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Transcript view Locus view G-integra DiseaseInfo Viewer H-ANGEL Evola PPI view Gene Family/Group Hyperlink MS |
H-Inv protein ID: | HIP000030803 | Last modified: | 27-May-2015 |
Definition: | Heterogeneous nuclear ribonucleoprotein R; hnRNP R; |
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Coresponding transcript member (s) |
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No. | 1 | |
H-Inv ID | HIT000030422_03 | |
H-Inv cluster ID | HIX0213791 | |
Accession number | BC001449.2 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Heterogeneous nuclear ribonucleoprotein R; hnRNP R; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (O43390) [Identity/coverage = 99.528%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | Representative transcript; Splicing isoform; | |
Genomic Location | Chromosome | 1 |
Location | 1p36.12 | |
CDS position | 23636276-23670803 | |
Strand | - | |
Gene structure | 11 exons |
Protein function information |
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H-Inv protein ID | HIP000030803 | |
Representative H-Inv transcript ID | HIT000030422_03 | |
H-Inv cluster ID | HIX0213791 | |
Definition | Heterogeneous nuclear ribonucleoprotein R; hnRNP R; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (O43390) [Identity/coverage = 99.528%/100.0%] to Homo sapiens (Human). protein. | ||
Gene family/group | H-Inv gene family/group ID | NA |
Gene family/group name | NA | |
Evidence motif (InterPro) ID | NA | |
EC number | NA | |
KEGG metabolic pathway | NA | |
Protein-protein interaction (PPI) | No. of interaction | 24 |
Interaction partner(s) | HIP000007989; HIP000023587; HIP000024702; HIP000024702; HIP000027819; HIP000027819; HIP000030029; HIP000030029; HIP000040680; HIP000057536; HIP000060266; HIP000063360; HIP000071861; HIP000078197; HIP000078197; HIP000079240; HIP000085548; HIP000089618; HIP000092247; HIP000092247; HIP000100089; HIP000166562; HIP000168212; HIP000192131; | |
BIND | NA | |
DIP | 113389E; 131722E; 131894E; 131915E; 132227E; 132267E; 144760E; | |
MINT | MINT-5205872; MINT-65366; MINT-65367; MINT-65368; MINT-7945693; MINT-8076071; MINT-8110455; | |
HPRD | 00535; 00589; 01095; 01809; 02740; 02877; 03144; 03465; 04227; 04340; 04746; 05496; 07601; 14358; 16246; | |
IntAct | NA | |
Database links | RefSeq | NA |
UniProt | ||
CCDS | ||
Gene symbol/name | HGNC symbol | NA |
HGNC aliases | NA | |
HGNC name | NA | |
Related H-InvDB links | G-integra ; PPI view ; TACT ; |
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Evolutionary information |
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Relationship | Species | Accession number | MGI | Links |
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Orthology | Mus sp. (Mouse) | AK147043 | MGI:3572161 | G-integra |
Orthology | Danio sp. (Zebrafish) | BC056750 | G-integra | |
Orthology | Bos sp. (Cow) | BC133299 | G-integra | |
Orthology | Pongo sp. (Orangutan) | CR860678 | G-integra | |
Orthology | Canis sp. (Dog) | ENSCAFT00000021145 | G-integra | |
Orthology | Macaca sp. (Macaque) | ENSMMUT00000015348 | G-integra | |
Orthology | Monodelphis sp. (Opossum) | ENSMODT00000020522 | G-integra | |
Orthology | Oryzias sp. (Medaka) | ENSORLT00000003124 | G-integra | |
Orthology | Rattus sp. (Rat) | ENSRNOT00000016001 | G-integra | |
Orthology | Tetraodon sp. (Tetraodon) | GSTENT00032611001 | G-integra | |
Orthology | Takifugu sp. (Fugu) | SINFRUT00000157216 | G-integra | |
Orthology | Equus sp. (Horse) | XM_001501425 | G-integra | |
Orthology | Pan sp. (Chimpanzee) | XM_513191 | G-integra |
Phylogenetic tree [View by ATV] | TNeighbor-joining (phb) |
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Related H-InvDB links | Evola; dN/dS; |
Translation polymorphism (SNP) and microsatellite (STR) information |
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