H-InvDB x AHG DB
Protein view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv protein ID: HIP000003269 Last modified: 27-May-2015
Definition: Similar to Golgi resident protein GCP60; Acyl-CoA-binding domain-containing protein 3; Golgi complex-associated protein 1; GOCAP1; Golgi phosphoprotein 1; GOLPH1; PBR- and PKA-associated protein 7; Peripheral benzodiazepine receptor-associated protein PAP7;
[Summery][Full]
[Protein Info][Member][Motif] 
provide location, ID and descriptions of functional motifs (InterPro)[Function] 
provide human-curated functional definition, similarity
category and related evidences;  Gene name; 
HUGO gene symbols; GO term; EC number; pathway information (KEGG)[PTM][Subcellular loc.] 
provide subcellular localization prediction by WolfPSORT, Target P, SOSUI, TMHMM and PTS1[Protein Structure][Evolutionary info.] 
provide orthologs relationships, phylogenic trees and sequence alignments[Polymorphism/repeat] 
provide polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information

Protein information
HIP ID HIP000003269
Length 360
Codon Adaptation Index (CAI). 0.749
Database links RefSeq NA
UniProt NA
CCDS NA
Original transcript information
Representative H-Inv transcript ID Transcript view HIT000093469
H-Inv cluster ID Locus view HIX0001643
Predicted CDS 1..1083 ; 360[aa] ; Orientation:+1 ;
Genomic location Chromosome 1
Location 1q42.12
CDS position 226332381-226352554
Strand -
Accession number BC034563.2
CAGE tag ID NA
EST ID NA
Clone Number IMAGE:3858463
Experimental resources NBRC: NITE Biological Resource Center NBRC     Antibody: searching human antibodies at "BIO-kaimono.com" Antibody (ACBD3) ;   Catalog: searching experimental product catalogs at "BIO-kaimono.com" Catalog (ACBD3) ;
Length of cDNA 3037[bp] (No. of exon:6)[A:962 T:930 G:626 C:519] ;
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:64746 ;
KEGG GENES KEGG GENES(64746) ;
GeneCard GeneCard ACBD3 ;
etc H-GOLD Human-Gene diversity Of Life-style related Diseases ;
Protein view


Coresponding transcript member (s)
No.1
H-Inv IDTranscript view HIT000093469
H-Inv cluster IDLocus view HIX0001643
Accession numberBC034563.2
CAGE tag IDNA
EST IDNA
Coding potential Help Protein coding
DefinitionSimilar to Golgi resident protein GCP60; Acyl-CoA-binding domain-containing protein 3; Golgi complex-associated protein 1; GOCAP1; Golgi phosphoprotein 1; GOLPH1; PBR- and PKA-associated protein 7; Peripheral benzodiazepine receptor-associated protein PAP7;
Similarity category HelpSimilar to known protein(Category II).
Similar to known protein (Q9H3P7) [Identity/coverage = 100.0%/68.18%] to Homo sapiens (Human). protein.
Transcript feature Help NA
Genomic Location G-integra Help Chromosome1
Location1q42.12
CDS position226332381-226352554
Strand-
Gene structure6 exons

Motif information in predicted CDS
ORF

length(361),orf(1:1083)
CHLFSTYVASHKIEKEEQEKKRKEEEERRRREEEERERLQKEEEKRRREE
EERLRREEEERRRIEEERLRLEQQKQQIMAALNSQTAVQFQQYAAQQYPG
NYEQQQILIRQLQEQHYQQYMQQLYQVQLAQQQAALQKQQEVVVAGSSLP
TSSKVNATVPSNMMSVNGQAKTHTDSSEKELEPEAAEEALENGPKESLPV
IAAPSMWTRPQIKDFKEKIQQDADSVITVGRGEVVTVRVPTHEEGSYLFW
EFATDNYDIGFGVYFEWTDSPNTAVSVHVSESSDDDEEEEENIGCEEKAK
KNANKPLLDEIVPVYRRDCHEEVYAGSHQYPGRGVYLLKFDNSYSLWRSK
SVYYRVYYTR*
a.a.
length
InterPro Name
length(143), motif(216:358) 143IPR009038GOLD [Domain]
length(55), motif(222:276) 55IPR009038GOLD [Domain]
length(131), motif(229:359) 131IPR009038GOLD [Domain]
length(53), motif(307:359) 53IPR009038GOLD [Domain]

