H-InvDB x AHG DB
Protein view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv protein ID: HIP000082794 Last modified: 27-May-2015
Definition: Similar to Tumor necrosis factor ligand superfamily member 13 isoform gamma proprotein.
[Summery][Full]
[Protein Info][Member][Motif] 
provide location, ID and descriptions of functional motifs (InterPro)[Function] 
provide human-curated functional definition, similarity
category and related evidences;  Gene name; 
HUGO gene symbols; GO term; EC number; pathway information (KEGG)[PTM][Subcellular loc.] 
provide subcellular localization prediction by WolfPSORT, Target P, SOSUI, TMHMM and PTS1[Protein Structure][Evolutionary info.] 
provide orthologs relationships, phylogenic trees and sequence alignments[Polymorphism/repeat] 
provide polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information

Motif information in predicted CDS
ORF

length(248),orf(254:997)
MPASSPFLLAPKGPPGNMGGPVREPALSVALWLSWGAALGAVACAMALLT
QQTELQSLRREVSRLQGTGGPSQNGEGYPWQSLPEQSSDALEAWENGERS
RKRRAVLTQKQKKQHSVLHLVPINATSKDDSDVTEVMWQPALRRGRGLQA
QGYGVRIQDAGVYLLYSQVLFQDVTFTMGQVVSREGQGRQETLFRCIRSM
PSHPDRAYNSCYSAGVFHLHQGDILSVIIPRARAKLNLSPHGTFLGL*
a.a.
length
InterPro Name
length(134), motif(114:247) 134IPR008983Tumour necrosis factor-like domain [Domain]
length(133), motif(115:247) 133IPR008983Tumour necrosis factor-like domain [Domain]
length(132), motif(116:247) 132IPR006052Tumour necrosis factor domain [Domain]
length(131), motif(117:247) 131IPR006052Tumour necrosis factor domain [Domain]
length(101), motif(147:247) 101IPR006052Tumour necrosis factor domain [Domain]
length(17), motif(155:171) 17IPR021184Tumour necrosis factor, conserved site [Conserved_site]