bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0177533
HIT000727399 (
NR_073010
)
genome : 22,277,914 - 23,311,263 (1,033,350)
query : 1 - 557 (557/557)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177533)
HIX0177533
HIT000553333 (
ENST00000455399
)
genome : 22,407,432 - 23,082,236 (674,805)
query : 1 - 718 (718/718)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177533)
HIX0177549
HIT000554555 (
ENST00000456621
)
genome : 22,446,249 - 22,512,830 (66,582)
query : 1 - 389 (389/389)
3 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177549)
HIX0177070
HIT000520868 (
ENST00000422934
)
genome : 22,634,861 - 22,635,260 (400)
query : 1 - 400 (400/400)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177070)
HIX0177334
HIT000540089 (
ENST00000442155
)
genome : 22,716,574 - 22,787,083 (70,510)
query : 1 - 382 (382/382)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177334)
HIX0056193
HIT000083582
(
AY039237
)
genome : 23,018,078 - 23,020,205 (2,128)
query : 6 - 2,130 (2,125/2,153)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056193)
HIX0056193
HIT000318745 (
NM_182699
)
genome : 23,018,078 - 23,020,205 (2,128)
query : 1 - 2,128 (2,128/2,151)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056193)
HIX0056193
HIT000262845
(
BC067878
)
genome : 23,018,087 - 23,020,205 (2,119)
query : 1 - 2,119 (2,119/2,134)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056193)
HIX0056193
HIT000125292 (
ENST00000327968
)
genome : 23,018,087 - 23,020,204 (2,118)
query : 1 - 2,118 (2,118/2,118)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056193)
HIX0199470
HIT000313400_02 (
ENST00000359943
)
genome : 23,093,703 - 23,096,497 (2,795)
query : 43 - 2,508 (2,466/2,508)
2 exons
identity = 0.992
5'(0.996;0.990)3'
coverage = 0.983
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199470)
HIX0199470
pHIT000037721 ( pHIT000037721 )
genome : 23,093,875 - 23,155,096 (61,222)
query : 1 - 735 (735/735)
2 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199470)
CAGE tag :
H22BB50F1909
HIX0019094
HIT000004892
(
AK021618
)
genome : 23,110,035 - 23,112,302 (2,268)
query : 1 - 2,274 (2,274/2,274)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019094)
HIX0177009
HIT000517236 (
ENST00000419302
)
genome : 23,216,456 - 23,216,807 (352)
query : 1 - 352 (352/352)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177009)
HIX0016700
HIT000260344
(
BC062344
)
genome : 23,352,132 - 23,399,551 (47,420)
query : 1 - 2,289 (2,289/2,330)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016700)
HIX0016700
HIT000360640 (
ENST00000379361
)
genome : 23,352,133 - 23,422,489 (70,357)
query : 1 - 13,714 (13,714/13,714)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016700)
HIX0016700
HIT000493420
(
AK298796
)
genome : 23,352,985 - 23,412,419 (59,435)
query : 4 - 2,795 (2,792/2,795)
3 exons
identity = 0.999
5'(0.997;0.998;0.999)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016700)
HIX0016700
HIT000214881 (
NM_173495
)
genome : 23,352,985 - 23,414,918 (61,934)
query : 1 - 5,291 (5,291/5,305)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016700)
HIX0016700
HIT000011472
(
AK054858
)
genome : 23,353,095 - 23,412,419 (59,325)
query : 1 - 2,682 (2,682/2,682)
3 exons
identity = 0.998
5'(1.000;0.997;0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016700)
HIX0016700
HIT000388258
(
BC121061
)
genome : 23,353,138 - 23,412,328 (59,191)
query : 1 - 2,548 (2,548/2,548)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016700)
HIX0016700
HIT000554456 (
ENST00000456522
)
genome : 23,353,186 - 23,411,225 (58,040)
query : 1 - 736 (736/736)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016700)
HIX0177370
HIT000542981 (
ENST00000445047
)
genome : 23,369,130 - 23,369,567 (438)
query : 1 - 438 (438/438)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177370)
