Clickable map CGI

HIX0177870
HIT000518108 ( ENST00000420174 )
  (Conserved hypothetical protein.)
  genome : 22,551,937 - 22,558,682 (6,746)
  query : 1 - 1,098 (1,098/1,098)
  3 exons
  identity = 0.998
  5'(1.000;0.996;1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 29
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177870)

HIX0056678
HIT000077724 ( AF332239 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 22,627,554 - 22,681,114 (53,561)
  query : 1 - 1,628 (1,628/1,628)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 25, nucl 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056678)

HIX0056678
HIT000320690 ( NR_001542 )
  (Conserved hypothetical protein.)
  genome : 22,627,554 - 22,681,114 (53,561)
  query : 1 - 1,628 (1,628/1,628)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 25, nucl 4
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056678)

HIX0056678
HIT000553018 ( ENST00000455084 )
  (Conserved hypothetical protein.)
  genome : 22,627,554 - 22,681,114 (53,561)
  query : 1 - 1,628 (1,628/1,628)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 25, nucl 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056678)

HIX0056678
HIT000537406 ( ENST00000439472 )
  (Hypothetical short protein.)
  genome : 22,669,140 - 22,680,293 (11,154)
  query : 1 - 340 (340/340)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056678)

HIX0017196
HIT000201421 ( NM_004681 )
  (Eukaryotic translation initiation factor 1A, Y-chromosomal; eIF-1A Y isoform; Eukaryotic translation initiation factor 4C; eIF-4C;)
  genome : 22,737,611 - 22,755,040 (17,430)
  query : 1 - 1,390 (1,390/1,399)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 13.5, cyto 12.5, nucl 9.5, mito 6
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017196)

HIX0017196
HIT000314630 ( ENST00000361365 )
  (Eukaryotic translation initiation factor 1A, Y-chromosomal; eIF-1A Y isoform; Eukaryotic translation initiation factor 4C; eIF-4C;)
  genome : 22,737,611 - 22,755,040 (17,430)
  query : 1 - 1,390 (1,390/1,390)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 13.5, cyto 12.5, nucl 9.5, mito 6
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017196)

HIX0017196
HIT000569958 ( ENST00000465253 )
  (Eukaryotic translation initiation factor 1A, Y-chromosomal; eIF-1A Y isoform; Eukaryotic translation initiation factor 4C; eIF-4C;)
  genome : 22,737,664 - 22,750,415 (12,752)
  query : 1 - 855 (855/855)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 14.5, cyto_nucl 13.5, nucl 11.5, extr 3, mito 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017196)

HIX0017196
HIT000364050 ( ENST00000382772 )
  (Eukaryotic translation initiation factor 1A, Y-chromosomal; eIF-1A Y isoform; Eukaryotic translation initiation factor 4C; eIF-4C;)
  genome : 22,737,680 - 22,754,516 (16,837)
  query : 1 - 746 (746/746)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 12, cyto_nucl 12, nucl 8, mito 7, extr 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017196)

HIX0017196
HIT000568959 ( ENST00000464196 )
  (Conserved hypothetical protein.)
  genome : 22,748,604 - 22,754,516 (5,913)
  query : 1 - 3,148 (3,148/3,148)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 14, cyto 10.5, cyto_nucl 7.5, nucl 3.5, mito 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017196)

HIX0017196
HIT000047537 ( AK127664 )
  (Conserved hypothetical protein.)
  genome : 22,748,604 - 22,754,512 (5,909)
  query : 1 - 3,144 (3,144/3,144)
  2 exons
  identity = 0.999
  5'(0.999;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 14, cyto 10.5, cyto_nucl 7.5, nucl 3.5, mito 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017196)

HIX0017196
HIT000589382 ( ENST00000485584 )
  (Conserved hypothetical protein.)
  genome : 22,749,733 - 22,754,516 (4,784)
  query : 1 - 641 (641/641)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 13, cyto 12, nucl 3, mito 3, mito_nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017196)

