :
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016682)
Z93023.1
18357726-18442744 F -
NCBI
AL109798.19
18442745-18537737 F +
NCBI
Z92542.2
18537738-18683175 F +
NCBI
Z94056.1
18683176-18757725 F +
NCBI