HIX0016700
HIT000046530
(
AK126657
)
genome : 23,418,629 - 23,422,490 (3,862)
query : 1 - 3,870 (3,870/3,870)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016700)
HIX0016701
HIT000360628 (
ENST00000379349
)
genome : 23,682,379 - 23,697,404 (15,026)
query : 1 - 815 (815/815)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016701)
HIX0016701
HIT000360621 (
ENST00000379341
)
genome : 23,685,563 - 23,704,516 (18,954)
query : 1 - 1,005 (1,005/1,005)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016701)
HIX0016701
HIT000598959 (
ENST00000495599
)
genome : 23,685,616 - 23,697,325 (11,710)
query : 1 - 632 (632/632)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016701)
HIX0016701
HIT000037681
(
BC016770
)
genome : 23,685,632 - 23,704,516 (18,885)
query : 2 - 937 (936/966)
7 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;1.000;1.000;0.991)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016701)
HIX0016701
HIT000033054
(
BC007107
)
genome : 23,685,641 - 23,704,514 (18,874)
query : 1 - 925 (925/954)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016701)
HIX0016701
HIT000203007 (
NM_006406
)
genome : 23,685,645 - 23,704,514 (18,870)
query : 1 - 921 (921/921)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016701)
HIX0016701
HIT000218762
(
U25182
)
genome : 23,685,645 - 23,704,514 (18,870)
query : 1 - 921 (921/921)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016701)
HIX0016701
HIT000360611 (
ENST00000379331
)
genome : 23,685,668 - 23,693,579 (7,912)
query : 1 - 852 (852/852)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016701)
HIX0016701
HIT000031638
(
BC003609
)
genome : 23,685,685 - 23,704,514 (18,830)
query : 1 - 881 (881/911)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016701)
HIX0016701
HIT000268541
(
CR541668
)
genome : 23,685,688 - 23,704,452 (18,765)
query : 1 - 816 (816/816)
7 exons
identity = 0.998
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016701)
HIX0016701
HIT000268578
(
CR541705
)
genome : 23,685,688 - 23,704,449 (18,762)
query : 1 - 813 (813/813)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016701)
HIX0016701
HIT000537356 (
ENST00000439422
)
genome : 23,693,116 - 23,704,512 (11,397)
query : 1 - 554 (554/554)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016701)
HIX0016702
HIT000070937
(
AF132950
)
genome : 23,719,621 - 23,761,367 (41,747)
query : 41 - 1,954 (1,914/1,954)
15 exons
identity = 0.994
3'(0.993;0.987;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.961)5'
coverage = 0.980
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000057159
(
BX648512
)
genome : 23,720,388 - 23,761,390 (41,003)
query : 2 - 3,096 (3,095/3,116)
15 exons
identity = 0.992
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.867;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000360583 (
ENST00000379303
)
genome : 23,720,388 - 23,761,390 (41,003)
query : 1 - 3,099 (3,099/3,117)
15 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.867;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000003134
(
AK000659
)
genome : 23,721,789 - 23,761,393 (39,605)
query : 1 - 1,674 (1,674/1,690)
15 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.944;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000002383
(
AF241787
)
genome : 23,721,795 - 23,725,124 (3,330)
query : 1 - 1,101 (1,101/1,120)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000366179 (
NM_001033583
)
genome : 23,721,777 - 23,761,407 (39,631)
query : 1 - 1,700 (1,700/1,700)
15 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.944;
1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000366280 (
NM_001037171
)
genome : 23,721,777 - 23,761,407 (39,631)
query : 1 - 1,727 (1,727/1,727)
15 exons
identity = 0.990
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.867;
