bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
T.rubripes
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
SINFRUT00000127559
Representative transcript
genome : 196,793,442 - 196,795,593 (2,152)
query : 1 - 1,425 (1,425/1,425)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000281438
Pan
sp. (Chimpanzee) : XM_521506
Pongo
sp. (Orangutan) : ENSPPYT00000002836
Macaca
sp. (Macaque) : XM_001107414
Mus
sp. (Mouse) : AK034133
Rattus
sp. (Rat) : BC078678
Canis
sp. (Dog) : XM_546152
Equus
sp. (Horse) : ENSECAT00000022271
Bos
sp. (Cow) : ENSBTAT00000001110
Monodelphis
sp. (Opossum) : XM_001380243
Danio
sp. (Zebrafish) : XM_001921888
Oryzias
sp. (Medaka) : ENSORLT00000014372
Tetraodon
sp. (Tetraodon) : GSTENT00030787001
SINFRUT00000178536
Representative transcript
genome : 196,796,490 - 196,802,859 (6,370)
query : 1 - 1,708 (1,708/1,708)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.984;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000191128
Pan
sp. (Chimpanzee) : XM_507840
Pongo
sp. (Orangutan) : CR861454
Macaca
sp. (Macaque) : AB171003
Mus
sp. (Mouse) : AK167902
Rattus
sp. (Rat) : BC061759
Canis
sp. (Dog) : XM_856497
Equus
sp. (Horse) : XM_001503764
Bos
sp. (Cow) : BC105409
Monodelphis
sp. (Opossum) : XM_001365272
Gallus
sp. (Chicken) : AF108656
Danio
sp. (Zebrafish) : AF108655
Oryzias
sp. (Medaka) : ENSORLT00000014344
Tetraodon
sp. (Tetraodon) : CR686651
H.sapiens
(Human) : HIT000394685
Macaca
sp. (Macaque) : XM_001118799
Mus
sp. (Mouse) : AK078699
Rattus
sp. (Rat) : ENSRNOT00000009193
Canis
sp. (Dog) : ENSCAFT00000022934
Equus
sp. (Horse) : ENSECAT00000014142
Bos
sp. (Cow) : BC149798
SINFRUT00000127555
genome : 196,800,018 - 196,802,849 (2,832)
query : 1 - 516 (516/516)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
SINFRUT00000127549
Representative transcript
genome : 196,807,517 - 196,810,984 (3,468)
query : 1 - 1,992 (1,992/1,992)
6 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000326966
Pan
sp. (Chimpanzee) : XM_001170994
Pongo
sp. (Orangutan) : CR860796
Macaca
sp. (Macaque) : XM_001111981
Mus
sp. (Mouse) : AK034817
Rattus
sp. (Rat) : M94287
Canis
sp. (Dog) : ENSCAFT00000016004
Equus
sp. (Horse) : ENSECAT00000026677
Bos
sp. (Cow) : BC122662
Monodelphis
sp. (Opossum) : XM_001379056
Gallus
sp. (Chicken) : XM_421630
Danio
sp. (Zebrafish) : BC048067
scaffold_125
196791674-196807673 D +
NCBI