bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
O.latipes
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSORLT00000020132
Representative transcript
genome : 12,928,169 - 12,959,713 (31,545)
query : 1 - 5,049 (5,049/5,049)
40 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000260465
Pan
sp. (Chimpanzee) : XM_512759
Pongo
sp. (Orangutan) : ENSPPYT00000011772
Macaca
sp. (Macaque) : XM_001111220
Mus
sp. (Mouse) : BC075715
Rattus
sp. (Rat) : XM_218411
Canis
sp. (Dog) : XM_860461
Equus
sp. (Horse) : ENSECAT00000017591
Bos
sp. (Cow) : ENSBTAT00000017759
Monodelphis
sp. (Opossum) : XM_001364361
Danio
sp. (Zebrafish) : XM_001920469
Takifugu
sp. (Fugu) : SINFRUT00000143118
H.sapiens
(Human) : HIT000500360
Pan
sp. (Chimpanzee) : XR_020222
Pongo
sp. (Orangutan) : ENSPPYT00000000169
Macaca
sp. (Macaque) : AB179174
Mus
sp. (Mouse) : AK138649
Rattus
sp. (Rat) : AF021935
Canis
sp. (Dog) : XM_858531
Equus
sp. (Horse) : XM_001490044
Bos
sp. (Cow) : ENSBTAT00000029173
Monodelphis
sp. (Opossum) : XM_001368345
Gallus
sp. (Chicken) : CR523827
Danio
sp. (Zebrafish) : BC155804
Danio
sp. (Zebrafish) : XM_691225
Tetraodon
sp. (Tetraodon) : GSTENT00018476001
Takifugu
sp. (Fugu) : SINFRUT00000181336
ENSORLT00000020133
genome : 12,928,169 - 12,959,713 (31,545)
query : 1 - 5,010 (5,010/5,010)
39 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSORLT00000020135
genome : 12,928,169 - 12,959,713 (31,545)
query : 1 - 4,767 (4,767/4,767)
37 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSORLT00000020136
genome : 12,953,477 - 12,959,713 (6,237)
query : 1 - 437 (437/444)
4 exons
identity = 0.998
3'(1.000)5'
coverage = 0.984
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSORLT00000020152
genome : 12,995,235 - 12,996,973 (1,739)
query : 1 - 1,171 (1,171/1,171)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
EF206722
Representative transcript
genome : 12,995,329 - 12,996,973 (1,645)
query : 1 - 1,077 (1,077/1,077)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.997)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000010792
Pan
sp. (Chimpanzee) : XM_514238
Pongo
sp. (Orangutan) : ENSPPYT00000000182
Macaca
sp. (Macaque) : ENSMMUT00000008117
Mus
sp. (Mouse) : AK131960
Rattus
sp. (Rat) : AY758558
Canis
sp. (Dog) : XM_547508
Equus
sp. (Horse) : XM_001915014
Monodelphis
sp. (Opossum) : XM_001376637
Danio
sp. (Zebrafish) : AF172089
Danio
sp. (Zebrafish) : BC097092
Tetraodon
sp. (Tetraodon) : GSTENT00018477001
Takifugu
sp. (Fugu) : SINFRUT00000154042
H.sapiens
(Human) : HIT000252917
Pan
sp. (Chimpanzee) : XM_001138156
Pongo
sp. (Orangutan) : ENSPPYT00000000185
Mus
sp. (Mouse) : AK131943
Rattus
sp. (Rat) : XM_001061810
Canis
sp. (Dog) : XM_849632
Bos
sp. (Cow) : XM_613627
Gallus
sp. (Chicken) : AB031398
AB113959
genome : 12,996,157 - 12,996,753 (597)
query : 1 - 338 (338/338)
2 exons
identity = 0.985
5'(0.987;0.981)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
ENSORLT00000020165
Representative transcript
genome : 13,001,588 - 13,009,707 (8,120)
query : 1 - 2,767 (2,767/2,767)
14 exons
identity = 0.997
3'(1.000;1.000;0.976;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000031521
Pan
sp. (Chimpanzee) : XM_514313
Pongo
sp. (Orangutan) : ENSPPYT00000000056
Macaca
sp. (Macaque) : AB168651
Mus
sp. (Mouse) : AK029944
Rattus
sp. (Rat) : BC072529
Canis
sp. (Dog) : XM_537222
Equus
sp. (Horse) : XM_001494036
Bos
sp. (Cow) : BC133329
Monodelphis
sp. (Opossum) : XR_030425
Gallus
sp. (Chicken) : CR407290
Danio
sp. (Zebrafish) : AY570729
Tetraodon
sp. (Tetraodon) : GSTENT00018478001
Takifugu
sp. (Fugu) : SINFRUT00000154023
scaffold127_contig55572
12956151-12962812 W +
10
12962813-12962822 N
scaffold127_contig55573
12962823-12963258 W +
25
12963259-12963283 N
scaffold127_contig55574
12963284-12968533 W +
10
12968534-12968543 N
scaffold127_contig55575
12968544-12969031 W +
526
12969032-12969557 N
scaffold127_contig55576
12969558-12977870 W +
10
12977871-12977880 N
scaffold127_contig55577
12977881-12979147 W +
97
12979148-12979244 N
scaffold127_contig55578
12979245-12980364 W +
10
12980365-12980374 N
scaffold127_contig55579
12980375-12984052 W +
10
12984053-12984062 N
scaffold127_contig55580
12984063-12986731 W +
10
12986732-12986741 N
scaffold127_contig55581
12986742-12988735 W +
365
12988736-12989100 N
scaffold127_contig55582
12989101-12989556 W +
128
12989557-12989684 N
scaffold127_contig55583
12989685-12996053 W +
10
12996054-12996063 N
scaffold127_contig55584
12996064-13011900 W +
10
13011901-13011910 N
scaffold127_contig55585
13011911-13012295 W +
164
13012296-13012459 N
scaffold127_contig55586
13012460-13016746 W +
591
13016747-13017337 N
scaffold127_contig55587
13017338-13018202 W +
43031
13018203-13036150 N