bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0016865
HIT000040880
(
BC029799
)
Representative transcript
(Doublesex- and mab-3-related transcription factor C1;)
genome : 71,996,833 - 72,068,636 (71,804)
query : 1 - 1,524 (1,524/1,575)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR026607 : DMRT/protein doublesex/protein male abnormal 3
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 10.8333, cyto 10.5, mito 9.5, cyto_nucl 8.5,
cyto_pero 7.5, extr 6, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK014934
Rattus
sp. (Rat) : XM_001055549
Pan
sp. (Chimpanzee) : XM_001140313
HIX0016865
HIT000576964 (
ENST00000472595
)
(Doublesex- and mab-3-related transcription factor C1;)
genome : 71,996,833 - 72,068,636 (71,804)
query : 1 - 1,524 (1,524/1,524)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 10.8333, cyto 10.5, mito 9.5, cyto_nucl 8.5,
cyto_pero 7.5, extr 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000712208 (
ENST00000600465
)
(Doublesex- and mab-3-related transcription factor C1;)
genome : 71,996,833 - 72,068,636 (71,804)
query : 1 - 1,524 (1,524/1,524)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 10.8333, cyto 10.5, mito 9.5, cyto_nucl 8.5,
cyto_pero 7.5, extr 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000128714_03 (
ENST00000334036
)
(Doublesex- and mab-3-related transcription factor C1;)
genome : 71,996,972 - 72,068,632 (71,661)
query : 1 - 1,197 (1,197/1,197)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, cyto 7.5, cyto_pero 6,
nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000709018_01 (
ENST00000597238
)
(Doublesex- and mab-3-related transcription factor C1;)
genome : 71,996,972 - 72,068,632 (71,661)
query : 1 - 1,197 (1,197/1,197)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, cyto 7.5, cyto_pero 6,
nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0176591
HIT000659253_01 (
NR_034116
)
(Hypothetical protein.)
genome : 72,001,689 - 72,002,484 (796)
query : 1 - 465 (465/471)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176591)
HIX0176591
HIT000354807_03 (
ENST00000373527
)
(Hypothetical protein.)
genome : 72,001,689 - 72,002,484 (796)
query : 1 - 453 (453/453)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176591)
HIX0176591
HIT000543371_01 (
ENST00000445437
)
(Hypothetical protein.)
genome : 72,001,689 - 72,002,484 (796)
query : 1 - 453 (453/453)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176591)
HIX0176591
HIT000705473_01 (
ENST00000593662
)
(Hypothetical protein.)
genome : 72,001,689 - 72,002,484 (796)
query : 1 - 453 (453/453)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176591)
HIX0176591
HIT000511392_01 (
ENST00000413458
)
(Hypothetical protein.)
genome : 72,001,689 - 72,002,454 (766)
query : 1 - 435 (435/435)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176591)
HIX0176591
HIT000708323_01 (
ENST00000596535
)
(Hypothetical protein.)
genome : 72,001,689 - 72,002,454 (766)
query : 1 - 435 (435/435)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176591)
HIX0176591
HIT000354804_05 (
ENST00000373524
)
(Hypothetical protein.)
genome : 72,001,707 - 72,002,418 (712)
query : 1 - 381 (381/381)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176591)
HIX0176657
HIT000556104_01 (
ENST00000458170
)
(Hypothetical protein.)
genome : 72,027,259 - 72,028,044 (786)
query : 1 - 451 (451/451)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176657)
HIX0176657
HIT000708657_01 (
ENST00000596874
)
(Hypothetical protein.)
genome : 72,027,259 - 72,028,044 (786)
query : 1 - 451 (451/451)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176657)
HIX0260846
HIT000517729_01 (
ENST00000419795
)
(Hypothetical protein.)
genome : 72,027,259 - 72,028,014 (756)
query : 1 - 433 (433/433)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260846)
HIX0176657
HIT000706706_01 (
ENST00000594906
)
(Hypothetical protein.)
genome : 72,027,259 - 72,028,014 (756)
query : 1 - 433 (433/433)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176657)
HIX0016865
HIT000712671_01 (
ENST00000600929
)
(Doublesex- and mab-3-related transcription factor C1.)
genome : 72,062,617 - 72,066,763 (4,147)
query : 1 - 458 (458/458)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 10, cyto_mito 10,
cyto_pero 7.66667, mito 7.5, extr 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0260850
HIT000538181_01 (
ENST00000440247
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,062,617 - 72,066,763 (4,147)
query : 1 - 458 (458/458)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 10, cyto_mito 10,
cyto_pero 7.66667, mito 7.5, extr 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260850)
HIX0016865
HIT000098682_03
(
BC047596
)
(Doublesex- and mab-3-related transcription factor C1.)
genome : 72,062,800 - 72,068,631 (5,832)
query : 1 - 1,043 (1,043/1,058)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR026607 : DMRT/protein doublesex/protein male abnormal 3
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.66667, cyto 8, cyto_pero 6.83333,
nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000354810_03 (
ENST00000373530
)
(Doublesex- and mab-3-related transcription factor C1.)
genome : 72,062,800 - 72,068,632 (5,833)
query : 1 - 1,044 (1,044/1,044)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.66667, cyto 8, cyto_pero 6.83333,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000708177_01 (
ENST00000596389
)
(Doublesex- and mab-3-related transcription factor C1.)
genome : 72,062,800 - 72,068,628 (5,829)
query : 1 - 1,040 (1,040/1,040)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.66667, cyto 8, cyto_pero 6.83333,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000354813_03 (
ENST00000373533
)
(Doublesex- and mab-3-related transcription factor C1.)
genome : 72,062,802 - 72,068,632 (5,831)
query : 1 - 1,042 (1,042/1,042)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.66667, cyto 8, cyto_pero 6.83333,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000707825_01 (
ENST00000596035
)
(Doublesex- and mab-3-related transcription factor C1.)
genome : 72,062,802 - 72,068,632 (5,831)
query : 1 - 1,042 (1,042/1,042)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.66667, cyto 8, cyto_pero 6.83333,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000354809_03 (
ENST00000373529
)
(Doublesex- and mab-3-related transcription factor C1;)
genome : 72,064,690 - 72,068,632 (3,943)
query : 1 - 1,282 (1,282/1,282)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, cyto 7.5, cyto_pero 6,
nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000246561_03
(
AJ291670
)
(Doublesex- and mab-3-related transcription factor C1.)
genome : 72,064,690 - 72,065,774 (1,085)
query : 1 - 472 (472/472)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 7, nucl 5.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000536630_01 (
ENST00000438696
)
(Doublesex- and mab-3-related transcription factor C1.)
genome : 72,064,690 - 72,065,774 (1,085)
query : 1 - 472 (472/472)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 7, nucl 5.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000707777_01 (
ENST00000595986
)
(Doublesex- and mab-3-related transcription factor C1.)
genome : 72,064,690 - 72,065,774 (1,085)
query : 1 - 472 (472/472)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 7, nucl 5.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000317666_03 (
NM_033053
)
(Doublesex- and mab-3-related transcription factor C1;)
genome : 72,064,876 - 72,068,636 (3,761)
query : 1 - 1,100 (1,100/1,120)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, cyto 7.5, cyto_pero 6,
nucl 4.5, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000113243_03 (
ENST00000290273
)
(Doublesex- and mab-3-related transcription factor C1.)
genome : 72,064,876 - 72,068,636 (3,761)
query : 1 - 905 (905/905)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.66667, cyto 8, cyto_pero 6.83333,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000128576_03 (
ENST00000333826
)
(Doublesex- and mab-3-related transcription factor C1.)
