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Transcript view Locus view G-integra DiseaseInfo Viewer H-ANGEL Evola PPI view Gene Family/Group Hyperlink MS |
H-Inv protein ID: | HIP000033192 | Last modified: | 27-May-2015 |
Definition: | Histone H3.3; |
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Coresponding transcript member (s) |
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No. | 1 | |
H-Inv ID | HIT000030154 | |
H-Inv cluster ID | HIX0014187 | |
Accession number | BC001124.2 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 17 |
Location | 17q25.1 | |
CDS position | 73774331-73775844 | |
Strand | - | |
Gene structure | 4 exons |
No. | 2 | |
H-Inv ID | HIT000032877 | |
H-Inv cluster ID | HIX0014187 | |
Accession number | BC006497.2 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 17 |
Location | 17q25.1 | |
CDS position | 73774102-73775844 | |
Strand | - | |
Gene structure | 4 exons |
No. | 3 | |
H-Inv ID | HIT000035969 | |
H-Inv cluster ID | HIX0014187 | |
Accession number | BC012813.2 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 17 |
Location | 17q25.1 | |
CDS position | 73774102-73775844 | |
Strand | - | |
Gene structure | 4 exons |
No. | 4 | |
H-Inv ID | HIT000038047 | |
H-Inv cluster ID | HIX0014187 | |
Accession number | BC017558.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 17 |
Location | 17q25.1 | |
CDS position | 73774104-73775848 | |
Strand | - | |
Gene structure | 4 exons |
No. | 5 | |
H-Inv ID | HIT000040748 | |
H-Inv cluster ID | HIX0001642 | |
Accession number | BC029405.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | Splicing isoform; | |
Genomic Location | Chromosome | 1 |
Location | 1q42.12 | |
CDS position | 226250426-226259415 | |
Strand | + | |
Gene structure | 4 exons |
No. | 6 | |
H-Inv ID | HIT000050043 | |
H-Inv cluster ID | HIX0014187 | |
Accession number | AK130772.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 17 |
Location | 17q25.1 | |
CDS position | 73773523-73775860 | |
Strand | - | |
Gene structure | 4 exons |
No. | 7 | |
H-Inv ID | HIT000052107 | |
H-Inv cluster ID | HIX0024209 | |
Accession number | BC038989.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 2 |
Location | 2q31.1 | |
CDS position | 175584617-175585568 | |
Strand | + | |
Gene structure | 1 exons |
No. | 8 | |
H-Inv ID | HIT000054194 | |
H-Inv cluster ID | HIX0014187 | |
Accession number | BX537379.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | Representative transcript; Splicing isoform; | |
Genomic Location | Chromosome | 17 |
Location | 17q25.1 | |
CDS position | 73772516-73775860 | |
Strand | - | |
Gene structure | 4 exons |
No. | 9 | |
H-Inv ID | HIT000055927 | |
H-Inv cluster ID | HIX0014187 | |
Accession number | BX647280.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 17 |
Location | 17q25.1 | |
CDS position | 73773541-73775859 | |
Strand | - | |
Gene structure | 4 exons |
No. | 10 | |
H-Inv ID | HIT000074274 | |
H-Inv cluster ID | HIX0014187 | |
Accession number | AF218029.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 17 |
Location | 17q25.1 | |
CDS position | 73773522-73775840 | |
Strand | - | |
Gene structure | 4 exons |
No. | 11 | |
H-Inv ID | HIT000194111 | |
H-Inv cluster ID | HIX0001642 | |
Accession number | M11353.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | Splicing isoform; | |
Genomic Location | Chromosome | 1 |
Location | 1q42.12 | |
CDS position | 226251678-226259702 | |
Strand | + | |
Gene structure | 3 exons |
No. | 12 | |
H-Inv ID | HIT000194112 | |
H-Inv cluster ID | HIX0001642 | |
Accession number | M11354.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | Representative transcript; Splicing isoform; | |
Genomic Location | Chromosome | 1 |
Location | 1q42.12 | |
CDS position | 226250427-226259702 | |
Strand | + | |
Gene structure | 4 exons |
No. | 13 | |
H-Inv ID | HIT000262322 | |
H-Inv cluster ID | HIX0024209 | |
Accession number | BC066901.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 2 |
Location | 2q31.1 | |
CDS position | 175584532-175585568 | |
Strand | + | |
Gene structure | 1 exons |
No. | 14 | |
H-Inv ID | HIT000262725 | |
H-Inv cluster ID | HIX0024209 | |
Accession number | BC067757.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | Representative transcript; | |
Genomic Location | Chromosome | 2 |
Location | 2q31.1 | |
CDS position | 175584528-175585568 | |
Strand | + | |
Gene structure | 1 exons |
No. | 15 | |
H-Inv ID | HIT000265934 | |
H-Inv cluster ID | HIX0024209 | |
Accession number | BC081560.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 2 |
Location | 2q31.1 | |
CDS position | 175584535-175585568 | |
Strand | + | |
Gene structure | 1 exons |
