H-InvDB x AHG DB
Protein view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv protein ID: HIP000025199 Last modified: 27-May-2015
Definition: U5 small nuclear ribonucleoprotein 200 kDa helicase; EC=3.6.4.13; Activating signal cointegrator 1 complex subunit 3-like 1; BRR2 homolog; U5 snRNP-specific 200 kDa protein; U5-200KD;
[Summery][Full]
[Protein Info][Member][Motif] 
provide location, ID and descriptions of functional motifs (InterPro)[Function] 
provide human-curated functional definition, similarity
category and related evidences;  Gene name; 
HUGO gene symbols; GO term; EC number; pathway information (KEGG)[PTM][Subcellular loc.] 
provide subcellular localization prediction by WolfPSORT, Target P, SOSUI, TMHMM and PTS1[Protein Structure][Evolutionary info.] 
provide orthologs relationships, phylogenic trees and sequence alignments[Polymorphism/repeat] 
provide polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information

Protein information
HIP ID HIP000025199
Length 2136
Codon Adaptation Index (CAI). 0.801
Database links RefSeq NA
UniProt NA
CCDS NA
Original transcript information
Representative H-Inv transcript ID Transcript view HIT000255549
H-Inv cluster ID Locus view HIX0002273
Predicted CDS 79..6489 ; 2136[aa] ; Orientation:+1 ;
Genomic location Chromosome 2
Location 2q11.2
CDS position 96940470-96971253
Strand -
Accession number AY572488.1
CAGE tag ID NA
EST ID NA
Clone Number NA
Experimental resources NBRC: NITE Biological Resource Center NBRC     Antibody: searching human antibodies at "BIO-kaimono.com" Antibody (SNRNP200) ;   Catalog: searching experimental product catalogs at "BIO-kaimono.com" Catalog (SNRNP200) ;
Length of cDNA 6769[bp] (No. of exon:45)[A:1703 T:1516 G:1834 C:1716] ;
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:23020 ;
KEGG GENES KEGG GENES(23020) ;
GeneCard GeneCard SNRNP200 ;
etc H-GOLD Human-Gene diversity Of Life-style related Diseases ;
Protein view