1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000130086 (
ENST00000336430
)
genome : 23,721,788 - 23,761,393 (39,606)
query : 1 - 1,675 (1,675/1,675)
15 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.944;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000360577 (
ENST00000379297
)
genome : 23,721,794 - 23,725,317 (3,524)
query : 1 - 1,295 (1,295/1,295)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000007611
(
AK024337
)
genome : 23,721,801 - 23,784,592 (62,792)
query : 1 - 2,768 (2,768/2,768)
17 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.986;1.000;1.000;1.000;1.000;1.000;0.944;
1.000;1.000;0.999)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000360575 (
ENST00000379295
)
genome : 23,721,801 - 23,784,592 (62,792)
query : 1 - 2,768 (2,768/2,768)
17 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.944;
1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000597760 (
ENST00000494361
)
genome : 23,721,822 - 23,761,407 (39,586)
query : 1 - 1,682 (1,682/1,682)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000500675
(
BC136671
)
genome : 23,721,841 - 23,761,358 (39,518)
query : 1 - 1,587 (1,587/1,587)
15 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.944;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000502773
(
BC144360
)
genome : 23,721,841 - 23,761,358 (39,518)
query : 1 - 1,587 (1,587/1,587)
15 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.944;
1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000502783
(
BC144370
)
genome : 23,721,841 - 23,761,358 (39,518)
query : 1 - 1,513 (1,513/1,513)
14 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.944;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000578028 (
ENST00000473710
)
genome : 23,723,175 - 23,751,314 (28,140)
query : 1 - 793 (793/793)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000547546 (
ENST00000449612
)
genome : 23,725,834 - 23,740,859 (15,026)
query : 1 - 479 (479/479)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000595579 (
ENST00000492081
)
genome : 23,725,948 - 23,761,367 (35,420)
query : 1 - 683 (683/683)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0016702
HIT000035880
(
BC012573
)
genome : 23,731,244 - 23,761,374 (30,131)
query : 5 - 760 (756/790)
8 exons
identity = 0.992
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.944;
1.000)5'
coverage = 0.992
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016702)
HIX0260890
HIT000693057 (
ENST00000581149
)
genome : 23,774,289 - 23,774,398 (110)
query : 1 - 110 (110/110)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260890)
HIX0176780
HIT000347414 (
ENST00000366134
)
genome : 23,791,109 - 23,801,073 (9,965)
query : 1 - 672 (672/672)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176780)
HIX0176797
HIT000428944
(
AK310078
)
genome : 23,801,290 - 23,802,583 (1,294)
query : 1 - 977 (977/977)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176797)
HIX0176797
HIT000360533 (
ENST00000379253
)
genome : 23,801,290 - 23,802,528 (1,239)
query : 1 - 909 (909/909)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176797)
HIX0176797
HIT000360531 (
ENST00000379251
)
genome : 23,801,290 - 23,802,330 (1,041)
query : 1 - 801 (801/801)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176797)
HIX0176797
HIT000428960
(
AK310094
)
genome : 23,801,294 - 23,802,279 (986)
query : 1 - 958 (958/958)
1 exon
identity = 0.968
5'(0.968)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176797)
HIX0176797
HIT000434754
(
AK315888
)
genome : 23,801,352 - 23,802,599 (1,248)
query : 1 - 918 (918/918)
3 exons
identity = 0.998
5'(1.000;0.981;0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176797)
HIX0176797
HIT000591407 (
ENST00000487713
)
genome : 23,801,625 - 23,802,146 (522)
query : 1 - 432 (432/432)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176797)
HIX0260783