genome : 72,064,876 - 72,068,636 (3,761)
query : 1 - 905 (905/905)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.66667, cyto 8, cyto_pero 6.83333,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000354812_03 (
ENST00000373532
)
(Doublesex- and mab-3-related transcription factor C1;)
genome : 72,064,876 - 72,068,636 (3,761)
query : 1 - 1,100 (1,100/1,100)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, cyto 7.5, cyto_pero 6,
nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000398163_03 (
NM_001080851
)
(Doublesex- and mab-3-related transcription factor C1;)
genome : 72,064,876 - 72,068,636 (3,761)
query : 1 - 1,100 (1,100/1,100)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, cyto 7.5, cyto_pero 6,
nucl 4.5, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000706377_01 (
ENST00000594574
)
(Doublesex- and mab-3-related transcription factor C1;)
genome : 72,064,876 - 72,068,636 (3,761)
query : 1 - 1,100 (1,100/1,100)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, cyto 7.5, cyto_pero 6,
nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000707205_01 (
ENST00000595412
)
(Doublesex- and mab-3-related transcription factor C1;)
genome : 72,064,876 - 72,068,636 (3,761)
query : 1 - 1,100 (1,100/1,100)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, cyto 7.5, cyto_pero 6,
nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000713455_01 (
ENST00000601718
)
(Doublesex- and mab-3-related transcription factor C1.)
genome : 72,064,876 - 72,068,636 (3,761)
query : 1 - 905 (905/905)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.66667, cyto 8, cyto_pero 6.83333,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000585095_01 (
ENST00000481112
)
(Doublesex- and mab-3-related transcription factor C1.)
genome : 72,064,973 - 72,068,307 (3,335)
query : 1 - 613 (613/613)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 5.66667, nucl 4.5, extr 4,
cyto_pero 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0016865
HIT000705577_01 (
ENST00000593766
)
(Doublesex- and mab-3-related transcription factor C1.)
genome : 72,064,973 - 72,068,307 (3,335)
query : 1 - 613 (613/613)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 5.66667, nucl 4.5, extr 4,
cyto_pero 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016865)
HIX0176547
HIT000317666_04 (
NM_033053
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,091,859 - 72,095,622 (3,764)
query : 1 - 1,100 (1,100/1,120)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, cyto 7.5, cyto_pero 6,
nucl 4.5, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000098682_04
(
BC047596
)
Representative transcript
(Doublesex- and mab-3-related transcription factor C1.)
genome : 72,091,864 - 72,097,698 (5,835)
query : 1 - 1,043 (1,043/1,058)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026607 : DMRT/protein doublesex/protein male abnormal 3
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.66667, cyto 8, cyto_pero 6.83333,
nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000023877
Pan
sp. (Chimpanzee) : XM_001140313
Equus
sp. (Horse) : XM_001915469
HIX0176547
HIT000587688 (
ENST00000483816
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,091,859 - 72,163,653 (71,795)
query : 1 - 1,524 (1,524/1,524)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 10.8333, cyto 10.5, mito 9.5, cyto_nucl 8.5,
cyto_pero 7.5, extr 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000113243_04 (
ENST00000290273
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,091,859 - 72,095,622 (3,764)
query : 1 - 905 (905/905)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.66667, cyto 8, cyto_pero 6.83333,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000128576_04 (
ENST00000333826
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,091,859 - 72,095,622 (3,764)
query : 1 - 905 (905/905)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.66667, cyto 8, cyto_pero 6.83333,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000354812_04 (
ENST00000373532
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,091,859 - 72,095,622 (3,764)
query : 1 - 1,100 (1,100/1,100)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, cyto 7.5, cyto_pero 6,
nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000398163_04 (
NM_001080851
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,091,859 - 72,095,622 (3,764)
query : 1 - 1,100 (1,100/1,100)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, cyto 7.5, cyto_pero 6,
nucl 4.5, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000706377_02 (
ENST00000594574
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,091,859 - 72,095,622 (3,764)
query : 1 - 1,100 (1,100/1,100)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, cyto 7.5, cyto_pero 6,
nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000707205_02 (
ENST00000595412
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,091,859 - 72,095,622 (3,764)
query : 1 - 1,100 (1,100/1,100)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, cyto 7.5, cyto_pero 6,
nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000713455_02 (
ENST00000601718
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,091,859 - 72,095,622 (3,764)
query : 1 - 905 (905/905)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.66667, cyto 8, cyto_pero 6.83333,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000128714_04 (
ENST00000334036
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,091,863 - 72,163,514 (71,652)
query : 1 - 1,197 (1,197/1,197)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, cyto 7.5, cyto_pero 6,
nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000709018_02 (
ENST00000597238
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,091,863 - 72,163,514 (71,652)
query : 1 - 1,197 (1,197/1,197)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, cyto 7.5, cyto_pero 6,
nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000354810_04 (
ENST00000373530
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,091,863 - 72,097,698 (5,836)
query : 1 - 1,044 (1,044/1,044)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.66667, cyto 8, cyto_pero 6.83333,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000354813_04 (
ENST00000373533
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,091,863 - 72,097,696 (5,834)
query : 1 - 1,042 (1,042/1,042)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.66667, cyto 8, cyto_pero 6.83333,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000707825_02 (
ENST00000596035
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,091,863 - 72,097,696 (5,834)
query : 1 - 1,042 (1,042/1,042)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.66667, cyto 8, cyto_pero 6.83333,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000354809_04 (
ENST00000373529
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,091,863 - 72,095,808 (3,946)
query : 1 - 1,282 (1,282/1,282)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, cyto 7.5, cyto_pero 6,
nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000708177_02 (
ENST00000596389
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,091,867 - 72,097,698 (5,832)
query : 1 - 1,040 (1,040/1,040)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.66667, cyto 8, cyto_pero 6.83333,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000585095_02 (
ENST00000481112
)
(Hypothetical protein.)
genome : 72,092,188 - 72,095,525 (3,338)
query : 1 - 613 (613/613)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 5.66667, nucl 4.5, extr 4,
cyto_pero 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000705577_02 (
ENST00000593766
)
(Hypothetical protein.)
genome : 72,092,188 - 72,095,525 (3,338)
query : 1 - 613 (613/613)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 5.66667, nucl 4.5, extr 4,
cyto_pero 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0260851
HIT000538181_02 (
ENST00000440247
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,093,732 - 72,097,881 (4,150)
query : 1 - 458 (458/458)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 10, cyto_mito 10,
cyto_pero 7.66667, mito 7.5, extr 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260851)
HIX0176547
HIT000712671_02 (
ENST00000600929
)
(DMRT/protein doublesex/protein male abnormal 3 family protein.)
genome : 72,093,732 - 72,097,881 (4,150)
query : 1 - 458 (458/458)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 10, cyto_mito 10,
cyto_pero 7.66667, mito 7.5, extr 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000246561_04
(
AJ291670
)
(Doublesex- and mab-3-related transcription factor C1.)
genome : 72,094,724 - 72,095,808 (1,085)
query : 1 - 472 (472/472)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 7, nucl 5.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000536630_02 (
ENST00000438696
)
(Hypothetical protein.)
genome : 72,094,724 - 72,095,808 (1,085)
query : 1 - 472 (472/472)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 7, nucl 5.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176547
HIT000707777_02 (
ENST00000595986
)
(Hypothetical protein.)
genome : 72,094,724 - 72,095,808 (1,085)
query : 1 - 472 (472/472)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 7, nucl 5.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0176658
HIT000556104_02 (
ENST00000458170
)
(Hypothetical protein.)
genome : 72,132,453 - 72,133,238 (786)
query : 1 - 451 (451/451)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176658)
HIX0176658
HIT000708657_02 (
ENST00000596874
)
(Hypothetical protein.)
genome : 72,132,453 - 72,133,238 (786)
query : 1 - 451 (451/451)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176658)
HIX0176658
HIT000706706_02 (
ENST00000594906
)
(Hypothetical protein.)
genome : 72,132,483 - 72,133,238 (756)
query : 1 - 433 (433/433)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176658)
HIX0260847
HIT000517729_02 (
ENST00000419795
)
(Hypothetical protein.)
genome : 72,132,483 - 72,133,238 (756)
query : 1 - 433 (433/433)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260847)
HIX0176592
HIT000659253_02 (
NR_034116
)
(Hypothetical protein.)
