bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
P.abelii
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
CR858231
Representative transcript
genome : 22,736,605 - 22,756,600 (19,996)
query : 1 - 2,120 (2,120/2,135)
11 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;0.991;0.985;
0.993;1.000;1.000;0.986)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000425096
Pan
sp. (Chimpanzee) : XM_001142009
Macaca
sp. (Macaque) : XM_001087264
Mus
sp. (Mouse) : AK148111
Rattus
sp. (Rat) : X99267
Equus
sp. (Horse) : XM_001489714
Bos
sp. (Cow) : BC112811
Monodelphis
sp. (Opossum) : ENSMODT00000007728
Gallus
sp. (Chicken) : AY486554
Danio
sp. (Zebrafish) : AF178539
Tetraodon
sp. (Tetraodon) : CR647350
Takifugu
sp. (Fugu) : SINFRUT00000172776
NM_001131771
genome : 22,736,605 - 22,756,600 (19,996)
query : 1 - 2,120 (2,120/2,135)
11 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;0.991;0.985;
0.993;1.000;1.000;0.986)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSPPYT00000000171
genome : 22,736,604 - 22,756,600 (19,997)
query : 1 - 2,121 (2,121/2,121)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSPPYT00000000172
genome : 22,736,831 - 22,752,102 (15,272)
query : 1 - 1,763 (1,763/1,763)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.988)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000046339
(
AK126466
)
genome : 22,643,469 - 22,735,085 (91,617)
query : 21 - 5,524 (5,504/5,524)
22 exons
identity = 0.953
3'(0.943)5'
coverage = 0.996
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000043853
(
AK123980
)
genome : 22,728,650 - 22,735,820 (7,171)
query : 1 - 2,826 (2,826/2,831)
3 exons
identity = 0.946
3'(0.944;0.944;0.950)5'
coverage = 0.998
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000032787
(
BC006365
)
genome : 22,736,605 - 22,761,453 (24,849)
query : 1 - 2,486 (2,486/2,508)
13 exons
identity = 0.934
3'(0.937;0.975;1.000;0.988;0.980;0.977;0.971;
0.993;0.972;0.981;0.698;0.957;0.985)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig595.64
22726602-22726673 W -
737
22726674-22727410 N
Contig595.63
22727411-22755217 W -
77
22755218-22755294 N
Contig595.62
22755295-22766601 W -