HIT000578519 (
ENST00000474223
)
genome : 23,802,870 - 23,804,117 (1,248)
query : 1 - 1,033 (1,033/1,033)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260783)
HIX0260783
HIT000567464 (
ENST00000462639
)
genome : 23,803,377 - 23,804,327 (951)
query : 1 - 826 (826/826)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260783)
HIX0020344
HIT000253158
(
AY359114
)
genome : 23,851,481 - 23,925,992 (74,512)
query : 1 - 1,048 (1,048/1,088)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020344)
HIX0020344
HIT000030805
(
BC002333
)
genome : 23,851,480 - 23,926,037 (74,558)
query : 1 - 1,094 (1,094/1,124)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020344)
HIX0020344
HIT000034801
(
BC010102
)
genome : 23,851,480 - 23,926,037 (74,558)
query : 1 - 1,094 (1,094/1,122)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020344)
HIX0020344
HIT000037697
(
BC016814
)
genome : 23,851,485 - 23,926,028 (74,544)
query : 5 - 1,084 (1,080/1,111)
9 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020344)
HIX0020344
HIT000209146 (
NM_024122
)
genome : 23,851,465 - 23,926,057 (74,593)
query : 1 - 1,129 (1,129/1,134)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.996
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020344)
HIX0020344
HIT000562796 (
NR_026545
)
genome : 23,851,465 - 23,926,057 (74,593)
query : 1 - 972 (972/977)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.995
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020344)
HIX0020344
HIT000360506 (
ENST00000379226
)
genome : 23,851,480 - 23,926,051 (74,572)
query : 1 - 1,108 (1,108/1,118)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020344)
HIX0020344
HIT000580786 (
ENST00000476598
)
genome : 23,851,477 - 23,858,522 (7,046)
query : 1 - 244 (244/244)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020344)
HIX0020344
HIT000537462 (
ENST00000439528
)
genome : 23,851,480 - 23,899,018 (47,539)
query : 1 - 714 (714/714)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020344)
HIX0020344
HIT000360500 (
ENST00000379220
)
genome : 23,851,481 - 23,926,057 (74,577)
query : 1 - 1,056 (1,056/1,056)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.979;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020344)
HIX0020344
HIT000064962
(
AF061264
)
genome : 23,851,484 - 23,926,020 (74,537)
query : 2 - 918 (917/918)
8 exons
identity = 0.997
3'(1.000;0.985;1.000;1.000;0.990;1.000;1.000;
0.995)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020344)
HIX0020344
HIT000593653 (
ENST00000490078
)
genome : 23,851,484 - 23,926,020 (74,537)
query : 1 - 916 (916/916)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020344)
HIX0056465
HIT000035693_04
(
BC012149
)
genome : 23,854,761 - 23,855,462 (702)
query : 37 - 738 (702/767)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.950
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056465)
HIX0056465
HIT000033561_04
(
BC007967
)
genome : 23,854,761 - 23,855,462 (702)
query : 37 - 738 (702/766)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.950
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056465)
HIX0056465
HIT000114349_02 (
ENST00000295955
)
genome : 23,854,761 - 23,855,463 (703)
query : 34 - 736 (703/750)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.937
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056465)
HIX0056465
HIT000608517_05 (
ENST00000508595
)
genome : 23,854,761 - 23,855,392 (632)
query : 35 - 666 (632/667)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.948
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056465)
HIX0056465
HIT000516758_01 (
ENST00000418824
)
genome : 23,854,761 - 23,855,459 (699)
query : 1 - 640 (640/640)
2 exons
identity = 0.995
3'(1.000;0.993)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056465)
HIX0056465
HIT000606642_05 (
ENST00000506581
)