genome : 72,158,003 - 72,158,798 (796)
query : 1 - 465 (465/471)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176592)
HIX0176592
HIT000354807_04 (
ENST00000373527
)
(Hypothetical protein.)
genome : 72,158,003 - 72,158,798 (796)
query : 1 - 453 (453/453)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176592)
HIX0176592
HIT000543371_02 (
ENST00000445437
)
(Hypothetical protein.)
genome : 72,158,003 - 72,158,798 (796)
query : 1 - 453 (453/453)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176592)
HIX0176592
HIT000705473_02 (
ENST00000593662
)
(Hypothetical protein.)
genome : 72,158,003 - 72,158,798 (796)
query : 1 - 453 (453/453)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176592)
HIX0176592
HIT000511392_02 (
ENST00000413458
)
(Hypothetical protein.)
genome : 72,158,033 - 72,158,798 (766)
query : 1 - 435 (435/435)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176592)
HIX0176592
HIT000708323_02 (
ENST00000596535
)
(Hypothetical protein.)
genome : 72,158,033 - 72,158,798 (766)
query : 1 - 435 (435/435)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176592)
HIX0176592
HIT000354804_06 (
ENST00000373524
)
(Hypothetical protein.)
genome : 72,158,069 - 72,158,780 (712)
query : 1 - 381 (381/381)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176592)
HIX0176547
HIT000052635_03
(
BC041962
)
(MAGE homology domain containing protein.)
genome : 72,161,568 - 72,163,517 (1,950)
query : 1 - 1,950 (1,950/1,965)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
InterPro :
IPR002190 : MAGE homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK077703
Pan
sp. (Chimpanzee) : ENSPTRT00000054973
HIX0176547
HIT000562839 (
NR_026595
)
(MAGE homology domain containing protein.)
genome : 72,161,568 - 72,163,589 (2,022)
query : 1 - 2,022 (2,022/2,022)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176547)
HIX0260775
HIT000514923_01 (
ENST00000416989
)
(Hypothetical protein.)
genome : 72,218,227 - 72,222,695 (4,469)
query : 1 - 1,167 (1,167/1,167)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 8.5, extr 8, cyto 8, cyto_pero 7.5, mito 6,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260775)
HIX0260775
HIT000705974_01 (
ENST00000594167
)
(Hypothetical protein.)
genome : 72,218,227 - 72,222,695 (4,469)
query : 1 - 1,167 (1,167/1,167)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 8.5, extr 8, cyto 8, cyto_pero 7.5, mito 6,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260775)
HIX0260775
HIT000712489_01 (
ENST00000600747
)
(Hypothetical protein.)
genome : 72,218,227 - 72,222,695 (4,469)
query : 1 - 1,167 (1,167/1,167)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 8.5, extr 8, cyto 8, cyto_pero 7.5, mito 6,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260775)
HIX0176651
HIT000552322_01 (
ENST00000454388
)
(Hypothetical protein.)
genome : 72,218,227 - 72,222,695 (4,469)
query : 1 - 1,167 (1,167/1,167)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 8.5, extr 8, cyto 8, cyto_pero 7.5, mito 6,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176651)
HIX0056425
HIT000096994
(
BC041956
)
(Polyadenylate-binding protein 4; PABP-4; Poly(A)-binding protein 4; Activated-platelet protein 1; APP-1; Inducible poly(A)-binding protein; iPABP;)
genome : 72,223,356 - 72,225,552 (2,197)
query : 5 - 2,201 (2,197/2,223)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.995
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056425)
HIX0056425
HIT000354801 (
ENST00000373521
)
(Polyadenylate-binding protein 4; PABP-4; Poly(A)-binding protein 4; Activated-platelet protein 1; APP-1; Inducible poly(A)-binding protein; iPABP;)
genome : 72,223,352 - 72,225,551 (2,200)
query : 1 - 2,200 (2,200/2,200)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056425)
HIX0056425
HIT000397556 (
NM_001042506
)
(Polyadenylate-binding protein 4; PABP-4; Poly(A)-binding protein 4; Activated-platelet protein 1; APP-1; Inducible poly(A)-binding protein; iPABP;)
genome : 72,223,352 - 72,225,551 (2,200)
query : 1 - 2,200 (2,200/2,200)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056425)
HIX0056425
HIT000711966 (
ENST00000600221
)
(Polyadenylate-binding protein 4; PABP-4; Poly(A)-binding protein 4; Activated-platelet protein 1; APP-1; Inducible poly(A)-binding protein; iPABP;)
genome : 72,223,352 - 72,225,551 (2,200)
query : 1 - 2,200 (2,200/2,200)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056425)
HIX0056425
HIT000500508
(
BC136492
)
Representative transcript
(Polyadenylate-binding protein 4; PABP-4; Poly(A)-binding protein 4; Activated-platelet protein 1; APP-1; Inducible poly(A)-binding protein; iPABP;)
genome : 72,223,449 - 72,224,594 (1,146)
query : 1 - 1,072 (1,072/1,072)
2 exons
identity = 0.992
5'(1.000;0.979)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056425)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC099992
Mus
sp. (Mouse) : XM_141989
Rattus
sp. (Rat) : XM_228576
Macaca
sp. (Macaque) : XR_011509
HIX0056425
HIT000637433 (
ENST00000538388
)
(Polyadenylate-binding protein 4; PABP-4; Poly(A)-binding protein 4; Activated-platelet protein 1; APP-1; Inducible poly(A)-binding protein; iPABP;)
genome : 72,223,449 - 72,224,594 (1,146)
query : 1 - 1,076 (1,076/1,076)
2 exons
identity = 0.995
5'(1.000;0.988)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056425)
HIX0056425
HIT000710914 (
ENST00000599154
)
(Polyadenylate-binding protein 4; PABP-4; Poly(A)-binding protein 4; Activated-platelet protein 1; APP-1; Inducible poly(A)-binding protein; iPABP;)
genome : 72,223,449 - 72,224,594 (1,146)
query : 1 - 1,076 (1,076/1,076)
2 exons
identity = 0.995
5'(1.000;0.988)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056425)
HIX0077138
HIT000354799 (
ENST00000373519
)
(RNA recognition motif domain containing protein.)
genome : 72,297,115 - 72,299,351 (2,237)
query : 1 - 2,237 (2,237/2,237)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077138)
HIX0077138
HIT000710787 (
ENST00000599024
)
(RNA recognition motif domain containing protein.)
genome : 72,297,115 - 72,299,351 (2,237)
query : 1 - 2,237 (2,237/2,237)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077138)
HIX0077213
HIT000332221
(
AY730282
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,297,177 - 72,297,752 (576)
query : 17 - 590 (574/590)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 0.973
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.5, cyto 8, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077213)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001140710
HIX0077138
HIT000365203 (
NM_001012977
)
(RNA recognition motif domain containing protein.)
genome : 72,297,177 - 72,299,351 (2,175)
query : 1 - 2,175 (2,175/2,175)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077138)
HIX0077138
HIT000551323 (
ENST00000453389
)
(RNA recognition motif domain containing protein.)
genome : 72,298,113 - 72,299,258 (1,146)
query : 1 - 1,076 (1,076/1,076)
2 exons
identity = 0.995
3'(1.000;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077138)
HIX0077138
HIT000713113 (
ENST00000601374
)
(RNA recognition motif domain containing protein.)
genome : 72,298,113 - 72,299,258 (1,146)
query : 1 - 1,076 (1,076/1,076)
2 exons
identity = 0.995
3'(1.000;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077138)
HIX0176652
HIT000552322_02 (
ENST00000454388
)
(Hypothetical protein.)
genome : 72,300,006 - 72,304,474 (4,469)
query : 1 - 1,167 (1,167/1,167)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 8.5, extr 8, cyto 8, cyto_pero 7.5, mito 6,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176652)
HIX0260776
HIT000514923_02 (
ENST00000416989
)
(Hypothetical protein.)
genome : 72,300,006 - 72,304,474 (4,469)
query : 1 - 1,167 (1,167/1,167)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 8.5, extr 8, cyto 8, cyto_pero 7.5, mito 6,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260776)
HIX0260776
HIT000705974_02 (
ENST00000594167
)
(Hypothetical protein.)