Protein function information
H-Inv protein ID HIP000003269
Representative H-Inv transcript ID Transcript view HIT000093469
H-Inv cluster ID Locus view HIX0001643
Definition Similar to Golgi resident protein GCP60; Acyl-CoA-binding domain-containing protein 3; Golgi complex-associated protein 1; GOCAP1; Golgi phosphoprotein 1; GOLPH1; PBR- and PKA-associated protein 7; Peripheral benzodiazepine receptor-associated protein PAP7;
Similarity category Help Similar to known protein(Category II).
Similar to known protein (Q9H3P7) [Identity/coverage = 100.0%/68.18%] to Homo sapiens (Human). protein.
Gene family/group H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
EC number NA
KEGG metabolic pathway NA
Protein-protein interaction (PPI) PPI viewer No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
UniProt NA
CCDS NA
Gene symbol/name HGNC symbol ACBD3
HGNC aliases "golgi complex associated protein 1, 60kDa", "acyl-Coenzyme A binding domain containing 3";
HGNC name acyl-CoA binding domain containing 3;
Related H-InvDB links G-integraG-integra ; PPI viewer PPI view ; TACT TACT ;

Glycosylation
GPDB (GlycoProtDB)
GPDB
ID NA
Protein name NA
Organism NA
Length(aa) NA

Subcellular localization information
WoLF PSORT nuclear;
Target P Other
SOSUI soluble protein
TMHMM soluble protein
PTS1 Not targeted
Related H-InvDB links LIFEdb LIFEdb; 
JRE-1.4.0 or later is required. Download JRE at Sun's web site.

Translation polymorphism (SNP) and microsatellite (STR) information

Single Nucleotide Polymorphism (SNP) and indel VaryGene
Location Variation dbSNP ID Strand CDS/UTR Translation
48..48 A/G rs149088607 - CDS Synonymous[Glu16Glu]
56^57 -/C rs111701159 - CDS
57..57 A/C rs2306120 - CDS Nonsynonymous[Glu19Asp]
75..75 A/T rs9730340 - CDS Nonsynonymous[Glu25Asp]
136..136 C/T/G rs112143123 - CDS
137..137 G/A rs147538215 - CDS Nonsynonymous[Arg46His]
159..159 G/C rs191893895 - CDS Nonsynonymous[Arg53Ser]
181..181 A/C rs78919255 - CDS Synonymous[Arg61Arg]
182..182 G/C rs77727776 - CDS Nonsynonymous[Arg61Thr]
188..188 G/A rs145831627 - CDS Nonsynonymous[Arg63Gln]
204..204 G/C rs149848847 - CDS Nonsynonymous[Arg68Ser]
262..262 G/A rs200702189 - CDS Nonsynonymous[Val88Met]
285..285 C/T rs149492799 - CDS Synonymous[Ala95Ala]
369..369 G/A rs180969293 - CDS Synonymous[Gln123Gln]
393..393 G/A rs141482742 - CDS Synonymous[Gln131Gln]
422..422 A/G rs137989799 - CDS Nonsynonymous[Glu141Gly]
439..439 T/G rs199935319 - CDS Nonsynonymous[Ser147Ala]
472..472 A/C rs186444053 - CDS Nonsynonymous[Thr158Pro]
488..488 T/C rs141535126 - CDS Nonsynonymous[Met163Thr]
560..560 A/G rs144925748 - CDS Nonsynonymous[Glu187Gly]
563..563 A/C rs143544007 - CDS Nonsynonymous[Glu188Ala]
580..580 C/T rs199621655 - CDS Nonsynonymous[Pro194Ser]
584..584 A/G rs189746293 - CDS Nonsynonymous[Lys195Arg]
669..669 A/T rs201230026 - CDS Synonymous[Ala223Ala]
673..673 T/G rs148868431 - CDS Nonsynonymous[Ser225Ala]
675..675 C/T rs114674626 - CDS Synonymous[Ser225Ser]
726..726 T/C rs200054927 - CDS Synonymous[His242His]
741..741 T/C rs147875428 - CDS Synonymous[Tyr247Tyr]
767..767 A/G rs150683627 - CDS Nonsynonymous[Asn256Ser]
774..774 C/T rs149458367 - CDS Synonymous[Asp258Asp]
784..784 G/A rs142934805 - CDS Nonsynonymous[Gly262Arg]
786..786 G/A rs201959552 - CDS Synonymous[Gly262Gly]
861..861 G/C rs201638495 - CDS Nonsynonymous[Glu287Asp]
879..879 C/T rs146216214 - CDS Synonymous[Ile293Ile]
914..914 A/G rs17855715 - CDS Nonsynonymous[Lys305Arg]
966..966 G/T rs3211100 + CDS Nonsynonymous[Glu322Asp]
1027..1027 T/C rs113333885 - CDS Nonsynonymous[Ser343Pro]
Microsatellite (Short Tandem Repeat, STR)
LocationVariationStrand
No data available
Related H-InvDB links
VaryGeneVaryGene ;