bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
P.abelii
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
CR860643
genome : 39,870,348 - 39,885,918 (15,571)
query : 1 - 3,637 (3,637/3,685)
10 exons
identity = 0.995
5'(0.977;0.944;1.000;0.992;1.000;1.000;0.995;
0.996;1.000;0.996)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
NM_001133139
genome : 39,870,348 - 39,885,918 (15,571)
query : 1 - 3,637 (3,637/3,685)
10 exons
identity = 0.995
5'(0.977;0.944;1.000;0.992;1.000;1.000;0.995;
0.996;1.000;0.996)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSPPYT00000013260
genome : 39,870,348 - 39,885,918 (15,571)
query : 1 - 3,635 (3,635/3,635)
10 exons
identity = 0.998
5'(0.983;0.944;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000021696
(
AK096841
)
genome : 39,866,056 - 39,884,756 (18,701)
query : 1 - 2,777 (2,777/2,777)
11 exons
identity = 0.978
5'(1.000;1.000;0.992;0.995;1.000;0.973;0.981;
0.975;0.970)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000052766
(
BC042954
)
genome : 39,866,685 - 39,884,759 (18,075)
query : 1 - 2,512 (2,512/2,527)
10 exons
identity = 0.977
5'(1.000;1.000;0.992;0.995;1.000;0.973;0.981;
0.975;0.970)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000003010
(
AK000535
)
genome : 39,885,022 - 39,885,911 (890)
query : 1 - 891 (891/911)
1 exon
identity = 0.983
5'(0.983)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig3107.4
39870133-39873740 W +
10
39873741-39873750 N
Contig3107.5
39873751-39886132 W +
MIRm
FRAM
AluYc3
AluSg/x
AluSx
GA-rich
L2b
MER33
MIRb
L2a
L1ME3
MIRc
MIRb
AT_rich
MIRb
MADE2