genome : 72,300,006 - 72,304,474 (4,469)
query : 1 - 1,167 (1,167/1,167)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 8.5, extr 8, cyto 8, cyto_pero 7.5, mito 6,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260776)
HIX0260776
HIT000712489_02 (
ENST00000600747
)
(Hypothetical protein.)
genome : 72,300,006 - 72,304,474 (4,469)
query : 1 - 1,167 (1,167/1,167)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 8.5, extr 8, cyto 8, cyto_pero 7.5, mito 6,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260776)
HIX0148383
HIT000467698
(
DQ601167
)
Representative transcript
(Non-protein coding transcript.)
genome : 72,345,751 - 72,345,781 (31)
query : 1 - 31 (31/31)
1 exon
identity = 0.968
5'(0.968)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148383)
HIX0020452
HIT000015782
(
AK090915
)
Representative transcript
(Nucleosome assembly protein 1-like 2.)
genome : 72,345,876 - 72,347,919 (2,044)
query : 1 - 2,047 (2,047/2,047)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 11.5, extr 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020452)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000023879
Pan
sp. (Chimpanzee) : XM_001140553
Pan
sp. (Chimpanzee) : XM_001141012
Bos
sp. (Cow) : XM_865402
Monodelphis
sp. (Opossum) : XR_030338
HIX0020452
HIT000354798 (
ENST00000373518
)
(Nucleosome assembly protein 1-like 2.)
genome : 72,345,876 - 72,347,919 (2,044)
query : 1 - 2,044 (2,044/2,044)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 12.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020452)
HIX0020452
HIT000563392 (
NR_027291
)
(Nucleosome assembly protein 1-like 2.)
genome : 72,345,876 - 72,347,919 (2,044)
query : 1 - 2,044 (2,044/2,044)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 12.5, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020452)
HIX0020452
HIT000706852 (
ENST00000595054
)
(Nucleosome assembly protein 1-like 4; Nucleosome assembly protein 2; NAP-2;)
genome : 72,345,876 - 72,347,919 (2,044)
query : 1 - 2,044 (2,044/2,044)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 12.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020452)
HIX0016872
HIT000040197
(
BC026325
)
(Nucleosome assembly protein 1-like 2.)
genome : 72,432,154 - 72,434,632 (2,479)
query : 1 - 2,479 (2,479/2,524)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 6.5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016872)
HIX0016872
HIT000208510 (
NM_021963
)
(Nucleosome assembly protein 1-like 2.)
genome : 72,432,138 - 72,434,710 (2,573)
query : 1 - 2,573 (2,573/2,590)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.8333, nucl 14.5, cyto 14,
cyto_mito 7.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016872)
HIX0016872
HIT000354797 (
ENST00000373517
)
(Nucleosome assembly protein 1-like 2.)
genome : 72,432,135 - 72,434,684 (2,550)
query : 1 - 2,550 (2,550/2,550)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.8333, nucl 14.5, cyto 14,
cyto_mito 7.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016872)
HIX0016872
HIT000058879
(
AB027013
)
Representative transcript
(Nucleosome assembly protein 1-like 2.)
genome : 72,432,170 - 72,434,684 (2,515)
query : 1 - 2,515 (2,515/2,515)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.8333, nucl 14.5, cyto 14,
cyto_mito 7.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016872)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : BC094525
Pongo
sp. (Orangutan) : ENSPPYT00000023880
Mus
sp. (Mouse) : X92352
Macaca
sp. (Macaque) : XM_001094812
Pan
sp. (Chimpanzee) : XM_001141012
Equus
sp. (Horse) : XM_001504966
Canis
sp. (Dog) : XM_549079
HIX0016872
HIT000242734
(
AF136178
)
(Nucleosome assembly protein 1-like 2.)
genome : 72,432,194 - 72,434,658 (2,465)
query : 1 - 2,465 (2,465/2,465)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.8333, nucl 14.5, cyto 14,
cyto_mito 7.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016872)
HIX0016872
HIT000498300
(
AK303676
)
(Nucleosome assembly protein 1-like 2.)
genome : 72,432,492 - 72,434,668 (2,177)
query : 1 - 1,812 (1,812/1,812)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 18, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016872)
HIX0016872
HIT000635683 (
ENST00000536638
)
(Nucleosome assembly protein 1-like 2.)
genome : 72,432,492 - 72,434,668 (2,177)
query : 1 - 1,812 (1,812/1,812)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 18, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016872)
HIX0016872
HIT000424094
(
AK291297
)
(Nucleosome assembly protein 1-like 2.)
genome : 72,432,836 - 72,434,668 (1,833)
query : 1 - 1,833 (1,833/1,833)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.8333, nucl 14.5, cyto 14,
cyto_mito 7.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016872)
HIX0016872
HIT000434780
(
AK316569
)
(Nucleosome assembly protein 1-like 2.)
genome : 72,432,946 - 72,434,710 (1,765)
query : 1 - 1,765 (1,765/1,765)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.8333, nucl 14.5, cyto 14,
cyto_mito 7.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016872)
HIX0016872
HIT000267945
(
CR457095
)
(Nucleosome assembly protein 1-like 2.)
genome : 72,432,947 - 72,434,328 (1,382)
query : 1 - 1,382 (1,382/1,383)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.999
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.8333, nucl 14.5, cyto 14,
cyto_mito 7.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016872)
HIX0177136
HIT000525795_01 (
ENST00000427861
)
(Protein import receptor MAS20 family protein.)
genome : 72,442,960 - 72,443,394 (435)
query : 1 - 435 (435/435)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.6667, cyto_plas 8.16667,
extr 6, mito 6, nucl 3.5, mito_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177136)
HIX0177046
HIT000519744 (
ENST00000421810
)
(Conserved hypothetical protein.)
genome : 72,457,483 - 72,458,545 (1,063)
query : 1 - 1,063 (1,063/1,063)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_plas 11.8333, cyto_nucl 11, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177046)
HIX0176637
HIT000534869 (
ENST00000436935
)
(14-3-3 protein family protein.)
genome : 72,494,621 - 72,495,351 (731)
query : 1 - 731 (731/731)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.5, mito 7, extr 4, nucl 3.5,
E.R._mito 3.5, mito_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176637)
HIX0056278
HIT000354794 (
ENST00000373514
)
(Homeobox protein CDX-4.)
genome : 72,667,088 - 72,675,081 (7,994)
query : 1 - 1,517 (1,517/1,517)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056278)
HIX0056278
HIT000201902 (
NM_005193
)
(Homeobox protein CDX-4.)
genome : 72,667,090 - 72,674,421 (7,332)
query : 1 - 855 (855/855)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056278)
HIX0056278
HIT000389759
(
BC128233
)
Representative transcript
(Homeobox protein CDX-4.)
genome : 72,667,090 - 72,674,421 (7,332)
query : 1 - 855 (855/855)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000047 : Helix-turn-helix motif
IPR006820 : Caudal-like activation domain
IPR017970 : Homeobox, conserved site
IPR020479 : Homeodomain, metazoa
GO :
0000976 : Molecular Function : transcription regulatory region sequence-specific DNA binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0007275 : Biological Process : multicellular organismal development
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056278)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AF353624
Danio
sp. (Zebrafish) : BC160643
Bos
sp. (Cow) : ENSBTAT00000002260
Oryzias
sp. (Medaka) : ENSORLT00000002442
Pongo
sp. (Orangutan) : ENSPPYT00000023882
Mus
sp. (Mouse) : L08061
Takifugu
sp. (Fugu) : SINFRUT00000139303
Rattus
sp. (Rat) : XM_001055316
Macaca
sp. (Macaque) : XM_001095271
Monodelphis
sp. (Opossum) : XM_001370133
Equus
sp. (Horse) : XM_001504968
Pan
sp. (Chimpanzee) : XM_529040
Canis
sp. (Dog) : XM_549080
HIX0177001
HIT000516705 (
ENST00000418771
)
(Conserved hypothetical protein.)