HIX0177952
HIT000538231 ( ENST00000440297 )
  (WD40-repeat-containing domain containing protein.)
  genome : 22,889,140 - 22,904,786 (15,647)
  query : 1 - 1,026 (1,026/1,026)
  9 exons
  identity = 0.998
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      0.992;0.986)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 27, cyto_nucl 2, pero 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177952)

HIX0056683
HIT000366454 ( NM_001039567 )
  (40S ribosomal protein S4, Y isoform 2.)
  genome : 22,917,954 - 22,942,918 (24,965)
  query : 1 - 888 (888/888)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 21, mito 11
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056683)

HIX0056683
HIT000113022 ( ENST00000288666 )
  (40S ribosomal protein S4, Y isoform 2.)
  genome : 22,918,663 - 22,942,918 (24,256)
  query : 3 - 792 (790/792)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 0.997
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 21, mito 11
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056683)

HIX0177855
HIT000513928 ( ENST00000415994 )
  (Conserved hypothetical protein.)
  genome : 22,970,662 - 22,973,695 (3,034)
  query : 1 - 1,181 (1,181/1,181)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, extr 7, cyto_nucl 6.33333, cyto 5.5,
    E.R._mito 5.5, nucl 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177855)

HIX0177834
HIT000505471 ( ENST00000406090 )
  (Protein of unknown function DUF4607 family protein.)
  genome : 23,005,142 - 23,005,596 (455)
  query : 1 - 455 (455/455)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 21, cyto_nucl 16.5, cyto 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177834)

HIX0177982
HIT000547792 ( ENST00000449858 )
  (Glyceraldehyde/Erythrose phosphate dehydrogenase family protein.)
  genome : 23,023,223 - 23,024,223 (1,001)
  query : 1 - 1,001 (1,001/1,001)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 16, nucl 6, cyto 5, mito_nucl 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177982)

HIX0177882
HIT000521343 ( ENST00000423409 )
  (Protein of unknown function DUF1242 family protein.)
  genome : 23,069,230 - 23,069,448 (219)
  query : 1 - 219 (219/219)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 22, plas 10
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177882)

HIX0177866
HIT000516512 ( ENST00000418578 )
  (Conserved hypothetical protein.)
  genome : 23,292,756 - 23,293,067 (312)
  query : 1 - 312 (312/312)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 25.5, cyto_mito 14, plas 2.5, nucl 2,
    extr_plas 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177866)

HIX0177940
HIT000534298 ( ENST00000436364 )
  (Conserved hypothetical protein.)
  genome : 23,382,992 - 23,383,975 (984)
  query : 1 - 984 (984/984)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 12.5, cyto_nucl 9.5, extr 8, nucl 5.5, mito 4,
    extr_plas 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177940)

HIX0019386
HIT000021991 ( AK097136 )
  Representative transcript
  (40S ribosomal protein S17;)
  genome : 23,402,143 - 23,411,015 (8,873)
  query : 171 - 2,637 (2,467/2,637)
  4 exons
  identity = 0.997
  3'(1.000;0.999;0.985;1.000)5'
  coverage = 0.936
  InterPro :
    IPR001210 : Ribosomal protein S17e
  GO :
    0003735 : Molecular Function : structural constituent of ribosome
    0005622 : Cellular Component : intracellular
    0005840 : Cellular Component : ribosome
    0006412 : Biological Process : translation
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 14.5, cyto_nucl 9, mito 8, extr 4, E.R._mito 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019386)

HIX0177943
HIT000535293 ( ENST00000437359 )
  (Conserved hypothetical protein.)
  genome : 23,473,154 - 23,480,781 (7,628)
  query : 1 - 1,052 (1,052/1,052)
  9 exons
  identity = 0.985
  5'(0.973;0.978;0.961;0.913;1.000;1.000;1.000;
      1.000;0.985)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 12.5, nucl 12, extr 11, cyto 9
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177943)