genome : 23,854,762 - 23,855,276 (515)
query : 1 - 371 (371/371)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056465)
HIX0056465
HIT000674989_02 (
ENST00000561773
)
genome : 23,854,792 - 23,855,459 (668)
query : 62 - 729 (668/729)
1 exon
identity = 0.952
3'(0.952)5'
coverage = 0.916
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056465)
HIX0056465
HIT000476850_04 (
ENST00000393394
)
genome : 23,854,804 - 23,855,459 (656)
query : 18 - 673 (656/673)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.975
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056465)
HIX0056465
HIT000713804_04 (
ENST00000602071
)
genome : 23,854,804 - 23,855,459 (656)
query : 18 - 673 (656/673)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.975
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056465)
HIX0056465
HIT000568883_05 (
ENST00000464118
)
genome : 23,854,816 - 23,855,437 (622)
query : 1 - 620 (620/620)
1 exon
identity = 0.953
3'(0.953)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056465)
HIX0056465
HIT000126966_03 (
ENST00000330965
)
genome : 23,854,859 - 23,855,438 (580)
query : 1 - 580 (580/580)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056465)
HIX0056465
HIT000571151_05 (
ENST00000466501
)
genome : 23,854,859 - 23,855,437 (579)
query : 1 - 579 (579/579)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056465)
HIX0056465
HIT000571658_05 (
ENST00000467036
)
genome : 23,854,859 - 23,855,437 (579)
query : 1 - 579 (579/579)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056465)
HIX0056465
HIT000593163_03 (
ENST00000489563
)
genome : 23,854,859 - 23,855,436 (578)
query : 2 - 579 (578/579)
1 exon
identity = 0.962
3'(0.962)5'
coverage = 0.998
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056465)
HIX0056465
HIT000603351_04 (
ENST00000503040
)
genome : 23,854,878 - 23,855,463 (586)
query : 1 - 571 (571/571)
1 exon
identity = 0.971
3'(0.971)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056465)
HIX0056465
HIT000101228_06
(
D28399
)
genome : 23,855,432 - 23,855,463 (32)
query : 1 - 32 (32/32)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056465)
HIX0020344
HIT000430731
(
AK311865
)
genome : 23,858,459 - 23,926,012 (67,554)
query : 1 - 790 (790/790)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020344)
HIX0016705
HIT000360491 (
ENST00000379211
)
genome : 23,925,918 - 23,957,624 (31,707)
query : 1 - 1,752 (1,752/1,752)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016705)
HIX0016705
HIT000014779
(
AK058173
)
genome : 23,926,123 - 23,957,624 (31,502)
query : 1 - 1,547 (1,547/1,547)
9 exons
identity = 0.999
5'(0.997;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016705)
HIX0016705
HIT000214010 (
NM_152761
)
genome : 23,926,123 - 23,957,624 (31,502)
query : 1 - 1,547 (1,547/1,547)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016705)
HIX0016705
HIT000654607 (
NM_001169574
)
genome : 23,926,123 - 23,957,624 (31,502)
query : 1 - 1,541 (1,541/1,541)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016705)
HIX0016705
HIT000387634
(
BC117344
)
genome : 23,926,211 - 23,957,518 (31,308)
query : 1 - 1,353 (1,353/1,353)
9 exons
identity = 0.999
5'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016705)
HIX0016705
HIT000387636
(
BC117346
)
genome : 23,926,211 - 23,957,518 (31,308)
query : 1 - 1,353 (1,353/1,353)
9 exons
identity = 0.999
5'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016705)
HIX0016705
HIT000502446
(
BC144007
)
genome : 23,926,211 - 23,957,518 (31,308)
query : 1 - 1,347 (1,347/1,347)
9 exons
identity = 0.999
5'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016705)
HIX0016705
HIT000533641 (
ENST00000435707
)
genome : 23,928,500 - 23,934,618 (6,119)
query : 1 - 516 (516/516)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016705)
HIX0016704
HIT000029043
(
AL834313
)