genome : 72,694,399 - 72,694,666 (268)
query : 1 - 268 (268/268)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 9, cyto_nucl 5, mito_pero 5, nucl 4.5,
cyto 4.5, E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177001)
HIX0016873
HIT000013149
(
AK056535
)
Representative transcript
(Dual specificity mitogen-activated protein kinase kinase 4; MAP kinase kinase 4; MAPKK 4; EC=2.7.12.2; JNK-activating kinase 1; MAPK/ERK kinase 4; MEK 4; SAPK/ERK kinase 1; SEK1; Stress-activated protein kinase kinase 1; SAPK kinase 1; SAPKK-1; SAPKK1; c-Jun N-terminal kinase kinase 1; JNKK;)
genome : 72,744,111 - 72,782,921 (38,811)
query : 1 - 2,539 (2,539/2,539)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.2
InterPro :
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 7, extr 6, cyto 6, E.R._mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016873)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173648
Danio
sp. (Zebrafish) : BC116561
Tetraodon
sp. (Tetraodon) : CR662739
Monodelphis
sp. (Opossum) : ENSMODT00000024871
Oryzias
sp. (Medaka) : ENSORLT00000001286
Pongo
sp. (Orangutan) : ENSPPYT00000009352
Takifugu
sp. (Fugu) : SINFRUT00000149303
HIX0016873
HIT000657925 (
NR_029423
)
(Dual specificity mitogen-activated protein kinase kinase 4; MAP kinase kinase 4; MAPKK 4; EC=2.7.12.2; JNK-activating kinase 1; MAPK/ERK kinase 4; MEK 4; SAPK/ERK kinase 1; SEK1; Stress-activated protein kinase kinase 1; SAPK kinase 1; SAPKK-1; SAPKK1; c-Jun N-terminal kinase kinase 1; JNKK;)
genome : 72,744,111 - 72,782,921 (38,811)
query : 1 - 2,539 (2,539/2,539)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 7, extr 6, cyto 6, E.R._mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016873)
HIX0016873
HIT000714317 (
ENST00000602584
)
(Dual specificity mitogen-activated protein kinase kinase 4; MAP kinase kinase 4; MAPKK 4; EC=2.7.12.2; JNK-activating kinase 1; MAPK/ERK kinase 4; MEK 4; SAPK/ERK kinase 1; SEK1; Stress-activated protein kinase kinase 1; SAPK kinase 1; SAPKK-1; SAPKK1; c-Jun N-terminal kinase kinase 1; JNKK;)
genome : 72,744,111 - 72,782,921 (38,811)
query : 1 - 2,539 (2,539/2,539)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 7, extr 6, cyto 6, E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016873)
HIX0016873
HIT000536387 (
ENST00000438453
)
(Dual specificity mitogen-activated protein kinase kinase 4; MAP kinase kinase 4; MAPKK 4; EC=2.7.12.2; JNK-activating kinase 1; MAPK/ERK kinase 4; MEK 4; SAPK/ERK kinase 1; SEK1; Stress-activated protein kinase kinase 1; SAPK kinase 1; SAPKK-1; SAPKK1; c-Jun N-terminal kinase kinase 1; JNKK;)
genome : 72,744,797 - 72,745,991 (1,195)
query : 1 - 1,195 (1,195/1,195)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 2.7.12.2
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 7, extr 6, cyto 6, E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016873)
HIX0177041
HIT000519179 (
ENST00000421245
)
(Conserved hypothetical protein.)
genome : 72,755,339 - 72,756,077 (739)
query : 1 - 739 (739/739)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15.5, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177041)
HIX0016874
HIT000490527
(
AK295903
)
(Cysteine-rich hydrophobic domain 1 protein.)
genome : 72,782,983 - 72,900,947 (117,965)
query : 3 - 857 (855/857)
5 exons
identity = 0.998
5'(0.998;1.000;0.994;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR019383 : Golgin subfamily A member 7/ERF4
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9, nucl 5, plas 4, mito 4, pero 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
HIX0016874
HIT000366568 (
NM_001039840
)
(Cysteine-rich hydrophobic domain 1 protein; Brain X-linked protein;)
genome : 72,782,984 - 72,906,937 (123,954)
query : 1 - 6,909 (6,909/6,909)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, plas 5, nucl 5, pero 4, E.R. 3, mito_nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
HIX0016874
HIT000306919
(
CR936642
)
(Cysteine-rich hydrophobic domain 1 protein; Brain X-linked protein;)
genome : 72,783,036 - 72,906,936 (123,901)
query : 4 - 6,799 (6,796/6,817)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019383 : Golgin subfamily A member 7/ERF4
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, plas 6, nucl 5, cyto_golg 5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
HIX0016874
HIT000354784 (
ENST00000373504
)
(Cysteine-rich hydrophobic domain 1 protein; Brain X-linked protein;)
genome : 72,783,036 - 72,906,937 (123,902)
query : 1 - 6,797 (6,797/6,797)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, plas 6, nucl 5, cyto_golg 5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
HIX0016874
HIT000354782 (
ENST00000373502
)
(Cysteine-rich hydrophobic domain 1 protein; Brain X-linked protein;)
genome : 72,783,044 - 72,904,246 (121,203)
query : 1 - 4,158 (4,158/4,158)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, plas 5, nucl 5, pero 4, E.R. 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
HIX0016874
HIT000389354
(
BC127727
)
(Cysteine-rich hydrophobic domain 1 protein; Brain X-linked protein;)
genome : 72,783,073 - 72,900,916 (117,844)
query : 1 - 739 (739/739)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019383 : Golgin subfamily A member 7/ERF4
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, plas 6, nucl 5, cyto_golg 5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
HIX0016874
HIT000389355
(
BC127728
)
(Cysteine-rich hydrophobic domain 1 protein; Brain X-linked protein;)
genome : 72,783,073 - 72,900,916 (117,844)
query : 1 - 799 (799/799)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019383 : Golgin subfamily A member 7/ERF4
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, plas 5, nucl 5, pero 4, E.R. 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
HIX0016874
HIT000500689
(
BC136691
)
Representative transcript
(Cysteine-rich hydrophobic domain 1 protein; Brain X-linked protein;)
genome : 72,783,079 - 72,903,224 (120,146)
query : 1 - 3,101 (3,101/3,101)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019383 : Golgin subfamily A member 7/ERF4
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, plas 5, nucl 5, pero 4, E.R. 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720660
Mus
sp. (Mouse) : AK034427
Danio
sp. (Zebrafish) : BC110112
Oryzias
sp. (Medaka) : ENSORLT00000002448
Pongo
sp. (Orangutan) : ENSPPYT00000023883
Takifugu
sp. (Fugu) : SINFRUT00000139304
Rattus
sp. (Rat) : XM_001055438
Macaca
sp. (Macaque) : XM_001095379
Monodelphis
sp. (Opossum) : XM_001370133
Equus
sp. (Horse) : XM_001504969
Pan
sp. (Chimpanzee) : XM_521135
Canis
sp. (Dog) : XM_844913
Bos
sp. (Cow) : XM_866769
HIX0016874
HIT000500690
(
BC136692
)
(Cysteine-rich hydrophobic domain 1 protein; Brain X-linked protein;)
genome : 72,783,079 - 72,903,224 (120,146)
query : 1 - 3,101 (3,101/3,101)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019383 : Golgin subfamily A member 7/ERF4
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, plas 5, nucl 5, pero 4, E.R. 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
HIX0016874
HIT000601631 (
ENST00000498407
)
(Cysteine-rich hydrophobic domain 1 protein; Brain X-linked protein;)
genome : 72,783,118 - 72,906,608 (123,491)
query : 1 - 967 (967/967)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, plas 5, nucl 5, pero 4, E.R. 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
HIX0016874
HIT000492392
(
AK297768
)
(Cysteine-rich hydrophobic domain 1 protein.)