HIX0019628
HIT000009641 ( AK026367 )
  Representative transcript
  (Domain of unknown function DUF1725 domain containing protein.)
  genome : 23,544,861 - 23,613,732 (68,872)
  query : 1 - 1,056 (1,056/1,077)
  5 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR013544 : Domain of unknown function DUF1725
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 16.5, cyto_nucl 13, cyto 6.5, mito 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019628)

HIX0019628
HIT000364042 ( ENST00000382764 )
  (Domain of unknown function DUF1725 domain containing protein.)
  genome : 23,544,861 - 23,548,246 (3,386)
  query : 1 - 857 (857/878)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 16.5, cyto_nucl 13, cyto 6.5, mito 6
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019628)

HIX0056712
HIT000554294 ( ENST00000456360 )
  (RNA-binding motif protein, Y chromosome, family 1 member C;)
  genome : 23,556,877 - 23,563,471 (6,595)
  query : 1 - 940 (940/940)
  7 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056712)

HIX0056712
HIT000222706 ( U94388 )
  Representative transcript
  (RNA-binding motif protein, Y chromosome, family 1 member F/J; Y chromosome RNA recognition motif 2;)
  genome : 23,557,034 - 23,563,448 (6,415)
  query : 1 - 534 (534/534)
  5 exons
  identity = 0.991
  3'(0.979;1.000;1.000;1.000;0.977)5'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056712)
  Ortholog candidate  ( -> Evola )
    Pan sp. (Chimpanzee) : ENSPTRT00000046688

HIX0056712
HIT000320718 ( NR_001574 )
  (RNA binding motif protein, X-linked-like-1; Heterogeneous nuclear ribonucleoprotein G-like 1; RNA binding motif protein, X chromosome retrogene;)
  genome : 23,557,034 - 23,563,448 (6,415)
  query : 1 - 534 (534/534)
  5 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056712)

HIX0056712
HIT000542103 ( ENST00000444169 )
  (RNA binding motif protein, X-linked-like-1; Heterogeneous nuclear ribonucleoprotein G-like 1; RNA binding motif protein, X chromosome retrogene;)
  genome : 23,557,034 - 23,563,448 (6,415)
  query : 1 - 534 (534/534)
  5 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056712)

HIX0017811
HIT000024650 ( AL117488 )
  Representative transcript
  (Testis-specific Y-encoded protein 1; Cancer/testis antigen 78; CT78;)
  genome : 23,567,548 - 23,570,156 (2,609)
  query : 2 - 2,448 (2,447/2,457)
  2 exons
  identity = 0.998
  5'(0.998;0.996)3'
  coverage = 1.000
  InterPro :
    IPR002164 : Nucleosome assembly protein (NAP)
  GO :
    0005634 : Cellular Component : nucleus
    0006334 : Biological Process : nucleosome assembly
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 19, cyto 11.5, cyto_nucl 7
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017811)

HIX0017811
HIT000526550 ( ENST00000428616 )
  (Non-protein coding transcript.)
  genome : 23,567,656 - 23,567,881 (226)
  query : 1 - 226 (226/226)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017811)

HIX0177988
HIT000549096 ( ENST00000451162 )
  (RBM1CTR domain containing protein.)
  genome : 23,592,583 - 23,599,131 (6,549)
  query : 1 - 947 (947/947)
  6 exons
  identity = 0.999
  3'(1.000;1.000;1.000;0.991;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 28, mito 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177988)

HIX0177732
HIT000523252 ( ENST00000425318 )
  (Conserved hypothetical protein.)
  genome : 23,627,270 - 23,629,049 (1,780)
  query : 1 - 520 (520/520)
  3 exons
  identity = 0.979
  3'(1.000;0.936;0.982)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 14, nucl 13, cyto 11, extr 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177732)

HIX0260960
HIT000116599 ( ENST00000303979 )
  (Nucleosome assembly protein (NAP) family protein.)
  genome : 23,630,044 - 23,632,569 (2,526)
  query : 1 - 915 (915/915)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cysk 27, nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0260960)

