H-InvDB x AHG DB
Protein view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv protein ID: HIP000030739 Last modified: 27-May-2015
Definition: Similar to Protein RRP5 homolog.
[Summery][Full]
[Protein Info][Member][Motif] 
provide location, ID and descriptions of functional motifs (InterPro)[Function] 
provide human-curated functional definition, similarity
category and related evidences;  Gene name; 
HUGO gene symbols; GO term; EC number; pathway information (KEGG)[PTM][Subcellular loc.] 
provide subcellular localization prediction by WolfPSORT, Target P, SOSUI, TMHMM and PTS1[Protein Structure][Evolutionary info.] 
provide orthologs relationships, phylogenic trees and sequence alignments[Polymorphism/repeat] 
provide polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information

Motif information in predicted CDS
ORF

length(1434),orf(81:4384)
MANLEESFPRGGTRKIHKPEKAFQQSVEQDNLFDISTEEGSTKRKKSQKG
PAKTKKLKIEKRESSKSAREKFEILSVESLCEGMRILGCVKEVNELELVI
SLPNGLQGFVQVTEICDAYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVR
CVVSSLGITDRGKKSVKLSLNPKNVNRVLSAEALKPGMLLTGTVSSLEDH
GYLVDIGVDGTRAFLPLLKAQEYIRQKNKGAKLKVGQYLNCIVEKVKGNG
GVVSLSVGHSEVSTAIATEQQSWNLNNLLPGLVVKAQVQKVTPFGLTLNF
LTFFTGVVDFMHLDPKKAGTYFSNQAVRACILCVHPRTRVVHLSLRPIFL
QPGRPLTRLSCQNLGAVLDDVPVQGFFKKAGATFRLKDGVLAYARLSHLS
DSKNVFNPEAFKPGNTHKCRIIDYSQMDELALLSLRTSIIEAQYLRYHDI
EPGAVVKGTVLTIKSYGMLVKVGEQMRGLVPPMHLADILMKNPEKKYHIG
DEVKCRVLLCDPEAKKLMMTLKKTLIESKLPVITCYADAKPGLQTHGFII
RVKDYGCIVKFYNNVQGLVPKHELSTEYIPDPERVFYTGQVVKVVVLNCE
PSKERMLLSFKLSSDPEPKKEPAGHSQKKGKAINIGQLVDVKVLEKTKDG
LEVAVLPHNIRAFLPTSHLSDHVANGPLLHHWLQAGDILHRVLCLSQSEG
RVLLCRKPALVSTVEGGQDPKNFSEIHPGMLLIGFVKSIKDYGVFIQFPS
GLSGLAPKAIMSDKFVTSTSDHFVEGQTVAAKVTNVDEEKQRMLLSLRLS
DCGLGDLAITSLLLLNQCLEELQGVRSLMSNRDSVLIQTLAEMTPGMFLD
LVVQEVLEDGSVVFSGGPVPDLVLKASRYHRAGQEVESGQKKKVVILNVD
LLKLEVHVSLHQDLVNRKARKLRKGSEHQAIVQHLEKSFAIASLVETGHL
AAFSLTSHLNDTFRFDSEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAK
RTMRPTQKDSETVDEDEEVDPALTVGTIKKHTLSIGDMVTGTVKSIKPTH
VVVTLEDGIIGCIHASHILDDVPEGTSPTTKLKVGKTVTARVIGGRDMKT
FKYLPISHPRFVRTIPELSVRPSELEDGHTALNTHSVSPMEKIKQYQAGQ
TVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRVG
QALRATVVGPDSSKTFLCLSLTGPHKLEEGEVAMGRVVKVTPNEGLTVSF
PFGKIGTVSIFHMSDSYSETPLEDFVPQKVVRCYILSTADNVLTLSLRSS
RTNPETKSKVEDPEINSIQDIKEGQLLRGYVGSIQPHGVFFRLGPSVVGL
ARYSHVSQHSPSKKALYNKHLPEGKLLTARVLRLNHQKNLVELSFLPGDT
GKPDVLSASLEGQLTKQEERKTEAEERDQKKKKK
a.a.
