bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.mulatta
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSMMUT00000042317
genome : 35,453,488 - 35,547,398 (93,911)
query : 1 - 3,999 (3,999/3,999)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001095241
Representative transcript
genome : 35,453,489 - 35,661,176 (207,688)
query : 1 - 4,346 (4,346/4,346)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000264414
Pan
sp. (Chimpanzee) : XM_001145550
Pongo
sp. (Orangutan) : CR860813
Mus
sp. (Mouse) : AK170082
Rattus
sp. (Rat) : AY724525
Canis
sp. (Dog) : AJ388555
Equus
sp. (Horse) : XM_001917306
Bos
sp. (Cow) : BT030559
Monodelphis
sp. (Opossum) : XM_001365515
Gallus
sp. (Chicken) : ENSGALT00000023079
Danio
sp. (Zebrafish) : NM_001114686
Oryzias
sp. (Medaka) : ENSORLT00000007357
Tetraodon
sp. (Tetraodon) : GSTENT00011611001
Takifugu
sp. (Fugu) : SINFRUT00000160123
XM_001095469
genome : 35,453,489 - 35,661,105 (207,617)
query : 1 - 4,432 (4,432/4,432)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001095125
genome : 35,453,489 - 35,660,960 (207,472)
query : 1 - 4,372 (4,372/4,372)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001095351
genome : 35,453,489 - 35,660,190 (206,702)
query : 1 - 4,654 (4,654/4,654)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001094782
genome : 35,453,489 - 35,547,420 (93,932)
query : 1 - 4,125 (4,125/4,125)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001094904
genome : 35,453,489 - 35,547,420 (93,932)
query : 1 - 4,020 (4,020/4,020)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001095018
genome : 35,453,489 - 35,547,420 (93,932)
query : 1 - 4,224 (4,224/4,224)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001095581
genome : 35,453,489 - 35,546,206 (92,718)
query : 1 - 4,362 (4,362/4,362)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001094661
genome : 35,453,489 - 35,469,463 (15,975)
query : 1 - 3,837 (3,837/3,837)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000016858
genome : 35,453,505 - 35,660,210 (206,706)
query : 1 - 4,652 (4,652/4,652)
7 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000016859
genome : 35,455,201 - 35,546,024 (90,824)
query : 1 - 2,468 (2,468/2,468)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000008570
(
AK025296
)
genome : 35,453,031 - 35,454,682 (1,652)
query : 2 - 1,621 (1,620/1,653)
1 exon
identity = 0.928
3'(0.928)5'
coverage = 0.999
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000008271
(
AK024997
)
genome : 35,453,468 - 35,455,302 (1,835)
query : 1 - 1,841 (1,841/1,857)
1 exon
identity = 0.943
3'(0.943)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000264414
(
BC071585
)
genome : 35,453,468 - 35,660,210 (206,743)
query : 1 - 4,935 (4,935/4,950)
7 exons
identity = 0.959
3'(0.947;0.958;0.971;0.977;0.919;0.965)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000002755
(
AK000280
)
genome : 35,453,501 - 35,547,398 (93,898)
query : 1 - 3,989 (3,989/4,020)
5 exons
identity = 0.957
3'(0.949;0.958;0.977;0.919;0.976)5'
coverage = 0.997
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000050908
(
BC026299
)
genome : 35,515,951 - 35,516,776 (826)
query : 12 - 835 (824/863)
1 exon
identity = 0.934
3'(0.934)5'
coverage = 0.987
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000013766
(
AK057152
)
genome : 35,572,740 - 35,659,875 (87,136)
query : 1 - 2,116 (2,116/2,117)
3 exons
identity = 0.923
3'(0.938;0.915)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig
35420454-35580453 F +