HIX0077367
HIT000364037_03 ( ENST00000382759 )
  (Hypothetical protein.)
  genome : 23,655,405 - 23,663,854 (8,450)
  query : 1 - 1,389 (1,389/1,389)
  10 exons
  identity = 0.997
  5'(1.000;1.000;1.000;1.000;1.000;1.000;0.982;
      0.983;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 13, nucl 12.5, cyto 10.5, extr 9
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077367)

HIX0077367
HIT000124800 ( ENST00000326985 )
  (RBM1CTR domain containing protein.)
  genome : 23,655,405 - 23,662,879 (7,475)
  query : 1 - 801 (801/801)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 28, mito 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077367)

HIX0077367
HIT000523977_01 ( ENST00000426043 )
  (Hypothetical protein.)
  genome : 23,661,276 - 23,663,854 (2,579)
  query : 1 - 726 (726/726)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077367)

HIX0177799
HIT000219446_07 ( U36217 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 23,663,145 - 23,663,555 (411)
  query : 1 - 411 (411/411)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177799)

HIX0077370
HIT000316284_04 ( NM_001006121 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 23,673,224 - 23,687,672 (14,449)
  query : 1 - 1,921 (1,921/1,921)
  12 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077370)

HIX0077370
HIT000364298 ( ENST00000383020 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 23,673,224 - 23,687,672 (14,449)
  query : 1 - 1,921 (1,921/1,921)
  12 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077370)

HIX0077370
HIT000053246_03 ( BC047768 )
  (RNA-binding motif protein, Y chromosome, family 1 member C;)
  genome : 23,673,249 - 23,711,211 (37,963)
  query : 1 - 1,717 (1,717/1,793)
  11 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR012604 : RBM1CTR
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 23, cyto 5, mito 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077370)

HIX0077370
HIT000363917 ( ENST00000382639 )
  (RNA-binding motif protein, Y chromosome, family 1 member B.)
  genome : 23,673,249 - 23,687,672 (14,424)
  query : 1 - 1,718 (1,718/1,718)
  11 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077370)

HIX0077370
HIT000201776_03 ( NM_005058 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 23,673,258 - 23,711,211 (37,954)
  query : 1 - 1,886 (1,886/1,900)
  12 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077370)

HIX0077370
HIT000264256_03 ( BC070298 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 23,673,259 - 23,711,210 (37,952)
  query : 1 - 1,773 (1,773/1,804)
  11 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)3'
  coverage = 0.999
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012604 : RBM1CTR
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077370)

HIX0077370
HIT000500846_01 ( BC136862 )
  (RNA-binding motif protein, Y chromosome, family 1 member D.)
  genome : 23,673,311 - 23,687,440 (14,130)
  query : 1 - 1,491 (1,491/1,491)
  11 exons
  identity = 0.999
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;0.997)3'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012604 : RBM1CTR
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077370)

HIX0077370
HIT000501512_01 ( BC140758 )
  (RNA-binding motif protein, Y chromosome, family 1 member B.)
  genome : 23,673,311 - 23,687,440 (14,130)
  query : 1 - 1,491 (1,491/1,491)
  11 exons
  identity = 0.999
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;0.997)3'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012604 : RBM1CTR
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077370)

HIX0077370
HIT000502869_01 ( BC144459 )
  (RNA-binding motif protein, Y chromosome, family 1 member D.)
  genome : 23,673,311 - 23,687,440 (14,130)
  query : 1 - 1,491 (1,491/1,491)
  11 exons
  identity = 0.999
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;0.997)3'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012604 : RBM1CTR
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077370)

HIX0077370
HIT000523977_02 ( ENST00000426043 )
  (RNA-binding motif protein, X chromosome; Glycoprotein p43; Heterogeneous nuclear ribonucleoprotein G; hnRNP G; Contains: RNA-binding motif protein, X chromosome, N-terminally processed;)
  genome : 23,684,816 - 23,687,394 (2,579)
  query : 1 - 726 (726/726)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077370)

