bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.mulatta
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_001099083
genome : 128,630,881 - 128,641,020 (10,140)
query : 1 - 4,718 (4,718/4,718)
10 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.870;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000030102
genome : 128,631,483 - 128,638,670 (7,188)
query : 1 - 1,766 (1,766/1,766)
10 exons
identity = 0.992
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.870;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001099798
genome : 128,638,030 - 128,642,784 (4,755)
query : 1 - 3,091 (3,091/3,091)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001099903
genome : 128,638,030 - 128,642,784 (4,755)
query : 1 - 3,139 (3,139/3,139)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001100088
genome : 128,638,030 - 128,642,784 (4,755)
query : 1 - 2,878 (2,878/2,878)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001100176
genome : 128,638,030 - 128,642,784 (4,755)
query : 1 - 3,214 (3,214/3,214)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001099695
genome : 128,638,030 - 128,642,640 (4,611)
query : 1 - 2,899 (2,899/2,899)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000030103
genome : 128,639,034 - 128,642,623 (3,590)
query : 1 - 2,045 (2,045/2,045)
6 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000030104
genome : 128,639,034 - 128,642,620 (3,587)
query : 1 - 2,046 (2,046/2,046)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000030105
genome : 128,639,034 - 128,642,607 (3,574)
query : 1 - 1,862 (1,862/1,862)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AB173665
genome : 128,639,466 - 128,642,585 (3,120)
query : 3 - 1,581 (1,579/1,581)
6 exons
identity = 0.996
3'(0.998;1.000;1.000;0.986;1.000;0.989)5'
coverage = 0.999
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000030106
genome : 128,646,112 - 128,653,428 (7,317)
query : 1 - 399 (399/399)
6 exons
identity = 0.958
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000058836
(
AB025904
)
genome : 128,631,532 - 128,638,686 (7,155)
query : 4 - 1,741 (1,738/1,757)
9 exons
identity = 0.947
5'(0.983;0.986;0.990;0.970;0.962;0.975;0.861;
0.936)3'
coverage = 0.998
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000038838
(
BC020590
)
genome : 128,639,016 - 128,642,606 (3,591)
query : 1 - 1,712 (1,712/1,780)
7 exons
identity = 0.981
3'(0.975;1.000;1.000;1.000;1.000;1.000;0.960)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000294282
(
CR615087
)
genome : 128,639,015 - 128,639,875 (861)
query : 1 - 859 (859/859)
1 exon
identity = 0.976
5'(0.976)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000045558
(
AK125685
)
genome : 128,639,017 - 128,641,020 (2,004)
query : 1 - 2,005 (2,005/2,005)
1 exon
identity = 0.973
3'(0.973)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000011151
(
AK027879
)
genome : 128,639,080 - 128,642,586 (3,507)
query : 1 - 1,966 (1,966/1,966)
6 exons
identity = 0.982
3'(0.979;1.000;1.000;1.000;1.000;0.965)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000010148
(
AK026874
)
genome : 128,646,089 - 128,654,685 (8,597)
query : 1 - 504 (504/519)
5 exons
identity = 0.853
5'(0.957;0.988)3'
coverage = 0.994
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig
128632407-128648406 F +
MIRm
AluSx
U13
AluSx
AluJb
LSU-rRNA_Hsa
AluSg
AluSx
AluSx
L2
AluSx
AT_rich
MIR3
GA-rich
AluSx
AluJo