genome : 72,783,127 - 72,901,014 (117,888)
query : 1 - 843 (843/843)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019383 : Golgin subfamily A member 7/ERF4
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8, plas 5.5, cyto_mito 5.5, pero 5, cyto_golg 5,
extr_plas 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
HIX0016874
HIT000099140
(
BC050300
)
(Cysteine-rich hydrophobic domain 1 protein.)
genome : 72,783,288 - 72,903,050 (119,763)
query : 3 - 2,802 (2,800/2,827)
7 exons
identity = 1.000
5'(1.000;0.982;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
HIX0016874
HIT000601544 (
ENST00000498318
)
(Cysteine-rich hydrophobic domain 1 protein.)
genome : 72,783,288 - 72,903,050 (119,763)
query : 1 - 2,800 (2,800/2,800)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
HIX0016874
HIT000027007
(
AL832095
)
(Cysteine-rich hydrophobic domain 1 protein.)
genome : 72,783,345 - 72,904,245 (120,901)
query : 2 - 3,857 (3,856/3,915)
6 exons
identity = 0.999
5'(1.000;0.982;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR019383 : Golgin subfamily A member 7/ERF4
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 22, extr 6, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
HIX0148076
HIT000438306
(
DQ571775
)
Representative transcript
(Non-protein coding transcript.)
genome : 72,879,264 - 72,879,292 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148076)
HIX0016874
HIT000325680
(
Y11897
)
(Conserved hypothetical protein.)
genome : 72,900,790 - 72,901,126 (337)
query : 1 - 336 (336/336)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, cyto_nucl 3.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
HIX0016874
HIT000014393
(
AK057786
)
(Hypothetical protein.)
genome : 72,902,817 - 72,904,244 (1,428)
query : 1 - 1,428 (1,428/1,428)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, cyto_nucl 8.33333, extr 7, cyto_plas 6.83333,
mito 4, nucl 3.5, mito_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
HIX0016874
HIT000306057
(
CR627010
)
(Conserved hypothetical protein.)
genome : 72,902,841 - 72,906,936 (4,096)
query : 1 - 4,099 (4,099/4,236)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 5, cyto 4.5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016874)
HIX0203368
HIT000544046 (
ENST00000446112
)
(Selenophosphate synthetase family protein.)
genome : 72,989,083 - 72,990,258 (1,176)
query : 1 - 1,176 (1,176/1,176)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 17.5, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203368)
HIX0203368
HIT000636175_02 (
ENST00000537130
)
(Selenophosphate synthetase family protein.)
genome : 72,989,276 - 72,990,811 (1,536)
query : 32 - 1,569 (1,538/1,569)
1 exon
identity = 0.959
5'(0.959)3'
coverage = 0.980
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto 10, cyto_nucl 8, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203368)
HIX0023508
HIT000398503 (
NR_003255
)
(Retroviral matrix protein domain containing protein.)
genome : 73,012,040 - 73,049,066 (37,027)
query : 1 - 37,027 (37,027/37,027)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000320711 (
NR_001564
)
(Conserved hypothetical protein.)
genome : 73,040,486 - 73,072,588 (32,103)
query : 1 - 19,280 (19,280/19,296)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000532773 (
ENST00000434839
)
(Hypothetical short protein.)
genome : 73,040,486 - 73,046,290 (5,805)
query : 1 - 720 (720/720)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 7.16667, nucl 5, cyto 5,
cyto_pero 4.33333, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000519256 (
ENST00000421322
)
(Hypothetical short protein.)
genome : 73,040,488 - 73,046,641 (6,154)
query : 1 - 446 (446/446)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000527763 (
ENST00000429829
)
(Conserved hypothetical protein.)
genome : 73,040,491 - 73,072,588 (32,098)
query : 1 - 19,275 (19,275/19,275)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000514264 (
ENST00000416330
)
(Hypothetical short protein.)
genome : 73,040,491 - 73,046,179 (5,689)
query : 1 - 750 (750/750)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6.66667, cyto 5, cyto_pero 4.33333,
nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000515876 (
ENST00000417942
)
(Hypothetical short protein.)
genome : 73,040,491 - 73,046,136 (5,646)
query : 1 - 724 (724/724)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 5.33333, cyto 4, nucl 3.5,
cyto_pero 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000322012
(
X56196
)
(Hypothetical short protein.)
genome : 73,040,492 - 73,040,874 (383)
query : 1 - 383 (383/383)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000011474
(
AK054860
)
(Hypothetical short protein.)
genome : 73,040,495 - 73,043,154 (2,660)
query : 1 - 2,659 (2,659/2,659)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 5.5, cyto_nucl 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000322013
(
X56197
)
(Non-protein coding transcript.)
genome : 73,041,896 - 73,042,061 (166)
query : 1 - 166 (166/166)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000008472
(
AK025198
)
(Conserved hypothetical protein.)
genome : 73,043,161 - 73,045,320 (2,160)
query : 1 - 2,160 (2,160/2,176)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000306420
(
CR749383
)
(Conserved hypothetical protein.)
genome : 73,043,155 - 73,050,960 (7,806)
query : 2 - 4,890 (4,889/4,890)
3 exons
identity = 0.999
3'(0.998;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000322014
(
X56198
)
(Non-protein coding transcript.)
genome : 73,044,458 - 73,044,626 (169)
query : 1 - 169 (169/170)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.994
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000056970
(
BX648323
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,045,285 - 73,063,192 (17,908)
query : 1 - 5,086 (5,086/5,106)
6 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0056265
HIT000322015
(
X56199
)
Representative transcript
(Hypothetical protein.)
genome : 73,045,488 - 73,047,074 (1,587)
query : 26 - 1,610 (1,585/1,614)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.982
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 14, cyto_nucl 11.5, extr 7, cyto 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056265)
HIX0023508
HIT000490182
(
AK295558
)
(Conserved hypothetical protein.)
genome : 73,046,289 - 73,047,729 (1,441)
query : 1 - 1,441 (1,441/1,441)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000531666 (
ENST00000433732
)
(Hypothetical short protein.)
genome : 73,047,544 - 73,049,302 (1,759)
query : 1 - 676 (676/676)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000714320 (
ENST00000602587
)
(Hypothetical short protein.)
genome : 73,047,582 - 73,051,232 (3,651)
query : 1 - 583 (583/583)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, mito_pero 12, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000543748 (
ENST00000445814
)
(Hypothetical short protein.)
genome : 73,047,636 - 73,051,045 (3,410)
query : 1 - 437 (437/437)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 5.5, cyto_nucl 4, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000714596 (
ENST00000602863
)
(Hypothetical short protein.)
genome : 73,048,923 - 73,061,505 (12,583)
query : 1 - 775 (775/775)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 5.5, cyto_nucl 4, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000714228 (
ENST00000602495
)
(Hypothetical short protein.)
genome : 73,048,973 - 73,053,596 (4,624)
query : 1 - 827 (827/827)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 5.5, cyto_nucl 4, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0023508
HIT000449942_04
(
DQ583411
)
(Non-protein coding transcript.)
genome : 73,064,906 - 73,064,936 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023508)
HIX0213505
HIT000456591_11
(
DQ590060
)
Representative transcript
(Non-protein coding transcript.)
genome : 73,085,479 - 73,085,506 (28)
query : 1 - 28 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213505)
HIX0213557
HIT000598929 (
ENST00000495569
)
(Ion-transport regulator, FXYD motif family protein.)
genome : 73,094,903 - 73,095,470 (568)
query : 1 - 285 (285/285)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213557)
HIX0019578
HIT000562745 (
NR_024582
)
(PTGES3L-AARSD1 protein isoform 2.)
genome : 73,164,159 - 73,290,216 (126,058)
query : 1 - 1,669 (1,669/1,696)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2, cyto 2, cyto_nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019578)
HIX0019578
HIT000714653 (
ENST00000602920
)
(Conserved hypothetical protein.)
genome : 73,164,159 - 73,224,386 (60,228)
query : 1 - 625 (625/625)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12, extr 11, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019578)
HIX0019578
HIT000714027 (
ENST00000602294
)
(Conserved hypothetical protein.)