HIX0177800
HIT000219446_08 ( U36217 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 23,686,685 - 23,687,095 (411)
  query : 1 - 411 (411/411)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177800)

HIX0077370
HIT000363985_05 ( ENST00000382707 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 23,696,765 - 23,711,212 (14,448)
  query : 1 - 1,921 (1,921/1,921)
  12 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077370)

HIX0077370
HIT000314329_06 ( ENST00000361046 )
  (RNA-binding motif protein, Y chromosome, family 1 member C;)
  genome : 23,696,790 - 23,711,212 (14,423)
  query : 1 - 1,718 (1,718/1,718)
  11 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 23, cyto 5, mito 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077370)

HIX0077370
HIT000537042_02 ( ENST00000439108 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 23,696,799 - 23,711,210 (14,412)
  query : 1 - 1,885 (1,885/1,885)
  12 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077370)

HIX0077370
HIT000323563_05 ( X76059 )
  Representative transcript
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 23,696,799 - 23,711,204 (14,406)
  query : 1 - 1,878 (1,878/1,878)
  12 exons
  identity = 0.998
  5'(0.982;0.991;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012604 : RBM1CTR
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077370)

HIX0077370
HIT000116573_05 ( ENST00000303902 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 23,698,778 - 23,711,210 (12,433)
  query : 1 - 1,767 (1,767/1,767)
  11 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0077370)

HIX0177801
HIT000219446_09 ( U36217 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 23,710,225 - 23,710,635 (411)
  query : 1 - 411 (411/411)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177801)

HIX0056681
HIT000077727 ( AF332242 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 23,745,486 - 23,756,552 (11,067)
  query : 1 - 659 (659/659)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 23, nucl 4, plas 2, cyto 2, cyto_plas 2,
    mito_nucl 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056681)

HIX0056681
HIT000126619 ( ENST00000330337 )
  (Conserved hypothetical protein.)
  genome : 23,745,486 - 23,756,552 (11,067)
  query : 1 - 659 (659/659)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 23, nucl 4, plas 2, cyto 2, cyto_plas 2,
    mito_nucl 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056681)

HIX0056681
HIT000320685 ( NR_001537 )
  (Conserved hypothetical protein.)
  genome : 23,745,486 - 23,756,552 (11,067)
  query : 1 - 659 (659/659)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 23, nucl 4, plas 2, cyto 2, cyto_plas 2,
    mito_nucl 2
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056681)

HIX0177993
HIT000550349 ( ENST00000452415 )
  (Conserved hypothetical protein.)
  genome : 23,799,361 - 23,800,927 (1,567)
  query : 1 - 1,567 (1,567/1,567)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 25.5, cyto_nucl 15.5, nucl 4.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177993)

HIX0177928
HIT000532415 ( ENST00000434481 )
  (Conserved hypothetical protein.)
  genome : 23,823,812 - 23,835,894 (12,083)
  query : 1 - 1,766 (1,766/1,766)
  6 exons
  identity = 0.998
  5'(1.000;1.000;0.984;0.991;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 16, nucl 10, cyto 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177928)

HIX0177957
HIT000539847 ( ENST00000441913 )
  (Conserved hypothetical protein.)
  genome : 23,839,132 - 23,843,004 (3,873)
  query : 1 - 500 (500/500)
  3 exons
  identity = 0.988
  3'(1.000;1.000;0.930)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 16, cyto 15, nucl 9, extr 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177957)

HIX0177976
HIT000545102 ( ENST00000447168 )
  (Crotonase superfamily protein.)
  genome : 23,858,456 - 23,860,106 (1,651)
  query : 1 - 1,651 (1,651/1,651)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 16, mito 8, extr_plas 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177976)