length
InterPro Name
length(102), motif(73:174) 102IPR012340Nucleic acid-binding, OB-fold [Domain]
length(100), motif(76:175) 100IPR012340Nucleic acid-binding, OB-fold [Domain]
length(91), motif(81:171) 91IPR022967RNA-binding domain, S1 [Domain]
length(89), motif(83:171) 89IPR003029Ribosomal protein S1, RNA-binding domain [Domain]
length(116), motif(168:283) 116IPR012340Nucleic acid-binding, OB-fold [Domain]
length(82), motif(179:260) 82IPR012340Nucleic acid-binding, OB-fold [Domain]
length(73), motif(185:257) 73IPR003029Ribosomal protein S1, RNA-binding domain [Domain]
length(74), motif(185:258) 74IPR022967RNA-binding domain, S1 [Domain]
length(72), motif(187:258) 72IPR003029Ribosomal protein S1, RNA-binding domain [Domain]
length(87), motif(267:353) 87IPR012340Nucleic acid-binding, OB-fold [Domain]
length(79), motif(270:348) 79IPR012340Nucleic acid-binding, OB-fold [Domain]
length(68), motif(279:346) 68IPR022967RNA-binding domain, S1 [Domain]
length(66), motif(281:346) 66IPR003029Ribosomal protein S1, RNA-binding domain [Domain]
length(74), motif(363:436) 74IPR022967RNA-binding domain, S1 [Domain]
length(72), motif(365:436) 72IPR003029Ribosomal protein S1, RNA-binding domain [Domain]
length(89), motif(441:529) 89IPR012340Nucleic acid-binding, OB-fold [Domain]
length(80), motif(445:524) 80IPR012340Nucleic acid-binding, OB-fold [Domain]
length(72), motif(451:522) 72IPR003029Ribosomal protein S1, RNA-binding domain [Domain]
length(72), motif(451:522) 72IPR022967RNA-binding domain, S1 [Domain]
length(70), motif(453:522) 70IPR003029Ribosomal protein S1, RNA-binding domain [Domain]
length(84), motif(534:617) 84IPR012340Nucleic acid-binding, OB-fold [Domain]
length(80), motif(536:615) 80IPR012340Nucleic acid-binding, OB-fold [Domain]
length(72), motif(540:611) 72IPR022967RNA-binding domain, S1 [Domain]
length(70), motif(542:611) 70IPR003029Ribosomal protein S1, RNA-binding domain [Domain]
length(64), motif(547:610) 64IPR003029Ribosomal protein S1, RNA-binding domain [Domain]
length(84), motif(627:710) 84IPR012340Nucleic acid-binding, OB-fold [Domain]
length(80), motif(631:710) 80IPR012340Nucleic acid-binding, OB-fold [Domain]
length(74), motif(634:707) 74IPR022967RNA-binding domain, S1 [Domain]
length(72), motif(636:707) 72IPR003029Ribosomal protein S1, RNA-binding domain [Domain]
length(83), motif(719:801) 83IPR012340Nucleic acid-binding, OB-fold [Domain]
length(78), motif(721:798) 78IPR012340Nucleic acid-binding, OB-fold [Domain]
length(72), motif(727:798) 72IPR022967RNA-binding domain, S1 [Domain]
length(71), motif(728:798) 71IPR003029Ribosomal protein S1, RNA-binding domain [Domain]
length(70), motif(729:798) 70IPR003029Ribosomal protein S1, RNA-binding domain [Domain]
length(68), motif(844:911) 68IPR022967RNA-binding domain, S1 [Domain]
length(76), motif(1029:1104) 76IPR012340Nucleic acid-binding, OB-fold [Domain]
length(63), motif(1032:1094) 63IPR012340Nucleic acid-binding, OB-fold [Domain]
length(76), motif(1034:1109) 76IPR022967RNA-binding domain, S1 [Domain]
length(61), motif(1035:1095) 61IPR003029Ribosomal protein S1, RNA-binding domain [Domain]
length(74), motif(1036:1109) 74IPR003029Ribosomal protein S1, RNA-binding domain [Domain]
length(87), motif(1136:1222) 87IPR012340Nucleic acid-binding, OB-fold [Domain]
length(79), motif(1143:1221) 79IPR012340Nucleic acid-binding, OB-fold [Domain]
length(76), motif(1147:1222) 76IPR022967RNA-binding domain, S1 [Domain]
length(74), motif(1149:1222) 74IPR003029Ribosomal protein S1, RNA-binding domain [Domain]
length(88), motif(1225:1312) 88IPR012340Nucleic acid-binding, OB-fold [Domain]
length(77), motif(1226:1302) 77IPR012340Nucleic acid-binding, OB-fold [Domain]
length(71), motif(1228:1298) 71IPR022967RNA-binding domain, S1 [Domain]
length(69), motif(1230:1298) 69IPR003029Ribosomal protein S1, RNA-binding domain [Domain]
length(91), motif(1305:1395) 91IPR012340Nucleic acid-binding, OB-fold [Domain]
length(89), motif(1310:1398) 89IPR012340Nucleic acid-binding, OB-fold [Domain]
length(75), motif(1322:1396) 75IPR022967RNA-binding domain, S1 [Domain]
length(73), motif(1324:1396) 73IPR003029Ribosomal protein S1, RNA-binding domain [Domain]