No. | 16 | |
H-Inv ID | HIT000335240 | |
H-Inv cluster ID | HIX0001642 | |
Accession number | BC095447.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 1 |
Location | 1q42.12 | |
CDS position | 226250426-226259494 | |
Strand | + | |
Gene structure | 4 exons |
No. | 17 | |
H-Inv ID | HIT000339105 | |
H-Inv cluster ID | HIX0014187 | |
Accession number | BC108701.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 17 |
Location | 17q25.1 | |
CDS position | 73774104-73775823 | |
Strand | - | |
Gene structure | 4 exons |
No. | 18 | |
H-Inv ID | HIT000430771 | |
H-Inv cluster ID | HIX0001642 | |
Accession number | AK311905.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 1 |
Location | 1q42.12 | |
CDS position | 226250408-226259180 | |
Strand | + | |
Gene structure | 4 exons |
Motif information in predicted CDS |
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a.a. length |
InterPro | Name |
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136 | IPR000164 | Histone H3/CENP-A [Family] | |
132 | IPR009072 | Histone-fold [Domain] | |
133 | IPR009072 | Histone-fold [Domain] | |
15 | IPR000164 | Histone H3/CENP-A [Family] | |
7 | IPR000164 | Histone H3/CENP-A [Family] | |
15 | IPR000164 | Histone H3/CENP-A [Family] | |
22 | IPR000164 | Histone H3/CENP-A [Family] | |
103 | IPR000164 | Histone H3/CENP-A [Family] | |
18 | IPR000164 | Histone H3/CENP-A [Family] | |
75 | IPR007125 | Histone core [Domain] | |
9 | IPR000164 | Histone H3/CENP-A [Family] | |
19 | IPR000164 | Histone H3/CENP-A [Family] | |
17 | IPR000164 | Histone H3/CENP-A [Family] | |
22 | IPR000164 | Histone H3/CENP-A [Family] |
Protein function information |
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H-Inv protein ID | HIP000033192 | |
Representative H-Inv transcript ID | HIT000054194 | |
H-Inv cluster ID | HIX0014187 | |
Definition | Histone H3.3; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (P84243) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Gene family/group | H-Inv gene family/group ID | NA |
Gene family/group name | NA | |
Evidence motif (InterPro) ID | NA | |
EC number | NA | |
KEGG metabolic pathway | NA | |
Protein-protein interaction (PPI) | No. of interaction | 1 |
Interaction partner(s) | HIP000093951; | |
BIND | 199712; 199713; 199985; 199986; 199987; 295238; | |
DIP | 103287E; 103288E; 103289E; 103290E; 104118E; 177019E; 177020E; | |
MINT | MINT-7297026; MINT-7297041; MINT-7297055; MINT-7297083; MINT-7297101; MINT-7297122; MINT-7297142; MINT-7297159; MINT-7297192; MINT-7297230; MINT-7903394; MINT-7903429; MINT-7903444; MINT-7903461; MINT-7903490; MINT-7903511; MINT-7903524; MINT-7903554; MINT-7903569; MINT-7903594; MINT-7903607; MINT-8088939; MINT-8089021; MINT-8089040; MINT-8089088; | |
HPRD | 00146; 01224; 01818; 02055; 02534; 02559; 02583; 03025; 03245; 03490; 03668; 04078; 04206; 04357; 04424; 04459; 04538; 05021; 05131; 06780; 09417; 10144; 11807; 11876; 12234; 13006; 15100; 16088; 16459; 16460; | |
IntAct | NA | |
Database links | RefSeq | NA |
UniProt | P84243 ; | |
CCDS | P84243; | |
Gene symbol/name | HGNC symbol | H3F3B |
HGNC aliases | NA | |
HGNC name | H3 histone, family 3B (H3.3B); | |
Related H-InvDB links | G-integra ; PPI view ; TACT ; |
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Protein structure information (GTOP) | Last modified : 27-May-2015 |
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Evolutionary information |
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Relationship | Species | Accession number | MGI | Links |
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Orthology | Danio sp. (Zebrafish) | BC045982 | G-integra | |
Orthology | Rattus sp. (Rat) | BC063159 | G-integra | |
Orthology | Bos sp. (Cow) | BC103071 | G-integra | |
Orthology | Tetraodon sp. (Tetraodon) | CR685092 | G-integra | |
Orthology | Pongo sp. (Orangutan) | CR858345 | G-integra | |
Orthology | Mus sp. (Mouse) | ENSMUST00000106454 | G-integra | |
Orthology | Oryzias sp. (Medaka) | ENSORLT00000010884 | G-integra | |
Orthology | Pan sp. (Chimpanzee) | ENSPTRT00000017710 | G-integra | |
Orthology | Takifugu sp. (Fugu) | SINFRUT00000151524 | G-integra | |
Orthology | Macaca sp. (Macaque) | XM_001099829 | G-integra | |
Orthology | Monodelphis sp. (Opossum) | XM_001369353 | G-integra | |
Orthology | Canis sp. (Dog) | XM_853711 | G-integra | |
Orthology | Gallus sp. (Chicken) | Y00392 | G-integra |
Phylogenetic tree [View by ATV] | TNeighbor-joining (phb) |
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Related H-InvDB links | Evola; dN/dS; |
Translation polymorphism (SNP) and microsatellite (STR) information |
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