HIX0177669
HIT000512474 ( ENST00000414540 )
  (Conserved hypothetical protein.)
  genome : 24,017,478 - 24,019,697 (2,220)
  query : 1 - 605 (605/605)
  3 exons
  identity = 0.990
  5'(1.000;1.000;0.903)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 13, cyto 12.5, nucl 10.5, extr 6
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177669)

HIX0177669
HIT000509519 ( ENST00000411585 )
  (Conserved hypothetical protein.)
  genome : 24,017,479 - 24,019,697 (2,219)
  query : 1 - 623 (623/623)
  4 exons
  identity = 0.979
  5'(1.000;1.000;0.944;0.903)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 9, mito 9, cyto 7, cyto_nucl 7,
    cyto_pero 5.83333, nucl 5.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177669)

HIX0056707
HIT000363958 ( ENST00000382680 )
  (RNA recognition motif domain containing protein.)
  genome : 24,026,223 - 24,040,673 (14,451)
  query : 1 - 1,921 (1,921/1,921)
  12 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056707)

HIX0056707
HIT000363931 ( ENST00000382653 )
  (RBM1CTR domain containing protein.)
  genome : 24,026,223 - 24,040,648 (14,426)
  query : 1 - 1,718 (1,718/1,718)
  11 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 23, cyto 5, mito 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056707)

HIX0056707
HIT000316283 ( NM_001006120 )
  (RNA recognition motif domain containing protein.)
  genome : 24,026,223 - 24,040,633 (14,411)
  query : 1 - 1,881 (1,881/1,881)
  12 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056707)

HIX0056707
HIT000363951 ( ENST00000382673 )
  (RNA recognition motif domain containing protein.)
  genome : 24,026,223 - 24,040,633 (14,411)
  query : 1 - 1,881 (1,881/1,881)
  12 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056707)

HIX0056707
HIT000363955 ( ENST00000382677 )
  (RNA recognition motif domain containing protein.)
  genome : 24,026,223 - 24,038,660 (12,438)
  query : 1 - 1,769 (1,769/1,769)
  11 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056707)

HIX0056707
HIT000500846_03 ( BC136862 )
  (RNA-binding motif protein, Y chromosome, family 1 member D.)
  genome : 24,026,455 - 24,040,586 (14,132)
  query : 1 - 1,491 (1,491/1,491)
  11 exons
  identity = 0.999
  3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012604 : RBM1CTR
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056707)

HIX0056707
HIT000501512_03 ( BC140758 )
  (RNA-binding motif protein, Y chromosome, family 1 member B.)
  genome : 24,026,455 - 24,040,586 (14,132)
  query : 1 - 1,491 (1,491/1,491)
  11 exons
  identity = 0.999
  3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012604 : RBM1CTR
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056707)

HIX0056707
HIT000502835_02 ( BC144423 )
  Representative transcript
  (RNA-binding motif protein, Y chromosome, family 1 member E.)
  genome : 24,026,455 - 24,040,586 (14,132)
  query : 1 - 1,542 (1,542/1,542)
  12 exons
  identity = 0.999
  3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012604 : RBM1CTR
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056707)

HIX0056707
HIT000502869_03 ( BC144459 )
  (RNA-binding motif protein, Y chromosome, family 1 member D.)
  genome : 24,026,455 - 24,040,586 (14,132)
  query : 1 - 1,491 (1,491/1,491)
  11 exons
  identity = 0.999
  3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012604 : RBM1CTR
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056707)

HIX0056707
HIT000516890 ( ENST00000418956 )
  (RNA recognition motif domain containing protein.)
  genome : 24,026,455 - 24,040,586 (14,132)
  query : 1 - 1,491 (1,491/1,491)
  11 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056707)

HIX0177798
HIT000219446_06 ( U36217 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 24,026,800 - 24,027,210 (411)
  query : 1 - 411 (411/411)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177798)

