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Transcript view Locus view G-integra DiseaseInfo Viewer H-ANGEL Evola PPI view Gene Family/Group Hyperlink MS |
H-Inv protein ID: | HIP000049855 | Last modified: | 27-May-2015 |
Definition: | CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein; |
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Coresponding transcript member (s) |
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No. | 1 | |
H-Inv ID | HIT000053852 | |
H-Inv cluster ID | HIX0003480 | |
Accession number | BC052980.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (Q9UFW8) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | Representative transcript; Splicing isoform; | |
Genomic Location | Chromosome | 3 |
Location | 3p11.1 | |
CDS position | 88101100-88108048 | |
Strand | - | |
Gene structure | 3 exons |
No. | 2 | |
H-Inv ID | HIT000097182_03 | |
H-Inv cluster ID | HIX0003480 | |
Accession number | BC042194.2 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (Q9UFW8) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 3 |
Location | 3p11.1 | |
CDS position | 88101165-88106459 | |
Strand | - | |
Gene structure | 1 exons |
No. | 3 | |
H-Inv ID | HIT000243799 | |
H-Inv cluster ID | HIX0003480 | |
Accession number | AJ000258.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (Q9UFW8) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 3 |
Location | 3p11.1 | |
CDS position | 88104564-88107231 | |
Strand | - | |
Gene structure | 3 exons |
No. | 4 | |
H-Inv ID | HIT000267704 | |
H-Inv cluster ID | HIX0003480 | |
Accession number | CR456854.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (Q9UFW8) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 3 |
Location | 3p11.1 | |
CDS position | 88104625-88105126 | |
Strand | - | |
Gene structure | 1 exons |
Protein function information |
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H-Inv protein ID | HIP000049855 | |
Representative H-Inv transcript ID | HIT000053852 | |
H-Inv cluster ID | HIX0003480 | |
Definition | CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (Q9UFW8) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein. | ||
Gene family/group | H-Inv gene family/group ID | NA |
Gene family/group name | NA | |
Evidence motif (InterPro) ID | NA | |
EC number | NA | |
KEGG metabolic pathway | NA | |
Protein-protein interaction (PPI) | No. of interaction | 3 |
Interaction partner(s) | HIP000033751; HIP000044667; HIP000102937; | |
BIND | NA | |
DIP | NA | |
MINT | NA | |
HPRD | NA | |
IntAct | NA | |
Database links | RefSeq | NA |
UniProt | Q9UFW8 ; | |
CCDS | Q9UFW8; | |
Gene symbol/name | HGNC symbol | CGGBP1 |
HGNC aliases | NA | |
HGNC name | CGG triplet repeat binding protein 1; | |
Related H-InvDB links | G-integra ; PPI view ; TACT ; |
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Protein structure information (GTOP) | Last modified : 27-May-2015 |
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Evolutionary information |
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Relationship | Species | Accession number | MGI | Links |
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Orthology | Mus sp. (Mouse) | BC043097 | MGI:2146370 | G-integra |
Orthology | Equus sp. (Horse) | ENSECAT00000005235 | G-integra | |
Orthology | Pongo sp. (Orangutan) | ENSPPYT00000015859 | G-integra | |
Orthology | Rattus sp. (Rat) | XM_001063614 | G-integra | |
Orthology | Macaca sp. (Macaque) | XM_001082501 | G-integra | |
Orthology | Gallus sp. (Chicken) | XM_001232948 | G-integra | |
Orthology | Monodelphis sp. (Opossum) | XM_001363764 | G-integra | |
Orthology | Canis sp. (Dog) | XM_535549 | G-integra | |
Orthology | Bos sp. (Cow) | XM_611424 | G-integra |
Phylogenetic tree [View by ATV] | TNeighbor-joining (phb) |
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Related H-InvDB links | Evola; dN/dS; |
Translation polymorphism (SNP) and microsatellite (STR) information |
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