genome : 24,001,840 - 24,006,593 (4,754)
query : 1 - 4,754 (4,754/4,860)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016704)
HIX0016704
HIT000366907 (
NM_030624
)
genome : 24,001,833 - 24,045,303 (43,471)
query : 1 - 6,276 (6,276/6,290)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016704)
HIX0016704
HIT000125335 (
ENST00000328046
)
genome : 24,001,837 - 24,045,303 (43,467)
query : 1 - 6,272 (6,272/6,272)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016704)
HIX0016704
HIT000001393
(
AB051464
)
genome : 24,001,841 - 24,024,563 (22,723)
query : 1 - 5,765 (5,765/5,765)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016704)
HIX0016704
HIT000088665
(
BC015415
)
genome : 24,005,528 - 24,006,332 (805)
query : 1 - 805 (805/819)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016704)
HIX0016704
HIT000013912
(
AK057298
)
genome : 24,005,963 - 24,045,303 (39,341)
query : 1 - 2,146 (2,146/2,146)
4 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016704)
HIX0016704
HIT000339227
(
BC109058
)
genome : 24,006,038 - 24,024,810 (18,773)
query : 1 - 1,815 (1,815/1,815)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016704)
HIX0016704
HIT000339228
(
BC109059
)
genome : 24,006,038 - 24,024,810 (18,773)
query : 1 - 1,815 (1,815/1,815)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016704)
HIX0260778
HIT000590794 (
ENST00000487075
)
genome : 24,073,063 - 24,080,743 (7,681)
query : 1 - 367 (367/367)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260778)
HIX0260778
HIT000521002 (
ENST00000423068
)
genome : 24,073,088 - 24,078,596 (5,509)
query : 1 - 773 (773/773)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260778)
HIX0260734
HIT000087740
(
BC011945
)
genome : 24,089,716 - 24,096,087 (6,372)
query : 1 - 1,551 (1,551/1,602)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260734)
HIX0260734
HIT000564976 (
ENST00000460032
)
genome : 24,091,206 - 24,091,645 (440)
query : 14 - 453 (440/453)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.971
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260734)
HIX0260734
HIT000555266 (
ENST00000457332
)
genome : 24,091,379 - 24,095,525 (4,147)
query : 1 - 215 (215/215)
2 exons
identity = 0.981
5'(0.987;0.967)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260734)
HIX0260820
HIT000075889
(
AF274932
)
genome : 24,096,518 - 24,096,918 (401)
query : 1 - 401 (401/433)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 0.990
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260820)
HIX0016703
HIT000002402
(
AF251292
)
genome : 23,801,290 - 23,804,326 (3,037)
query : 26 - 1,082 (1,057/1,107)
6 exons
identity = 0.972
5'(0.996;1.000;0.990;0.837;1.000;0.975)3'
coverage = 0.977
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016703)
HIX0016703
HIT000199841 (
NM_002970
)
genome : 23,801,275 - 23,804,326 (3,052)
query : 1 - 1,063 (1,063/1,089)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016703)
HIX0016703
HIT000563640 (
NR_027783
)
genome : 23,801,275 - 23,804,326 (3,052)
query : 1 - 1,173 (1,173/1,199)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016703)
HIX0016703
HIT000033783
(
BC008424
)
genome : 23,801,290 - 23,804,323 (3,034)
query : 1 - 1,045 (1,045/1,077)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016703)
HIX0016703
HIT000360550 (
ENST00000379270
)
genome : 23,801,290 - 23,804,343 (3,054)
query : 1 - 1,065 (1,065/1,065)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016703)
HIX0016703
HIT000360534 (
ENST00000379254
)
genome : 23,801,290 - 23,804,230 (2,941)
query : 1 - 868 (868/868)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016703)
HIX0016703
HIT000431028
(
AK312162
)
genome : 23,801,292 - 23,803,973 (2,682)
query : 1 - 693 (693/693)
6 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016703)
HIX0016703
HIT000196404
(
M77693
)
genome : 23,801,304 - 23,804,326 (3,023)