HIX0177769
HIT000554593 ( ENST00000456659 )
  (Conserved hypothetical protein.)
  genome : 24,041,541 - 24,043,712 (2,172)
  query : 1 - 717 (717/717)
  5 exons
  identity = 0.993
  5'(1.000;1.000;0.929;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 13, cyto 10.5, cyto_nucl 8.66667, cyto_pero 7.5,
    nucl 3.5, extr 2, pero 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177769)

HIX0177769
HIT000609466 ( ENST00000509611 )
  (Conserved hypothetical protein.)
  genome : 24,041,541 - 24,043,706 (2,166)
  query : 1 - 723 (723/723)
  5 exons
  identity = 0.983
  5'(1.000;1.000;0.943;0.946;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 14, cyto 10.5, cyto_nucl 10, nucl 6.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177769)

HIX0056703
HIT000363937 ( ENST00000382659 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 24,049,765 - 24,064,214 (14,450)
  query : 1 - 1,921 (1,921/1,921)
  12 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056703)

HIX0056703
HIT000312574 ( ENST00000358944 )
  (RNA-binding motif protein, Y chromosome, family 1 member E.)
  genome : 24,049,765 - 24,064,189 (14,425)
  query : 1 - 1,718 (1,718/1,718)
  11 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056703)

HIX0056703
HIT000316282 ( NM_001006118 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 24,049,765 - 24,064,174 (14,410)
  query : 1 - 1,881 (1,881/1,881)
  12 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056703)

HIX0056703
HIT000363936 ( ENST00000382658 )
  (RNA-binding motif protein, Y chromosome, family 1 member E.)
  genome : 24,049,997 - 24,064,127 (14,131)
  query : 1 - 1,491 (1,491/1,491)
  11 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056703)

HIX0056703
HIT000500846_04 ( BC136862 )
  (RNA-binding motif protein, Y chromosome, family 1 member D.)
  genome : 24,049,997 - 24,064,127 (14,131)
  query : 1 - 1,491 (1,491/1,491)
  11 exons
  identity = 0.999
  3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012604 : RBM1CTR
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056703)

HIX0056703
HIT000502835_03 ( BC144423 )
  Representative transcript
  (RNA-binding motif protein, Y chromosome, family 1 member E.)
  genome : 24,049,997 - 24,064,127 (14,131)
  query : 1 - 1,542 (1,542/1,542)
  12 exons
  identity = 0.999
  3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012604 : RBM1CTR
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056703)
  Ortholog candidate  ( -> Evola )
    Pan sp. (Chimpanzee) : XR_020062

HIX0056703
HIT000502869_04 ( BC144459 )
  (RNA-binding motif protein, Y chromosome, family 1 member D.)
  genome : 24,049,997 - 24,064,127 (14,131)
  query : 1 - 1,491 (1,491/1,491)
  11 exons
  identity = 0.999
  3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012604 : RBM1CTR
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0056703)

HIX0177802
HIT000219446_10 ( U36217 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 24,050,342 - 24,050,752 (411)
  query : 1 - 411 (411/411)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177802)

HIX0177739
HIT000524917 ( ENST00000426983 )
  (Conserved hypothetical protein.)
  genome : 24,065,082 - 24,067,253 (2,172)
  query : 1 - 750 (750/750)
  5 exons
  identity = 0.995
  5'(1.000;1.000;0.953;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 10.5, cyto_nucl 10.5, extr 10, nucl 7.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177739)

HIX0177739
HIT000550360 ( ENST00000452426 )
  (Conserved hypothetical protein.)
  genome : 24,065,082 - 24,067,253 (2,172)
  query : 1 - 721 (721/721)
  5 exons
  identity = 0.993
  5'(1.000;1.000;0.929;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cysk 12, cyto 8.5, extr 8, cyto_nucl 7
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177739)

HIX0177651
HIT000543339_01 ( ENST00000445405 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 24,073,668 - 24,083,297 (9,630)
  query : 1 - 1,157 (1,157/1,157)
  8 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 7.5, cyto 7, mito_pero 6.5, nucl 6, pero 4.5,
    plas 3, E.R. 2, extr_plas 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177651)

