bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.mulatta
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_001096845
Representative transcript
genome : 146,302,555 - 146,312,771 (10,217)
query : 1 - 2,107 (2,107/2,107)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000061687
Pan
sp. (Chimpanzee) : ENSPTRT00000003677
Pongo
sp. (Orangutan) : CR857686
Mus
sp. (Mouse) : AK077257
Rattus
sp. (Rat) : BC083727
Canis
sp. (Dog) : XM_547516
Equus
sp. (Horse) : XM_001489618
Bos
sp. (Cow) : BC103031
Monodelphis
sp. (Opossum) : XM_001367859
Gallus
sp. (Chicken) : AJ851729
Danio
sp. (Zebrafish) : BC053183
Takifugu
sp. (Fugu) : SINFRUT00000130724
ENSMMUT00000003410
genome : 146,302,557 - 146,312,716 (10,160)
query : 1 - 2,050 (2,050/2,050)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001096735
genome : 146,305,317 - 146,312,771 (7,455)
query : 1 - 1,318 (1,318/1,318)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000061687
(
AF002668
)
genome : 146,302,856 - 146,312,682 (9,827)
query : 1 - 1,352 (1,352/1,375)
4 exons
identity = 0.955
3'(0.922;0.965;0.972;0.915)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig
146299663-146315662 F +
MIR
L2
AluSg/x
Alu
AluYg
AluJo
AluSg
AluJo
AluSx
AluJo
AluSx
(CAG)n
AluSx
AluJb
AluS
AluJo
(T)n
AluSg/x
L1MB8
L1MB8
FRAM
FLAM_C
AT_rich
L1MB8
AluJo
AluSx
AluJo
AluJb
AluJo
AluSx
FAM
AluJb
FLAM_C
AluJ/FLAM
AluY
AluSx
MIRb
GC_rich
GC_rich
(CA)n
L1MC5
AluSx
AluY
L1MC5
AluMacYa3
L1MC5
AluJb