genome : 73,164,159 - 73,224,186 (60,028)
query : 1 - 502 (502/502)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto_nucl 3.5, cyto 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019578)
HIX0019578
HIT000714671 (
ENST00000602938
)
(Conserved hypothetical protein.)
genome : 73,164,159 - 73,218,949 (54,791)
query : 1 - 581 (581/581)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto_nucl 3.5, cyto 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019578)
HIX0019578
HIT000714470 (
ENST00000602737
)
(Conserved hypothetical protein.)
genome : 73,164,162 - 73,167,041 (2,880)
query : 1 - 544 (544/544)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29, nucl 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019578)
HIX0019578
HIT000264595
(
BC071776
)
Representative transcript
(PTGES3L-AARSD1 protein isoform 2.)
genome : 73,164,163 - 73,290,216 (126,054)
query : 1 - 1,665 (1,665/1,692)
5 exons
identity = 0.998
5'(1.000;1.000;0.984;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR009000 : Translation protein, beta-barrel domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2, cyto 2, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019578)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC077118
Oryzias
sp. (Medaka) : ENSORLT00000005094
Macaca
sp. (Macaque) : XM_001112499
Pan
sp. (Chimpanzee) : XR_020329
HIX0019578
HIT000714505 (
ENST00000602772
)
(PTGES3L-AARSD1 protein isoform 2.)
genome : 73,164,163 - 73,290,243 (126,081)
query : 1 - 1,692 (1,692/1,692)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019578)
HIX0019578
HIT000012786
(
AK056172
)
(Conserved hypothetical protein.)
genome : 73,164,177 - 73,220,326 (56,150)
query : 1 - 2,194 (2,194/2,194)
5 exons
identity = 0.999
5'(1.000;1.000;0.995;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 8, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019578)
HIX0019578
HIT000512143 (
ENST00000414209
)
(Conserved hypothetical protein.)
genome : 73,164,177 - 73,220,326 (56,150)
query : 1 - 2,194 (2,194/2,194)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 8.33333, cyto 8, nucl 7.5,
cyto_pero 4.83333, mito_nucl 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019578)
HIX0019578
HIT000714628 (
ENST00000602895
)
(Conserved hypothetical protein.)
genome : 73,164,178 - 73,219,338 (55,161)
query : 1 - 829 (829/829)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29, nucl 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019578)
HIX0019578
HIT000714279 (
ENST00000602546
)
(Conserved hypothetical protein.)
genome : 73,164,181 - 73,219,203 (55,023)
query : 1 - 762 (762/762)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto_nucl 3.5, cyto 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019578)
HIX0019578
HIT000551251 (
ENST00000453317
)
(Hypothetical short protein.)
genome : 73,164,181 - 73,164,781 (601)
query : 1 - 483 (483/483)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29, nucl 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019578)
HIX0019578
HIT000714718 (
ENST00000602985
)
(Conserved hypothetical protein.)
genome : 73,164,186 - 73,224,386 (60,201)
query : 1 - 476 (476/476)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29, nucl 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019578)
HIX0019578
HIT000513149 (
ENST00000415215
)
(Conserved hypothetical protein.)
genome : 73,164,202 - 73,167,265 (3,064)
query : 1 - 475 (475/475)
4 exons
identity = 0.996
5'(1.000;1.000;1.000;0.991)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 7.5, cyto_nucl 7.33333, cyto 6,
cyto_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019578)
HIX0019578
HIT000637564 (
ENST00000538519
)
(Conserved hypothetical protein.)
genome : 73,164,437 - 73,167,041 (2,605)
query : 1 - 269 (269/269)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 6.83333, nucl 6.5, cyto 6,
cyto_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019578)
HIX0177364
HIT000542416 (
ENST00000444482
)
(Conserved hypothetical protein.)
genome : 73,168,808 - 73,169,393 (586)
query : 1 - 451 (451/451)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 10, cyto 9, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177364)
HIX0056223
HIT000088386
(
BC014382
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,227,451 - 73,228,854 (1,404)
query : 3 - 1,403 (1,401/1,430)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9.5, cyto_nucl 9, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056223)
HIX0056223
HIT000095294
(
BC038589
)
(Conserved hypothetical protein.)
genome : 73,228,158 - 73,228,868 (711)
query : 12 - 722 (711/738)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 0.985
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9.5, cyto_nucl 9, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056223)
HIX0019906
HIT000430211
(
AK311345
)
(Conserved hypothetical protein.)
genome : 73,247,971 - 73,513,409 (265,439)
query : 1 - 2,356 (2,356/2,356)
7 exons
identity = 0.999
3'(0.999;0.996;1.000;1.000;1.000;0.993;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019906)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : CR858557
HIX0019906
HIT000657798 (
NR_028379
)
(Conserved hypothetical protein.)
genome : 73,247,971 - 73,513,409 (265,439)
query : 1 - 2,356 (2,356/2,356)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3.5, cyto_nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019906)
HIX0019906
HIT000714545 (
ENST00000602812
)
(Conserved hypothetical protein.)
genome : 73,247,971 - 73,513,409 (265,439)
query : 1 - 2,356 (2,356/2,356)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019906)
HIX0177159
HIT000527077 (
ENST00000429143
)
(Ribosomal protein S2, flavodoxin-like domain containing protein.)
genome : 73,251,297 - 73,251,655 (359)
query : 1 - 359 (359/359)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 11, nucl 10, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177159)
HIX0176781
HIT000347500 (
ENST00000366220
)
(Conserved hypothetical protein.)
genome : 73,285,918 - 73,286,427 (510)
query : 1 - 510 (510/510)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0176781)
HIX0019578
HIT000511442 (
ENST00000413508
)
(Alanyl-tRNA editing protein Aarsd1.)
genome : 73,289,111 - 73,290,667 (1,557)
query : 1 - 1,182 (1,182/1,182)
2 exons
identity = 0.997
5'(1.000;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 11, mito 7, extr 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019578)
HIX0019906
HIT000714153 (
ENST00000602420
)
(Alanyl-tRNA editing protein Aarsd1.)
genome : 73,289,193 - 73,513,307 (224,115)
query : 1 - 751 (751/751)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019906)
HIX0203364
HIT000529273 (
ENST00000431339
)
(SRA-YDG domain containing protein.)
genome : 73,325,407 - 73,327,793 (2,387)
query : 1 - 2,387 (2,387/2,387)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203364)
HIX0198534
HIT000516165 (
ENST00000418231
)
(DEAD/DEAH box helicase domain containing protein.)
genome : 73,340,847 - 73,351,758 (10,912)
query : 1 - 1,950 (1,950/1,950)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0198534)
HIX0177397
HIT000544072 (
ENST00000446138
)
(Conserved hypothetical protein.)
genome : 73,352,839 - 73,352,949 (111)
query : 1 - 111 (111/111)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.5, nucl 9.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177397)
HIX0177376
HIT000543197 (
ENST00000445263
)
(Zinc finger, CCCH-type domain containing protein.)
genome : 73,380,897 - 73,382,363 (1,467)
query : 1 - 1,467 (1,467/1,467)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 6.5, cyto_nucl 6.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177376)
HIX0177115
HIT000523898 (
ENST00000425964
)
(DAPIT family protein.)
genome : 73,393,725 - 73,393,901 (177)
query : 1 - 177 (177/177)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 26, cyto_nucl 14.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177115)
HIX0077296
HIT000512185 (
ENST00000414251
)
(BMP-2-inducible protein kinase family protein.)
genome : 73,405,764 - 73,406,988 (1,225)
query : 1 - 1,225 (1,225/1,225)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 15.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077296)
HIX0077296
HIT000354768_01 (
ENST00000373488
)
(BMP-2-inducible protein kinase, C-terminal domain containing protein.)
genome : 73,406,775 - 73,406,990 (216)
query : 1 - 216 (216/216)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 13.5, cyto 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077296)
HIX0028409
HIT000046233
(
AK126360
)
Representative transcript
(Hypothetical short protein.)
genome : 73,416,194 - 73,418,548 (2,355)
query : 1 - 2,355 (2,355/2,355)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11.5, extr 7, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028409)
HIX0028349
HIT000043882
(
AK124009
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,420,064 - 73,422,812 (2,749)
query : 1 - 2,747 (2,747/2,747)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028349)
HIX0260816
HIT000045174
(
AK125301
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,421,437 - 73,461,983 (40,547)
query : 1 - 2,523 (2,523/2,523)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0260816)
HIX0028349
HIT000536271 (
ENST00000438337
)
(Conserved hypothetical protein.)
genome : 73,422,669 - 73,424,430 (1,762)
query : 1 - 1,762 (1,762/1,762)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028349)
HIX0028481
HIT000057680
(
BX649033
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,425,071 - 73,428,011 (2,941)
query : 1 - 2,942 (2,942/2,977)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 7.5, cyto 7, nucl 4, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028481)
HIX0028358
HIT000049760
(
AK130489
)
(Conserved hypothetical protein.)
genome : 73,429,805 - 73,431,761 (1,957)
query : 1 - 1,957 (1,957/2,019)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.969
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 7, lyso 2, nucl 1.5, cyto_nucl 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028358)
HIX0028358
HIT000091318
(
BC027222
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,430,372 - 73,433,495 (3,124)
query : 1 - 3,125 (3,125/3,148)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 7, lyso 2, nucl 1.5, cyto_nucl 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028358)
HIX0148024
HIT000347281 (
ENST00000365696
)
(Non-protein coding transcript.)
genome : 73,438,212 - 73,438,296 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148024)
HIX0148024
HIT000658390 (
NR_030398
)
(Non-protein coding transcript.)
genome : 73,438,212 - 73,438,296 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148024)
HIX0148475
HIT000474274 (
ENST00000390738
)
(Non-protein coding transcript.)
genome : 73,438,382 - 73,438,453 (72)
query : 1 - 72 (72/72)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148475)
HIX0148475
HIT000658430 (
NR_030620
)
(Non-protein coding transcript.)
genome : 73,438,382 - 73,438,453 (72)
query : 1 - 72 (72/72)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148475)
HIX0213609
HIT000659870 (
NR_037511
)
(Non-protein coding transcript.)
genome : 73,438,384 - 73,438,453 (70)
query : 1 - 70 (70/70)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213609)
HIX0056354
HIT000081731
(
AK074696
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,443,169 - 73,445,109 (1,941)
query : 1 - 1,941 (1,941/1,941)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056354)
HIX0019906
HIT000528706 (
ENST00000430772
)
(Conserved hypothetical protein.)
genome : 73,467,699 - 73,513,362 (45,664)
query : 1 - 708 (708/708)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019906)
HIX0028351
HIT000048173
(
AK128300
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,486,220 - 73,489,104 (2,885)
query : 1 - 2,889 (2,889/2,889)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 6, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028351)
HIX0028351
HIT000044179
(
AK124306
)
(Conserved hypothetical protein.)
genome : 73,486,220 - 73,488,478 (2,259)
query : 1 - 2,261 (2,261/2,261)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028351)
HIX0019906
HIT000714309 (
ENST00000602576
)
(Conserved hypothetical protein.)
genome : 73,494,177 - 73,512,430 (18,254)
query : 1 - 574 (574/574)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019906)
HIX0019906
HIT000714509 (
ENST00000602776
)
(Conserved hypothetical protein.)
genome : 73,494,191 - 73,512,364 (18,174)
query : 1 - 561 (561/561)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019906)
HIX0019906
HIT000014308
(
AK057701
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,498,209 - 73,512,435 (14,227)
query : 1 - 2,597 (2,597/2,597)
4 exons
identity = 0.988
3'(0.986;1.000;0.993;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019906)
HIX0019906
HIT000527058 (
ENST00000429124
)
(Conserved hypothetical protein.)
genome : 73,498,209 - 73,512,435 (14,227)
query : 1 - 2,597 (2,597/2,597)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019906)
HIX0019906
HIT000088973
(
BC016373
)
(Conserved hypothetical protein.)
genome : 73,499,233 - 73,500,920 (1,688)
query : 1 - 1,252 (1,252/1,309)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019906)
HIX0019906
HIT000516789 (
ENST00000418855
)
(Conserved hypothetical protein.)
genome : 73,500,236 - 73,512,186 (11,951)
query : 1 - 579 (579/579)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019906)
HIX0019906
HIT000553329 (
ENST00000455395
)
(Conserved hypothetical protein.)
genome : 73,500,296 - 73,511,910 (11,615)
query : 1 - 654 (654/654)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019906)
HIX0019906
HIT000521926 (
ENST00000423992
)
(Conserved hypothetical protein.)
genome : 73,500,766 - 73,513,374 (12,609)
query : 1 - 696 (696/696)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019906)
HIX0148397
HIT000471004 (
ENST00000385085
)
(Non-protein coding transcript.)
genome : 73,506,939 - 73,507,044 (106)
query : 1 - 106 (106/106)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148397)
HIX0148397
HIT000658266 (
NR_030258
)
(Non-protein coding transcript.)
genome : 73,506,939 - 73,507,044 (106)
query : 1 - 106 (106/106)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148397)
HIX0148006
HIT000343927 (
ENST00000362298
)
(Non-protein coding transcript.)
genome : 73,507,121 - 73,507,192 (72)
query : 1 - 72 (72/72)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148006)
HIX0148006
HIT000658485 (
NR_030785
)
(Non-protein coding transcript.)
genome : 73,507,121 - 73,507,192 (72)
query : 1 - 72 (72/72)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148006)
HIX0021149
HIT000319960 (
NM_203303
)
(Zinc finger CCHC domain-containing protein 13.)
genome : 73,524,025 - 73,524,869 (845)
query : 1 - 845 (845/859)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 11, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021149)
HIX0021149
HIT000039118
(
BC021176
)
Representative transcript
(Zinc finger CCHC domain-containing protein 13.)
genome : 73,524,025 - 73,524,865 (841)
query : 1 - 841 (841/856)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
InterPro :
IPR001878 : Zinc finger, CCHC-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 11, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021149)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK015789
Tetraodon
sp. (Tetraodon) : CR666029
Rattus
sp. (Rat) : XM_001055840
Bos
sp. (Cow) : XM_001253574
Equus
sp. (Horse) : XM_001504974
Pan
sp. (Chimpanzee) : XM_529043
HIX0021149
HIT000132164 (
ENST00000339534
)
(Zinc finger CCHC domain-containing protein 13.)
genome : 73,524,025 - 73,524,868 (844)
query : 1 - 844 (844/844)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 11, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021149)
HIX0177328
HIT000539792 (
ENST00000441858
)
(Ribosomal protein L39e domain containing protein.)
genome : 73,562,548 - 73,562,695 (148)
query : 1 - 148 (148/148)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177328)
HIX0137998
HIT000476674 (
ENST00000393214
)
(Conserved hypothetical protein.)
genome : 73,595,960 - 73,596,720 (761)
query : 1 - 761 (761/761)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 9, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0137998)
BX295541.1
72000001-72017545 F +
NCBI
BX293538.6
72017546-72088486 F -
NCBI
AL353999.3
72088487-72212860 F +
NCBI
AL662864.14
72212861-72331635 F +
NCBI
AC004389.1
72331636-72419314 F -
NCBI
AC004074.1
72419315-72572198 F -
NCBI
AL512507.6
72572199-72588828 F +
NCBI
AL450108.12
72588829-72777009 F +
NCBI
AL358796.43
72777010-72849436 F +
NCBI
AL356513.15
72849437-73028055 F +
NCBI
AL683895.5
73028056-73038432 F +
NCBI
AL353804.22
73038433-73204100 F +
NCBI
AL139400.9
73204101-73289435 F +
NCBI
AL627389.4
73289436-73293303 F +
NCBI
AL359740.24
73293304-73389407 F +
NCBI
Z83843.3
73389408-73435235 F +
NCBI
AC004386.1
73435236-73600000 F +
NCBI