HIX0177651
HIT000546509_01 ( ENST00000448575 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 24,073,668 - 24,083,297 (9,630)
  query : 1 - 1,157 (1,157/1,157)
  8 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 7.5, cyto 7, mito_pero 6.5, nucl 6, pero 4.5,
    plas 3, E.R. 2, extr_plas 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177651)

HIX0177651
HIT000546815_01 ( ENST00000448881 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 24,073,668 - 24,083,297 (9,630)
  query : 1 - 1,157 (1,157/1,157)
  8 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 7.5, cyto 7, mito_pero 6.5, nucl 6, pero 4.5,
    plas 3, E.R. 2, extr_plas 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177651)

HIX0177651
HIT000549005_01 ( ENST00000451071 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 24,073,669 - 24,083,297 (9,629)
  query : 1 - 1,156 (1,156/1,156)
  8 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 7.5, cyto 7, mito_pero 6.5, nucl 6, pero 4.5,
    plas 3, E.R. 2, extr_plas 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177651)

HIX0177651
HIT000640447_01 ( ENST00000541402 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 24,077,766 - 24,083,297 (5,532)
  query : 1 - 438 (438/438)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 17.5, cyto_nucl 14, cyto 9.5, extr 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177651)

HIX0177651
HIT000222702_05 ( U94384 )
  Representative transcript
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 24,077,766 - 24,083,251 (5,486)
  query : 1 - 392 (392/392)
  4 exons
  identity = 0.997
  3'(1.000;1.000;1.000;0.984)5'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 19, extr 7, cyto 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177651)

HIX0177651
HIT000483447_05 ( ENST00000400476 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 24,077,766 - 24,083,251 (5,486)
  query : 1 - 392 (392/392)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 19, cyto 9, extr 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177651)

HIX0177651
HIT000483536_05 ( ENST00000400578 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 24,077,766 - 24,083,251 (5,486)
  query : 1 - 392 (392/392)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 19, cyto 9, extr 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177651)

HIX0177651
HIT000556378_01 ( ENST00000458444 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 24,077,766 - 24,083,251 (5,486)
  query : 1 - 392 (392/392)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 19, cyto 9, extr 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177651)

HIX0177966
HIT000541948_01 ( ENST00000444014 )
  (Hypothetical protein.)
  genome : 24,086,164 - 24,087,740 (1,577)
  query : 1 - 672 (672/672)
  4 exons
  identity = 0.965
  5'(0.950;0.939;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 17, cyto_nucl 8.66667, cyto 7.5, nucl 6.5,
    cyto_pero 5.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0177966)

HIX0261002
HIT000502834 ( BC144422 )
  (RNA-binding motif protein, Y chromosome, family 1 member F/J; Y chromosome RNA recognition motif 2;)
  genome : 24,026,455 - 24,329,042 (302,588)
  query : 1 - 1,491 (1,491/1,491)
  11 exons
  identity = 0.999
  3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012604 : RBM1CTR
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0261002)

HIX0261002
HIT000502983 ( BC144577 )
  Representative transcript
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 24,026,455 - 24,329,042 (302,588)
  query : 1 - 1,602 (1,602/1,602)
  12 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)5'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012604 : RBM1CTR
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0261002)

HIX0261002
HIT000503110 ( BC146853 )
  (RNA-binding motif protein, Y chromosome, family 1 member A1; RNA-binding motif protein 1; RNA-binding motif protein 2; Y chromosome RNA recognition motif 1; hRBMY;)
  genome : 24,026,455 - 24,329,042 (302,588)
  query : 1 - 1,602 (1,602/1,602)
  12 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)5'
  coverage = 1.000
  InterPro :
    IPR000504 : RNA recognition motif domain
    IPR012604 : RBM1CTR
    IPR012677 : Nucleotide-binding alpha-beta plait domain
  GO :
    0000166 : Molecular Function : nucleotide binding
    0003676 : Molecular Function : nucleic acid binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0261002)

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )