bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.mulatta
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_001091104
genome : 144,062,989 - 144,153,563 (90,575)
query : 1 - 3,369 (3,369/3,369)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000022514
genome : 144,063,296 - 144,153,562 (90,267)
query : 1 - 3,061 (3,061/3,061)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AB168419
Representative transcript
genome : 144,072,142 - 144,152,976 (80,835)
query : 56 - 2,422 (2,367/2,469)
14 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.993)3'
coverage = 0.977
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000098082
Pan
sp. (Chimpanzee) : XM_525073
Pongo
sp. (Orangutan) : ENSPPYT00000000177
Mus
sp. (Mouse) : AK089989
Rattus
sp. (Rat) : XM_001067807
Canis
sp. (Dog) : XM_849606
Equus
sp. (Horse) : XM_001491325
Bos
sp. (Cow) : XR_028331
Monodelphis
sp. (Opossum) : XM_001376905
Gallus
sp. (Chicken) : AJ719426
Danio
sp. (Zebrafish) : BC124703
Danio
sp. (Zebrafish) : XM_001332951
Oryzias
sp. (Medaka) : ENSORLT00000017238
Tetraodon
sp. (Tetraodon) : GSTENT00030381001
Takifugu
sp. (Fugu) : SINFRUT00000144725
ENSMMUT00000045397
genome : 144,072,142 - 144,153,569 (81,428)
query : 1 - 2,855 (2,855/2,855)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001091234
Representative transcript
genome : 144,158,065 - 144,161,159 (3,095)
query : 1 - 1,641 (1,641/1,664)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000340103
Pan
sp. (Chimpanzee) : XM_001140733
Pongo
sp. (Orangutan) : ENSPPYT00000000178
Mus
sp. (Mouse) : AF154573
Rattus
sp. (Rat) : XM_001061956
Equus
sp. (Horse) : XM_001491266
Bos
sp. (Cow) : ENSBTAT00000047295
Monodelphis
sp. (Opossum) : XM_001376893
Oryzias
sp. (Medaka) : ENSORLT00000021759
Tetraodon
sp. (Tetraodon) : GSTENT00013398001
ENSMMUT00000007229
genome : 144,158,943 - 144,161,095 (2,153)
query : 1 - 699 (699/699)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000098082
(
BC045625
)
genome : 144,072,144 - 144,153,557 (81,414)
query : 392 - 3,325 (2,934/3,340)
14 exons
identity = 0.977
5'(1.000;0.968;1.000;1.000;0.976;1.000;1.000;
0.975;0.990;0.963;0.992;0.989;0.990;0.965)3'
coverage = 0.882
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000046050
(
AK126177
)
genome : 144,072,144 - 144,152,828 (80,685)
query : 59 - 2,170 (2,112/2,170)
13 exons
identity = 0.989
5'(1.000;0.968;1.000;0.968;1.000;1.000;0.975;
0.990;0.963;0.992;0.989;0.990;0.993)3'
coverage = 0.973
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000045563
(
AK125690
)
genome : 144,094,182 - 144,153,557 (59,376)
query : 1 - 2,336 (2,336/2,358)
9 exons
identity = 0.973
5'(1.000;0.993;0.975;0.990;0.963;0.992;0.989;
0.990;0.965)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000340103
(
BC111974
)
genome : 144,158,890 - 144,161,159 (2,270)
query : 1 - 816 (816/816)
2 exons
identity = 0.949
3'(0.972;0.930)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig
144032559-144192558 F +