query : 1 - 1,034 (1,034/1,060)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016703)
HIX0016703
HIT000024133
(
AL050290
)
genome : 23,801,314 - 23,804,326 (3,013)
query : 1 - 1,134 (1,134/1,157)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016703)
HIX0016703
HIT000030946
(
BC002503
)
genome : 23,801,314 - 23,804,326 (3,013)
query : 1 - 1,024 (1,024/1,041)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016703)
HIX0016703
HIT000592999 (
ENST00000489394
)
genome : 23,801,314 - 23,804,327 (3,014)
query : 1 - 1,135 (1,135/1,135)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016703)
HIX0016703
HIT000568040 (
ENST00000463236
)
genome : 23,801,454 - 23,804,226 (2,773)
query : 1 - 735 (735/735)
5 exons
identity = 0.976
5'(1.000;0.814;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016703)
HIX0016703
HIT000332415
(
AY841998
)
genome : 23,801,468 - 23,803,988 (2,521)
query : 1 - 642 (642/642)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016703)
HIX0016703
HIT000099745
(
BT006825
)
genome : 23,801,469 - 23,803,971 (2,503)
query : 1 - 514 (514/516)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016703)
HIX0016703
HIT000267203
(
CR450294
)
genome : 23,801,469 - 23,803,970 (2,502)
query : 1 - 513 (513/513)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016703)
HIX0203303
HIT000106419 (
ENST00000253039
)
genome : 24,072,833 - 24,096,088 (23,256)
query : 1 - 2,858 (2,858/2,858)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203303)
HIX0203303
HIT000198393 (
NM_001415
)
genome : 24,073,065 - 24,096,926 (23,862)
query : 1 - 3,464 (3,464/3,486)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203303)
HIX0203303
HIT000038713
(
BC019906
)
genome : 24,073,065 - 24,096,087 (23,023)
query : 1 - 2,619 (2,619/2,646)
12 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203303)
HIX0203303
HIT000423194
(
AK290397
)
genome : 24,073,073 - 24,095,079 (22,007)
query : 1 - 1,608 (1,608/1,608)
12 exons
identity = 0.998
5'(1.000;0.969;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203303)
HIX0203303
HIT000330357
(
AK222577
)
genome : 24,073,073 - 24,095,039 (21,967)
query : 1 - 1,569 (1,569/1,569)
12 exons
identity = 0.998
5'(1.000;0.984;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.988;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203303)
HIX0203303
HIT000431113
(
AK312247
)
genome : 24,073,073 - 24,094,902 (21,830)
query : 1 - 1,432 (1,432/1,432)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203303)
HIX0203303
HIT000192325
(
L19161
)
genome : 24,073,086 - 24,094,923 (21,838)
query : 1 - 1,440 (1,440/1,440)
12 exons
identity = 0.999
5'(1.000;0.984;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203303)
HIX0203303
HIT000487443
(
AB451230
)
genome : 24,073,086 - 24,094,900 (21,815)
query : 1 - 1,417 (1,417/1,419)
12 exons
identity = 0.999
5'(1.000;0.984;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203303)
HIX0203303
HIT000487566
(
AB451353
)
genome : 24,073,086 - 24,094,899 (21,814)
query : 1 - 1,416 (1,416/1,416)
12 exons
identity = 0.999
5'(1.000;0.984;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203303)
HIX0199470
pHIT000037721 ( pHIT000037721 )
genome : 23,093,875 - 23,155,096 (61,222)
query : 1 - 735 (735/735)
2 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199470)
CAGE tag :
H22BA10C0508,H22BA41A1206,H22BB50F1909
AC092832.7
22500001-22669689 F -
NCBI
AC108686.3
22669690-22742857 F +
NCBI
AC004470.2
22742858-22949666 F -
NCBI
AC135368.2
22949667-22982144 F -
NCBI
AC117517.7
22982145-23101767 F -
NCBI
AC004673.1
23101768-23335999 F +
NCBI
AC073910.20
23336000-23478889 F -
NCBI
AC096507.7
23478890-23581389 F -
NCBI
AC093011.3
23581390-23727927 F -
NCBI
AC131011.5
23727928-23900042 F -
NCBI
AC079376.26
23900043-24044473 F -
NCBI
AC079169.32
24044474-24100000 F -
NCBI